Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77679.t1 | XP_013455379.1 | 86.1 | 631 | 76 | 2 | 1 | 631 | 1 | 619 | 1.30E-292 | 1015.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77679.t1 | A4FUF0 | 40.0 | 90 | 49 | 3 | 330 | 419 | 10 | 94 | 4.8e-09 | 65.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77679.t1 | A0A072UU80 | 86.1 | 631 | 76 | 2 | 1 | 631 | 1 | 619 | 9.4e-293 | 1015.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene77679 | MS.gene067033 | PPI |
| MS.gene77679 | MS.gene007196 | PPI |
| MS.gene77679 | MS.gene75575 | PPI |
| MS.gene79130 | MS.gene77679 | PPI |
| MS.gene77679 | MS.gene045235 | PPI |
| MS.gene77679 | MS.gene55120 | PPI |
| MS.gene46640 | MS.gene77679 | PPI |
| MS.gene77679 | MS.gene045233 | PPI |
| MS.gene77679 | MS.gene95527 | PPI |
| MS.gene77679 | MS.gene24697 | PPI |
| MS.gene92710 | MS.gene77679 | PPI |
| MS.gene07741 | MS.gene77679 | PPI |
| MS.gene77679 | MS.gene050299 | PPI |
| MS.gene77911 | MS.gene77679 | PPI |
| MS.gene045232 | MS.gene77679 | PPI |
| MS.gene77679 | MS.gene037044 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77679.t1 | MTR_4g036445 | 86.098 | 633 | 76 | 2 | 1 | 633 | 1 | 621 | 0.0 | 1112 |
| MS.gene77679.t1 | MTR_1g049120 | 62.500 | 968 | 248 | 17 | 15 | 925 | 8 | 917 | 0.0 | 1073 |
| MS.gene77679.t1 | MTR_2g047912 | 76.271 | 413 | 89 | 3 | 515 | 927 | 275 | 678 | 0.0 | 625 |
| MS.gene77679.t1 | MTR_2g047912 | 56.631 | 279 | 77 | 4 | 23 | 267 | 9 | 277 | 2.48e-78 | 269 |
| MS.gene77679.t1 | MTR_1g072780 | 50.290 | 690 | 289 | 18 | 264 | 925 | 310 | 973 | 0.0 | 594 |
| MS.gene77679.t1 | MTR_2g104120 | 32.800 | 625 | 351 | 18 | 326 | 927 | 258 | 836 | 4.05e-82 | 283 |
| MS.gene77679.t1 | MTR_1g066890 | 39.249 | 293 | 130 | 7 | 323 | 615 | 315 | 559 | 1.19e-54 | 205 |
| MS.gene77679.t1 | MTR_1g066890 | 36.970 | 165 | 93 | 3 | 764 | 927 | 758 | 912 | 1.23e-21 | 101 |
| MS.gene77679.t1 | MTR_2g104980 | 58.252 | 103 | 42 | 1 | 326 | 428 | 233 | 334 | 4.00e-36 | 143 |
| MS.gene77679.t1 | MTR_6g005840 | 35.484 | 186 | 116 | 4 | 325 | 509 | 271 | 453 | 1.03e-25 | 114 |
| MS.gene77679.t1 | MTR_6g005840 | 35.484 | 186 | 116 | 4 | 325 | 509 | 229 | 411 | 1.37e-25 | 114 |
| MS.gene77679.t1 | MTR_6g005960 | 35.484 | 186 | 116 | 4 | 325 | 509 | 211 | 393 | 2.55e-24 | 109 |
| MS.gene77679.t1 | MTR_7g113180 | 33.735 | 166 | 95 | 4 | 326 | 483 | 87 | 245 | 9.02e-22 | 102 |
| MS.gene77679.t1 | MTR_2g013200 | 50.909 | 110 | 26 | 5 | 61 | 169 | 63 | 145 | 7.73e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77679.t1 | AT5G02950 | 32.143 | 616 | 299 | 17 | 329 | 915 | 98 | 623 | 5.37e-75 | 259 |
| MS.gene77679.t1 | AT5G02950 | 32.143 | 616 | 299 | 17 | 329 | 915 | 98 | 623 | 5.37e-75 | 259 |
| MS.gene77679.t1 | AT3G09670 | 51.813 | 193 | 91 | 2 | 325 | 516 | 196 | 387 | 2.82e-56 | 207 |
| MS.gene77679.t1 | AT3G09670 | 51.813 | 193 | 91 | 2 | 325 | 516 | 196 | 387 | 2.82e-56 | 207 |
| MS.gene77679.t1 | AT3G54760 | 37.342 | 316 | 167 | 6 | 608 | 922 | 457 | 742 | 3.07e-43 | 169 |
| MS.gene77679.t1 | AT3G54760 | 37.342 | 316 | 167 | 6 | 608 | 922 | 488 | 773 | 3.20e-43 | 169 |
| MS.gene77679.t1 | AT5G40340 | 39.888 | 178 | 101 | 6 | 326 | 501 | 125 | 298 | 6.41e-27 | 119 |
| MS.gene77679.t1 | AT5G40340 | 39.888 | 178 | 101 | 6 | 326 | 501 | 125 | 298 | 7.64e-27 | 118 |
| MS.gene77679.t1 | AT5G27650 | 33.155 | 187 | 115 | 6 | 326 | 505 | 171 | 354 | 5.01e-21 | 100 |
| MS.gene77679.t1 | AT3G05430 | 33.333 | 159 | 99 | 3 | 326 | 480 | 133 | 288 | 3.11e-20 | 97.4 |
| MS.gene77679.t1 | AT3G05430 | 33.333 | 159 | 99 | 3 | 326 | 480 | 133 | 288 | 3.19e-20 | 97.1 |
| MS.gene77679.t1 | AT3G27860 | 31.797 | 217 | 128 | 8 | 297 | 503 | 27 | 233 | 5.52e-16 | 83.2 |
| MS.gene77679.t1 | AT3G27860 | 31.797 | 217 | 128 | 8 | 297 | 503 | 27 | 233 | 5.52e-16 | 83.2 |
Find 193 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGAGGGAATGTCAAATTT+TGG | 0.168095 | 4.4:+67308912 | MS.gene77679:CDS |
| CCTTCACAAAGTTGTATTTC+TGG | 0.189172 | 4.4:-67310399 | None:intergenic |
| TTCTTTCTCTGATATGGTTT+GGG | 0.192247 | 4.4:+67309852 | MS.gene77679:CDS |
| TGCTATTTCGTTGCGTATTT+TGG | 0.192293 | 4.4:+67309964 | MS.gene77679:CDS |
| ACAAATCCATCGTTTAAAAT+TGG | 0.229699 | 4.4:+67310786 | MS.gene77679:CDS |
| AAGATATGAGTGACTCAAAT+TGG | 0.253085 | 4.4:+67311156 | MS.gene77679:CDS |
| GTCTCAAGACGAGTCGAATA+TGG | 0.258530 | 4.4:+67310114 | MS.gene77679:CDS |
| TTTCTTTCTCTGATATGGTT+TGG | 0.268068 | 4.4:+67309851 | MS.gene77679:CDS |
| AACCATATGTTTAGGCGTTT+TGG | 0.275299 | 4.4:+67311446 | MS.gene77679:CDS |
| GGTGATTCTGTTAAGGGTGC+TGG | 0.281698 | 4.4:+67308777 | MS.gene77679:CDS |
| CTCCTTCTCTTGGAATGTTC+AGG | 0.288105 | 4.4:-67310684 | None:intergenic |
| AACGATGTGAGTGGTGTTTC+TGG | 0.298950 | 4.4:+67309110 | MS.gene77679:CDS |
| GAACAGACCGCAAAGGTTAA+AGG | 0.321406 | 4.4:+67309218 | MS.gene77679:CDS |
| CAATCACCGTCTCGAGAATC+TGG | 0.323985 | 4.4:-67310636 | None:intergenic |
| GGGTGCTGGGGCCGTGGCCG+TGG | 0.340328 | 4.4:+67308791 | MS.gene77679:CDS |
| GCAGGTTTGTCGGCAGCTAT+TGG | 0.362443 | 4.4:+67309505 | MS.gene77679:CDS |
| GAAGAAGAATTTAATGAAGC+TGG | 0.362869 | 4.4:+67309712 | MS.gene77679:CDS |
