Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77666.t1 | XP_003595973.1 | 99.3 | 307 | 1 | 1 | 1 | 307 | 1 | 306 | 3.20E-179 | 637.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77666.t1 | Q84TE6 | 60.2 | 322 | 102 | 10 | 2 | 305 | 10 | 323 | 3.3e-100 | 366.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77666.t1 | F6KIF1 | 99.3 | 307 | 1 | 1 | 1 | 307 | 1 | 306 | 2.3e-179 | 637.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene77666.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049182 | MS.gene77666 | 0.821342 | 4.25E-53 | -1.69E-46 |
MS.gene050379 | MS.gene77666 | 0.830894 | 2.27E-55 | -1.69E-46 |
MS.gene052053 | MS.gene77666 | 0.800684 | 1.28E-48 | -1.69E-46 |
MS.gene054635 | MS.gene77666 | 0.807728 | 4.39E-50 | -1.69E-46 |
MS.gene057148 | MS.gene77666 | -0.850804 | 1.34E-60 | -1.69E-46 |
MS.gene057472 | MS.gene77666 | 0.827029 | 1.96E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77666.t1 | MTR_2g064470 | 99.349 | 307 | 1 | 1 | 1 | 307 | 1 | 306 | 0.0 | 640 |
MS.gene77666.t1 | MTR_4g108760 | 44.558 | 294 | 127 | 11 | 1 | 262 | 1 | 290 | 2.12e-67 | 214 |
MS.gene77666.t1 | MTR_1g069805 | 47.280 | 239 | 106 | 5 | 7 | 241 | 6 | 228 | 2.26e-67 | 212 |
MS.gene77666.t1 | MTR_6g084430 | 47.982 | 223 | 108 | 4 | 7 | 226 | 1 | 218 | 3.04e-67 | 213 |
MS.gene77666.t1 | MTR_7g097090 | 63.226 | 155 | 48 | 3 | 7 | 157 | 6 | 155 | 4.27e-67 | 211 |
MS.gene77666.t1 | MTR_6g012670 | 51.724 | 203 | 93 | 3 | 10 | 208 | 19 | 220 | 3.91e-65 | 207 |
MS.gene77666.t1 | MTR_7g085260 | 55.276 | 199 | 70 | 7 | 11 | 192 | 17 | 213 | 8.07e-65 | 209 |
MS.gene77666.t1 | MTR_2g078700 | 62.420 | 157 | 54 | 3 | 8 | 159 | 20 | 176 | 1.60e-62 | 202 |
MS.gene77666.t1 | MTR_6g032770 | 53.723 | 188 | 75 | 5 | 11 | 186 | 18 | 205 | 1.91e-61 | 200 |
MS.gene77666.t1 | MTR_3g435150 | 51.741 | 201 | 81 | 5 | 1 | 187 | 1 | 199 | 2.23e-61 | 197 |
MS.gene77666.t1 | MTR_1g008740 | 57.485 | 167 | 62 | 4 | 8 | 168 | 10 | 173 | 1.92e-60 | 196 |
MS.gene77666.t1 | MTR_1g008740 | 57.485 | 167 | 62 | 4 | 8 | 168 | 24 | 187 | 3.11e-60 | 196 |
MS.gene77666.t1 | MTR_3g070030 | 47.768 | 224 | 87 | 7 | 10 | 217 | 18 | 227 | 1.23e-59 | 194 |
MS.gene77666.t1 | MTR_3g109340 | 58.333 | 156 | 56 | 4 | 8 | 158 | 19 | 170 | 9.99e-59 | 192 |
MS.gene77666.t1 | MTR_3g109340 | 58.599 | 157 | 55 | 5 | 8 | 158 | 19 | 171 | 1.18e-57 | 189 |
MS.gene77666.t1 | MTR_2g064090 | 56.098 | 164 | 68 | 2 | 6 | 165 | 1 | 164 | 8.52e-57 | 187 |
MS.gene77666.t1 | MTR_4g036030 | 55.128 | 156 | 60 | 4 | 9 | 158 | 5 | 156 | 1.55e-55 | 184 |
MS.gene77666.t1 | MTR_4g101680 | 54.321 | 162 | 66 | 3 | 9 | 165 | 5 | 163 | 9.85e-55 | 182 |
MS.gene77666.t1 | MTR_1g096430 | 53.165 | 158 | 64 | 4 | 7 | 158 | 3 | 156 | 1.39e-54 | 181 |
MS.gene77666.t1 | MTR_3g116070 | 56.164 | 146 | 59 | 2 | 8 | 148 | 20 | 165 | 2.84e-54 | 181 |
MS.gene77666.t1 | MTR_5g012080 | 42.570 | 249 | 123 | 9 | 1 | 237 | 1 | 241 | 8.12e-54 | 179 |
MS.gene77666.t1 | MTR_5g021710 | 52.532 | 158 | 65 | 4 | 7 | 158 | 4 | 157 | 1.26e-53 | 179 |
MS.gene77666.t1 | MTR_8g076110 | 49.697 | 165 | 75 | 3 | 6 | 165 | 1 | 162 | 2.06e-53 | 177 |
MS.gene77666.t1 | MTR_4g035590 | 52.500 | 160 | 67 | 3 | 4 | 158 | 1 | 156 | 7.96e-53 | 177 |
MS.gene77666.t1 | MTR_7g011130 | 42.424 | 231 | 109 | 7 | 8 | 217 | 16 | 243 | 1.56e-52 | 176 |
MS.gene77666.t1 | MTR_8g024480 | 48.824 | 170 | 74 | 4 | 8 | 164 | 12 | 181 | 6.51e-52 | 176 |
MS.gene77666.t1 | MTR_8g059170 | 35.093 | 322 | 174 | 8 | 6 | 301 | 9 | 321 | 9.84e-52 | 173 |
MS.gene77666.t1 | MTR_3g064580 | 51.744 | 172 | 76 | 3 | 6 | 173 | 1 | 169 | 7.16e-51 | 178 |
MS.gene77666.t1 | MTR_7g085220 | 46.199 | 171 | 78 | 3 | 8 | 164 | 5 | 175 | 1.07e-50 | 171 |
MS.gene77666.t1 | MTR_2g062730 | 50.955 | 157 | 68 | 4 | 8 | 158 | 7 | 160 | 1.84e-50 | 170 |
MS.gene77666.t1 | MTR_7g011120 | 51.190 | 168 | 58 | 4 | 8 | 158 | 5 | 165 | 3.41e-50 | 169 |
MS.gene77666.t1 | MTR_2g079990 | 49.398 | 166 | 74 | 4 | 6 | 166 | 11 | 171 | 5.76e-50 | 169 |
MS.gene77666.t1 | MTR_5g041940 | 49.351 | 154 | 73 | 3 | 10 | 158 | 2 | 155 | 2.54e-49 | 165 |
MS.gene77666.t1 | MTR_6g477900 | 47.953 | 171 | 84 | 3 | 6 | 172 | 1 | 170 | 3.52e-49 | 164 |
MS.gene77666.t1 | MTR_7g100990 | 51.572 | 159 | 62 | 4 | 8 | 155 | 8 | 162 | 4.34e-49 | 166 |
MS.gene77666.t1 | MTR_2157s0010 | 38.710 | 248 | 127 | 8 | 4 | 238 | 1 | 236 | 9.34e-49 | 164 |
MS.gene77666.t1 | MTR_5g076850 | 48.087 | 183 | 87 | 4 | 6 | 184 | 1 | 179 | 1.75e-48 | 171 |
MS.gene77666.t1 | MTR_3g088110 | 40.476 | 252 | 116 | 7 | 8 | 227 | 4 | 253 | 2.29e-48 | 163 |
MS.gene77666.t1 | MTR_4g081870 | 47.799 | 159 | 78 | 3 | 5 | 158 | 3 | 161 | 2.87e-48 | 162 |
MS.gene77666.t1 | MTR_2g080010 | 48.485 | 165 | 71 | 4 | 8 | 158 | 12 | 176 | 5.16e-48 | 164 |
MS.gene77666.t1 | MTR_8g094580 | 41.048 | 229 | 112 | 7 | 10 | 225 | 6 | 224 | 5.66e-48 | 162 |
MS.gene77666.t1 | MTR_7g005280 | 46.196 | 184 | 74 | 6 | 8 | 175 | 12 | 186 | 2.00e-47 | 160 |
MS.gene77666.t1 | MTR_4g089135 | 43.979 | 191 | 81 | 4 | 11 | 175 | 15 | 205 | 2.61e-47 | 162 |
MS.gene77666.t1 | MTR_6g011860 | 49.390 | 164 | 72 | 4 | 11 | 163 | 15 | 178 | 1.99e-46 | 161 |
MS.gene77666.t1 | MTR_2g079990 | 43.158 | 190 | 78 | 4 | 6 | 166 | 11 | 199 | 2.90e-46 | 160 |
MS.gene77666.t1 | MTR_3g070040 | 43.556 | 225 | 97 | 7 | 8 | 217 | 5 | 214 | 2.95e-46 | 159 |
MS.gene77666.t1 | MTR_2g093810 | 48.026 | 152 | 72 | 3 | 11 | 155 | 14 | 165 | 1.99e-45 | 157 |
MS.gene77666.t1 | MTR_8g467490 | 46.199 | 171 | 80 | 4 | 7 | 165 | 10 | 180 | 1.42e-44 | 156 |
MS.gene77666.t1 | MTR_3g096920 | 50.314 | 159 | 74 | 4 | 8 | 162 | 4 | 161 | 1.67e-44 | 153 |
MS.gene77666.t1 | MTR_5g069030 | 49.689 | 161 | 66 | 4 | 10 | 161 | 24 | 178 | 1.21e-43 | 158 |
MS.gene77666.t1 | MTR_5g040420 | 45.087 | 173 | 84 | 4 | 7 | 168 | 10 | 182 | 1.28e-43 | 154 |
MS.gene77666.t1 | MTR_3g093050 | 48.750 | 160 | 67 | 4 | 11 | 161 | 22 | 175 | 1.88e-42 | 154 |
MS.gene77666.t1 | MTR_3g096140 | 49.383 | 162 | 68 | 6 | 6 | 158 | 1 | 157 | 2.00e-42 | 147 |
MS.gene77666.t1 | MTR_2g068920 | 36.508 | 252 | 130 | 7 | 13 | 234 | 23 | 274 | 2.75e-42 | 147 |
MS.gene77666.t1 | MTR_3g093050 | 48.750 | 160 | 67 | 4 | 11 | 161 | 22 | 175 | 3.64e-42 | 154 |
MS.gene77666.t1 | MTR_5g014300 | 47.024 | 168 | 74 | 4 | 6 | 162 | 1 | 164 | 5.65e-42 | 148 |
MS.gene77666.t1 | MTR_3g096140 | 49.383 | 162 | 68 | 6 | 6 | 158 | 1 | 157 | 8.54e-42 | 148 |
MS.gene77666.t1 | MTR_0036s0150 | 48.701 | 154 | 68 | 4 | 13 | 159 | 7 | 156 | 3.60e-41 | 150 |
MS.gene77666.t1 | MTR_2g068880 | 38.174 | 241 | 109 | 8 | 13 | 225 | 24 | 252 | 4.19e-41 | 145 |
MS.gene77666.t1 | MTR_4g134460 | 38.306 | 248 | 130 | 7 | 13 | 251 | 56 | 289 | 4.50e-41 | 148 |
MS.gene77666.t1 | MTR_3g093040 | 39.437 | 213 | 111 | 8 | 1 | 204 | 100 | 303 | 6.96e-41 | 144 |
MS.gene77666.t1 | MTR_1g090723 | 49.342 | 152 | 69 | 4 | 13 | 158 | 10 | 159 | 9.16e-41 | 150 |
