Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78320.t1 | XP_013467265.1 | 83 | 582 | 93 | 4 | 1 | 581 | 1 | 577 | 3.80E-274 | 953.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78320.t1 | Q5XQC7 | 68.0 | 581 | 175 | 5 | 1 | 572 | 1 | 579 | 9.7e-226 | 784.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78320.t1 | A0A072VGY2 | 83.0 | 582 | 93 | 4 | 1 | 581 | 1 | 577 | 2.8e-274 | 953.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000424 | MS.gene78320 | PPI |
| MS.gene030511 | MS.gene78320 | PPI |
| MS.gene78320 | MS.gene70112 | PPI |
| MS.gene78320 | MS.gene49772 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78320.t1 | MTR_1g048160 | 82.990 | 582 | 93 | 4 | 1 | 581 | 1 | 577 | 0.0 | 997 |
| MS.gene78320.t1 | MTR_7g114130 | 82.222 | 585 | 98 | 4 | 1 | 582 | 1 | 582 | 0.0 | 991 |
| MS.gene78320.t1 | MTR_7g114100 | 82.189 | 466 | 30 | 4 | 120 | 585 | 6 | 418 | 0.0 | 749 |
| MS.gene78320.t1 | MTR_8g096190 | 59.931 | 579 | 222 | 7 | 1 | 571 | 1 | 577 | 0.0 | 699 |
| MS.gene78320.t1 | MTR_8g096190 | 59.091 | 550 | 215 | 7 | 1 | 542 | 1 | 548 | 0.0 | 652 |
| MS.gene78320.t1 | MTR_8g096190 | 57.854 | 522 | 210 | 7 | 1 | 514 | 1 | 520 | 0.0 | 604 |
| MS.gene78320.t1 | MTR_7g033100 | 30.924 | 249 | 128 | 8 | 335 | 560 | 107 | 334 | 2.02e-22 | 100 |
| MS.gene78320.t1 | MTR_7g033100 | 30.924 | 249 | 128 | 8 | 335 | 560 | 107 | 334 | 3.79e-22 | 99.4 |
| MS.gene78320.t1 | MTR_3g086520 | 32.129 | 249 | 125 | 9 | 335 | 560 | 125 | 352 | 7.10e-21 | 96.3 |
| MS.gene78320.t1 | MTR_3g086520 | 32.129 | 249 | 125 | 9 | 335 | 560 | 125 | 352 | 7.50e-21 | 96.3 |
| MS.gene78320.t1 | MTR_3g086520 | 32.129 | 249 | 125 | 9 | 335 | 560 | 122 | 349 | 7.90e-21 | 96.3 |
| MS.gene78320.t1 | MTR_3g075530 | 30.249 | 281 | 138 | 13 | 329 | 573 | 88 | 346 | 1.95e-20 | 94.7 |
| MS.gene78320.t1 | MTR_3g096520 | 31.111 | 270 | 136 | 10 | 320 | 560 | 87 | 335 | 3.60e-20 | 94.0 |
| MS.gene78320.t1 | MTR_3g096520 | 31.111 | 270 | 136 | 10 | 320 | 560 | 87 | 335 | 3.83e-20 | 93.6 |
| MS.gene78320.t1 | MTR_3g096520 | 31.111 | 270 | 136 | 10 | 320 | 560 | 104 | 352 | 4.25e-20 | 94.0 |
| MS.gene78320.t1 | MTR_8g089670 | 30.522 | 249 | 129 | 8 | 335 | 560 | 132 | 359 | 7.77e-20 | 93.2 |
| MS.gene78320.t1 | MTR_6g021730 | 30.120 | 249 | 130 | 8 | 335 | 560 | 127 | 354 | 1.19e-19 | 92.8 |
| MS.gene78320.t1 | MTR_8g447220 | 29.437 | 231 | 122 | 7 | 335 | 547 | 80 | 287 | 1.16e-18 | 87.8 |
| MS.gene78320.t1 | MTR_8g447220 | 29.437 | 231 | 122 | 7 | 335 | 547 | 80 | 287 | 1.80e-18 | 88.2 |
| MS.gene78320.t1 | MTR_2g063843 | 28.309 | 272 | 140 | 10 | 335 | 574 | 87 | 335 | 2.05e-18 | 88.2 |
| MS.gene78320.t1 | MTR_6g092020 | 27.941 | 272 | 141 | 9 | 335 | 574 | 74 | 322 | 3.76e-18 | 87.4 |
| MS.gene78320.t1 | MTR_6g092100 | 31.282 | 195 | 106 | 5 | 335 | 513 | 29 | 211 | 1.21e-17 | 84.3 |
| MS.gene78320.t1 | MTR_2g063857 | 27.636 | 275 | 141 | 9 | 335 | 574 | 95 | 346 | 2.30e-17 | 85.1 |
| MS.gene78320.t1 | MTR_2g063907 | 27.692 | 260 | 140 | 8 | 335 | 569 | 81 | 317 | 2.68e-17 | 84.7 |
| MS.gene78320.t1 | MTR_2g063857 | 27.636 | 275 | 141 | 9 | 335 | 574 | 95 | 346 | 3.46e-17 | 84.0 |
| MS.gene78320.t1 | MTR_7g081170 | 27.439 | 164 | 100 | 4 | 364 | 518 | 85 | 238 | 6.15e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78320.t1 | AT1G08860 | 67.986 | 581 | 175 | 5 | 1 | 572 | 1 | 579 | 0.0 | 821 |
| MS.gene78320.t1 | AT5G61910 | 59.483 | 580 | 225 | 6 | 1 | 573 | 769 | 1345 | 0.0 | 697 |
| MS.gene78320.t1 | AT5G61900 | 59.483 | 580 | 225 | 6 | 1 | 573 | 1 | 577 | 0.0 | 693 |
| MS.gene78320.t1 | AT5G61900 | 59.483 | 580 | 225 | 6 | 1 | 573 | 1 | 577 | 0.0 | 693 |
| MS.gene78320.t1 | AT5G07300 | 57.168 | 579 | 235 | 7 | 1 | 569 | 1 | 576 | 0.0 | 667 |
| MS.gene78320.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 113 | 340 | 6.82e-22 | 99.4 |
| MS.gene78320.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.93e-22 | 99.0 |
| MS.gene78320.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.93e-22 | 99.0 |
| MS.gene78320.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.93e-22 | 99.0 |