| GACGACTTCGAAATGCAAAC+TGG | 0.369537 | 4.4:+67310726 | MS.gene77679:CDS |
| GAAAGAATGTGTTTCGGAAC+AGG | 0.376759 | 4.4:+67309663 | MS.gene77679:CDS |
| GGGTAGTTTCTTCATCCTCT+TGG | 0.377859 | 4.4:-67311099 | None:intergenic |
| TTCACTATTTGCTGAAATGT+TGG | 0.384639 | 4.4:+67308833 | MS.gene77679:CDS |
| CAAACCTTAACCATATGTTT+AGG | 0.391917 | 4.4:+67311438 | MS.gene77679:CDS |
| GTGATTCTGTTAAGGGTGCT+GGG | 0.393629 | 4.4:+67308778 | MS.gene77679:CDS |
| CATATTCTATAAGTTTCATC+GGG | 0.394392 | 4.4:-67310269 | None:intergenic |
| AAGCACAGTCTATAGCATTC+TGG | 0.394919 | 4.4:-67310083 | None:intergenic |
| TTCTGTTGGTGCAGGTTTGT+CGG | 0.398560 | 4.4:+67309495 | MS.gene77679:CDS |
| TATCTTACCTTTAACCTTTG+CGG | 0.399233 | 4.4:-67309225 | None:intergenic |
| CACATTCCACAGACCCATCT+AGG | 0.400964 | 4.4:-67308725 | None:intergenic |
| ATTGATGTCACTCCTTCTCT+TGG | 0.404257 | 4.4:-67310694 | None:intergenic |
| ATCGTGTCATAGATGTCTTT+AGG | 0.408022 | 4.4:-67310156 | None:intergenic |
| CTGTAATTGTGGCTGCTGAT+TGG | 0.409494 | 4.4:+67311045 | MS.gene77679:CDS |
| TAGATGGGTCTGTGGAATGT+GGG | 0.413456 | 4.4:+67308727 | MS.gene77679:CDS |
| ATCCATGGCAGAAGCAGAAA+AGG | 0.416193 | 4.4:+67308632 | None:intergenic |
| ATTTGTGGTGATTCTGTTAA+GGG | 0.416401 | 4.4:+67308771 | MS.gene77679:CDS |
| GATTTGTGGTGATTCTGTTA+AGG | 0.418399 | 4.4:+67308770 | MS.gene77679:CDS |
| GTGCGCTACGGCCACGGCCA+CGG | 0.418490 | 4.4:-67308802 | None:intergenic |
| AAACTACCCATGGCTGGAAC+TGG | 0.419246 | 4.4:+67311113 | MS.gene77679:CDS |
| TCAGCAAATAGTGAAGTAAC+CGG | 0.419526 | 4.4:-67308825 | None:intergenic |
| TACTGGTGGCTTTGATCGAT+TGG | 0.421819 | 4.4:+67310314 | MS.gene77679:CDS |
| TCAGGTGAAACCAGGTGATC+TGG | 0.428952 | 4.4:-67310666 | None:intergenic |
| GTTAATCGTAGGCCATATTC+CGG | 0.429226 | 4.4:+67311293 | MS.gene77679:CDS |
| GAATCTGGAGTCCCATTCAT+TGG | 0.430347 | 4.4:-67310621 | None:intergenic |
| AACGCCTAAACATATGGTTA+AGG | 0.435287 | 4.4:-67311442 | None:intergenic |
| CATGATGTTAAACTTGTTGT+TGG | 0.436633 | 4.4:+67308696 | MS.gene77679:CDS |
| GGGAAAAGAAAACTAACATA+TGG | 0.436804 | 4.4:+67309733 | MS.gene77679:CDS |
| TGATATTGAACATGCCGATT+GGG | 0.449657 | 4.4:+67308991 | MS.gene77679:CDS |
| GTCCAAAACGCCTAAACATA+TGG | 0.451508 | 4.4:-67311448 | None:intergenic |
| CGATTAACTTGGGCTGGCTC+TGG | 0.452688 | 4.4:-67311278 | None:intergenic |
| AAAGCGTAAATGTAATTTCA+AGG | 0.454246 | 4.4:+67310557 | MS.gene77679:CDS |
| CAACAACAAGTTTAACATCA+TGG | 0.454767 | 4.4:-67308695 | None:intergenic |
| TGTTAAGGGTGCTGGGGCCG+TGG | 0.456262 | 4.4:+67308785 | MS.gene77679:CDS |
| TAGTTCAGAAATAGTTCATC+AGG | 0.456384 | 4.4:+67309789 | MS.gene77679:CDS |
| ATTGGGAATGATAAAGTTGA+TGG | 0.457044 | 4.4:+67309008 | MS.gene77679:CDS |
| TACTATGCATCCAGCAAAGA+AGG | 0.457588 | 4.4:+67310581 | MS.gene77679:CDS |
| TCAACATAATCAACAGTTGT+AGG | 0.458971 | 4.4:-67310897 | None:intergenic |
| GCTTGTAGTTCTGTTGGTGC+AGG | 0.459611 | 4.4:+67309487 | MS.gene77679:CDS |
| AAGAAGAATTTAATGAAGCT+GGG | 0.461918 | 4.4:+67309713 | MS.gene77679:CDS |
| GAAACATCCAATCCATTCTC+AGG | 0.469929 | 4.4:-67310873 | None:intergenic |
| AAGTCGACAGAGCAAGCAAA+CGG | 0.474065 | 4.4:+67311492 | MS.gene77679:CDS |
| TCAACGTCTCCATCTGTCTT+CGG | 0.475054 | 4.4:-67310843 | None:intergenic |
| GGCCGTGGCCGTAGCGCACC+CGG | 0.477152 | 4.4:+67308806 | MS.gene77679:CDS |
| TCGGAACAGGTTGGTTCAGA+TGG | 0.478265 | 4.4:+67309676 | MS.gene77679:CDS |
| ACATATTCTATAAGTTTCAT+CGG | 0.479992 | 4.4:-67310270 | None:intergenic |
| ATGGTTAAGGTTTGTTTCTG+AGG | 0.480633 | 4.4:-67311429 | None:intergenic |
| ATTCTCGAGACGGTGATTGT+TGG | 0.483757 | 4.4:+67310640 | MS.gene77679:CDS |
| CATTCTGGAATGATTCTAAA+CGG | 0.484135 | 4.4:-67310068 | None:intergenic |
| TCTCAAGACGAGTCGAATAT+GGG | 0.485338 | 4.4:+67310115 | MS.gene77679:CDS |
| ATTCTTGAAATCAGAGAAGA+AGG | 0.488652 | 4.4:-67311021 | None:intergenic |
| GGCCTACGATTAACTTGGGC+TGG | 0.494128 | 4.4:-67311284 | None:intergenic |
| GAATGCTATAGACTGTGCTT+TGG | 0.497440 | 4.4:+67310086 | MS.gene77679:CDS |
| AGAACCTACCCATGGTGGCC+TGG | 0.498118 | 4.4:+67309883 | MS.gene77679:CDS |
| AGATGGGTCTGTGGAATGTG+GGG | 0.499368 | 4.4:+67308728 | MS.gene77679:CDS |
| GAACAATCTGATGTCCTTGA+GGG | 0.501425 | 4.4:+67309143 | MS.gene77679:CDS |
| AGTGAAGATAGCATATCATC+TGG | 0.502758 | 4.4:-67310942 | None:intergenic |
| TTGTTGACAATGAACAAGAT+TGG | 0.505222 | 4.4:+67310445 | MS.gene77679:CDS |
| TTGTTGGACTCCAGATCACC+TGG | 0.505467 | 4.4:+67310656 | MS.gene77679:CDS |
| AGGACGTCAGACCCAATGAA+TGG | 0.506637 | 4.4:+67310609 | MS.gene77679:CDS |
| AAAGCTTTGAACACTGCACT+TGG | 0.506705 | 4.4:-67311623 | None:intergenic |
| GTTCATGATGAAGTGATTTG+TGG | 0.507611 | 4.4:+67308756 | MS.gene77679:CDS |
| CATTGTCATTGTCAATGACC+CGG | 0.508721 | 4.4:-67311184 | None:intergenic |
| TGTAGAGAAAGAATGTGTTT+CGG | 0.512683 | 4.4:+67309657 | MS.gene77679:CDS |
| TTGATATTGAACATGCCGAT+TGG | 0.513289 | 4.4:+67308990 | MS.gene77679:CDS |
| AACCGGGTGCGCTACGGCCA+CGG | 0.513775 | 4.4:-67308808 | None:intergenic |
| TCCCAGTGTTGTCTACAGTC+TGG | 0.514788 | 4.4:-67310185 | None:intergenic |
| AGTCGACAGAGCAAGCAAAC+GGG | 0.514954 | 4.4:+67311493 | MS.gene77679:CDS |