MS.gene77666.t1 | MTR_4g098630 | 47.953 | 171 | 74 | 6 | 6 | 164 | 1 | 168 | 1.54e-40 | 144 |
MS.gene77666.t1 | MTR_5g090970 | 40.094 | 212 | 93 | 6 | 13 | 195 | 20 | 226 | 1.63e-40 | 143 |
MS.gene77666.t1 | MTR_3g096920 | 55.814 | 129 | 54 | 3 | 8 | 134 | 4 | 131 | 3.65e-40 | 143 |
MS.gene77666.t1 | MTR_1g090720 | 47.826 | 161 | 69 | 4 | 11 | 159 | 42 | 199 | 6.30e-40 | 145 |
MS.gene77666.t1 | MTR_1g090723 | 48.026 | 152 | 70 | 4 | 13 | 158 | 10 | 158 | 2.08e-39 | 146 |
MS.gene77666.t1 | MTR_1g090723 | 47.712 | 153 | 71 | 4 | 13 | 159 | 10 | 159 | 2.33e-39 | 145 |
MS.gene77666.t1 | MTR_5g090970 | 39.623 | 212 | 93 | 7 | 13 | 195 | 20 | 225 | 4.61e-38 | 137 |
MS.gene77666.t1 | MTR_8g063550 | 43.671 | 158 | 82 | 4 | 6 | 158 | 1 | 156 | 6.61e-38 | 137 |
MS.gene77666.t1 | MTR_8g063550 | 43.671 | 158 | 82 | 4 | 6 | 158 | 1 | 156 | 1.05e-37 | 139 |
MS.gene77666.t1 | MTR_8g063550 | 43.671 | 158 | 82 | 4 | 6 | 158 | 1 | 156 | 1.34e-37 | 139 |
MS.gene77666.t1 | MTR_8g093580 | 42.767 | 159 | 82 | 4 | 6 | 158 | 1 | 156 | 1.49e-36 | 137 |
MS.gene77666.t1 | MTR_4g075980 | 43.373 | 166 | 78 | 5 | 1 | 158 | 4 | 161 | 1.98e-36 | 132 |
MS.gene77666.t1 | MTR_2g086880 | 42.675 | 157 | 79 | 4 | 2 | 155 | 9 | 157 | 3.30e-36 | 136 |
MS.gene77666.t1 | MTR_1g097300 | 51.181 | 127 | 58 | 3 | 13 | 135 | 21 | 147 | 3.58e-36 | 137 |
MS.gene77666.t1 | MTR_2g086880 | 42.675 | 157 | 79 | 4 | 2 | 155 | 9 | 157 | 5.09e-36 | 136 |
MS.gene77666.t1 | MTR_8g023840 | 45.395 | 152 | 69 | 5 | 11 | 155 | 11 | 155 | 1.33e-34 | 130 |
MS.gene77666.t1 | MTR_3g096140 | 45.000 | 140 | 63 | 4 | 28 | 158 | 2 | 136 | 4.00e-33 | 124 |
MS.gene77666.t1 | MTR_3g098810 | 39.877 | 163 | 85 | 5 | 9 | 160 | 12 | 172 | 6.35e-33 | 122 |
MS.gene77666.t1 | MTR_8g099750 | 38.125 | 160 | 89 | 5 | 9 | 160 | 12 | 169 | 1.88e-32 | 120 |
MS.gene77666.t1 | MTR_8g023860 | 43.421 | 152 | 72 | 5 | 11 | 155 | 12 | 156 | 4.02e-32 | 123 |
MS.gene77666.t1 | MTR_8g094580 | 42.236 | 161 | 72 | 6 | 58 | 207 | 2 | 152 | 1.22e-31 | 118 |
MS.gene77666.t1 | MTR_2g086690 | 41.509 | 159 | 76 | 7 | 12 | 156 | 5 | 160 | 2.22e-31 | 118 |
MS.gene77666.t1 | MTR_4g052620 | 38.650 | 163 | 84 | 6 | 7 | 156 | 1 | 160 | 1.77e-30 | 115 |
MS.gene77666.t1 | MTR_3g098810 | 43.182 | 132 | 67 | 4 | 9 | 134 | 12 | 141 | 5.89e-30 | 112 |
MS.gene77666.t1 | MTR_8g023880 | 38.889 | 198 | 88 | 9 | 11 | 187 | 7 | 192 | 7.89e-27 | 106 |
MS.gene77666.t1 | MTR_4g094302 | 33.690 | 187 | 103 | 5 | 1 | 176 | 1 | 177 | 1.72e-26 | 103 |
MS.gene77666.t1 | MTR_8g023930 | 35.955 | 178 | 96 | 7 | 11 | 180 | 24 | 191 | 2.84e-26 | 108 |
MS.gene77666.t1 | MTR_8g023900 | 38.608 | 158 | 80 | 6 | 14 | 161 | 196 | 346 | 3.31e-26 | 108 |
MS.gene77666.t1 | MTR_8g023900 | 36.970 | 165 | 90 | 6 | 2 | 158 | 3 | 161 | 5.51e-26 | 107 |
MS.gene77666.t1 | MTR_4g094302 | 36.429 | 140 | 73 | 4 | 1 | 134 | 1 | 130 | 1.13e-24 | 97.8 |
MS.gene77666.t1 | MTR_7g105170 | 31.792 | 173 | 102 | 5 | 11 | 167 | 4 | 176 | 4.76e-24 | 98.6 |
MS.gene77666.t1 | MTR_7g070140 | 46.914 | 81 | 41 | 1 | 63 | 141 | 18 | 98 | 5.68e-22 | 90.1 |
MS.gene77666.t1 | MTR_8g093790 | 35.882 | 170 | 82 | 8 | 9 | 175 | 8 | 153 | 8.88e-22 | 90.9 |
MS.gene77666.t1 | MTR_3g096400 | 31.217 | 189 | 101 | 7 | 9 | 178 | 5 | 183 | 7.43e-20 | 86.3 |
MS.gene77666.t1 | MTR_7g070150 | 44.776 | 67 | 33 | 1 | 105 | 171 | 8 | 70 | 1.06e-15 | 71.6 |
MS.gene77666.t1 | MTR_7g083330 | 27.684 | 177 | 122 | 4 | 10 | 182 | 17 | 191 | 2.46e-15 | 73.6 |
MS.gene77666.t1 | MTR_7g083370 | 28.966 | 145 | 87 | 5 | 4 | 139 | 3 | 140 | 1.82e-13 | 67.0 |
MS.gene77666.t1 | MTR_7g083360 | 27.972 | 143 | 97 | 4 | 4 | 142 | 3 | 143 | 3.12e-13 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77666.t1 | AT1G56010 | 60.248 | 322 | 102 | 10 | 2 | 305 | 10 | 323 | 2.76e-127 | 366 |
MS.gene77666.t1 | AT3G12977 | 54.839 | 310 | 92 | 11 | 3 | 305 | 10 | 278 | 4.49e-104 | 305 |
MS.gene77666.t1 | AT1G56010 | 58.712 | 264 | 84 | 10 | 58 | 305 | 2 | 256 | 7.68e-94 | 279 |
MS.gene77666.t1 | AT3G12977 | 48.571 | 280 | 85 | 11 | 30 | 305 | 1 | 225 | 5.83e-72 | 222 |
MS.gene77666.t1 | AT5G61430 | 51.464 | 239 | 94 | 7 | 11 | 232 | 16 | 249 | 4.08e-69 | 218 |
MS.gene77666.t1 | AT3G18400 | 62.987 | 154 | 53 | 2 | 7 | 158 | 1 | 152 | 4.19e-68 | 215 |
MS.gene77666.t1 | AT5G07680 | 44.850 | 301 | 136 | 8 | 11 | 298 | 3 | 286 | 2.15e-66 | 211 |
MS.gene77666.t1 | AT5G07680 | 44.850 | 301 | 136 | 8 | 11 | 298 | 17 | 300 | 2.36e-66 | 211 |
MS.gene77666.t1 | AT5G18270 | 60.870 | 161 | 59 | 3 | 11 | 167 | 21 | 181 | 6.37e-65 | 207 |
MS.gene77666.t1 | AT5G18270 | 60.870 | 161 | 59 | 3 | 11 | 167 | 21 | 181 | 6.51e-65 | 207 |
MS.gene77666.t1 | AT5G39610 | 51.643 | 213 | 91 | 5 | 4 | 208 | 9 | 217 | 6.47e-64 | 203 |
MS.gene77666.t1 | AT4G28530 | 57.143 | 175 | 50 | 4 | 7 | 161 | 6 | 175 | 4.42e-63 | 203 |
MS.gene77666.t1 | AT3G04060 | 46.154 | 247 | 117 | 6 | 11 | 243 | 20 | 264 | 3.64e-62 | 201 |
MS.gene77666.t1 | AT1G76420 | 60.000 | 155 | 56 | 3 | 8 | 158 | 19 | 171 | 5.13e-62 | 200 |
MS.gene77666.t1 | AT5G53950 | 61.635 | 159 | 56 | 3 | 11 | 164 | 17 | 175 | 5.85e-61 | 198 |
MS.gene77666.t1 | AT3G29035 | 48.908 | 229 | 95 | 8 | 11 | 220 | 24 | 249 | 7.04e-61 | 196 |
MS.gene77666.t1 | AT3G15170 | 48.230 | 226 | 92 | 5 | 8 | 220 | 17 | 230 | 2.07e-60 | 195 |
MS.gene77666.t1 | AT2G24430 | 59.615 | 156 | 55 | 4 | 8 | 158 | 13 | 165 | 5.03e-60 | 194 |
MS.gene77666.t1 | AT2G24430 | 59.615 | 156 | 55 | 4 | 8 | 158 | 13 | 165 | 5.03e-60 | 194 |
MS.gene77666.t1 | AT1G71930 | 52.439 | 164 | 66 | 5 | 1 | 158 | 1 | 158 | 4.24e-56 | 184 |
MS.gene77666.t1 | AT1G71930 | 52.439 | 164 | 66 | 5 | 1 | 158 | 1 | 158 | 4.24e-56 | 184 |
MS.gene77666.t1 | AT1G12260 | 39.262 | 298 | 133 | 11 | 9 | 270 | 5 | 290 | 1.22e-55 | 184 |
MS.gene77666.t1 | AT2G18060 | 46.465 | 198 | 93 | 5 | 6 | 193 | 4 | 198 | 3.68e-55 | 183 |
MS.gene77666.t1 | AT2G18060 | 46.465 | 198 | 93 | 5 | 6 | 193 | 4 | 198 | 3.68e-55 | 183 |
MS.gene77666.t1 | AT4G36160 | 54.248 | 153 | 62 | 3 | 11 | 158 | 10 | 159 | 2.85e-54 | 181 |
MS.gene77666.t1 | AT4G36160 | 54.248 | 153 | 62 | 3 | 11 | 158 | 10 | 159 | 2.85e-54 | 181 |
MS.gene77666.t1 | AT4G36160 | 54.248 | 153 | 62 | 3 | 11 | 158 | 14 | 163 | 3.28e-54 | 181 |
MS.gene77666.t1 | AT1G12260 | 50.000 | 180 | 76 | 5 | 9 | 178 | 5 | 180 | 3.48e-54 | 181 |
MS.gene77666.t1 | AT5G62380 | 56.410 | 156 | 58 | 4 | 9 | 158 | 5 | 156 | 4.01e-54 | 180 |
MS.gene77666.t1 | AT5G62380 | 56.410 | 156 | 58 | 4 | 9 | 158 | 5 | 156 | 4.01e-54 | 180 |
MS.gene77666.t1 | AT1G62700 | 49.206 | 189 | 80 | 6 | 9 | 191 | 5 | 183 | 3.00e-53 | 179 |
MS.gene77666.t1 | AT1G62700 | 49.206 | 189 | 80 | 6 | 9 | 191 | 5 | 183 | 3.00e-53 | 179 |
MS.gene77666.t1 | AT3G04070 | 50.292 | 171 | 72 | 3 | 9 | 166 | 8 | 178 | 3.02e-53 | 177 |
MS.gene77666.t1 | AT4G10350 | 53.595 | 153 | 65 | 3 | 11 | 158 | 9 | 160 | 3.33e-53 | 177 |