| MS.gene78320.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.93e-22 | 99.0 |
| MS.gene78320.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 113 | 340 | 9.13e-22 | 98.2 |
| MS.gene78320.t1 | AT3G01650 | 30.924 | 249 | 128 | 8 | 335 | 560 | 156 | 383 | 3.85e-21 | 97.4 |
| MS.gene78320.t1 | AT3G01650 | 30.924 | 249 | 128 | 8 | 335 | 560 | 156 | 383 | 3.85e-21 | 97.4 |
| MS.gene78320.t1 | AT5G63970 | 29.897 | 291 | 151 | 12 | 320 | 579 | 16 | 284 | 6.65e-20 | 92.0 |
| MS.gene78320.t1 | AT5G63970 | 29.897 | 291 | 151 | 12 | 320 | 579 | 16 | 284 | 6.65e-20 | 92.0 |
| MS.gene78320.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.95e-20 | 92.8 |
| MS.gene78320.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.95e-20 | 92.8 |
| MS.gene78320.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.95e-20 | 92.8 |
| MS.gene78320.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.95e-20 | 92.8 |
| MS.gene78320.t1 | AT1G79380 | 28.520 | 277 | 148 | 11 | 320 | 567 | 58 | 313 | 4.45e-19 | 90.1 |
Find 116 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATCAGGACCCACTTTATT+TGG | 0.129342 | 7.4:-2892126 | MS.gene78320:CDS |
| CTCTGTTGTGCAAGCTCTTC+TGG | 0.158420 | 7.4:-2891379 | MS.gene78320:CDS |
| AGACAAACTGGTTTCCATTT+TGG | 0.164153 | 7.4:+2893967 | None:intergenic |
| TTGTAAAATCTAATGAAATT+TGG | 0.204437 | 7.4:+2891272 | None:intergenic |
| AGCAAGTAACTTGCTTGATA+TGG | 0.244073 | 7.4:-2895545 | MS.gene78320:CDS |
| CGGTTTCCTGCTTGGGGATT+TGG | 0.252676 | 7.4:-2892456 | MS.gene78320:CDS |
| AGATGGGAAATTTGAAGAAT+TGG | 0.254232 | 7.4:-2895342 | MS.gene78320:CDS |
| TGATAAGCGGTTTCCTGCTT+GGG | 0.290897 | 7.4:-2892463 | MS.gene78320:CDS |
| TGTGCAGCCAAGTTTATAAC+TGG | 0.295273 | 7.4:+2892102 | None:intergenic |
| CTTCTCTTGTCCTTTACGTT+TGG | 0.316488 | 7.4:+2893411 | None:intergenic |
| GATGGGAAATTTGAAGAATT+GGG | 0.319368 | 7.4:-2895341 | MS.gene78320:CDS |
| TTACGTAGTGTGACTCTATC+AGG | 0.343328 | 7.4:-2892141 | MS.gene78320:CDS |
| ATAACAATTTAAATCCAAAA+TGG | 0.353940 | 7.4:-2893981 | MS.gene78320:CDS |
| ATTTGGATGCTTGTGGGAAA+TGG | 0.360681 | 7.4:+2891289 | None:intergenic |
| CTGCAAGATCAAGATTTCAT+TGG | 0.370990 | 7.4:-2894642 | MS.gene78320:CDS |
| TCAAAACACTCGATAACTAA+TGG | 0.374983 | 7.4:+2893632 | None:intergenic |
| ATAACTTCAGTCTTGCAAAT+AGG | 0.376188 | 7.4:+2894006 | None:intergenic |
| ATGCTTGTGGGAAATGGGAT+TGG | 0.380235 | 7.4:+2891295 | None:intergenic |
| TGCTGGAAATTAAGACAAAC+TGG | 0.380449 | 7.4:+2893955 | None:intergenic |
| CTGATAAGCGGTTTCCTGCT+TGG | 0.381905 | 7.4:-2892464 | MS.gene78320:CDS |
| AATCATGTTCGAAGAAATCT+TGG | 0.386088 | 7.4:-2894452 | MS.gene78320:CDS |
| CTGAAGAGACTGTTGCTTCA+AGG | 0.393400 | 7.4:-2894412 | MS.gene78320:CDS |
| TTTGGATGCTTGTGGGAAAT+GGG | 0.396015 | 7.4:+2891290 | None:intergenic |
| TGCTTGTGGGAAATGGGATT+GGG | 0.401782 | 7.4:+2891296 | None:intergenic |
| TGTCTTAATTTCCAGCAGTT+TGG | 0.404098 | 7.4:-2893949 | MS.gene78320:CDS |
| TGGATTTGAACTGAACTTCA+TGG | 0.405252 | 7.4:-2893314 | MS.gene78320:CDS |
| TCTGTTGCTTTGAAGCCTTA+AGG | 0.409700 | 7.4:+2894478 | None:intergenic |
| GGTTAAGCTCCGGCTTGGTT+TGG | 0.413516 | 7.4:+2894499 | None:intergenic |
| TTGCATTACATTGACGTATC+CGG | 0.413811 | 7.4:-2893157 | MS.gene78320:CDS |
| AGCGGCAATCATGTACTTAT+CGG | 0.415633 | 7.4:-2893599 | MS.gene78320:CDS |
| TATAAACTTGGCTGCACAAA+TGG | 0.416011 | 7.4:-2892097 | MS.gene78320:CDS |
| AAAATTTGTGTAGGCTATGA+TGG | 0.427229 | 7.4:-2892517 | MS.gene78320:intron |
| GGAAGGAATTGAAGGCATAA+TGG | 0.437267 | 7.4:-2892181 | MS.gene78320:CDS |
| TCTAAAGGGTCAACTCTTTG+TGG | 0.437821 | 7.4:-2893386 | MS.gene78320:CDS |
| CAAGCCGGAGCTTAACCTTA+AGG | 0.437855 | 7.4:-2894493 | MS.gene78320:CDS |
| TATAACTGGGCCAAATAAAG+TGG | 0.438129 | 7.4:+2892116 | None:intergenic |
| CTCATAGGATGGAATTGTTA+CGG | 0.441728 | 7.4:-2891905 | MS.gene78320:intron |
| GCCATTGTTCACACAAATTG+AGG | 0.443188 | 7.4:-2896975 | MS.gene78320:intron |
| TTACTTTACTTCCAAACTGC+TGG | 0.443289 | 7.4:+2893938 | None:intergenic |