| GAATGAAGCATCTCAGCTAA+AGG | 0.515864 | 4.4:+67310005 | MS.gene77679:CDS |
| GTTGTTGGTGAAACCCTAGA+TGG | 0.516784 | 4.4:+67308711 | MS.gene77679:CDS |
| TGATCGTCTGTATTAACTGC+AGG | 0.518820 | 4.4:-67310492 | None:intergenic |
| TCTTTCTCTGATATGGTTTG+GGG | 0.522638 | 4.4:+67309853 | MS.gene77679:CDS |
| AACAACAAGTTTAACATCAT+GGG | 0.524103 | 4.4:-67308694 | None:intergenic |
| ACACTATCTAAGTTGCCTAC+TGG | 0.524971 | 4.4:+67310297 | MS.gene77679:CDS |
| AAGTTCATAACAAGCTCAGC+AGG | 0.528013 | 4.4:-67311386 | None:intergenic |
| GGACGTCAGACCCAATGAAT+GGG | 0.528030 | 4.4:+67310610 | MS.gene77679:CDS |
| GGTTGGTTCAGATGGTGGTC+GGG | 0.528631 | 4.4:+67309684 | MS.gene77679:CDS |
| AATCTGGAGTCCCATTCATT+GGG | 0.529750 | 4.4:-67310620 | None:intergenic |
| TGGTTAAGGTTTGTTTCTGA+GGG | 0.530544 | 4.4:-67311428 | None:intergenic |
| AAATTGGTGACTATATTCGT+AGG | 0.534916 | 4.4:+67310802 | MS.gene77679:CDS |
| CACTTGGAGTGTAATTAAGC+TGG | 0.535263 | 4.4:-67311607 | None:intergenic |
| GTGACTCAAATTGGACTGAC+CGG | 0.535526 | 4.4:+67311165 | MS.gene77679:CDS |
| GAGGGATCAAATATCTGTCC+AGG | 0.536371 | 4.4:-67309901 | None:intergenic |
| CTAGATGGGTCTGTGGAATG+TGG | 0.536941 | 4.4:+67308726 | MS.gene77679:CDS |
| TTTCAAGAATTCTGTAATTG+TGG | 0.537467 | 4.4:+67311034 | MS.gene77679:CDS |
| ATTGTAGATGAAGTTGTTTG+TGG | 0.540117 | 4.4:+67309041 | MS.gene77679:CDS |
| TTGGTGACAAATCATTTGCA+TGG | 0.541342 | 4.4:+67309983 | MS.gene77679:CDS |
| AGCAAGCAAACGGGCAAGAG+TGG | 0.541526 | 4.4:+67311502 | MS.gene77679:CDS |
| CAGAAAAGTATATTCTCCAA+GGG | 0.541983 | 4.4:-67310985 | None:intergenic |
| TCAGAAAAGTATATTCTCCA+AGG | 0.544625 | 4.4:-67310986 | None:intergenic |
| TGCCCACTCAGATGCATCTG+AGG | 0.546971 | 4.4:-67309920 | None:intergenic |
| TTCCATCATGCAACAGCACA+TGG | 0.548238 | 4.4:-67309594 | None:intergenic |
| AATATGGCCTACGATTAACT+TGG | 0.550585 | 4.4:-67311289 | None:intergenic |
| TCAACTTTATCATTCCCAAT+CGG | 0.551031 | 4.4:-67309005 | None:intergenic |
| AGTGATGCTTGTAGTTCTGT+TGG | 0.553428 | 4.4:+67309481 | MS.gene77679:CDS |
| CACCTGAACATTCCAAGAGA+AGG | 0.554732 | 4.4:+67310682 | MS.gene77679:CDS |
| ATGAAGAAACTACCCATGGC+TGG | 0.555254 | 4.4:+67311107 | MS.gene77679:CDS |
| GTCTGATATTGTTGATATCG+TGG | 0.556725 | 4.4:+67308956 | MS.gene77679:CDS |
| GAACAGGTTGGTTCAGATGG+TGG | 0.560765 | 4.4:+67309679 | MS.gene77679:CDS |
| GGAGTCAAATATGAGGCAAA+AGG | 0.560804 | 4.4:+67309633 | MS.gene77679:CDS |
| TTGTTGGTGAAACCCTAGAT+GGG | 0.562351 | 4.4:+67308712 | MS.gene77679:CDS |
| TCCATGGCAGAAGCAGAAAA+GGG | 0.563521 | 4.4:+67308633 | None:intergenic |
| TGAACTATTTCTGAACTACC+AGG | 0.564289 | 4.4:-67309784 | None:intergenic |
| TGATAACATTGATGATGTTG+AGG | 0.565688 | 4.4:+67308896 | MS.gene77679:CDS |
| ATCAGATCCAGTTCCAGCCA+TGG | 0.566118 | 4.4:-67311120 | None:intergenic |
| TGGAATGTTCAGGTGAAACC+AGG | 0.567728 | 4.4:-67310674 | None:intergenic |
| TAAGAAGTGTGTAGATGCAG+AGG | 0.570718 | 4.4:+67311529 | MS.gene77679:CDS |
| ATATCTGTCCAGGCCACCAT+GGG | 0.571967 | 4.4:-67309891 | None:intergenic |
| GATAACATTGATGATGTTGA+GGG | 0.572260 | 4.4:+67308897 | MS.gene77679:CDS |
| ACGACTTCGAAATGCAAACT+GGG | 0.572627 | 4.4:+67310727 | MS.gene77679:CDS |
| TGAAGTAACCGGGTGCGCTA+CGG | 0.572987 | 4.4:-67308814 | None:intergenic |
| AGGTTGGTTCAGATGGTGGT+CGG | 0.574310 | 4.4:+67309683 | MS.gene77679:CDS |
| ACACTCAAATTACTGAGCAA+TGG | 0.575379 | 4.4:+67309569 | MS.gene77679:CDS |
| ATTCTGTGCACGGATATAGT+TGG | 0.576192 | 4.4:+67311074 | MS.gene77679:CDS |
| ACATTCCACAGACCCATCTA+GGG | 0.577354 | 4.4:-67308724 | None:intergenic |
| GATGGGTCTGTGGAATGTGG+GGG | 0.577375 | 4.4:+67308729 | MS.gene77679:CDS |
| CAGAAATAGTTCATCAGGCA+CGG | 0.577908 | 4.4:+67309794 | MS.gene77679:CDS |
| GCCAGACTGTAGACAACACT+GGG | 0.580489 | 4.4:+67310184 | MS.gene77679:CDS |
| AATAAGCATCACACGTGGGG+TGG | 0.581145 | 4.4:+67310218 | MS.gene77679:CDS |
| ATTGGAGCTTGAGATTGCTA+AGG | 0.583274 | 4.4:+67310332 | MS.gene77679:CDS |
| AATTGGTGACTATATTCGTA+GGG | 0.586383 | 4.4:+67310803 | MS.gene77679:CDS |
| GTTAATACAGACGATCAAGC+TGG | 0.592793 | 4.4:+67310498 | MS.gene77679:CDS |
| AAAGATGCACTTGTGAAGCC+TGG | 0.594983 | 4.4:+67309766 | MS.gene77679:CDS |
| GAATGTGTTTCGGAACAGGT+TGG | 0.597469 | 4.4:+67309667 | MS.gene77679:CDS |
| GAACTCATTCCGAAGACAGA+TGG | 0.599666 | 4.4:+67310834 | MS.gene77679:CDS |
| TCGGCGAGGAGTCAAATATG+AGG | 0.599713 | 4.4:+67309626 | MS.gene77679:CDS |
| GTCGGCAGCTATTGGTAGTG+AGG | 0.600055 | 4.4:+67309513 | MS.gene77679:CDS |
| TCAGATCCAGTTCCAGCCAT+GGG | 0.600255 | 4.4:-67311119 | None:intergenic |
| GCCCACTCAGATGCATCTGA+GGG | 0.601078 | 4.4:-67309919 | None:intergenic |
| TTCTGAAAGCAATCATGCTG+AGG | 0.603160 | 4.4:+67311325 | MS.gene77679:CDS |
| TAGGGCACATTTCTCCACAA+TGG | 0.604810 | 4.4:+67310032 | MS.gene77679:CDS |
| GATAAAGTTGATGGCAAAGG+CGG | 0.607171 | 4.4:+67309017 | MS.gene77679:CDS |
| TGAACAATCTGATGTCCTTG+AGG | 0.612356 | 4.4:+67309142 | MS.gene77679:CDS |
| TTTAACATCATGGGTCACAA+TGG | 0.613423 | 4.4:-67308685 | None:intergenic |
| AGCCATGTGCTGTTGCATGA+TGG | 0.616493 | 4.4:+67309592 | MS.gene77679:CDS |
| GCATTCTCATCTATATAACC+AGG | 0.616725 | 4.4:-67311362 | None:intergenic |