MS.gene77666.t1 | AT3G61910 | 49.704 | 169 | 68 | 4 | 8 | 159 | 8 | 176 | 2.17e-52 | 175 |
MS.gene77666.t1 | AT4G27410 | 52.258 | 155 | 71 | 2 | 6 | 158 | 9 | 162 | 4.42e-52 | 173 |
MS.gene77666.t1 | AT2G46770 | 49.405 | 168 | 68 | 3 | 8 | 158 | 13 | 180 | 5.13e-52 | 175 |
MS.gene77666.t1 | AT1G33280 | 51.875 | 160 | 68 | 3 | 4 | 158 | 1 | 156 | 5.25e-52 | 173 |
MS.gene77666.t1 | AT1G54330 | 56.098 | 164 | 64 | 4 | 6 | 165 | 1 | 160 | 1.76e-51 | 172 |
MS.gene77666.t1 | AT5G66300 | 50.617 | 162 | 69 | 4 | 11 | 165 | 12 | 169 | 4.54e-51 | 170 |
MS.gene77666.t1 | AT3G04070 | 45.989 | 187 | 72 | 3 | 9 | 166 | 8 | 194 | 9.61e-51 | 171 |
MS.gene77666.t1 | AT3G17730 | 52.532 | 158 | 70 | 3 | 6 | 159 | 1 | 157 | 2.00e-50 | 167 |
MS.gene77666.t1 | AT3G15500 | 49.697 | 165 | 73 | 4 | 6 | 165 | 9 | 168 | 9.25e-50 | 168 |
MS.gene77666.t1 | AT1G79580 | 50.955 | 157 | 67 | 4 | 8 | 158 | 14 | 166 | 1.52e-49 | 169 |
MS.gene77666.t1 | AT1G79580 | 50.955 | 157 | 67 | 4 | 8 | 158 | 14 | 166 | 1.52e-49 | 169 |
MS.gene77666.t1 | AT1G79580 | 50.955 | 157 | 67 | 4 | 8 | 158 | 14 | 166 | 1.52e-49 | 169 |
MS.gene77666.t1 | AT1G79580 | 50.955 | 157 | 67 | 4 | 8 | 158 | 14 | 166 | 1.52e-49 | 169 |
MS.gene77666.t1 | AT1G79580 | 50.955 | 157 | 67 | 4 | 8 | 158 | 14 | 166 | 1.52e-49 | 169 |
MS.gene77666.t1 | AT5G17260 | 50.955 | 157 | 73 | 2 | 6 | 158 | 1 | 157 | 2.23e-49 | 171 |
MS.gene77666.t1 | AT1G52890 | 49.697 | 165 | 73 | 4 | 6 | 165 | 9 | 168 | 3.06e-49 | 166 |
MS.gene77666.t1 | AT5G61430 | 50.000 | 190 | 75 | 6 | 58 | 232 | 2 | 186 | 3.35e-49 | 165 |
MS.gene77666.t1 | AT3G03200 | 48.256 | 172 | 84 | 3 | 6 | 173 | 1 | 171 | 5.50e-49 | 170 |
MS.gene77666.t1 | AT1G32770 | 38.934 | 244 | 127 | 8 | 8 | 229 | 13 | 256 | 7.74e-49 | 166 |
MS.gene77666.t1 | AT1G65910 | 52.229 | 157 | 70 | 3 | 6 | 158 | 1 | 156 | 2.07e-48 | 171 |
MS.gene77666.t1 | AT4G27410 | 47.093 | 172 | 71 | 3 | 6 | 158 | 9 | 179 | 1.26e-47 | 162 |
MS.gene77666.t1 | AT4G35580 | 51.497 | 167 | 64 | 5 | 1 | 158 | 1 | 159 | 1.27e-47 | 167 |
MS.gene77666.t1 | AT1G01720 | 38.760 | 258 | 125 | 8 | 10 | 243 | 6 | 254 | 1.33e-47 | 161 |
MS.gene77666.t1 | AT4G35580 | 51.497 | 167 | 64 | 5 | 1 | 158 | 1 | 159 | 1.45e-47 | 167 |
MS.gene77666.t1 | AT1G61110 | 45.405 | 185 | 78 | 6 | 2 | 169 | 7 | 185 | 1.47e-47 | 162 |
MS.gene77666.t1 | AT4G35580 | 51.497 | 167 | 64 | 5 | 1 | 158 | 1 | 159 | 1.49e-47 | 167 |
MS.gene77666.t1 | AT1G69490 | 47.799 | 159 | 72 | 3 | 8 | 158 | 6 | 161 | 1.24e-46 | 158 |
MS.gene77666.t1 | AT5G08790 | 48.408 | 157 | 74 | 3 | 8 | 158 | 4 | 159 | 7.25e-46 | 157 |
MS.gene77666.t1 | AT5G63790 | 48.101 | 158 | 75 | 3 | 7 | 158 | 46 | 202 | 2.57e-45 | 156 |
MS.gene77666.t1 | AT5G63790 | 48.101 | 158 | 75 | 3 | 7 | 158 | 56 | 212 | 2.57e-45 | 156 |
MS.gene77666.t1 | AT3G10490 | 50.602 | 166 | 75 | 4 | 7 | 168 | 23 | 185 | 3.37e-45 | 154 |
MS.gene77666.t1 | AT1G77450 | 47.468 | 158 | 78 | 3 | 5 | 158 | 4 | 160 | 4.54e-45 | 154 |
MS.gene77666.t1 | AT5G39820 | 44.149 | 188 | 81 | 6 | 2 | 165 | 11 | 198 | 5.75e-45 | 156 |
MS.gene77666.t1 | AT3G10480 | 47.027 | 185 | 84 | 5 | 11 | 184 | 27 | 208 | 2.77e-44 | 157 |
MS.gene77666.t1 | AT5G46590 | 47.561 | 164 | 80 | 4 | 6 | 164 | 1 | 163 | 7.95e-44 | 152 |
MS.gene77666.t1 | AT3G10490 | 51.592 | 157 | 72 | 3 | 7 | 159 | 23 | 179 | 9.57e-44 | 155 |
MS.gene77666.t1 | AT1G26870 | 41.584 | 202 | 77 | 5 | 7 | 190 | 12 | 190 | 2.08e-43 | 154 |
MS.gene77666.t1 | AT5G13180 | 45.029 | 171 | 74 | 6 | 1 | 160 | 1 | 162 | 2.09e-43 | 149 |
MS.gene77666.t1 | AT2G33480 | 49.020 | 153 | 72 | 4 | 10 | 160 | 14 | 162 | 3.56e-43 | 149 |
MS.gene77666.t1 | AT2G43000 | 42.703 | 185 | 100 | 3 | 8 | 187 | 16 | 199 | 4.01e-43 | 149 |
MS.gene77666.t1 | AT2G33480 | 49.673 | 153 | 69 | 4 | 10 | 160 | 14 | 160 | 4.14e-43 | 149 |
MS.gene77666.t1 | AT3G10480 | 47.027 | 185 | 83 | 6 | 11 | 184 | 27 | 207 | 4.73e-43 | 153 |
MS.gene77666.t1 | AT5G04410 | 50.327 | 153 | 71 | 4 | 11 | 159 | 9 | 160 | 6.72e-43 | 155 |
MS.gene77666.t1 | AT3G15510 | 47.170 | 159 | 70 | 4 | 15 | 159 | 21 | 179 | 8.06e-43 | 151 |
MS.gene77666.t1 | AT1G32510 | 47.368 | 171 | 79 | 3 | 6 | 165 | 1 | 171 | 8.84e-43 | 149 |
MS.gene77666.t1 | AT3G10500 | 49.673 | 153 | 72 | 4 | 11 | 159 | 9 | 160 | 9.92e-43 | 154 |
MS.gene77666.t1 | AT1G33060 | 47.799 | 159 | 64 | 4 | 11 | 158 | 24 | 174 | 1.65e-42 | 155 |
MS.gene77666.t1 | AT1G33060 | 47.799 | 159 | 64 | 4 | 11 | 158 | 24 | 174 | 1.79e-42 | 155 |
MS.gene77666.t1 | AT4G17980 | 44.149 | 188 | 91 | 5 | 6 | 179 | 1 | 188 | 2.48e-42 | 147 |
MS.gene77666.t1 | AT4G17980 | 44.149 | 188 | 91 | 5 | 6 | 179 | 1 | 188 | 3.28e-42 | 147 |
MS.gene77666.t1 | AT2G02450 | 48.993 | 149 | 70 | 4 | 13 | 158 | 53 | 198 | 1.28e-41 | 148 |
MS.gene77666.t1 | AT2G02450 | 49.660 | 147 | 68 | 4 | 13 | 156 | 53 | 196 | 1.33e-41 | 149 |
MS.gene77666.t1 | AT5G46590 | 50.746 | 134 | 61 | 3 | 6 | 134 | 1 | 134 | 2.42e-41 | 145 |
MS.gene77666.t1 | AT1G52880 | 46.108 | 167 | 71 | 4 | 15 | 165 | 21 | 184 | 1.40e-40 | 144 |
MS.gene77666.t1 | AT3G10480 | 41.284 | 218 | 81 | 6 | 11 | 184 | 27 | 241 | 1.78e-40 | 148 |
MS.gene77666.t1 | AT5G24590 | 44.324 | 185 | 94 | 6 | 9 | 186 | 11 | 193 | 1.19e-39 | 144 |
MS.gene77666.t1 | AT2G17040 | 45.695 | 151 | 71 | 3 | 13 | 158 | 8 | 152 | 1.42e-37 | 135 |
MS.gene77666.t1 | AT3G12910 | 45.062 | 162 | 70 | 5 | 13 | 156 | 23 | 183 | 3.42e-37 | 134 |
MS.gene77666.t1 | AT4G28530 | 42.197 | 173 | 42 | 4 | 7 | 161 | 6 | 138 | 5.07e-37 | 134 |
MS.gene77666.t1 | AT5G09330 | 41.139 | 158 | 88 | 3 | 6 | 159 | 1 | 157 | 1.58e-36 | 137 |
MS.gene77666.t1 | AT5G09330 | 41.139 | 158 | 88 | 3 | 6 | 159 | 1 | 157 | 1.58e-36 | 137 |
MS.gene77666.t1 | AT5G09330 | 41.139 | 158 | 88 | 3 | 6 | 159 | 1 | 157 | 1.58e-36 | 137 |
MS.gene77666.t1 | AT5G09330 | 41.139 | 158 | 88 | 3 | 6 | 159 | 1 | 157 | 1.58e-36 | 137 |
MS.gene77666.t1 | AT5G09330 | 41.139 | 158 | 88 | 3 | 6 | 159 | 1 | 157 | 1.58e-36 | 137 |
MS.gene77666.t1 | AT3G49530 | 43.312 | 157 | 83 | 5 | 11 | 162 | 13 | 168 | 1.86e-36 | 135 |
MS.gene77666.t1 | AT2G27300 | 40.000 | 180 | 93 | 6 | 2 | 175 | 5 | 175 | 2.00e-36 | 133 |
MS.gene77666.t1 | AT3G49530 | 43.312 | 157 | 83 | 5 | 11 | 162 | 13 | 168 | 5.38e-36 | 135 |
MS.gene77666.t1 | AT1G34180 | 44.079 | 152 | 76 | 4 | 13 | 158 | 18 | 166 | 5.39e-36 | 134 |
MS.gene77666.t1 | AT1G34180 | 43.791 | 153 | 77 | 4 | 13 | 159 | 18 | 167 | 2.00e-35 | 134 |
MS.gene77666.t1 | AT4G10350 | 57.895 | 95 | 39 | 1 | 64 | 158 | 20 | 113 | 8.94e-35 | 128 |
MS.gene77666.t1 | AT1G34190 | 48.031 | 127 | 62 | 2 | 13 | 135 | 18 | 144 | 1.41e-34 | 132 |
MS.gene77666.t1 | AT5G64060 | 40.506 | 158 | 89 | 3 | 6 | 159 | 1 | 157 | 2.12e-34 | 128 |
MS.gene77666.t1 | AT1G34180 | 41.463 | 164 | 75 | 5 | 13 | 158 | 18 | 178 | 4.59e-34 | 129 |
MS.gene77666.t1 | AT1G34180 | 41.212 | 165 | 76 | 5 | 13 | 159 | 18 | 179 | 1.33e-33 | 129 |
MS.gene77666.t1 | AT5G22290 | 39.375 | 160 | 86 | 4 | 5 | 161 | 15 | 166 | 3.21e-33 | 125 |