| CTTACTTTGTACTTCTCTCA+TGG | 0.444065 | 7.4:+2891609 | None:intergenic |
| TATCTTCCGTTGTTCTCGCT+TGG | 0.449110 | 7.4:-2894375 | MS.gene78320:CDS |
| ATTTGGCCCAGTTATAAACT+TGG | 0.451486 | 7.4:-2892109 | MS.gene78320:CDS |
| AACAGTCTCTTCAGCATGAA+TGG | 0.456759 | 7.4:+2894421 | None:intergenic |
| ATTCTTGATATCCTTAGAAA+AGG | 0.456825 | 7.4:+2894051 | None:intergenic |
| GTTTAGGTGGAAGGAATTGA+AGG | 0.464131 | 7.4:-2892189 | MS.gene78320:intron |
| TTTCCTGCTTGGGGATTTGG+AGG | 0.464729 | 7.4:-2892453 | MS.gene78320:CDS |
| CGAATTGTTTGAATCCAGAA+TGG | 0.467226 | 7.4:-2895301 | MS.gene78320:CDS |
| GGACAAGAGAAGGTTCTAAA+GGG | 0.468659 | 7.4:-2893400 | MS.gene78320:CDS |
| TTACTTTGTACTTCTCTCAT+GGG | 0.469535 | 7.4:+2891610 | None:intergenic |
| TCTTGTCCTTTACGTTTGGA+TGG | 0.470396 | 7.4:+2893415 | None:intergenic |
| GATTTCTTCTACACTTCTCA+AGG | 0.473447 | 7.4:-2897004 | MS.gene78320:CDS |
| AATCTGAATGGAGGAGCTCC+AGG | 0.473846 | 7.4:-2892396 | MS.gene78320:CDS |
| CCCCTATCGATACTTATAGT+TGG | 0.474223 | 7.4:-2891838 | MS.gene78320:CDS |
| GACCTCTGATAAATTGCAAC+TGG | 0.474996 | 7.4:+2894614 | None:intergenic |
| AGGACAAGAGAAGGTTCTAA+AGG | 0.477000 | 7.4:-2893401 | MS.gene78320:CDS |
| AAATGGGATTGGGAAGGAAG+TGG | 0.478749 | 7.4:+2891306 | None:intergenic |
| TCGGTTAAATTCATACCAAA+AGG | 0.481359 | 7.4:-2893134 | MS.gene78320:intron |
| TGTGGACCAATATTGTGAAA+AGG | 0.484588 | 7.4:-2893368 | MS.gene78320:CDS |
| TCGATACTTATAGTTGGTGT+TGG | 0.485807 | 7.4:-2891832 | MS.gene78320:CDS |
| GACATTGACACAACATATCA+TGG | 0.486664 | 7.4:-2895085 | MS.gene78320:CDS |
| AATGAAATTTGGATGCTTGT+GGG | 0.487108 | 7.4:+2891283 | None:intergenic |
| CTTAAGGTTAAGCTCCGGCT+TGG | 0.500067 | 7.4:+2894494 | None:intergenic |
| AGATATAAAAGGAGCGAAAG+AGG | 0.501659 | 7.4:-2897077 | MS.gene78320:CDS |
| AGTTGGAGGTGTTAATCAAA+AGG | 0.506205 | 7.4:-2897053 | MS.gene78320:CDS |
| GGTAAACAAACAAACCTTAG+TGG | 0.511032 | 7.4:+2895057 | None:intergenic |
| ATATCATGGCGTTTCCACTA+AGG | 0.515260 | 7.4:-2895071 | MS.gene78320:intron |
| AAGCTATGCAATGAGAGAAA+AGG | 0.515589 | 7.4:-2893454 | MS.gene78320:CDS |
| ATATCAAGAATGGTTGAGAG+TGG | 0.517903 | 7.4:-2894039 | MS.gene78320:CDS |
| GCGGCAATCATGTACTTATC+GGG | 0.518457 | 7.4:-2893598 | MS.gene78320:intron |
| ACCAACTATAAGTATCGATA+GGG | 0.518580 | 7.4:+2891837 | None:intergenic |
| TAGAGCTGTTATATGATGAA+AGG | 0.527003 | 7.4:+2892064 | None:intergenic |
| TAATGAAATTTGGATGCTTG+TGG | 0.527845 | 7.4:+2891282 | None:intergenic |
| TTTGCATATAGAACAAGCAT+AGG | 0.532715 | 7.4:+2895368 | None:intergenic |
| GTGTAGGCTATGATGGAGGT+TGG | 0.542603 | 7.4:-2892510 | MS.gene78320:intron |
| TCTCACACCTCAGAGCTACC+TGG | 0.544187 | 7.4:+2892378 | None:intergenic |
| AGAGCTGTTATATGATGAAA+GGG | 0.545080 | 7.4:+2892065 | None:intergenic |
| TTTATTGATTACATATCTAG+TGG | 0.548275 | 7.4:-2893334 | MS.gene78320:CDS |
| GTCATGCCATCCAAACGTAA+AGG | 0.551066 | 7.4:-2893421 | MS.gene78320:CDS |
| CAGGTACTGGATGCTGATAA+CGG | 0.552619 | 7.4:-2891691 | MS.gene78320:CDS |
| CTATGTATTGCTTATCATAA+CGG | 0.553373 | 7.4:-2892037 | MS.gene78320:intron |
| GTGCAGCCAAGTTTATAACT+GGG | 0.557398 | 7.4:+2892103 | None:intergenic |
| TTGGTATGAATTTAACCGAC+CGG | 0.559167 | 7.4:+2893138 | None:intergenic |
| AGCCGCTGATTTCACCAGCA+TGG | 0.560772 | 7.4:-2891809 | MS.gene78320:CDS |
| GATAAGCGGTTTCCTGCTTG+GGG | 0.560782 | 7.4:-2892462 | MS.gene78320:CDS |
| ATGGTTGCAATAGATTTCAC+CGG | 0.562610 | 7.4:-2893295 | MS.gene78320:intron |
| TTTCCTCCAAATCCCCAAGC+AGG | 0.578468 | 7.4:+2892450 | None:intergenic |
| TACTTTGTACTTCTCTCATG+GGG | 0.583824 | 7.4:+2891611 | None:intergenic |
| AAAGGAGCGAAAGAGGCAGT+TGG | 0.584250 | 7.4:-2897070 | MS.gene78320:CDS |
| GGAGCGAAAGAGGCAGTTGG+AGG | 0.585023 | 7.4:-2897067 | MS.gene78320:CDS |
| TGATATGGACATTACATCAA+AGG | 0.585879 | 7.4:-2895530 | MS.gene78320:intron |
| ATAGAATAGAATAGAATGGG+AGG | 0.587536 | 7.4:-2897109 | None:intergenic |
| CACCAACTATAAGTATCGAT+AGG | 0.590609 | 7.4:+2891836 | None:intergenic |
| AAATGGAGATCCTCAAAAGT+CGG | 0.595097 | 7.4:-2893185 | MS.gene78320:CDS |
| AAGGATATAGACCTCCATGC+TGG | 0.598606 | 7.4:+2891795 | None:intergenic |