| TCCCTCAGATGCATCTGAGT+GGG | 0.618148 | 4.4:+67309918 | MS.gene77679:CDS |
| CCAGAAATACAACTTTGTGA+AGG | 0.619620 | 4.4:+67310399 | MS.gene77679:CDS |
| AATGATAAAGTTGATGGCAA+AGG | 0.621210 | 4.4:+67309014 | MS.gene77679:CDS |
| AACAGAAAGAAGTAAAACAA+TGG | 0.622125 | 4.4:+67309196 | MS.gene77679:CDS |
| CGGATATAGTTGGCACCAAG+AGG | 0.622839 | 4.4:+67311084 | MS.gene77679:CDS |
| TGACTCAAATTGGACTGACC+GGG | 0.622964 | 4.4:+67311166 | MS.gene77679:CDS |
| CTGTCCAGGCCACCATGGGT+AGG | 0.623900 | 4.4:-67309887 | None:intergenic |
| CTATCTAAGTTGCCTACTGG+TGG | 0.624727 | 4.4:+67310300 | MS.gene77679:CDS |
| TTGGAAAGAGATTCTGTGCA+CGG | 0.625171 | 4.4:+67311064 | MS.gene77679:CDS |
| ACTTTGTGAAGGCGTTGACA+AGG | 0.626364 | 4.4:+67310410 | MS.gene77679:CDS |
| CAGCAAATAGTGAAGTAACC+GGG | 0.627759 | 4.4:-67308824 | None:intergenic |
| ATATGGCCTACGATTAACTT+GGG | 0.629330 | 4.4:-67311288 | None:intergenic |
| AGCCAGACTGTAGACAACAC+TGG | 0.630022 | 4.4:+67310183 | MS.gene77679:CDS |
| CATCTATTAGCATCCCCTCA+AGG | 0.633543 | 4.4:-67309157 | None:intergenic |
| AATCGATCAAAGCCACCAGT+AGG | 0.638533 | 4.4:-67310312 | None:intergenic |
| ATCCCTCAGATGCATCTGAG+TGG | 0.638881 | 4.4:+67309917 | MS.gene77679:CDS |
| GGGACTCCAGATTCTCGAGA+CGG | 0.640014 | 4.4:+67310630 | MS.gene77679:CDS |
| AACAATGGAACAGACCGCAA+AGG | 0.641264 | 4.4:+67309211 | MS.gene77679:CDS |
| AGTTGAAAAGTGCTATGCAA+AGG | 0.642907 | 4.4:+67309070 | MS.gene77679:CDS |
| AATATCTGTCCAGGCCACCA+TGG | 0.643849 | 4.4:-67309892 | None:intergenic |
| AAGAAATAAGCATCACACGT+GGG | 0.646392 | 4.4:+67310214 | MS.gene77679:CDS |
| AGAAATAAGCATCACACGTG+GGG | 0.647299 | 4.4:+67310215 | MS.gene77679:CDS |
| TGATTCTGTTAAGGGTGCTG+GGG | 0.649891 | 4.4:+67308779 | MS.gene77679:CDS |
| AGAAAAGTATATTCTCCAAG+GGG | 0.651247 | 4.4:-67310984 | None:intergenic |
| AGCCAGCCCAAGTTAATCGT+AGG | 0.659455 | 4.4:+67311282 | MS.gene77679:CDS |
| GGTGGATGAATCTCAAAATG+TGG | 0.659940 | 4.4:+67310236 | MS.gene77679:CDS |
| GCTTGTTATGAACTTTGCCG+AGG | 0.662578 | 4.4:+67311394 | MS.gene77679:CDS |
| AACAATCTGATGTCCTTGAG+GGG | 0.663054 | 4.4:+67309144 | MS.gene77679:CDS |
| TGAGGGAACAGAATTGACCT+CGG | 0.667524 | 4.4:-67311411 | None:intergenic |
| TCTCCACAATGGAAAAGCAG+AGG | 0.668805 | 4.4:+67310043 | MS.gene77679:CDS |
| CAAGAAATAAGCATCACACG+TGG | 0.672704 | 4.4:+67310213 | MS.gene77679:CDS |
| GCAAAGTGAGAACCTACCCA+TGG | 0.672895 | 4.4:+67309875 | MS.gene77679:CDS |
| TTCTCATCTATATAACCAGG+AGG | 0.679754 | 4.4:-67311359 | None:intergenic |
| GAGGATGAAGAAACTACCCA+TGG | 0.684673 | 4.4:+67311103 | MS.gene77679:CDS |
| AAGTGAGAACCTACCCATGG+TGG | 0.686895 | 4.4:+67309878 | MS.gene77679:CDS |
| CAATGAACAAGATTGGTGCG+AGG | 0.693330 | 4.4:+67310452 | MS.gene77679:CDS |
| TGAAACCCTAGATGGGTCTG+TGG | 0.694469 | 4.4:+67308719 | MS.gene77679:CDS |
| ATAGCTGACAACGATGTGAG+TGG | 0.732139 | 4.4:+67309101 | MS.gene77679:CDS |
| ATATTCTATAAGTTTCATCG+GGG | 0.738354 | 4.4:-67310268 | None:intergenic |
| ATAGATGTTGAAGATCAACA+AGG | 0.760784 | 4.4:+67309173 | MS.gene77679:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTGATTTTTTAAATTTCT+CGG | - | chr4.4:67310525-67310544 | None:intergenic | 15.0% |
| !!! | TTTTGTCATCAAAATTTTAT+CGG | + | chr4.4:67309408-67309427 | MS.gene77679:intron | 15.0% |
| !! | ACATATTCTATAAGTTTCAT+CGG | - | chr4.4:67310273-67310292 | None:intergenic | 20.0% |
| ! | AAAGCGTAAATGTAATTTCA+AGG | + | chr4.4:67310557-67310576 | MS.gene77679:CDS | 25.0% |
| ! | AACAACAAGTTTAACATCAT+GGG | - | chr4.4:67308697-67308716 | None:intergenic | 25.0% |
| ! | AACAGAAAGAAGTAAAACAA+TGG | + | chr4.4:67309196-67309215 | MS.gene77679:CDS | 25.0% |
| ! | AAGAAGAATTTAATGAAGCT+GGG | + | chr4.4:67309713-67309732 | MS.gene77679:CDS | 25.0% |
| ! | ATATTCTATAAGTTTCATCG+GGG | - | chr4.4:67310271-67310290 | None:intergenic | 25.0% |
| ! | CATATTCTATAAGTTTCATC+GGG | - | chr4.4:67310272-67310291 | None:intergenic | 25.0% |
| ! | GCTAAAAAGTTCAACATATT+TGG | + | chr4.4:67311566-67311585 | MS.gene77679:CDS | 25.0% |
| ! | TTTCAAGAATTCTGTAATTG+TGG | + | chr4.4:67311034-67311053 | MS.gene77679:CDS | 25.0% |
| !! | AATTACATTTACGCTTTTGA+TGG | - | chr4.4:67310554-67310573 | None:intergenic | 25.0% |
| !! | ACAAATCCATCGTTTAAAAT+TGG | + | chr4.4:67310786-67310805 | MS.gene77679:CDS | 25.0% |
| !! | ATTACATTTACGCTTTTGAT+GGG | - | chr4.4:67310553-67310572 | None:intergenic | 25.0% |
| !!! | AATTTTAAACGATGGATTTG+TGG | - | chr4.4:67310787-67310806 | None:intergenic | 25.0% |
| AAGATATGAGTGACTCAAAT+TGG | + | chr4.4:67311156-67311175 | MS.gene77679:CDS | 30.0% | |
| ACTGGGAAAAATACAATTTC+TGG | + | chr4.4:67310744-67310763 | MS.gene77679:CDS | 30.0% | |
| ATAGATGTTGAAGATCAACA+AGG | + | chr4.4:67309173-67309192 | MS.gene77679:CDS | 30.0% | |
| ATTCTTGAAATCAGAGAAGA+AGG | - | chr4.4:67311024-67311043 | None:intergenic | 30.0% | |
| ATTGGGAATGATAAAGTTGA+TGG | + | chr4.4:67309008-67309027 | MS.gene77679:CDS | 30.0% | |
| ATTGTAGATGAAGTTGTTTG+TGG | + | chr4.4:67309041-67309060 | MS.gene77679:CDS | 30.0% | |
| ATTTGTGGTGATTCTGTTAA+GGG | + | chr4.4:67308771-67308790 | MS.gene77679:CDS | 30.0% | |