MS.gene77666.t1 | AT3G44290 | 41.096 | 146 | 75 | 3 | 13 | 155 | 16 | 153 | 2.44e-32 | 120 |
MS.gene77666.t1 | AT3G44290 | 41.096 | 146 | 75 | 3 | 13 | 155 | 16 | 153 | 1.61e-31 | 120 |
MS.gene77666.t1 | AT1G32870 | 41.143 | 175 | 94 | 4 | 3 | 173 | 2 | 171 | 6.05e-31 | 122 |
MS.gene77666.t1 | AT1G32870 | 41.143 | 175 | 94 | 4 | 3 | 173 | 2 | 171 | 6.99e-31 | 121 |
MS.gene77666.t1 | AT1G32870 | 41.143 | 175 | 94 | 4 | 3 | 173 | 38 | 207 | 1.09e-30 | 121 |
MS.gene77666.t1 | AT5G04395 | 41.216 | 148 | 69 | 3 | 5 | 134 | 22 | 169 | 2.05e-29 | 111 |
MS.gene77666.t1 | AT2G33480 | 50.515 | 97 | 47 | 1 | 64 | 160 | 10 | 105 | 5.54e-28 | 108 |
MS.gene77666.t1 | AT1G02230 | 31.064 | 235 | 143 | 6 | 12 | 237 | 4 | 228 | 2.56e-27 | 109 |
MS.gene77666.t1 | AT3G04420 | 32.474 | 194 | 115 | 5 | 12 | 197 | 4 | 189 | 8.54e-25 | 101 |
MS.gene77666.t1 | AT5G22380 | 37.908 | 153 | 85 | 6 | 14 | 156 | 8 | 160 | 9.31e-25 | 100 |
MS.gene77666.t1 | AT2G18060 | 43.750 | 112 | 55 | 3 | 87 | 193 | 2 | 110 | 2.44e-24 | 100 |
MS.gene77666.t1 | AT3G04420 | 30.000 | 240 | 137 | 8 | 12 | 233 | 4 | 230 | 2.45e-24 | 101 |
MS.gene77666.t1 | AT3G44350 | 34.177 | 158 | 96 | 4 | 10 | 159 | 4 | 161 | 3.12e-24 | 99.0 |
MS.gene77666.t1 | AT4G01520 | 34.659 | 176 | 93 | 8 | 10 | 171 | 3 | 170 | 2.81e-23 | 97.8 |
MS.gene77666.t1 | AT4G01550 | 36.306 | 157 | 84 | 7 | 14 | 161 | 7 | 156 | 5.47e-23 | 99.0 |
MS.gene77666.t1 | AT5G64530 | 38.462 | 130 | 60 | 5 | 11 | 134 | 3 | 118 | 1.38e-22 | 92.4 |
MS.gene77666.t1 | AT5G64530 | 33.526 | 173 | 72 | 7 | 11 | 159 | 3 | 156 | 2.07e-22 | 92.8 |
MS.gene77666.t1 | AT3G10490 | 56.410 | 78 | 34 | 0 | 82 | 159 | 2 | 79 | 3.15e-22 | 95.5 |
MS.gene77666.t1 | AT3G10490 | 56.410 | 78 | 34 | 0 | 82 | 159 | 2 | 79 | 3.15e-22 | 95.5 |
MS.gene77666.t1 | AT3G44350 | 37.879 | 132 | 74 | 4 | 10 | 133 | 4 | 135 | 3.56e-22 | 91.3 |
MS.gene77666.t1 | AT4G01540 | 33.526 | 173 | 91 | 8 | 14 | 171 | 7 | 170 | 4.99e-22 | 95.5 |
MS.gene77666.t1 | AT4G01540 | 33.526 | 173 | 91 | 8 | 14 | 171 | 7 | 170 | 8.18e-22 | 95.1 |
MS.gene77666.t1 | AT4G01540 | 33.526 | 173 | 91 | 8 | 14 | 171 | 7 | 170 | 8.22e-22 | 95.1 |
MS.gene77666.t1 | AT4G01540 | 33.526 | 173 | 91 | 8 | 14 | 171 | 7 | 170 | 1.02e-21 | 95.5 |
MS.gene77666.t1 | AT2G43000 | 39.167 | 120 | 70 | 1 | 71 | 187 | 2 | 121 | 2.71e-21 | 89.7 |
MS.gene77666.t1 | AT1G02250 | 31.925 | 213 | 119 | 10 | 12 | 210 | 4 | 204 | 9.01e-20 | 89.0 |
MS.gene77666.t1 | AT1G02220 | 36.719 | 128 | 70 | 4 | 12 | 132 | 4 | 127 | 1.14e-19 | 89.0 |
MS.gene77666.t1 | AT5G50820 | 36.923 | 130 | 70 | 4 | 10 | 134 | 16 | 138 | 2.53e-18 | 81.6 |
MS.gene77666.t1 | AT1G01010 | 31.447 | 159 | 87 | 6 | 14 | 158 | 6 | 156 | 1.72e-16 | 79.7 |
MS.gene77666.t1 | AT5G14000 | 33.588 | 131 | 81 | 3 | 10 | 136 | 14 | 142 | 2.34e-15 | 72.8 |
MS.gene77666.t1 | AT5G22290 | 44.595 | 74 | 33 | 2 | 88 | 161 | 2 | 67 | 2.21e-14 | 71.6 |
MS.gene77666.t1 | AT5G14000 | 31.788 | 151 | 93 | 5 | 10 | 156 | 14 | 158 | 2.39e-14 | 70.9 |
MS.gene77666.t1 | AT3G56530 | 26.582 | 158 | 106 | 4 | 5 | 156 | 46 | 199 | 4.01e-14 | 72.0 |
MS.gene77666.t1 | AT3G55210 | 27.168 | 173 | 103 | 5 | 1 | 156 | 1 | 167 | 8.06e-14 | 70.9 |
MS.gene77666.t1 | AT3G04430 | 30.201 | 149 | 89 | 4 | 17 | 150 | 6 | 154 | 5.50e-13 | 67.0 |
Find 76 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATCACTTCCAGCATTAA+TGG | 0.146600 | 2.4:+25855460 | MS.gene77666:CDS |
ATTAATGATCAAAACCTAAA+AGG | 0.212913 | 2.4:+25855746 | MS.gene77666:CDS |
TCCTAAAATTTCATCTTCTA+AGG | 0.243571 | 2.4:+25853901 | MS.gene77666:CDS |
GTGCAACTGCATCAGGTTAT+TGG | 0.304123 | 2.4:+25853729 | MS.gene77666:CDS |
TTGTTGGCTAGAGGTAATTT+TGG | 0.309334 | 2.4:-25855608 | None:intergenic |
GTTCCATATTGGTTGTAATA+TGG | 0.321690 | 2.4:-25855586 | None:intergenic |
CAACCATATTACAACCAATA+TGG | 0.321767 | 2.4:+25855583 | MS.gene77666:CDS |
GTAGCCCTGTTGCATATTTA+CGG | 0.328714 | 2.4:-25853697 | None:intergenic |
ACTTGCATTGTTGTTATTGT+TGG | 0.333988 | 2.4:-25855624 | None:intergenic |
AACAACAATGCAAGTACATT+TGG | 0.349859 | 2.4:+25855632 | MS.gene77666:CDS |
CTTCGTAAGGGCACTCTTGT+TGG | 0.373702 | 2.4:+25853779 | MS.gene77666:CDS |
GATAAAGGGTCTAAGCTATA+AGG | 0.378533 | 2.4:-25855662 | None:intergenic |
GGTTGTAGATTGGGTTGGTT+TGG | 0.395494 | 2.4:-25855565 | None:intergenic |
TTGTAATATGGTTGTAGATT+GGG | 0.402170 | 2.4:-25855574 | None:intergenic |
AGAGACCGTAAATATGCAAC+AGG | 0.409929 | 2.4:+25853692 | MS.gene77666:CDS |
TTGTGTATATACAGGAAGAT+TGG | 0.410383 | 2.4:+25855354 | MS.gene77666:intron |
TGTGTATATACAGGAAGATT+GGG | 0.427064 | 2.4:+25855355 | MS.gene77666:intron |
GTTGTAATATGGTTGTAGAT+TGG | 0.429160 | 2.4:-25855575 | None:intergenic |
TGTGAGCCATGGGATATTCC+TGG | 0.431452 | 2.4:+25850748 | MS.gene77666:CDS |
TTTGAGTCAACTATCAAAGA+TGG | 0.431620 | 2.4:+25855712 | MS.gene77666:CDS |
TTGAGAAAACATGGAGAAGC+AGG | 0.435570 | 2.4:-25855540 | None:intergenic |
TTAATGATCAAAACCTAAAA+GGG | 0.436538 | 2.4:+25855747 | MS.gene77666:CDS |
CCCATGGCTCACACTTGTTA+AGG | 0.440925 | 2.4:-25850738 | None:intergenic |
ACAAATCGTGCAACTGCATC+AGG | 0.442887 | 2.4:+25853722 | MS.gene77666:CDS |
CTTGCTCATATTCATCTGTA+TGG | 0.443475 | 2.4:-25855514 | None:intergenic |
ATGCATGAGTTTCGTATTGA+GGG | 0.459420 | 2.4:+25853866 | MS.gene77666:CDS |
TCAGGTTATTGGAAGGCAAC+AGG | 0.459668 | 2.4:+25853740 | MS.gene77666:CDS |
ATCAAGGAAGGGCACCTAAA+GGG | 0.466310 | 2.4:+25853825 | MS.gene77666:CDS |
AAGACTTTAGTGTTCTATCA+AGG | 0.477018 | 2.4:+25853809 | MS.gene77666:CDS |
TATGCATGAGTTTCGTATTG+AGG | 0.481434 | 2.4:+25853865 | MS.gene77666:CDS |
GTCAACATCAATCATGAGAA+AGG | 0.483380 | 2.4:-25850716 | None:intergenic |
TGCTACAAAACCTCCAAGCA+TGG | 0.497760 | 2.4:+25855412 | MS.gene77666:CDS |
TGAGAGTTACTTATCTGAAG+TGG | 0.505837 | 2.4:+25855799 | MS.gene77666:CDS |
CATCTGTATGGAATTGAGCT+TGG | 0.508894 | 2.4:-25855502 | None:intergenic |
AAAGGGTCATCACCAAGCTT+AGG | 0.523339 | 2.4:+25855764 | MS.gene77666:CDS |
TTTCGTATTGAGGGTCCTCA+TGG | 0.526305 | 2.4:+25853875 | MS.gene77666:CDS |
CTTTAGTGTTCTATCAAGGA+AGG | 0.528388 | 2.4:+25853813 | MS.gene77666:CDS |
AACAATGCAAGTACATTTGG+AGG | 0.528454 | 2.4:+25855635 | MS.gene77666:CDS |
GGACAGAGCTATCCTTCGTA+AGG | 0.530042 | 2.4:+25853766 | MS.gene77666:CDS |
ATGTAAGAATCCATTAATGC+TGG | 0.533005 | 2.4:-25855470 | None:intergenic |
TCATAGCAACTACCCATGCT+TGG | 0.533828 | 2.4:-25855425 | None:intergenic |
TATCAAGGAAGGGCACCTAA+AGG | 0.534747 | 2.4:+25853824 | MS.gene77666:CDS |
GAACTTCCTTCACCTAAGCT+TGG | 0.537127 | 2.4:-25855776 | None:intergenic |
CCTTAACAAGTGTGAGCCAT+GGG | 0.539747 | 2.4:+25850738 | MS.gene77666:CDS |
CACACAAGCTCTTCATCTCT+AGG | 0.541777 | 2.4:-25850658 | None:intergenic |
TAGCAACTACCCATGCTTGG+AGG | 0.547765 | 2.4:-25855422 | None:intergenic |
GAGAGTTACTTATCTGAAGT+GGG | 0.548125 | 2.4:+25855800 | MS.gene77666:CDS |
AATATGGTTGTAGATTGGGT+TGG | 0.565125 | 2.4:-25855570 | None:intergenic |