| AGATCAAGATTTCATTGGAG+AGG | 0.599179 | 7.4:-2894637 | MS.gene78320:CDS |
| AGTTCTATGATTCTGATAAG+CGG | 0.602034 | 7.4:-2892476 | MS.gene78320:CDS |
| GAAGCCTTAAGGTTAAGCTC+CGG | 0.603390 | 7.4:+2894489 | None:intergenic |
| CAAACGTAAAGGACAAGAGA+AGG | 0.609536 | 7.4:-2893410 | MS.gene78320:CDS |
| ACCTCAATTTGTGTGAACAA+TGG | 0.612254 | 7.4:+2896974 | None:intergenic |
| AGATAGTGACCAAACCAAGC+CGG | 0.622761 | 7.4:-2894508 | MS.gene78320:CDS |
| GGCCAGTTGCAATTTATCAG+AGG | 0.625547 | 7.4:-2894616 | MS.gene78320:intron |
| TAGAATAGAATAGAATGGGA+GGG | 0.632465 | 7.4:-2897108 | None:intergenic |
| ATAACTGGGCCAAATAAAGT+GGG | 0.634735 | 7.4:+2892117 | None:intergenic |
| TGTGGGAAATGGGATTGGGA+AGG | 0.635038 | 7.4:+2891300 | None:intergenic |
| TGAAGGATAGCTTACACAAG+TGG | 0.638687 | 7.4:+2895236 | None:intergenic |
| TCAAGAATGGTTGAGAGTGG+AGG | 0.644600 | 7.4:-2894036 | MS.gene78320:CDS |
| CGCTGATTTCACCAGCATGG+AGG | 0.669024 | 7.4:-2891806 | MS.gene78320:intron |
| AACAAACAACAACAATGATG+CGG | 0.669599 | 7.4:-2897029 | MS.gene78320:CDS |
| CCAACTATAAGTATCGATAG+GGG | 0.681755 | 7.4:+2891838 | None:intergenic |
| TGTTATCCAAGCGAGAACAA+CGG | 0.691289 | 7.4:+2894369 | None:intergenic |
| GGATTTGGAGGAAATGTACA+CGG | 0.693954 | 7.4:-2892441 | MS.gene78320:CDS |
| ATTTGTGTAGGCTATGATGG+AGG | 0.697109 | 7.4:-2892514 | MS.gene78320:intron |
| AGGAGCTCCAGGTAGCTCTG+AGG | 0.713821 | 7.4:-2892385 | MS.gene78320:intron |
| CTCCATGCTGGTGAAATCAG+CGG | 0.720055 | 7.4:+2891807 | None:intergenic |
| ATTACATTGACGTATCCGGT+CGG | 0.743729 | 7.4:-2893153 | MS.gene78320:CDS |
| TTTGGAGGAAATGTACACGG+TGG | 0.802767 | 7.4:-2892438 | MS.gene78320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTATTTTTAAAAAAT+TGG | - | chr7.4:2895442-2895461 | MS.gene78320:intron | 0.0% |
| !! | AATAGAGATAAAATTAAAAA+GGG | + | chr7.4:2896099-2896118 | None:intergenic | 10.0% |
| !! | GTAAAAATATTTAAAAGATA+AGG | - | chr7.4:2892355-2892374 | MS.gene78320:intron | 10.0% |
| !! | TAATAGAGATAAAATTAAAA+AGG | + | chr7.4:2896100-2896119 | None:intergenic | 10.0% |
| !!! | AATACTAAATGTTTTTTTTA+CGG | - | chr7.4:2892012-2892031 | MS.gene78320:intron | 10.0% |
| !!! | TTAGTATTGATTTTATTATT+TGG | + | chr7.4:2892000-2892019 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAGAAACTACA+GGG | + | chr7.4:2891518-2891537 | None:intergenic | 15.0% |
| !! | AAAAAGAATACTATTTATGT+AGG | + | chr7.4:2893175-2893194 | None:intergenic | 15.0% |
| !! | AAAACAAAACAAAAAAATAG+TGG | - | chr7.4:2892492-2892511 | MS.gene78320:CDS | 15.0% |
| !! | AACAAAAAATTTATACTTAC+AGG | + | chr7.4:2894257-2894276 | None:intergenic | 15.0% |
| !! | AAGTCAAAATATCAATTAAA+TGG | - | chr7.4:2892146-2892165 | MS.gene78320:CDS | 15.0% |
| !! | ATAACAATTTAAATCCAAAA+TGG | - | chr7.4:2894394-2894413 | MS.gene78320:CDS | 15.0% |
| !! | TAAAAAAAAAAAGAAACTAC+AGG | + | chr7.4:2891519-2891538 | None:intergenic | 15.0% |
| !! | TTTACTTTACATATTTAACA+TGG | - | chr7.4:2896909-2896928 | MS.gene78320:intron | 15.0% |
| !! | TTTATAGTCATAAAATTGAT+TGG | + | chr7.4:2894159-2894178 | None:intergenic | 15.0% |
| !!! | AATATACTATTTGTTATTGT+TGG | - | chr7.4:2892741-2892760 | MS.gene78320:intron | 15.0% |
| !!! | ATAGTTTTTTTGTTTTGTTT+AGG | - | chr7.4:2896170-2896189 | MS.gene78320:intron | 15.0% |
| !!! | ATTATTCCTGATATTTTTTT+AGG | - | chr7.4:2895361-2895380 | MS.gene78320:CDS | 15.0% |
| !!! | CAAATTTTACAATGTTTATT+AGG | + | chr7.4:2895846-2895865 | None:intergenic | 15.0% |
| !!! | CTTAAATAGTTTTATAATGA+CGG | + | chr7.4:2894543-2894562 | None:intergenic | 15.0% |
| !!! | TATTGAAATTTTTGAAAACT+TGG | + | chr7.4:2894705-2894724 | None:intergenic | 15.0% |
| !! | AAAAAATACTAGTGATTACT+AGG | + | chr7.4:2895547-2895566 | None:intergenic | 20.0% |
| !! | AAAAATACTAGTGATTACTA+GGG | + | chr7.4:2895546-2895565 | None:intergenic | 20.0% |
| !! | AAACATTGTAAAATTTGTGT+AGG | - | chr7.4:2895849-2895868 | MS.gene78320:intron | 20.0% |
| !! | AAATTGTACTATATCTCTAA+GGG | + | chr7.4:2896857-2896876 | None:intergenic | 20.0% |
| !! | AATACTATTTATGTAGGAAT+AGG | + | chr7.4:2893169-2893188 | None:intergenic | 20.0% |