| CAAACCTTAACCATATGTTT+AGG | + | chr4.4:67311438-67311457 | MS.gene77679:CDS | 30.0% | |
| CAACAACAAGTTTAACATCA+TGG | - | chr4.4:67308698-67308717 | None:intergenic | 30.0% | |
| CAGAAAAAAGACAAACTACT+TGG | + | chr4.4:67311242-67311261 | MS.gene77679:CDS | 30.0% | |
| GAAGAAGAATTTAATGAAGC+TGG | + | chr4.4:67309712-67309731 | MS.gene77679:CDS | 30.0% | |
| GGGAAAAGAAAACTAACATA+TGG | + | chr4.4:67309733-67309752 | MS.gene77679:CDS | 30.0% | |
| TAGTTCAGAAATAGTTCATC+AGG | + | chr4.4:67309789-67309808 | MS.gene77679:CDS | 30.0% | |
| TATCTTACCTTTAACCTTTG+CGG | - | chr4.4:67309228-67309247 | None:intergenic | 30.0% | |
| TCAACATAATCAACAGTTGT+AGG | - | chr4.4:67310900-67310919 | None:intergenic | 30.0% | |
| TCAACTTTATCATTCCCAAT+CGG | - | chr4.4:67309008-67309027 | None:intergenic | 30.0% | |
| TGTAGAGAAAGAATGTGTTT+CGG | + | chr4.4:67309657-67309676 | MS.gene77679:CDS | 30.0% | |
| TTCAATGTAATCACAAGTGT+CGG | - | chr4.4:67309388-67309407 | None:intergenic | 30.0% | |
| TTCTTTCTCTGATATGGTTT+GGG | + | chr4.4:67309852-67309871 | MS.gene77679:CDS | 30.0% | |
| TTGTTGACAATGAACAAGAT+TGG | + | chr4.4:67310445-67310464 | MS.gene77679:CDS | 30.0% | |
| TTTCTTTCTCTGATATGGTT+TGG | + | chr4.4:67309851-67309870 | MS.gene77679:CDS | 30.0% | |
| ! | AAATTGGTGACTATATTCGT+AGG | + | chr4.4:67310802-67310821 | MS.gene77679:CDS | 30.0% |
| ! | AATTGGTGACTATATTCGTA+GGG | + | chr4.4:67310803-67310822 | MS.gene77679:CDS | 30.0% |
| ! | AGAAAAGTATATTCTCCAAG+GGG | - | chr4.4:67310987-67311006 | None:intergenic | 30.0% |
| ! | ATCTCAGCTAAAGGATTTTA+GGG | + | chr4.4:67310014-67310033 | MS.gene77679:CDS | 30.0% |
| ! | CAGAAAAGTATATTCTCCAA+GGG | - | chr4.4:67310988-67311007 | None:intergenic | 30.0% |
| ! | CATGATGGAAAAGAAAAACT+CGG | + | chr4.4:67309607-67309626 | MS.gene77679:CDS | 30.0% |
| ! | GGAGAATATACTTTTCTGAA+TGG | + | chr4.4:67310990-67311009 | MS.gene77679:CDS | 30.0% |
| ! | TAGTCACCAATTTTAAACGA+TGG | - | chr4.4:67310795-67310814 | None:intergenic | 30.0% |
| ! | TCAGAAAAGTATATTCTCCA+AGG | - | chr4.4:67310989-67311008 | None:intergenic | 30.0% |
| ! | TTCACTATTTGCTGAAATGT+TGG | + | chr4.4:67308833-67308852 | MS.gene77679:CDS | 30.0% |
| ! | TTGAGGGAATGTCAAATTTT+GGG | + | chr4.4:67308913-67308932 | MS.gene77679:CDS | 30.0% |
| !! | AATGATAAAGTTGATGGCAA+AGG | + | chr4.4:67309014-67309033 | MS.gene77679:CDS | 30.0% |
| !! | CATGATGTTAAACTTGTTGT+TGG | + | chr4.4:67308696-67308715 | MS.gene77679:CDS | 30.0% |
| !! | CATTCTGGAATGATTCTAAA+CGG | - | chr4.4:67310071-67310090 | None:intergenic | 30.0% |
| !! | GATAACATTGATGATGTTGA+GGG | + | chr4.4:67308897-67308916 | MS.gene77679:CDS | 30.0% |
| !! | TGATAACATTGATGATGTTG+AGG | + | chr4.4:67308896-67308915 | MS.gene77679:CDS | 30.0% |
| !!! | CAAGTAGTTTGTCTTTTTTC+TGG | - | chr4.4:67311244-67311263 | None:intergenic | 30.0% |
| !!! | GATTGCTTTCAGAACTTTTT+TGG | - | chr4.4:67311319-67311338 | None:intergenic | 30.0% |
| !!! | TTTTTCTGGTTTTTCTGCAA+TGG | - | chr4.4:67311230-67311249 | None:intergenic | 30.0% |
| AACGCCTAAACATATGGTTA+AGG | - | chr4.4:67311445-67311464 | None:intergenic | 35.0% | |
| AAGAAATAAGCATCACACGT+GGG | + | chr4.4:67310214-67310233 | MS.gene77679:CDS | 35.0% | |
| AATATGGCCTACGATTAACT+TGG | - | chr4.4:67311292-67311311 | None:intergenic | 35.0% | |
| ACACTCAAATTACTGAGCAA+TGG | + | chr4.4:67309569-67309588 | MS.gene77679:CDS | 35.0% | |
| AGTGAAGATAGCATATCATC+TGG | - | chr4.4:67310945-67310964 | None:intergenic | 35.0% | |
| ATATGGCCTACGATTAACTT+GGG | - | chr4.4:67311291-67311310 | None:intergenic | 35.0% | |
| ATCCAGCAAAGAAGGAAAAA+AGG | + | chr4.4:67310589-67310608 | MS.gene77679:CDS | 35.0% | |
| ATCGTGTCATAGATGTCTTT+AGG | - | chr4.4:67310159-67310178 | None:intergenic | 35.0% | |
| CCAGAAATACAACTTTGTGA+AGG | + | chr4.4:67310399-67310418 | MS.gene77679:CDS | 35.0% | |
| CCTTCACAAAGTTGTATTTC+TGG | - | chr4.4:67310402-67310421 | None:intergenic | 35.0% | |
| GATTTGTGGTGATTCTGTTA+AGG | + | chr4.4:67308770-67308789 | MS.gene77679:CDS | 35.0% | |
| GCATTCTCATCTATATAACC+AGG | - | chr4.4:67311365-67311384 | None:intergenic | 35.0% | |
| GTCTGATATTGTTGATATCG+TGG | + | chr4.4:67308956-67308975 | MS.gene77679:CDS | 35.0% | |
| GTTCATGATGAAGTGATTTG+TGG | + | chr4.4:67308756-67308775 | MS.gene77679:CDS | 35.0% | |
| TCAGCAAATAGTGAAGTAAC+CGG | - | chr4.4:67308828-67308847 | None:intergenic | 35.0% | |
| TCTTTCTCTGATATGGTTTG+GGG | + | chr4.4:67309853-67309872 | MS.gene77679:CDS | 35.0% | |
| TTCTCATCTATATAACCAGG+AGG | - | chr4.4:67311362-67311381 | None:intergenic | 35.0% | |
| TTGATATTGAACATGCCGAT+TGG | + | chr4.4:67308990-67309009 | MS.gene77679:CDS | 35.0% | |
| TTTAACATCATGGGTCACAA+TGG | - | chr4.4:67308688-67308707 | None:intergenic | 35.0% | |
| TTTGTTTCCTGCTTAACTAG+TGG | + | chr4.4:67309268-67309287 | MS.gene77679:intron | 35.0% | |
| ! | AACCATATGTTTAGGCGTTT+TGG | + | chr4.4:67311446-67311465 | MS.gene77679:CDS | 35.0% |
| ! | ATATAACCAGGAGGTTTTTC+AGG | - | chr4.4:67311353-67311372 | None:intergenic | 35.0% |
| ! | CATCTCAGCTAAAGGATTTT+AGG | + | chr4.4:67310013-67310032 | MS.gene77679:CDS | 35.0% |
| ! | CGAGTTTTCTTTCTCTGATA+TGG | + | chr4.4:67309846-67309865 | MS.gene77679:CDS | 35.0% |