TTAGAAATTGTTCCACATGT+GGG | 0.570954 | 2.4:-25855828 | None:intergenic |
TAGAAATTGTTCCACATGTG+GGG | 0.571008 | 2.4:-25855827 | None:intergenic |
GAGCAACATAAGCATGGTTG+AGG | 0.572138 | 2.4:+25850606 | MS.gene77666:CDS |
ATTAGAAATTGTTCCACATG+TGG | 0.572291 | 2.4:-25855829 | None:intergenic |
ACCTTAACAAGTGTGAGCCA+TGG | 0.592225 | 2.4:+25850737 | MS.gene77666:CDS |
GCTACAAAACCTCCAAGCAT+GGG | 0.600781 | 2.4:+25855413 | MS.gene77666:CDS |
GTTGAGGCAAAGCTACCACC+AGG | 0.601916 | 2.4:+25850622 | MS.gene77666:CDS |
GTGTGATTACTTGATGAAGA+AGG | 0.603211 | 2.4:+25850678 | MS.gene77666:CDS |
CATGTGTGGGAGGGAAAGAG+TGG | 0.608228 | 2.4:+25853654 | MS.gene77666:CDS |
CAGAAGCAGCATGTGTGGGA+GGG | 0.608897 | 2.4:+25853645 | MS.gene77666:intron |
TTTAGTGTTCTATCAAGGAA+GGG | 0.615096 | 2.4:+25853814 | MS.gene77666:CDS |
TTATTGGAAGGCAACAGGAA+AGG | 0.621123 | 2.4:+25853745 | MS.gene77666:CDS |
TACTAACCAGGAATATCCCA+TGG | 0.624451 | 2.4:-25850754 | None:intergenic |
TCATCACCAAGCTTAGGTGA+AGG | 0.632923 | 2.4:+25855770 | MS.gene77666:CDS |
AACTGCATCAGGTTATTGGA+AGG | 0.632925 | 2.4:+25853733 | MS.gene77666:CDS |
GACAGAGCTATCCTTCGTAA+GGG | 0.632999 | 2.4:+25853767 | MS.gene77666:CDS |
TTGTTGTTATTGTTGGCTAG+AGG | 0.638919 | 2.4:-25855617 | None:intergenic |
TGAGAAAACATGGAGAAGCA+GGG | 0.639023 | 2.4:-25855539 | None:intergenic |
TGGTGCAGAAGCAGCATGTG+TGG | 0.642823 | 2.4:+25853640 | MS.gene77666:intron |
GCAGAAGCAGCATGTGTGGG+AGG | 0.644425 | 2.4:+25853644 | MS.gene77666:intron |
CTAGGATGAAATCTGAACCC+TGG | 0.649291 | 2.4:-25850640 | None:intergenic |
CAACAAGAGTGCCCTTACGA+AGG | 0.654867 | 2.4:-25853778 | None:intergenic |
GGTAGTTGCTATGATGACAC+AGG | 0.669164 | 2.4:+25855434 | MS.gene77666:CDS |
AAGTGGGTATGCCCCACATG+TGG | 0.670092 | 2.4:+25855816 | MS.gene77666:CDS |
GGTGCAGAAGCAGCATGTGT+GGG | 0.686440 | 2.4:+25853641 | MS.gene77666:intron |
GGATGAAATCTGAACCCTGG+TGG | 0.692300 | 2.4:-25850637 | None:intergenic |
GAGACCGTAAATATGCAACA+GGG | 0.752701 | 2.4:+25853693 | MS.gene77666:CDS |
TTGAGGCAAAGCTACCACCA+GGG | 0.776299 | 2.4:+25850623 | MS.gene77666:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAATAAATAAAAAAATAT+TGG | + | chr2.4:25851793-25851812 | MS.gene77666:intron | 0.0% |
!!! | ATTTTTTTATAAATAAATAA+TGG | - | chr2.4:25851890-25851909 | None:intergenic | 0.0% |
!! | ATAAAATAGATAATTATCAT+AGG | + | chr2.4:25854298-25854317 | MS.gene77666:intron | 10.0% |
!! | ATAATCCTATAAAAAAATTA+AGG | - | chr2.4:25854258-25854277 | None:intergenic | 10.0% |
!! | ATAGTTATTAAAATAAACTA+GGG | + | chr2.4:25853578-25853597 | MS.gene77666:intron | 10.0% |
!! | CAAAAAAAATATATATCAAA+TGG | - | chr2.4:25853427-25853446 | None:intergenic | 10.0% |
!! | TATAGTTATTAAAATAAACT+AGG | + | chr2.4:25853577-25853596 | MS.gene77666:intron | 10.0% |
!!! | AACAAATAGTTTTTTTTTAA+AGG | - | chr2.4:25853501-25853520 | None:intergenic | 10.0% |
!!! | ACAAATAGTTTTTTTTTAAA+GGG | - | chr2.4:25853500-25853519 | None:intergenic | 10.0% |
!!! | TCTTTATTAAATTTTGATAA+GGG | + | chr2.4:25851055-25851074 | MS.gene77666:intron | 10.0% |
!!! | TTTTACCTTAATTTTTTTAT+AGG | + | chr2.4:25854250-25854269 | MS.gene77666:intron | 10.0% |
!!! | TTTTTTTAAAAAACTATGTT+TGG | + | chr2.4:25854520-25854539 | MS.gene77666:intron | 10.0% |
!! | AAAGACAGAAAAAATAAATT+TGG | + | chr2.4:25851525-25851544 | MS.gene77666:intron | 15.0% |
!! | AAGATATAAAATAATACAAG+TGG | - | chr2.4:25852719-25852738 | None:intergenic | 15.0% |
!! | ACCATATATGTTAAATTAAA+TGG | + | chr2.4:25855119-25855138 | MS.gene77666:intron | 15.0% |
!! | AGATTGACAAATAAAAATTA+AGG | + | chr2.4:25854709-25854728 | MS.gene77666:intron | 15.0% |
!! | AGTTATTATAGATCAATAAA+AGG | - | chr2.4:25853334-25853353 | None:intergenic | 15.0% |
!! | ATAATTAAAATACAAACACA+TGG | - | chr2.4:25852920-25852939 | None:intergenic | 15.0% |
!! | ATACTTATGATAAAATACAT+TGG | + | chr2.4:25851831-25851850 | MS.gene77666:intron | 15.0% |
!! | ATGTTTATATACATACATAA+GGG | + | chr2.4:25853929-25853948 | MS.gene77666:intron | 15.0% |
!! | CTTAGAAATAAAATTATAGT+TGG | + | chr2.4:25854215-25854234 | MS.gene77666:intron | 15.0% |
!! | TACATACATAAATATGTAAA+TGG | + | chr2.4:25852584-25852603 | MS.gene77666:intron | 15.0% |
!! | TAGTTTATATTATATTCACT+TGG | + | chr2.4:25854020-25854039 | MS.gene77666:intron | 15.0% |
!!! | AAATTTTCTCATAAAGAAAT+AGG | + | chr2.4:25850882-25850901 | MS.gene77666:intron | 15.0% |
!!! | ACCATTTAATTTAACATATA+TGG | - | chr2.4:25855123-25855142 | None:intergenic | 15.0% |
!!! | CTCTTTATTAAATTTTGATA+AGG | + | chr2.4:25851054-25851073 | MS.gene77666:intron | 15.0% |
!!! | GATAAAAAAAAGTATATCAT+CGG | - | chr2.4:25852522-25852541 | None:intergenic | 15.0% |
!!! | GTTAATTTAATTTCCAATTA+AGG | + | chr2.4:25851245-25851264 | MS.gene77666:intron | 15.0% |
!!! | TGTATTATTTTATATCTTCA+AGG | + | chr2.4:25852721-25852740 | MS.gene77666:intron | 15.0% |
!! | AAATGAAAAAGAAACTGTTA+GGG | + | chr2.4:25853016-25853035 | MS.gene77666:intron | 20.0% |
!! | AATATATATCAAATGGAACA+TGG | - | chr2.4:25853420-25853439 | None:intergenic | 20.0% |
!! | ACTATCAAAGTCTTTATAAT+AGG | - | chr2.4:25852117-25852136 | None:intergenic | 20.0% |
!! | AGAATTATCTTTCAAACTAA+TGG | - | chr2.4:25854071-25854090 | None:intergenic | 20.0% |
!! | ATAAAATCCAAAACTAGTTA+TGG | - | chr2.4:25852979-25852998 | None:intergenic | 20.0% |
!! | ATATATATCAAATGGAACAT+GGG | - | chr2.4:25853419-25853438 | None:intergenic | 20.0% |
!! | ATGTGACTTCAAAAATATAT+TGG | + | chr2.4:25854803-25854822 | MS.gene77666:intron | 20.0% |
!! | ATTAATGATCAAAACCTAAA+AGG | + | chr2.4:25855746-25855765 | MS.gene77666:CDS | 20.0% |
!! | CATGTTTATATACATACATA+AGG | + | chr2.4:25853928-25853947 | MS.gene77666:intron | 20.0% |
!! | CTTAGTCTAATTAATGTAAT+GGG | + | chr2.4:25853611-25853630 | MS.gene77666:intron | 20.0% |
!! | CTTTCTAAACACAAATATAA+TGG | - | chr2.4:25852408-25852427 | None:intergenic | 20.0% |
!! | GAAATAAAATTATAGTTGGT+TGG | + | chr2.4:25854219-25854238 | MS.gene77666:intron | 20.0% |
!! | GTTTAATAAAAAATTCAGAG+AGG | - | chr2.4:25854848-25854867 | None:intergenic | 20.0% |
!! | TCTTAGTCTAATTAATGTAA+TGG | + | chr2.4:25853610-25853629 | MS.gene77666:intron | 20.0% |
!! | TGAATGCATAAATATGTAAA+TGG | + | chr2.4:25852618-25852637 | MS.gene77666:intron | 20.0% |
!! | TGTGACTTCAAAAATATATT+GGG | + | chr2.4:25854804-25854823 | MS.gene77666:intron | 20.0% |
!! | TGTTCTAATAATTAAGACAA+AGG | + | chr2.4:25853187-25853206 | MS.gene77666:intron | 20.0% |
!! | TTAATGATCAAAACCTAAAA+GGG | + | chr2.4:25855747-25855766 | MS.gene77666:CDS | 20.0% |
!! | TTATATATGATGATACCAAT+AGG | - | chr2.4:25854614-25854633 | None:intergenic | 20.0% |
!! | TTATCCAATCAAATATCAAA+AGG | - | chr2.4:25854933-25854952 | None:intergenic | 20.0% |
!! | TTATTGCAATCACTAAAAAT+TGG | + | chr2.4:25854106-25854125 | MS.gene77666:intron | 20.0% |
!! | TTCGTTAATTGTTAACTATT+CGG | - | chr2.4:25855220-25855239 | None:intergenic | 20.0% |
!!! | AAATGATTGATACTTGTTAA+CGG | + | chr2.4:25851194-25851213 | MS.gene77666:intron | 20.0% |