| !! | AATGTCTGTAAAAATAGAAT+TGG | + | chr7.4:2891446-2891465 | None:intergenic | 20.0% |
| !! | ATAGATTCAAAAATCAATTC+TGG | + | chr7.4:2891833-2891852 | None:intergenic | 20.0% |
| !! | ATGTCTGTAAAAATAGAATT+GGG | + | chr7.4:2891445-2891464 | None:intergenic | 20.0% |
| !! | GTCTAATGTTAAATCATATA+TGG | - | chr7.4:2894484-2894503 | MS.gene78320:CDS | 20.0% |
| !! | TAAAAAGATGTGTTTAGATA+CGG | - | chr7.4:2891871-2891890 | MS.gene78320:CDS | 20.0% |
| !! | TGAAAGACAGAATTATTATA+AGG | + | chr7.4:2893346-2893365 | None:intergenic | 20.0% |
| !! | TGCAATAATGAGAAATATTT+GGG | + | chr7.4:2893821-2893840 | None:intergenic | 20.0% |
| !! | TTCTATATGCAAAAAAAGAT+GGG | - | chr7.4:2893017-2893036 | MS.gene78320:intron | 20.0% |
| !! | TTGCAATAATGAGAAATATT+TGG | + | chr7.4:2893822-2893841 | None:intergenic | 20.0% |
| !! | TTTAATTACTTTCTCATGTA+AGG | - | chr7.4:2894666-2894685 | MS.gene78320:intron | 20.0% |
| !! | TTTGCAATAAAAACTGTTTA+TGG | - | chr7.4:2893391-2893410 | MS.gene78320:CDS | 20.0% |
| !!! | ATTCAGAAAGTATTTATCTT+TGG | - | chr7.4:2894614-2894633 | MS.gene78320:intron | 20.0% |
| !!! | TTAATTTTTTCTATCCATTC+TGG | + | chr7.4:2893091-2893110 | None:intergenic | 20.0% |
| !!! | TTTATTGATTACATATCTAG+TGG | - | chr7.4:2895041-2895060 | MS.gene78320:intron | 20.0% |
| ! | AAAAGAAGTTAAAACGATGT+AGG | + | chr7.4:2895395-2895414 | None:intergenic | 25.0% |
| ! | AAAGAAGTTAAAACGATGTA+GGG | + | chr7.4:2895394-2895413 | None:intergenic | 25.0% |
| ! | AACTTAGTCCTTAAAATTGT+AGG | - | chr7.4:2893445-2893464 | MS.gene78320:CDS | 25.0% |
| ! | AATTTCAATAACTTCTATGC+AGG | - | chr7.4:2894715-2894734 | MS.gene78320:intron | 25.0% |
| ! | ACTACTAGATTAACTTTGTA+GGG | + | chr7.4:2893692-2893711 | None:intergenic | 25.0% |
| ! | ACTTAGAACTATAATGATGT+TGG | + | chr7.4:2895592-2895611 | None:intergenic | 25.0% |
| ! | AGACAGAATTATTATAAGGT+TGG | + | chr7.4:2893342-2893361 | None:intergenic | 25.0% |
| ! | AGTAATCTTTGATCACTTAA+AGG | + | chr7.4:2892186-2892205 | None:intergenic | 25.0% |
| ! | AGTATTTATCTTTGGATTGT+CGG | - | chr7.4:2894622-2894641 | MS.gene78320:CDS | 25.0% |
| ! | ATCTGAAAGAAAGCAAAATA+AGG | + | chr7.4:2893259-2893278 | None:intergenic | 25.0% |
| ! | ATCTGTCAATGTATGTTAAA+CGG | - | chr7.4:2892273-2892292 | MS.gene78320:intron | 25.0% |
| ! | ATGCTAAGGAAATTAAAGAA+AGG | + | chr7.4:2896602-2896621 | None:intergenic | 25.0% |
| ! | ATGTATCTACTAATAGAAAG+TGG | - | chr7.4:2892406-2892425 | MS.gene78320:CDS | 25.0% |
| ! | ATTCTTGATATCCTTAGAAA+AGG | + | chr7.4:2894327-2894346 | None:intergenic | 25.0% |
| ! | ATTTCTATGTTGGTATACTA+TGG | - | chr7.4:2893841-2893860 | MS.gene78320:intron | 25.0% |
| ! | CAAATTGTACTATATCTCTA+AGG | + | chr7.4:2896858-2896877 | None:intergenic | 25.0% |
| ! | CATGATCCTAAAAAAATATC+AGG | + | chr7.4:2895370-2895389 | None:intergenic | 25.0% |
| ! | CATTATTGCAATTTCTATGT+TGG | - | chr7.4:2893831-2893850 | MS.gene78320:intron | 25.0% |
| ! | CTATGTATTGCTTATCATAA+CGG | - | chr7.4:2896338-2896357 | MS.gene78320:intron | 25.0% |
| ! | GTAATCTTTGATCACTTAAA+GGG | + | chr7.4:2892185-2892204 | None:intergenic | 25.0% |
| ! | GTTCTATATGCAAAAAAAGA+TGG | - | chr7.4:2893016-2893035 | MS.gene78320:intron | 25.0% |
| ! | TAAAATTAAAAAGGGTAACG+CGG | + | chr7.4:2896091-2896110 | None:intergenic | 25.0% |
| ! | TCTGAAAGAAAGCAAAATAA+GGG | + | chr7.4:2893258-2893277 | None:intergenic | 25.0% |
| ! | TGTCTGTAAAAATAGAATTG+GGG | + | chr7.4:2891444-2891463 | None:intergenic | 25.0% |
| ! | TTTAACAATTCATTGCAGAT+AGG | + | chr7.4:2891591-2891610 | None:intergenic | 25.0% |
| !! | AGTAATTTTGCAATTTCATC+GGG | - | chr7.4:2892075-2892094 | MS.gene78320:CDS | 25.0% |
| !! | ATGAATTTGAAACTAGTAGT+TGG | - | chr7.4:2893598-2893617 | MS.gene78320:intron | 25.0% |
| !! | ATTGTTCCTTTTCACAATAT+TGG | + | chr7.4:2895016-2895035 | None:intergenic | 25.0% |
| !! | CAAATATCAATCTTACCTTT+TGG | + | chr7.4:2895259-2895278 | None:intergenic | 25.0% |
| !! | GAGTAATTTTGCAATTTCAT+CGG | - | chr7.4:2892074-2892093 | MS.gene78320:CDS | 25.0% |