| ! | GTTGAGGGAATGTCAAATTT+TGG | + | chr4.4:67308912-67308931 | MS.gene77679:CDS | 35.0% |
| ! | GTTGATGTTTTTCCTGAGAA+TGG | + | chr4.4:67310861-67310880 | MS.gene77679:CDS | 35.0% |
| ! | TGATATTGAACATGCCGATT+GGG | + | chr4.4:67308991-67309010 | MS.gene77679:CDS | 35.0% |
| ! | TGTTTTTCCTGAGAATGGAT+TGG | + | chr4.4:67310866-67310885 | MS.gene77679:CDS | 35.0% |
| ! | TTGGTGACAAATCATTTGCA+TGG | + | chr4.4:67309983-67310002 | MS.gene77679:CDS | 35.0% |
| !! | AATTTTATCGGTGTCTTGTC+AGG | + | chr4.4:67309420-67309439 | MS.gene77679:intron | 35.0% |
| !! | AGTTGAAAAGTGCTATGCAA+AGG | + | chr4.4:67309070-67309089 | MS.gene77679:CDS | 35.0% |
| !! | ATGGTTAAGGTTTGTTTCTG+AGG | - | chr4.4:67311432-67311451 | None:intergenic | 35.0% |
| !! | TGAACTATTTCTGAACTACC+AGG | - | chr4.4:67309787-67309806 | None:intergenic | 35.0% |
| !! | TGGTTAAGGTTTGTTTCTGA+GGG | - | chr4.4:67311431-67311450 | None:intergenic | 35.0% |
| !!! | TGCTATTTCGTTGCGTATTT+TGG | + | chr4.4:67309964-67309983 | MS.gene77679:CDS | 35.0% |
| AACAATCTGATGTCCTTGAG+GGG | + | chr4.4:67309144-67309163 | MS.gene77679:CDS | 40.0% | |
| AAGCACAGTCTATAGCATTC+TGG | - | chr4.4:67310086-67310105 | None:intergenic | 40.0% | |
| AAGTTCATAACAAGCTCAGC+AGG | - | chr4.4:67311389-67311408 | None:intergenic | 40.0% | |
| ACACTATCTAAGTTGCCTAC+TGG | + | chr4.4:67310297-67310316 | MS.gene77679:CDS | 40.0% | |
| ACGACTTCGAAATGCAAACT+GGG | + | chr4.4:67310727-67310746 | MS.gene77679:CDS | 40.0% | |
| AGAAATAAGCATCACACGTG+GGG | + | chr4.4:67310215-67310234 | MS.gene77679:CDS | 40.0% | |
| ATCTAGAAACCTGTGAAGCA+TGG | - | chr4.4:67309461-67309480 | None:intergenic | 40.0% | |
| ATGTTATCATTCCCCCCAAT+CGG | - | chr4.4:67308885-67308904 | None:intergenic | 40.0% | |
| ATTCTGTGCACGGATATAGT+TGG | + | chr4.4:67311074-67311093 | MS.gene77679:CDS | 40.0% | |
| ATTGATGTCACTCCTTCTCT+TGG | - | chr4.4:67310697-67310716 | None:intergenic | 40.0% | |
| ATTGGAGCTTGAGATTGCTA+AGG | + | chr4.4:67310332-67310351 | MS.gene77679:CDS | 40.0% | |
| CAAGAAATAAGCATCACACG+TGG | + | chr4.4:67310213-67310232 | MS.gene77679:CDS | 40.0% | |
| CACTTGGAGTGTAATTAAGC+TGG | - | chr4.4:67311610-67311629 | None:intergenic | 40.0% | |
| CAGAAATAGTTCATCAGGCA+CGG | + | chr4.4:67309794-67309813 | MS.gene77679:CDS | 40.0% | |
| CAGCAAATAGTGAAGTAACC+GGG | - | chr4.4:67308827-67308846 | None:intergenic | 40.0% | |
| CATTGTCATTGTCAATGACC+CGG | - | chr4.4:67311187-67311206 | None:intergenic | 40.0% | |
| CTGCCAGCAGTAAAAAAAGA+AGG | + | chr4.4:67309823-67309842 | MS.gene77679:CDS | 40.0% | |
| GAAACATCCAATCCATTCTC+AGG | - | chr4.4:67310876-67310895 | None:intergenic | 40.0% | |
| GAAAGAATGTGTTTCGGAAC+AGG | + | chr4.4:67309663-67309682 | MS.gene77679:CDS | 40.0% | |
| GAACAATCTGATGTCCTTGA+GGG | + | chr4.4:67309143-67309162 | MS.gene77679:CDS | 40.0% | |
| GAATGCTATAGACTGTGCTT+TGG | + | chr4.4:67310086-67310105 | MS.gene77679:CDS | 40.0% | |
| GGAGTCAAATATGAGGCAAA+AGG | + | chr4.4:67309633-67309652 | MS.gene77679:CDS | 40.0% | |
| GGTGGATGAATCTCAAAATG+TGG | + | chr4.4:67310236-67310255 | MS.gene77679:CDS | 40.0% | |
| GTCCAAAACGCCTAAACATA+TGG | - | chr4.4:67311451-67311470 | None:intergenic | 40.0% | |
| GTTAATACAGACGATCAAGC+TGG | + | chr4.4:67310498-67310517 | MS.gene77679:CDS | 40.0% | |
| GTTAATCGTAGGCCATATTC+CGG | + | chr4.4:67311293-67311312 | MS.gene77679:CDS | 40.0% | |
| GTTTCAACCACTAGTTAAGC+AGG | - | chr4.4:67309278-67309297 | None:intergenic | 40.0% | |
| TACTATGCATCCAGCAAAGA+AGG | + | chr4.4:67310581-67310600 | MS.gene77679:CDS | 40.0% | |
| TCTCAAGACGAGTCGAATAT+GGG | + | chr4.4:67310115-67310134 | MS.gene77679:CDS | 40.0% | |
| TGAACAATCTGATGTCCTTG+AGG | + | chr4.4:67309142-67309161 | MS.gene77679:CDS | 40.0% | |
| TGATCGTCTGTATTAACTGC+AGG | - | chr4.4:67310495-67310514 | None:intergenic | 40.0% | |
| TTGGAAAGAGATTCTGTGCA+CGG | + | chr4.4:67311064-67311083 | MS.gene77679:CDS | 40.0% | |
| ! | AATCTGGAGTCCCATTCATT+GGG | - | chr4.4:67310623-67310642 | None:intergenic | 40.0% |
| ! | ACGTCTTCGATCAGAAGTAT+TGG | - | chr4.4:67309349-67309368 | None:intergenic | 40.0% |
| ! | AGTGATGCTTGTAGTTCTGT+TGG | + | chr4.4:67309481-67309500 | MS.gene77679:CDS | 40.0% |
| ! | GAATGAAGCATCTCAGCTAA+AGG | + | chr4.4:67310005-67310024 | MS.gene77679:CDS | 40.0% |
| ! | GGTTTTTCTGCAATGGATGT+TGG | - | chr4.4:67311223-67311242 | None:intergenic | 40.0% |
| ! | TAAGAAGTGTGTAGATGCAG+AGG | + | chr4.4:67311529-67311548 | MS.gene77679:CDS | 40.0% |
| ! | TCGATTTTGTACATGCCGAT+TGG | + | chr4.4:67308867-67308886 | MS.gene77679:CDS | 40.0% |
| ! | TTCTGAAAGCAATCATGCTG+AGG | + | chr4.4:67311325-67311344 | MS.gene77679:CDS | 40.0% |
| ! | TTGTTGGTGAAACCCTAGAT+GGG | + | chr4.4:67308712-67308731 | MS.gene77679:CDS | 40.0% |
| !! | AAAGCTTTGAACACTGCACT+TGG | - | chr4.4:67311626-67311645 | None:intergenic | 40.0% |
| !! | ATTTTGTACATGCCGATTGG+GGG | + | chr4.4:67308870-67308889 | MS.gene77679:CDS | 40.0% |
| !! | CGATTTTGTACATGCCGATT+GGG | + | chr4.4:67308868-67308887 | MS.gene77679:CDS | 40.0% |
| !! | GATAAAGTTGATGGCAAAGG+CGG | + | chr4.4:67309017-67309036 | MS.gene77679:CDS | 40.0% |
| !! | GATTTTGTACATGCCGATTG+GGG | + | chr4.4:67308869-67308888 | MS.gene77679:CDS | 40.0% |