!!! | AACAGTAATAATTTTGTTTG+TGG | - | chr2.4:25853171-25853190 | None:intergenic | 20.0% |
!!! | ATTAATGTAATGGGAATATA+TGG | + | chr2.4:25853620-25853639 | MS.gene77666:intron | 20.0% |
!!! | ATTTAATTTCCAATTAAGGT+AGG | + | chr2.4:25851249-25851268 | MS.gene77666:intron | 20.0% |
!!! | GACAAAATTCATCTAAAATT+TGG | - | chr2.4:25851554-25851573 | None:intergenic | 20.0% |
!!! | GGATTTTTTTATATCAACAA+GGG | + | chr2.4:25852836-25852855 | MS.gene77666:intron | 20.0% |
!!! | TCATTTTGCAACATATTTTT+TGG | + | chr2.4:25854638-25854657 | MS.gene77666:intron | 20.0% |
!!! | TGGATTTTTTTATATCAACA+AGG | + | chr2.4:25852835-25852854 | MS.gene77666:intron | 20.0% |
!!! | TTAGGTTTTGATCATTAATA+GGG | - | chr2.4:25855745-25855764 | None:intergenic | 20.0% |
!!! | TTTAATTTGTATGCACAAAT+AGG | - | chr2.4:25852683-25852702 | None:intergenic | 20.0% |
!!! | TTTAGGTTTTGATCATTAAT+AGG | - | chr2.4:25855746-25855765 | None:intergenic | 20.0% |
! | AACATGTCATGTGTATATAA+AGG | - | chr2.4:25850826-25850845 | None:intergenic | 25.0% |
! | AATGAAAAAGAAACTGTTAG+GGG | + | chr2.4:25853017-25853036 | MS.gene77666:intron | 25.0% |
! | ACAGATAATAGAAATAAGTC+AGG | + | chr2.4:25854471-25854490 | MS.gene77666:intron | 25.0% |
! | ACTCATTTGTACTTTATCAA+CGG | - | chr2.4:25850977-25850996 | None:intergenic | 25.0% |
! | AGTATATATCAGTTTCCATT+AGG | - | chr2.4:25851408-25851427 | None:intergenic | 25.0% |
! | AGTTGACAATTTCTTGTAAA+TGG | - | chr2.4:25854575-25854594 | None:intergenic | 25.0% |
! | ATAGCAAACTGAAAAATTGA+TGG | - | chr2.4:25850952-25850971 | None:intergenic | 25.0% |
! | ATATTGTTAATGAGGACAAT+TGG | + | chr2.4:25853259-25853278 | MS.gene77666:intron | 25.0% |
! | ATGTGAATTTAAGTAAGATG+AGG | - | chr2.4:25853366-25853385 | None:intergenic | 25.0% |
! | CATACATAAGGGATTTATAT+TGG | + | chr2.4:25853940-25853959 | MS.gene77666:intron | 25.0% |
! | CATATATAATAGAGATAGGT+AGG | + | chr2.4:25851745-25851764 | MS.gene77666:intron | 25.0% |
! | CTTTATAAAAGCTTCAGTAT+TGG | - | chr2.4:25852893-25852912 | None:intergenic | 25.0% |
! | GAAATGAAAAAGAAACTGTT+AGG | + | chr2.4:25853015-25853034 | MS.gene77666:intron | 25.0% |
! | GTTAAATTGGTTGGAAAATT+CGG | - | chr2.4:25855152-25855171 | None:intergenic | 25.0% |
! | GTTATTCAATCAAAATCGAT+CGG | + | chr2.4:25855014-25855033 | MS.gene77666:intron | 25.0% |
! | GTTTGAACTTAGAGTTAAAT+TGG | - | chr2.4:25855165-25855184 | None:intergenic | 25.0% |
! | TAACATCTACCTATCATAAT+TGG | - | chr2.4:25851460-25851479 | None:intergenic | 25.0% |
! | TATCTCTATTATATATGCCT+GGG | - | chr2.4:25851742-25851761 | None:intergenic | 25.0% |
! | TATTATTAATTCCTAATCCC+AGG | + | chr2.4:25851722-25851741 | MS.gene77666:intron | 25.0% |
! | TCAGGATAATATTGTTAATG+AGG | + | chr2.4:25853251-25853270 | MS.gene77666:intron | 25.0% |
! | TCCTAAAATTTCATCTTCTA+AGG | + | chr2.4:25853901-25853920 | MS.gene77666:CDS | 25.0% |
! | TGATATTTGATTGGATAACT+CGG | + | chr2.4:25854935-25854954 | MS.gene77666:intron | 25.0% |
! | TGCATACAAATTAAATCCAA+TGG | + | chr2.4:25852688-25852707 | MS.gene77666:intron | 25.0% |
! | TGCCATACATTAAAATACAA+AGG | - | chr2.4:25851698-25851717 | None:intergenic | 25.0% |
! | TTAATTGTTAACTATTCGGA+GGG | - | chr2.4:25855216-25855235 | None:intergenic | 25.0% |
! | TTGTAATATGGTTGTAGATT+GGG | - | chr2.4:25855577-25855596 | None:intergenic | 25.0% |
! | TTTCTTTACACTAATCCTAT+TGG | + | chr2.4:25854596-25854615 | MS.gene77666:intron | 25.0% |
! | TTTGGACAAAAATGACTATA+GGG | + | chr2.4:25854538-25854557 | MS.gene77666:intron | 25.0% |
!! | AAGACCTTTTGATATTTGAT+TGG | + | chr2.4:25854926-25854945 | MS.gene77666:intron | 25.0% |
!! | ACCTTAGAAGATGAAATTTT+AGG | - | chr2.4:25853905-25853924 | None:intergenic | 25.0% |
!! | ACTTTTCTATCACATGATAA+AGG | - | chr2.4:25855680-25855699 | None:intergenic | 25.0% |
!! | CACATAGTTGAAATAGTTTT+AGG | - | chr2.4:25853987-25854006 | None:intergenic | 25.0% |
!! | CTTTTCTATCACATGATAAA+GGG | - | chr2.4:25855679-25855698 | None:intergenic | 25.0% |
!! | TACTGAAGCTTTTATAAAGT+AGG | + | chr2.4:25852894-25852913 | MS.gene77666:intron | 25.0% |
!! | TTAGAAGATGAAATTTTAGG+AGG | - | chr2.4:25853902-25853921 | None:intergenic | 25.0% |
!! | TTATCTGTTCTCCTTTAAAA+AGG | - | chr2.4:25854459-25854478 | None:intergenic | 25.0% |
!!! | AGCCTTTGTATTTTAATGTA+TGG | + | chr2.4:25851693-25851712 | MS.gene77666:intron | 25.0% |
!!! | ATTAAGGACTTTTGACTTTT+TGG | + | chr2.4:25854725-25854744 | MS.gene77666:intron | 25.0% |
!!! | GAGTGAAATTTTTTTTTTGC+TGG | - | chr2.4:25852747-25852766 | None:intergenic | 25.0% |
!!! | TAGAAGATGAAATTTTAGGA+GGG | - | chr2.4:25853901-25853920 | None:intergenic | 25.0% |
!!! | TTGTATTTTAATGTATGGCA+TGG | + | chr2.4:25851698-25851717 | MS.gene77666:intron | 25.0% |
!!! | TTTTTTAGGCTTGATATGAT+AGG | + | chr2.4:25852867-25852886 | MS.gene77666:intron | 25.0% |
AACAACAATGCAAGTACATT+TGG | + | chr2.4:25855632-25855651 | MS.gene77666:CDS | 30.0% | |
AAGACTTTAGTGTTCTATCA+AGG | + | chr2.4:25853809-25853828 | MS.gene77666:CDS | 30.0% | |
ATGGAAGAGGATATGTATAT+TGG | + | chr2.4:25853070-25853089 | MS.gene77666:intron | 30.0% | |
ATGTAAGAATCCATTAATGC+TGG | - | chr2.4:25855473-25855492 | None:intergenic | 30.0% | |
CAAAACAAGTGTCATAGTTT+AGG | - | chr2.4:25855302-25855321 | None:intergenic | 30.0% | |
CAAAAGGATTAAGTAAACTC+AGG | + | chr2.4:25853233-25853252 | MS.gene77666:intron | 30.0% | |
CAACCATATTACAACCAATA+TGG | + | chr2.4:25855583-25855602 | MS.gene77666:CDS | 30.0% | |
CACTAAAAATTGGAATGCTT+GGG | + | chr2.4:25854116-25854135 | MS.gene77666:intron | 30.0% | |
CAGGCATATATAATAGAGAT+AGG | + | chr2.4:25851741-25851760 | MS.gene77666:intron | 30.0% | |
CTATCTCTATTATATATGCC+TGG | - | chr2.4:25851743-25851762 | None:intergenic | 30.0% | |
GAACTTAGAGTTAAATTGGT+TGG | - | chr2.4:25855161-25855180 | None:intergenic | 30.0% | |
GCATAATCTTGTGTATATAC+AGG | + | chr2.4:25855346-25855365 | MS.gene77666:intron | 30.0% | |
GTCATGAGCATTTAATCAAA+AGG | + | chr2.4:25853217-25853236 | MS.gene77666:intron | 30.0% | |
GTTAATTGTTAACTATTCGG+AGG | - | chr2.4:25855217-25855236 | None:intergenic | 30.0% | |
GTTCAAGGATCAAAAGATTA+TGG | - | chr2.4:25851329-25851348 | None:intergenic | 30.0% | |
GTTGTAATATGGTTGTAGAT+TGG | - | chr2.4:25855578-25855597 | None:intergenic | 30.0% | |
GTTTGGACAAAAATGACTAT+AGG | + | chr2.4:25854537-25854556 | MS.gene77666:intron | 30.0% | |
TAAAGGGAGAAAAACTGAAT+GGG | + | chr2.4:25853841-25853860 | MS.gene77666:CDS | 30.0% | |
TAGCTACGAAAATTTAGAGA+TGG | - | chr2.4:25851581-25851600 | None:intergenic | 30.0% | |
TATTATATATGCCTGGGATT+AGG | - | chr2.4:25851736-25851755 | None:intergenic | 30.0% | |
TATTTCAACTATGTGCATTG+AGG | + | chr2.4:25853992-25854011 | MS.gene77666:intron | 30.0% | |
TCACTAAAAATTGGAATGCT+TGG | + | chr2.4:25854115-25854134 | MS.gene77666:intron | 30.0% | |
TCAGAATTTGTATCATGTCA+AGG | + | chr2.4:25854145-25854164 | MS.gene77666:intron | 30.0% | |
TCATAGCATTAATACTAACC+AGG | - | chr2.4:25850769-25850788 | None:intergenic | 30.0% | |