| !! | TTTCTTTAATTTCCTTAGCA+TGG | - | chr7.4:2896601-2896620 | MS.gene78320:intron | 25.0% |
| !! | TTTTACTGTCAAATTTGAAG+CGG | - | chr7.4:2891693-2891712 | MS.gene78320:intron | 25.0% |
| !!! | AAGTTGATGATTAAGAGATT+AGG | + | chr7.4:2895294-2895313 | None:intergenic | 25.0% |
| !!! | AATGTTTTTTCAGCTTCAAA+TGG | - | chr7.4:2895173-2895192 | MS.gene78320:intron | 25.0% |
| !!! | GAAATCAACTTGTTAGTTAT+CGG | + | chr7.4:2892638-2892657 | None:intergenic | 25.0% |
| !!! | GTCATTTTGTTTTTTCTTGT+AGG | - | chr7.4:2894299-2894318 | MS.gene78320:intron | 25.0% |
| !!! | GTTTTTTTGTTTTGTTTAGG+TGG | - | chr7.4:2896173-2896192 | MS.gene78320:intron | 25.0% |
| !!! | TACAATTTTAAGGACTAAGT+TGG | + | chr7.4:2893446-2893465 | None:intergenic | 25.0% |
| !!! | TGGGTTTTTTCAATTTAACA+TGG | + | chr7.4:2893802-2893821 | None:intergenic | 25.0% |
| !!! | TGTTTTGATTTCAATATCAG+CGG | - | chr7.4:2894758-2894777 | MS.gene78320:intron | 25.0% |
| !!! | TTTTCTAAGGATATCAAGAA+TGG | - | chr7.4:2894326-2894345 | MS.gene78320:intron | 25.0% |
| AAAAAAACGGAAATCAGTCA+TGG | + | chr7.4:2892968-2892987 | None:intergenic | 30.0% | |
| AAAATTTGTGTAGGCTATGA+TGG | - | chr7.4:2895858-2895877 | MS.gene78320:intron | 30.0% | |
| AACAAACAACAACAATGATG+CGG | - | chr7.4:2891346-2891365 | MS.gene78320:CDS | 30.0% | |
| AACAAAGACTAGAGAACTTT+AGG | + | chr7.4:2894839-2894858 | None:intergenic | 30.0% | |
| AATCATGTTCGAAGAAATCT+TGG | - | chr7.4:2893923-2893942 | MS.gene78320:intron | 30.0% | |
| AATGAAATTTGGATGCTTGT+GGG | + | chr7.4:2897095-2897114 | None:intergenic | 30.0% | |
| AATTAAATCCATCTCTCCAT+TGG | - | chr7.4:2893532-2893551 | MS.gene78320:intron | 30.0% | |
| ACAAAGACTAGAGAACTTTA+GGG | + | chr7.4:2894838-2894857 | None:intergenic | 30.0% | |
| AGAGCTGTTATATGATGAAA+GGG | + | chr7.4:2896313-2896332 | None:intergenic | 30.0% | |
| AGATGGGAAATTTGAAGAAT+TGG | - | chr7.4:2893033-2893052 | MS.gene78320:intron | 30.0% | |
| AGTTCTATGATTCTGATAAG+CGG | - | chr7.4:2895899-2895918 | MS.gene78320:intron | 30.0% | |
| ATAAAACAATTGACACCTAC+CGG | + | chr7.4:2895102-2895121 | None:intergenic | 30.0% | |
| ATAACTTCAGTCTTGCAAAT+AGG | + | chr7.4:2894372-2894391 | None:intergenic | 30.0% | |
| ATGAAAGACAAAAACTGATC+AGG | + | chr7.4:2897030-2897049 | None:intergenic | 30.0% | |
| ATGGATCACAATAACATTAG+AGG | - | chr7.4:2894503-2894522 | MS.gene78320:CDS | 30.0% | |
| CTACTAGATTAACTTTGTAG+GGG | + | chr7.4:2893691-2893710 | None:intergenic | 30.0% | |
| GAAACATATATATGTCAGCA+GGG | + | chr7.4:2894066-2894085 | None:intergenic | 30.0% | |
| GAAATTATTTGAGCTGTGAT+TGG | + | chr7.4:2894573-2894592 | None:intergenic | 30.0% | |
| GACTACTAGATTAACTTTGT+AGG | + | chr7.4:2893693-2893712 | None:intergenic | 30.0% | |
| GATGGGAAATTTGAAGAATT+GGG | - | chr7.4:2893034-2893053 | MS.gene78320:intron | 30.0% | |
| GGTAAGATTGATATTTGTCA+TGG | - | chr7.4:2895262-2895281 | MS.gene78320:CDS | 30.0% | |
| TAATGAAATTTGGATGCTTG+TGG | + | chr7.4:2897096-2897115 | None:intergenic | 30.0% | |
| TACTAGATTAACTTTGTAGG+GGG | + | chr7.4:2893690-2893709 | None:intergenic | 30.0% | |
| TACTCTGATAAAAGAGACAT+TGG | + | chr7.4:2895657-2895676 | None:intergenic | 30.0% | |
| TAGAGCTGTTATATGATGAA+AGG | + | chr7.4:2896314-2896333 | None:intergenic | 30.0% | |
| TCAAAACACTCGATAACTAA+TGG | + | chr7.4:2894746-2894765 | None:intergenic | 30.0% | |
| TCGGTTAAATTCATACCAAA+AGG | - | chr7.4:2895241-2895260 | MS.gene78320:intron | 30.0% | |
| TGAAACATATATATGTCAGC+AGG | + | chr7.4:2894067-2894086 | None:intergenic | 30.0% | |
| TGATATGGACATTACATCAA+AGG | - | chr7.4:2892845-2892864 | MS.gene78320:intron | 30.0% | |
| TTACTTTGTACTTCTCTCAT+GGG | + | chr7.4:2896768-2896787 | None:intergenic | 30.0% | |
| TTATACACTGTCGATGTAAA+AGG | - | chr7.4:2894110-2894129 | MS.gene78320:intron | 30.0% | |
| TTTGCATATAGAACAAGCAT+AGG | + | chr7.4:2893010-2893029 | None:intergenic | 30.0% | |
| ! | ACAAGTATTTTGCATCTATC+TGG | - | chr7.4:2895714-2895733 | MS.gene78320:intron | 30.0% |
| ! | TGATGCTAGACAATTTTACT+TGG | + | chr7.4:2896396-2896415 | None:intergenic | 30.0% |
| ! | TGTAAGAGTATAGATCGATT+TGG | + | chr7.4:2893472-2893491 | None:intergenic | 30.0% |