| !!! | GAACTTTTTTGGCCGGAATA+TGG | - | chr4.4:67311308-67311327 | None:intergenic | 40.0% |
| !!! | GCTTTCAGAACTTTTTTGGC+CGG | - | chr4.4:67311315-67311334 | None:intergenic | 40.0% |
| !!! | GTCCTTTTTTCCTTCTTTGC+TGG | - | chr4.4:67310594-67310613 | None:intergenic | 40.0% |
| !!! | TCGCCTTCTTTTTTTACTGC+TGG | - | chr4.4:67309829-67309848 | None:intergenic | 40.0% |
| AAACCTGTGAAGCATGGACA+CGG | - | chr4.4:67309455-67309474 | None:intergenic | 45.0% | |
| AAAGATGCACTTGTGAAGCC+TGG | + | chr4.4:67309766-67309785 | MS.gene77679:CDS | 45.0% | |
| AACAATGGAACAGACCGCAA+AGG | + | chr4.4:67309211-67309230 | MS.gene77679:CDS | 45.0% | |
| AACGATGTGAGTGGTGTTTC+TGG | + | chr4.4:67309110-67309129 | MS.gene77679:CDS | 45.0% | |
| AAGTCGACAGAGCAAGCAAA+CGG | + | chr4.4:67311492-67311511 | MS.gene77679:CDS | 45.0% | |
| AATCGATCAAAGCCACCAGT+AGG | - | chr4.4:67310315-67310334 | None:intergenic | 45.0% | |
| ACATTCCACAGACCCATCTA+GGG | - | chr4.4:67308727-67308746 | None:intergenic | 45.0% | |
| ATAGCTGACAACGATGTGAG+TGG | + | chr4.4:67309101-67309120 | MS.gene77679:CDS | 45.0% | |
| ATGAAGAAACTACCCATGGC+TGG | + | chr4.4:67311107-67311126 | MS.gene77679:CDS | 45.0% | |
| ATTCTCGAGACGGTGATTGT+TGG | + | chr4.4:67310640-67310659 | MS.gene77679:CDS | 45.0% | |
| CAATGAACAAGATTGGTGCG+AGG | + | chr4.4:67310452-67310471 | MS.gene77679:CDS | 45.0% | |
| CACCTGAACATTCCAAGAGA+AGG | + | chr4.4:67310682-67310701 | MS.gene77679:CDS | 45.0% | |
| CATCTATTAGCATCCCCTCA+AGG | - | chr4.4:67309160-67309179 | None:intergenic | 45.0% | |
| CTATCTAAGTTGCCTACTGG+TGG | + | chr4.4:67310300-67310319 | MS.gene77679:CDS | 45.0% | |
| CTCCTTCTCTTGGAATGTTC+AGG | - | chr4.4:67310687-67310706 | None:intergenic | 45.0% | |
| CTGTAATTGTGGCTGCTGAT+TGG | + | chr4.4:67311045-67311064 | MS.gene77679:CDS | 45.0% | |
| GAACAGACCGCAAAGGTTAA+AGG | + | chr4.4:67309218-67309237 | MS.gene77679:CDS | 45.0% | |
| GAACTCATTCCGAAGACAGA+TGG | + | chr4.4:67310834-67310853 | MS.gene77679:CDS | 45.0% | |
| GAATGTGTTTCGGAACAGGT+TGG | + | chr4.4:67309667-67309686 | MS.gene77679:CDS | 45.0% | |
| GACGACTTCGAAATGCAAAC+TGG | + | chr4.4:67310726-67310745 | MS.gene77679:CDS | 45.0% | |
| GAGGATGAAGAAACTACCCA+TGG | + | chr4.4:67311103-67311122 | MS.gene77679:CDS | 45.0% | |
| GAGGGATCAAATATCTGTCC+AGG | - | chr4.4:67309904-67309923 | None:intergenic | 45.0% | |
| GGGTAGTTTCTTCATCCTCT+TGG | - | chr4.4:67311102-67311121 | None:intergenic | 45.0% | |
| GTCTCAAGACGAGTCGAATA+TGG | + | chr4.4:67310114-67310133 | MS.gene77679:CDS | 45.0% | |
| GTGACTCAAATTGGACTGAC+CGG | + | chr4.4:67311165-67311184 | MS.gene77679:CDS | 45.0% | |
| TAGATGGGTCTGTGGAATGT+GGG | + | chr4.4:67308727-67308746 | MS.gene77679:CDS | 45.0% | |
| TAGGGCACATTTCTCCACAA+TGG | + | chr4.4:67310032-67310051 | MS.gene77679:CDS | 45.0% | |
| TCAACGTCTCCATCTGTCTT+CGG | - | chr4.4:67310846-67310865 | None:intergenic | 45.0% | |
| TCTCCACAATGGAAAAGCAG+AGG | + | chr4.4:67310043-67310062 | MS.gene77679:CDS | 45.0% | |
| TGACTCAAATTGGACTGACC+GGG | + | chr4.4:67311166-67311185 | MS.gene77679:CDS | 45.0% | |
| TGAGGGAACAGAATTGACCT+CGG | - | chr4.4:67311414-67311433 | None:intergenic | 45.0% | |
| TGGAAAAGAAAAACTCGGCG+AGG | + | chr4.4:67309612-67309631 | MS.gene77679:CDS | 45.0% | |
| TGGAATGTTCAGGTGAAACC+AGG | - | chr4.4:67310677-67310696 | None:intergenic | 45.0% | |
| TGTGTTGCACAAAAACCCCT+TGG | + | chr4.4:67310969-67310988 | MS.gene77679:CDS | 45.0% | |
| TTCCATCATGCAACAGCACA+TGG | - | chr4.4:67309597-67309616 | None:intergenic | 45.0% | |
| TTCTGTTGGTGCAGGTTTGT+CGG | + | chr4.4:67309495-67309514 | MS.gene77679:CDS | 45.0% | |
| ! | CTCAGCTGCTTGCGTTTTAT+CGG | + | chr4.4:67310355-67310374 | MS.gene77679:CDS | 45.0% |
| ! | GAATCTGGAGTCCCATTCAT+TGG | - | chr4.4:67310624-67310643 | None:intergenic | 45.0% |
| ! | GTTGTTGGTGAAACCCTAGA+TGG | + | chr4.4:67308711-67308730 | MS.gene77679:CDS | 45.0% |
| !! | ACTTTGTGAAGGCGTTGACA+AGG | + | chr4.4:67310410-67310429 | MS.gene77679:CDS | 45.0% |
| !! | GCTTGTTATGAACTTTGCCG+AGG | + | chr4.4:67311394-67311413 | MS.gene77679:CDS | 45.0% |
| !! | GTAATCACAAGTGTCGGTGT+CGG | - | chr4.4:67309382-67309401 | None:intergenic | 45.0% |
| !! | GTGATTCTGTTAAGGGTGCT+GGG | + | chr4.4:67308778-67308797 | MS.gene77679:CDS | 45.0% |
| !! | TACTGGTGGCTTTGATCGAT+TGG | + | chr4.4:67310314-67310333 | MS.gene77679:CDS | 45.0% |
| !! | TAGGCGTTTTGGACGACTAA+AGG | + | chr4.4:67311457-67311476 | MS.gene77679:CDS | 45.0% |
| !! | TGATTCTGTTAAGGGTGCTG+GGG | + | chr4.4:67308779-67308798 | MS.gene77679:CDS | 45.0% |
| !! | TTTTGTACATGCCGATTGGG+GGG | + | chr4.4:67308871-67308890 | MS.gene77679:CDS | 45.0% |
| AAACTACCCATGGCTGGAAC+TGG | + | chr4.4:67311113-67311132 | MS.gene77679:CDS | 50.0% | |
| AAGTGAGAACCTACCCATGG+TGG | + | chr4.4:67309878-67309897 | MS.gene77679:CDS | 50.0% | |
| AATAAGCATCACACGTGGGG+TGG | + | chr4.4:67310218-67310237 | MS.gene77679:CDS | 50.0% | |
| AATATCTGTCCAGGCCACCA+TGG | - | chr4.4:67309895-67309914 | None:intergenic | 50.0% | |
| AGATGGGTCTGTGGAATGTG+GGG | + | chr4.4:67308728-67308747 | MS.gene77679:CDS | 50.0% | |