TCTTGTAAATGGAAAACCAA+GGG | - | chr2.4:25854564-25854583 | None:intergenic | 30.0% | |
TGATAAATGAAAGAGCCTAA+TGG | + | chr2.4:25851390-25851409 | MS.gene77666:intron | 30.0% | |
TGGAAGAGGATATGTATATT+GGG | + | chr2.4:25853071-25853090 | MS.gene77666:intron | 30.0% | |
TGTGTATATACAGGAAGATT+GGG | + | chr2.4:25855355-25855374 | MS.gene77666:intron | 30.0% | |
TGTTGAGATGTCTTCTAATT+TGG | - | chr2.4:25853046-25853065 | None:intergenic | 30.0% | |
TTAGAAATTGTTCCACATGT+GGG | - | chr2.4:25855831-25855850 | None:intergenic | 30.0% | |
TTCTTGTAAATGGAAAACCA+AGG | - | chr2.4:25854565-25854584 | None:intergenic | 30.0% | |
TTGTGTATATACAGGAAGAT+TGG | + | chr2.4:25855354-25855373 | MS.gene77666:intron | 30.0% | |
TTTAGTGTTCTATCAAGGAA+GGG | + | chr2.4:25853814-25853833 | MS.gene77666:CDS | 30.0% | |
TTTGAGTCAACTATCAAAGA+TGG | + | chr2.4:25855712-25855731 | MS.gene77666:CDS | 30.0% | |
! | AAAGGAATGCATGATAATGA+AGG | - | chr2.4:25850808-25850827 | None:intergenic | 30.0% |
! | AAGGAATGCATGATAATGAA+GGG | - | chr2.4:25850807-25850826 | None:intergenic | 30.0% |
! | ACTTGCATTGTTGTTATTGT+TGG | - | chr2.4:25855627-25855646 | None:intergenic | 30.0% |
! | ATGTGAGACAAATTTGGTTT+CGG | - | chr2.4:25854769-25854788 | None:intergenic | 30.0% |
! | CTTTTGACATGAAAGTAAGA+TGG | - | chr2.4:25852280-25852299 | None:intergenic | 30.0% |
! | GCTTGATCTAACCTTTTTAA+AGG | + | chr2.4:25854445-25854464 | MS.gene77666:intron | 30.0% |
! | GTTCCATATTGGTTGTAATA+TGG | - | chr2.4:25855589-25855608 | None:intergenic | 30.0% |
!! | AATACAAGTGGATTAACCAT+TGG | - | chr2.4:25852707-25852726 | None:intergenic | 30.0% |
!! | AATTTTGTTTGTGGCAAAAC+AGG | - | chr2.4:25853162-25853181 | None:intergenic | 30.0% |
!! | ATTTTGATAAGGGTAGATTG+AGG | + | chr2.4:25851065-25851084 | MS.gene77666:intron | 30.0% |
!! | ATTTTGTTTGTGGCAAAACA+GGG | - | chr2.4:25853161-25853180 | None:intergenic | 30.0% |
!!! | AGGTAATTTTGGTTCCATAT+TGG | - | chr2.4:25855600-25855619 | None:intergenic | 30.0% |
!!! | CAAGGGCAAAATAGTTTTTT+AGG | + | chr2.4:25852853-25852872 | MS.gene77666:intron | 30.0% |
!!! | CCAATCTGCATTTTTTATGT+GGG | + | chr2.4:25851655-25851674 | MS.gene77666:intron | 30.0% |
!!! | TCCAATCTGCATTTTTTATG+TGG | + | chr2.4:25851654-25851673 | MS.gene77666:intron | 30.0% |
AACAATGCAAGTACATTTGG+AGG | + | chr2.4:25855635-25855654 | MS.gene77666:CDS | 35.0% | |
AATATGGTTGTAGATTGGGT+TGG | - | chr2.4:25855573-25855592 | None:intergenic | 35.0% | |
AATTCAGAGAGGATCTACTT+AGG | - | chr2.4:25854837-25854856 | None:intergenic | 35.0% | |
AATTTGTCTCACATGGCTAT+TGG | + | chr2.4:25854775-25854794 | MS.gene77666:intron | 35.0% | |
ACACAAGTATACATGCAGAT+TGG | - | chr2.4:25851120-25851139 | None:intergenic | 35.0% | |
AGAGAGACTTATCATTAGGA+GGG | + | chr2.4:25852318-25852337 | MS.gene77666:intron | 35.0% | |
AGATGGACATAGACTTAGTT+TGG | - | chr2.4:25852263-25852282 | None:intergenic | 35.0% | |
AGTTAATCACGTTCATGTGT+AGG | - | chr2.4:25852185-25852204 | None:intergenic | 35.0% | |
ATAGCCATGTGAGACAAATT+TGG | - | chr2.4:25854775-25854794 | None:intergenic | 35.0% | |
ATCTCAACAATTGATGGAAG+AGG | + | chr2.4:25853057-25853076 | MS.gene77666:intron | 35.0% | |
ATGCATGAGTTTCGTATTGA+GGG | + | chr2.4:25853866-25853885 | MS.gene77666:CDS | 35.0% | |
CACAAGTATACATGCAGATT+GGG | - | chr2.4:25851119-25851138 | None:intergenic | 35.0% | |
CATACCAGGAAAGTAATACA+AGG | - | chr2.4:25854671-25854690 | None:intergenic | 35.0% | |
CCCACATAAAAAATGCAGAT+TGG | - | chr2.4:25851658-25851677 | None:intergenic | 35.0% | |
CTAAAGGGAGAAAAACTGAA+TGG | + | chr2.4:25853840-25853859 | MS.gene77666:CDS | 35.0% | |
CTTGCTCATATTCATCTGTA+TGG | - | chr2.4:25855517-25855536 | None:intergenic | 35.0% | |
CTTTAGTGTTCTATCAAGGA+AGG | + | chr2.4:25853813-25853832 | MS.gene77666:CDS | 35.0% | |
GAAACCAAATTTGTCTCACA+TGG | + | chr2.4:25854768-25854787 | MS.gene77666:intron | 35.0% | |
GAAGACATCTCAACAATTGA+TGG | + | chr2.4:25853051-25853070 | MS.gene77666:intron | 35.0% | |
GATAAAGGGTCTAAGCTATA+AGG | - | chr2.4:25855665-25855684 | None:intergenic | 35.0% | |
GTCAACATCAATCATGAGAA+AGG | - | chr2.4:25850719-25850738 | None:intergenic | 35.0% | |
GTGTGATTACTTGATGAAGA+AGG | + | chr2.4:25850678-25850697 | MS.gene77666:CDS | 35.0% | |
TAACTCTAAGTTCAAACCAG+TGG | + | chr2.4:25855168-25855187 | MS.gene77666:intron | 35.0% | |
TAATAGAGATAGGTAGGTAC+AGG | + | chr2.4:25851751-25851770 | MS.gene77666:intron | 35.0% | |
TACATGCAGATTGGGATTAT+AGG | - | chr2.4:25851111-25851130 | None:intergenic | 35.0% | |
TACTTTCCTGGTATGAATGA+GGG | + | chr2.4:25854676-25854695 | MS.gene77666:intron | 35.0% | |
TAGAAATTGTTCCACATGTG+GGG | - | chr2.4:25855830-25855849 | None:intergenic | 35.0% | |
TATGCATGAGTTTCGTATTG+AGG | + | chr2.4:25853865-25853884 | MS.gene77666:CDS | 35.0% | |
TGACTCGATGACCTTAATAT+GGG | + | chr2.4:25855048-25855067 | MS.gene77666:intron | 35.0% | |
TGAGAGTTACTTATCTGAAG+TGG | + | chr2.4:25855799-25855818 | MS.gene77666:CDS | 35.0% | |
TTACTTTCCTGGTATGAATG+AGG | + | chr2.4:25854675-25854694 | MS.gene77666:intron | 35.0% | |
TTCATCACTTCCAGCATTAA+TGG | + | chr2.4:25855460-25855479 | MS.gene77666:CDS | 35.0% | |
! | AAGTTCTAGCCTACCTTAAT+TGG | - | chr2.4:25851261-25851280 | None:intergenic | 35.0% |
! | CATTCAGTTTTTCTCCCTTT+AGG | - | chr2.4:25853842-25853861 | None:intergenic | 35.0% |
! | CGAGTTTTACATATTGTTGC+TGG | + | chr2.4:25852236-25852255 | MS.gene77666:intron | 35.0% |
! | GAGAGTTACTTATCTGAAGT+GGG | + | chr2.4:25855800-25855819 | MS.gene77666:CDS | 35.0% |
! | GTTTTATATGCATGATCGTG+AGG | + | chr2.4:25852363-25852382 | MS.gene77666:intron | 35.0% |
! | TTGACTCGATGACCTTAATA+TGG | + | chr2.4:25855047-25855066 | MS.gene77666:intron | 35.0% |
! | TTGTTGTTATTGTTGGCTAG+AGG | - | chr2.4:25855620-25855639 | None:intergenic | 35.0% |
!! | ATAGCCTTGTATTACTTTCC+TGG | + | chr2.4:25854664-25854683 | MS.gene77666:intron | 35.0% |
!! | CTAGTCATAGCTTTAACCAT+CGG | - | chr2.4:25851351-25851370 | None:intergenic | 35.0% |
!! | GAAATCGCCATAACTAGTTT+TGG | + | chr2.4:25852969-25852988 | MS.gene77666:intron | 35.0% |
!! | TTGTTGGCTAGAGGTAATTT+TGG | - | chr2.4:25855611-25855630 | None:intergenic | 35.0% |
!!! | GGTTTGGTTTTGAGAAAACA+TGG | - | chr2.4:25855552-25855571 | None:intergenic | 35.0% |
AAAAATGACTATAGGGCCCT+TGG | + | chr2.4:25854545-25854564 | MS.gene77666:intron | 40.0% | |
AACTGCATCAGGTTATTGGA+AGG | + | chr2.4:25853733-25853752 | MS.gene77666:CDS | 40.0% | |
AGAGACCGTAAATATGCAAC+AGG | + | chr2.4:25853692-25853711 | MS.gene77666:CDS | 40.0% | |
ATATACACATACACGCACCA+TGG | + | chr2.4:25851942-25851961 | MS.gene77666:intron | 40.0% | |
ATTCGGAGGGATCTAAAGAA+GGG | - | chr2.4:25855203-25855222 | None:intergenic | 40.0% | |
CATCTGTATGGAATTGAGCT+TGG | - | chr2.4:25855505-25855524 | None:intergenic | 40.0% | |
CTACCTATCATAATTGGTGC+TGG | - | chr2.4:25851454-25851473 | None:intergenic | 40.0% | |
GAAAAAGAAACTGTTAGGGG+TGG | + | chr2.4:25853020-25853039 | MS.gene77666:intron | 40.0% | |