| ! | TTTTGTTACAATACCATTCC+CGG | - | chr7.4:2896037-2896056 | MS.gene78320:intron | 30.0% |
| !! | ACCAACTATAAGTATCGATA+GGG | + | chr7.4:2896541-2896560 | None:intergenic | 30.0% |
| !! | GATTTGGTCCTACAATTTTA+AGG | + | chr7.4:2893456-2893475 | None:intergenic | 30.0% |
| !! | GTTTTATTCACTGAAGTGAT+TGG | - | chr7.4:2895115-2895134 | MS.gene78320:intron | 30.0% |
| !! | TATTTGTTATTGTTGGAACC+TGG | - | chr7.4:2892748-2892767 | MS.gene78320:intron | 30.0% |
| !!! | ACTGCTCTTTGATTTTTTGT+TGG | + | chr7.4:2891674-2891693 | None:intergenic | 30.0% |
| !!! | TCTCACTGTTTTAATCTGAA+TGG | - | chr7.4:2895967-2895986 | MS.gene78320:intron | 30.0% |
| !!! | TTTTGTTTTGTTTAGGTGGA+AGG | - | chr7.4:2896177-2896196 | MS.gene78320:intron | 30.0% |
| AAATGGAGATCCTCAAAAGT+CGG | - | chr7.4:2895190-2895209 | MS.gene78320:intron | 35.0% | |
| AAGCTATGCAATGAGAGAAA+AGG | - | chr7.4:2894921-2894940 | MS.gene78320:intron | 35.0% | |
| ACATCTTGGACAATTACTTG+TGG | - | chr7.4:2892771-2892790 | MS.gene78320:intron | 35.0% | |
| ACCTCAATTTGTGTGAACAA+TGG | + | chr7.4:2891404-2891423 | None:intergenic | 35.0% | |
| ACTGAGATACATCATGGATA+TGG | - | chr7.4:2895474-2895493 | MS.gene78320:intron | 35.0% | |
| AGACATGTTGTGTTCAAAGA+TGG | + | chr7.4:2894468-2894487 | None:intergenic | 35.0% | |
| AGATATAAAAGGAGCGAAAG+AGG | - | chr7.4:2891298-2891317 | MS.gene78320:CDS | 35.0% | |
| AGATCAAGATTTCATTGGAG+AGG | - | chr7.4:2893738-2893757 | MS.gene78320:intron | 35.0% | |
| AGTACCAATAACATGTGCTT+TGG | - | chr7.4:2896650-2896669 | MS.gene78320:intron | 35.0% | |
| ATAACTGGGCCAAATAAAGT+GGG | + | chr7.4:2896261-2896280 | None:intergenic | 35.0% | |
| ATATCAAGAATGGTTGAGAG+TGG | - | chr7.4:2894336-2894355 | MS.gene78320:intron | 35.0% | |
| ATCCTATGAGAAGAACATCA+TGG | + | chr7.4:2896460-2896479 | None:intergenic | 35.0% | |
| ATGATGTTCTTCTCATAGGA+TGG | - | chr7.4:2896459-2896478 | MS.gene78320:intron | 35.0% | |
| ATGGTTGCAATAGATTTCAC+CGG | - | chr7.4:2895080-2895099 | MS.gene78320:CDS | 35.0% | |
| ATGTAGGAATAGGAAGATGA+AGG | + | chr7.4:2893159-2893178 | None:intergenic | 35.0% | |
| ATTTGGCCCAGTTATAAACT+TGG | - | chr7.4:2896266-2896285 | MS.gene78320:intron | 35.0% | |
| CAATGATCTCATCTAGTAGT+TGG | - | chr7.4:2893621-2893640 | MS.gene78320:CDS | 35.0% | |
| CGAATTGTTTGAATCCAGAA+TGG | - | chr7.4:2893074-2893093 | MS.gene78320:intron | 35.0% | |
| CTCATAGGATGGAATTGTTA+CGG | - | chr7.4:2896470-2896489 | MS.gene78320:intron | 35.0% | |
| CTGCAAGATCAAGATTTCAT+TGG | - | chr7.4:2893733-2893752 | MS.gene78320:intron | 35.0% | |
| CTTACTTTGTACTTCTCTCA+TGG | + | chr7.4:2896769-2896788 | None:intergenic | 35.0% | |
| GACATTGACACAACATATCA+TGG | - | chr7.4:2893290-2893309 | MS.gene78320:intron | 35.0% | |
| GATTTCTTCTACACTTCTCA+AGG | - | chr7.4:2891371-2891390 | MS.gene78320:CDS | 35.0% | |
| GGTAAACAAACAAACCTTAG+TGG | + | chr7.4:2893321-2893340 | None:intergenic | 35.0% | |
| GGTCGTCATCATTTATGAAT+AGG | + | chr7.4:2892878-2892897 | None:intergenic | 35.0% | |
| TACTTTGTACTTCTCTCATG+GGG | + | chr7.4:2896767-2896786 | None:intergenic | 35.0% | |
| TATAAACTTGGCTGCACAAA+TGG | - | chr7.4:2896278-2896297 | MS.gene78320:intron | 35.0% | |
| TATAACTGGGCCAAATAAAG+TGG | + | chr7.4:2896262-2896281 | None:intergenic | 35.0% | |
| TCAGATACTGAGATACATCA+TGG | - | chr7.4:2895468-2895487 | MS.gene78320:intron | 35.0% | |
| TGCTGGAAATTAAGACAAAC+TGG | + | chr7.4:2894423-2894442 | None:intergenic | 35.0% | |
| TGGATATGGCATGACATAAT+CGG | - | chr7.4:2895488-2895507 | MS.gene78320:intron | 35.0% | |
| TGGATTTGAACTGAACTTCA+TGG | - | chr7.4:2895061-2895080 | MS.gene78320:intron | 35.0% | |
| TGTCTTAATTTCCAGCAGTT+TGG | - | chr7.4:2894426-2894445 | MS.gene78320:CDS | 35.0% | |
| TGTGGACCAATATTGTGAAA+AGG | - | chr7.4:2895007-2895026 | MS.gene78320:intron | 35.0% | |
| TTACTTTACTTCCAAACTGC+TGG | + | chr7.4:2894440-2894459 | None:intergenic | 35.0% | |
| TTCTATACGACACAGATACT+TGG | + | chr7.4:2895772-2895791 | None:intergenic | 35.0% | |
| TTCTGAATCGATCATATCGT+TGG | + | chr7.4:2894602-2894621 | None:intergenic | 35.0% | |