| AGCCAGACTGTAGACAACAC+TGG | + | chr4.4:67310183-67310202 | MS.gene77679:CDS | 50.0% | |
| AGCCAGCCCAAGTTAATCGT+AGG | + | chr4.4:67311282-67311301 | MS.gene77679:CDS | 50.0% | |
| AGGACGTCAGACCCAATGAA+TGG | + | chr4.4:67310609-67310628 | MS.gene77679:CDS | 50.0% | |
| AGTCGACAGAGCAAGCAAAC+GGG | + | chr4.4:67311493-67311512 | MS.gene77679:CDS | 50.0% | |
| ATATCTGTCCAGGCCACCAT+GGG | - | chr4.4:67309894-67309913 | None:intergenic | 50.0% | |
| ATCAGATCCAGTTCCAGCCA+TGG | - | chr4.4:67311123-67311142 | None:intergenic | 50.0% | |
| ATCCCTCAGATGCATCTGAG+TGG | + | chr4.4:67309917-67309936 | MS.gene77679:CDS | 50.0% | |
| CAATCACCGTCTCGAGAATC+TGG | - | chr4.4:67310639-67310658 | None:intergenic | 50.0% | |
| CACATTCCACAGACCCATCT+AGG | - | chr4.4:67308728-67308747 | None:intergenic | 50.0% | |
| CGGATATAGTTGGCACCAAG+AGG | + | chr4.4:67311084-67311103 | MS.gene77679:CDS | 50.0% | |
| CTAGATGGGTCTGTGGAATG+TGG | + | chr4.4:67308726-67308745 | MS.gene77679:CDS | 50.0% | |
| GCAAAGTGAGAACCTACCCA+TGG | + | chr4.4:67309875-67309894 | MS.gene77679:CDS | 50.0% | |
| GCCAGACTGTAGACAACACT+GGG | + | chr4.4:67310184-67310203 | MS.gene77679:CDS | 50.0% | |
| GGACGTCAGACCCAATGAAT+GGG | + | chr4.4:67310610-67310629 | MS.gene77679:CDS | 50.0% | |
| TCAGATCCAGTTCCAGCCAT+GGG | - | chr4.4:67311122-67311141 | None:intergenic | 50.0% | |
| TCAGGTGAAACCAGGTGATC+TGG | - | chr4.4:67310669-67310688 | None:intergenic | 50.0% | |
| TCCCAGTGTTGTCTACAGTC+TGG | - | chr4.4:67310188-67310207 | None:intergenic | 50.0% | |
| TCCCTCAGATGCATCTGAGT+GGG | + | chr4.4:67309918-67309937 | MS.gene77679:CDS | 50.0% | |
| TCGGCGAGGAGTCAAATATG+AGG | + | chr4.4:67309626-67309645 | MS.gene77679:CDS | 50.0% | |
| TGAAACCCTAGATGGGTCTG+TGG | + | chr4.4:67308719-67308738 | MS.gene77679:CDS | 50.0% | |
| TTGTTGGACTCCAGATCACC+TGG | + | chr4.4:67310656-67310675 | MS.gene77679:CDS | 50.0% | |
| ! | AGCCATGTGCTGTTGCATGA+TGG | + | chr4.4:67309592-67309611 | MS.gene77679:CDS | 50.0% |
| ! | AGGTTGGTTCAGATGGTGGT+CGG | + | chr4.4:67309683-67309702 | MS.gene77679:CDS | 50.0% |
| ! | GCTTGTAGTTCTGTTGGTGC+AGG | + | chr4.4:67309487-67309506 | MS.gene77679:CDS | 50.0% |
| ! | GGTGATTCTGTTAAGGGTGC+TGG | + | chr4.4:67308777-67308796 | MS.gene77679:CDS | 50.0% |
| !! | GAACAGGTTGGTTCAGATGG+TGG | + | chr4.4:67309679-67309698 | MS.gene77679:CDS | 50.0% |
| !! | GCTCCTCTGCTTTTCCATTG+TGG | - | chr4.4:67310049-67310068 | None:intergenic | 50.0% |
| !! | TCGGAACAGGTTGGTTCAGA+TGG | + | chr4.4:67309676-67309695 | MS.gene77679:CDS | 50.0% |
| AGCAAGCAAACGGGCAAGAG+TGG | + | chr4.4:67311502-67311521 | MS.gene77679:CDS | 55.0% | |
| GAGGCTCCTGAAAAACCTCC+TGG | + | chr4.4:67311344-67311363 | MS.gene77679:CDS | 55.0% | |
| GATGGGTCTGTGGAATGTGG+GGG | + | chr4.4:67308729-67308748 | MS.gene77679:CDS | 55.0% | |
| GCAGGTTTGTCGGCAGCTAT+TGG | + | chr4.4:67309505-67309524 | MS.gene77679:CDS | 55.0% | |
| GCCCACTCAGATGCATCTGA+GGG | - | chr4.4:67309922-67309941 | None:intergenic | 55.0% | |
| GGGACTCCAGATTCTCGAGA+CGG | + | chr4.4:67310630-67310649 | MS.gene77679:CDS | 55.0% | |
| TGAAGTAACCGGGTGCGCTA+CGG | - | chr4.4:67308817-67308836 | None:intergenic | 55.0% | |
| TGCCCACTCAGATGCATCTG+AGG | - | chr4.4:67309923-67309942 | None:intergenic | 55.0% | |
| TGTCCGTGTCCATGCTTCAC+AGG | + | chr4.4:67309449-67309468 | MS.gene77679:intron | 55.0% | |
| ! | GGCCTACGATTAACTTGGGC+TGG | - | chr4.4:67311287-67311306 | None:intergenic | 55.0% |
| ! | GGTTGGTTCAGATGGTGGTC+GGG | + | chr4.4:67309684-67309703 | MS.gene77679:CDS | 55.0% |
| !! | CGATTAACTTGGGCTGGCTC+TGG | - | chr4.4:67311281-67311300 | None:intergenic | 55.0% |
| !! | GTCGGCAGCTATTGGTAGTG+AGG | + | chr4.4:67309513-67309532 | MS.gene77679:CDS | 55.0% |
| AGAACCTACCCATGGTGGCC+TGG | + | chr4.4:67309883-67309902 | MS.gene77679:CDS | 60.0% | |
| !! | AAGTGTCGGTGTCGGACGCT+GGG | - | chr4.4:67309374-67309393 | None:intergenic | 60.0% |
| CTGTCCAGGCCACCATGGGT+AGG | - | chr4.4:67309890-67309909 | None:intergenic | 65.0% | |
| !! | CAAGTGTCGGTGTCGGACGC+TGG | - | chr4.4:67309375-67309394 | None:intergenic | 65.0% |
| !! | TGTTAAGGGTGCTGGGGCCG+TGG | + | chr4.4:67308785-67308804 | MS.gene77679:CDS | 65.0% |
| AACCGGGTGCGCTACGGCCA+CGG | - | chr4.4:67308811-67308830 | None:intergenic | 70.0% | |
| GTGCGCTACGGCCACGGCCA+CGG | - | chr4.4:67308805-67308824 | None:intergenic | 75.0% | |
| ! | GGCCGTGGCCGTAGCGCACC+CGG | + | chr4.4:67308806-67308825 | MS.gene77679:CDS | 80.0% |
| !!! | GGGTGCTGGGGCCGTGGCCG+TGG | + | chr4.4:67308791-67308810 | MS.gene77679:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 67308636 | 67311664 | 67308636 | ID=MS.gene77679 |
| chr4.4 | mRNA | 67308636 | 67311664 | 67308636 | ID=MS.gene77679.t1;Parent=MS.gene77679 |
| chr4.4 | exon | 67308636 | 67309239 | 67308636 | ID=MS.gene77679.t1.exon1;Parent=MS.gene77679.t1 |
| chr4.4 | CDS | 67308636 | 67309239 | 67308636 | ID=cds.MS.gene77679.t1;Parent=MS.gene77679.t1 |
| chr4.4 | exon | 67309479 | 67311664 | 67309479 | ID=MS.gene77679.t1.exon2;Parent=MS.gene77679.t1 |
| chr4.4 | CDS | 67309479 | 67311664 | 67309479 | ID=cds.MS.gene77679.t1;Parent=MS.gene77679.t1 |
| Gene Sequence |
| Protein sequence |