GAACCAGCACCAATTATGAT+AGG | + | chr2.4:25851448-25851467 | MS.gene77666:intron | 40.0% | |
GACTCGATGACCTTAATATG+GGG | + | chr2.4:25855049-25855068 | MS.gene77666:intron | 40.0% | |
GAGACCGTAAATATGCAACA+GGG | + | chr2.4:25853693-25853712 | MS.gene77666:CDS | 40.0% | |
GAGAGAGACTTATCATTAGG+AGG | + | chr2.4:25852317-25852336 | MS.gene77666:intron | 40.0% | |
GCTGAGAGAGACTTATCATT+AGG | + | chr2.4:25852314-25852333 | MS.gene77666:intron | 40.0% | |
GTAGCCCTGTTGCATATTTA+CGG | - | chr2.4:25853700-25853719 | None:intergenic | 40.0% | |
TACTAACCAGGAATATCCCA+TGG | - | chr2.4:25850757-25850776 | None:intergenic | 40.0% | |
TATTCGGAGGGATCTAAAGA+AGG | - | chr2.4:25855204-25855223 | None:intergenic | 40.0% | |
TGAGAAAACATGGAGAAGCA+GGG | - | chr2.4:25855542-25855561 | None:intergenic | 40.0% | |
TTATTGGAAGGCAACAGGAA+AGG | + | chr2.4:25853745-25853764 | MS.gene77666:CDS | 40.0% | |
TTGAGAAAACATGGAGAAGC+AGG | - | chr2.4:25855543-25855562 | None:intergenic | 40.0% | |
! | TCTTTTGATCCTTGAACCGA+TGG | + | chr2.4:25851332-25851351 | MS.gene77666:intron | 40.0% |
!! | AGGAAGATTGGGTTTTGTGT+AGG | + | chr2.4:25855366-25855385 | MS.gene77666:intron | 40.0% |
!! | GGAAGATTGGGTTTTGTGTA+GGG | + | chr2.4:25855367-25855386 | MS.gene77666:intron | 40.0% |
!! | TAATTGGTGCTGGTTCAATG+AGG | - | chr2.4:25851444-25851463 | None:intergenic | 40.0% |
!! | TAGCTTTAACCATCGGTTCA+AGG | - | chr2.4:25851344-25851363 | None:intergenic | 40.0% |
AAAGGGTCATCACCAAGCTT+AGG | + | chr2.4:25855764-25855783 | MS.gene77666:CDS | 45.0% | |
AATCCCACCACCCCATATTA+AGG | - | chr2.4:25855062-25855081 | None:intergenic | 45.0% | |
ACAAATCGTGCAACTGCATC+AGG | + | chr2.4:25853722-25853741 | MS.gene77666:CDS | 45.0% | |
ACATACACGCACCATGGAAA+GGG | + | chr2.4:25851948-25851967 | MS.gene77666:intron | 45.0% | |
ACCTTAACAAGTGTGAGCCA+TGG | + | chr2.4:25850737-25850756 | MS.gene77666:CDS | 45.0% | |
ACTGTCTACATCCCTTTCCA+TGG | - | chr2.4:25851962-25851981 | None:intergenic | 45.0% | |
AGAAGGGACAAATGTTCCAC+TGG | - | chr2.4:25855187-25855206 | None:intergenic | 45.0% | |
ATGACCTTAATATGGGGTGG+TGG | + | chr2.4:25855055-25855074 | MS.gene77666:intron | 45.0% | |
CACACAAGCTCTTCATCTCT+AGG | - | chr2.4:25850661-25850680 | None:intergenic | 45.0% | |
CCTTAACAAGTGTGAGCCAT+GGG | + | chr2.4:25850738-25850757 | MS.gene77666:CDS | 45.0% | |
CTAGGATGAAATCTGAACCC+TGG | - | chr2.4:25850643-25850662 | None:intergenic | 45.0% | |
GAAAGGGATGTAGACAGTTG+AGG | + | chr2.4:25851964-25851983 | MS.gene77666:intron | 45.0% | |
GAACTTCCTTCACCTAAGCT+TGG | - | chr2.4:25855779-25855798 | None:intergenic | 45.0% | |
GACAGAGCTATCCTTCGTAA+GGG | + | chr2.4:25853767-25853786 | MS.gene77666:CDS | 45.0% | |
GAGCAACATAAGCATGGTTG+AGG | + | chr2.4:25850606-25850625 | MS.gene77666:CDS | 45.0% | |
GCTACAAAACCTCCAAGCAT+GGG | + | chr2.4:25855413-25855432 | MS.gene77666:CDS | 45.0% | |
GGTAGTTGCTATGATGACAC+AGG | + | chr2.4:25855434-25855453 | MS.gene77666:CDS | 45.0% | |
GTGCAACTGCATCAGGTTAT+TGG | + | chr2.4:25853729-25853748 | MS.gene77666:CDS | 45.0% | |
TAGAGATAGGTAGGTACAGG+TGG | + | chr2.4:25851754-25851773 | MS.gene77666:intron | 45.0% | |
TCAGGTTATTGGAAGGCAAC+AGG | + | chr2.4:25853740-25853759 | MS.gene77666:CDS | 45.0% | |
TCATAGCAACTACCCATGCT+TGG | - | chr2.4:25855428-25855447 | None:intergenic | 45.0% | |
TCATCACCAAGCTTAGGTGA+AGG | + | chr2.4:25855770-25855789 | MS.gene77666:CDS | 45.0% | |
TCGATGACCTTAATATGGGG+TGG | + | chr2.4:25855052-25855071 | MS.gene77666:intron | 45.0% | |
TGACCTTAATATGGGGTGGT+GGG | + | chr2.4:25855056-25855075 | MS.gene77666:intron | 45.0% | |
TGCTACAAAACCTCCAAGCA+TGG | + | chr2.4:25855412-25855431 | MS.gene77666:CDS | 45.0% | |
TTTCCTGGTATGAATGAGGG+AGG | + | chr2.4:25854679-25854698 | MS.gene77666:intron | 45.0% | |
TTTCGTATTGAGGGTCCTCA+TGG | + | chr2.4:25853875-25853894 | MS.gene77666:CDS | 45.0% | |
!! | ATCAAGGAAGGGCACCTAAA+GGG | + | chr2.4:25853825-25853844 | MS.gene77666:CDS | 45.0% |
!! | GAAATTTTAGGAGGGCCATG+AGG | - | chr2.4:25853893-25853912 | None:intergenic | 45.0% |
!! | GGTTGTAGATTGGGTTGGTT+TGG | - | chr2.4:25855568-25855587 | None:intergenic | 45.0% |
!! | TATCAAGGAAGGGCACCTAA+AGG | + | chr2.4:25853824-25853843 | MS.gene77666:CDS | 45.0% |
!!! | AGCTTGGTGATGACCCTTTT+AGG | - | chr2.4:25855763-25855782 | None:intergenic | 45.0% |
!! | TTTATAAATTTAAATAGTTA+TGG | + | chr2.4:25852815-25852834 | MS.gene77666:intron | 5.0% |
!!! | AAAATATTTTTGATTAATTA+AGG | - | chr2.4:25852063-25852082 | None:intergenic | 5.0% |
!!! | TAATCAAAAATATTTTTATT+TGG | + | chr2.4:25852067-25852086 | MS.gene77666:intron | 5.0% |
CACATACACGCACCATGGAA+AGG | + | chr2.4:25851947-25851966 | MS.gene77666:intron | 50.0% | |
GGACAGAGCTATCCTTCGTA+AGG | + | chr2.4:25853766-25853785 | MS.gene77666:CDS | 50.0% | |
GGATGAAATCTGAACCCTGG+TGG | - | chr2.4:25850640-25850659 | None:intergenic | 50.0% | |
TAGCAACTACCCATGCTTGG+AGG | - | chr2.4:25855425-25855444 | None:intergenic | 50.0% | |
TGTGAGCCATGGGATATTCC+TGG | + | chr2.4:25850748-25850767 | MS.gene77666:CDS | 50.0% | |
TTGAGGCAAAGCTACCACCA+GGG | + | chr2.4:25850623-25850642 | MS.gene77666:CDS | 50.0% | |
TTGCCTCCCTCATTCATACC+AGG | - | chr2.4:25854685-25854704 | None:intergenic | 50.0% | |
! | CCCATGGCTCACACTTGTTA+AGG | - | chr2.4:25850741-25850760 | None:intergenic | 50.0% |
!! | CAACAAGAGTGCCCTTACGA+AGG | - | chr2.4:25853781-25853800 | None:intergenic | 50.0% |
!! | CTTCGTAAGGGCACTCTTGT+TGG | + | chr2.4:25853779-25853798 | MS.gene77666:CDS | 50.0% |
AAGTGGGTATGCCCCACATG+TGG | + | chr2.4:25855816-25855835 | MS.gene77666:CDS | 55.0% | |
CAGAAGCAGCATGTGTGGGA+GGG | + | chr2.4:25853645-25853664 | MS.gene77666:intron | 55.0% | |
CATGTGTGGGAGGGAAAGAG+TGG | + | chr2.4:25853654-25853673 | MS.gene77666:CDS | 55.0% | |
GGTGCAGAAGCAGCATGTGT+GGG | + | chr2.4:25853641-25853660 | MS.gene77666:intron | 55.0% | |
GTTGAGGCAAAGCTACCACC+AGG | + | chr2.4:25850622-25850641 | MS.gene77666:CDS | 55.0% | |
TGGTGCAGAAGCAGCATGTG+TGG | + | chr2.4:25853640-25853659 | MS.gene77666:intron | 55.0% | |
GCAGAAGCAGCATGTGTGGG+AGG | + | chr2.4:25853644-25853663 | MS.gene77666:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 25850604 | 25855850 | 25850604 | ID=MS.gene77666 |
chr2.4 | mRNA | 25850604 | 25855850 | 25850604 | ID=MS.gene77666.t1;Parent=MS.gene77666 |
chr2.4 | exon | 25850604 | 25850769 | 25850604 | ID=MS.gene77666.t1.exon1;Parent=MS.gene77666.t1 |
chr2.4 | CDS | 25850604 | 25850769 | 25850604 | ID=cds.MS.gene77666.t1;Parent=MS.gene77666.t1 |
chr2.4 | exon | 25853648 | 25853922 | 25853648 | ID=MS.gene77666.t1.exon2;Parent=MS.gene77666.t1 |
chr2.4 | CDS | 25853648 | 25853922 | 25853648 | ID=cds.MS.gene77666.t1;Parent=MS.gene77666.t1 |
chr2.4 | exon | 25855368 | 25855850 | 25855368 | ID=MS.gene77666.t1.exon3;Parent=MS.gene77666.t1 |
chr2.4 | CDS | 25855368 | 25855850 | 25855368 | ID=cds.MS.gene77666.t1;Parent=MS.gene77666.t1 |
Gene Sequence |
Protein sequence |