| TTGCATTACATTGACGTATC+CGG | - | chr7.4:2895218-2895237 | MS.gene78320:intron | 35.0% | |
| TTGGTATGAATTTAACCGAC+CGG | + | chr7.4:2895240-2895259 | None:intergenic | 35.0% | |
| ! | GGGTGCTTTTCAGATATAAA+AGG | - | chr7.4:2891287-2891306 | MS.gene78320:CDS | 35.0% |
| ! | TAAATGATGACGACCTGAAT+TGG | - | chr7.4:2892883-2892902 | MS.gene78320:intron | 35.0% |
| ! | TCGATACTTATAGTTGGTGT+TGG | - | chr7.4:2896543-2896562 | MS.gene78320:intron | 35.0% |
| ! | TCTCATTGCATAGCTTTTCA+AGG | + | chr7.4:2894917-2894936 | None:intergenic | 35.0% |
| ! | TCTTGTAGGATCCTTTTCTA+AGG | - | chr7.4:2894313-2894332 | MS.gene78320:intron | 35.0% |
| ! | TGCTTTGGCTCAATTATTTC+AGG | - | chr7.4:2896665-2896684 | MS.gene78320:intron | 35.0% |
| !! | AGACAAACTGGTTTCCATTT+TGG | + | chr7.4:2894411-2894430 | None:intergenic | 35.0% |
| !! | AGCAAGTAACTTGCTTGATA+TGG | - | chr7.4:2892830-2892849 | MS.gene78320:intron | 35.0% |
| !! | AGTTGGAGGTGTTAATCAAA+AGG | - | chr7.4:2891322-2891341 | MS.gene78320:CDS | 35.0% |
| !! | CACCAACTATAAGTATCGAT+AGG | + | chr7.4:2896542-2896561 | None:intergenic | 35.0% |
| !! | CCAACTATAAGTATCGATAG+GGG | + | chr7.4:2896540-2896559 | None:intergenic | 35.0% |
| !!! | CACTGTTTTAATCTGAATGG+AGG | - | chr7.4:2895970-2895989 | MS.gene78320:intron | 35.0% |
| !!! | TTAAACCCCGACCTTTTTTT+TGG | + | chr7.4:2892437-2892456 | None:intergenic | 35.0% |
| AACAGTCTCTTCAGCATGAA+TGG | + | chr7.4:2893957-2893976 | None:intergenic | 40.0% | |
| AAGTGGCGAGACCAAAAAAA+AGG | - | chr7.4:2892423-2892442 | MS.gene78320:CDS | 40.0% | |
| AGCATATCATTGCCATGCTA+AGG | + | chr7.4:2896616-2896635 | None:intergenic | 40.0% | |
| AGCGGCAATCATGTACTTAT+CGG | - | chr7.4:2894776-2894795 | MS.gene78320:intron | 40.0% | |
| AGTAATTGTCCAAGATGTCC+AGG | + | chr7.4:2892769-2892788 | None:intergenic | 40.0% | |
| ATATCATGGCGTTTCCACTA+AGG | - | chr7.4:2893304-2893323 | MS.gene78320:CDS | 40.0% | |
| ATCTCTCCATTGGTATTTGG+AGG | - | chr7.4:2893542-2893561 | MS.gene78320:intron | 40.0% | |
| ATTACATTGACGTATCCGGT+CGG | - | chr7.4:2895222-2895241 | MS.gene78320:intron | 40.0% | |
| ATTCATGATAGCACGACACA+TGG | + | chr7.4:2891762-2891781 | None:intergenic | 40.0% | |
| ATTTGGATGCTTGTGGGAAA+TGG | + | chr7.4:2897089-2897108 | None:intergenic | 40.0% | |
| ATTTGTGTAGGCTATGATGG+AGG | - | chr7.4:2895861-2895880 | MS.gene78320:intron | 40.0% | |
| CAAACGTAAAGGACAAGAGA+AGG | - | chr7.4:2894965-2894984 | MS.gene78320:intron | 40.0% | |
| CCCCTATCGATACTTATAGT+TGG | - | chr7.4:2896537-2896556 | MS.gene78320:intron | 40.0% | |
| CCTCGCTTAAAAAGTTCTAC+TGG | - | chr7.4:2896708-2896727 | MS.gene78320:intron | 40.0% | |
| CTATCAGGACCCACTTTATT+TGG | - | chr7.4:2896249-2896268 | MS.gene78320:intron | 40.0% | |
| CTTCTCTTGTCCTTTACGTT+TGG | + | chr7.4:2894967-2894986 | None:intergenic | 40.0% | |
| GACCTCTGATAAATTGCAAC+TGG | + | chr7.4:2893764-2893783 | None:intergenic | 40.0% | |
| GCCATTGTTCACACAAATTG+AGG | - | chr7.4:2891400-2891419 | MS.gene78320:intron | 40.0% | |
| GGATTTGGAGGAAATGTACA+CGG | - | chr7.4:2895934-2895953 | MS.gene78320:intron | 40.0% | |
| GTCCATGATGTTCTTCTCAT+AGG | - | chr7.4:2896455-2896474 | MS.gene78320:intron | 40.0% | |
| GTGCAGCCAAGTTTATAACT+GGG | + | chr7.4:2896275-2896294 | None:intergenic | 40.0% | |
| GTGTCGTATAGAACTAGTGT+CGG | - | chr7.4:2895779-2895798 | MS.gene78320:intron | 40.0% | |
| GTTTAGGTGGAAGGAATTGA+AGG | - | chr7.4:2896186-2896205 | MS.gene78320:intron | 40.0% | |
| TCCAAATACCAATGGAGAGA+TGG | + | chr7.4:2893543-2893562 | None:intergenic | 40.0% | |
| TCCATCTCTCCATTGGTATT+TGG | - | chr7.4:2893539-2893558 | MS.gene78320:intron | 40.0% | |
| TCTAAAGGGTCAACTCTTTG+TGG | - | chr7.4:2894989-2895008 | MS.gene78320:intron | 40.0% | |
| TCTCTCCATTGGTATTTGGA+GGG | - | chr7.4:2893543-2893562 | MS.gene78320:intron | 40.0% | |
| TCTTGTCCTTTACGTTTGGA+TGG | + | chr7.4:2894963-2894982 | None:intergenic | 40.0% | |
| TGAAGGATAGCTTACACAAG+TGG | + | chr7.4:2893142-2893161 | None:intergenic | 40.0% | |
| TGAGCCAAAGCACATGTTAT+TGG | + | chr7.4:2896657-2896676 | None:intergenic | 40.0% | |
| TGATGCACATCTATACAACC+TGG | - | chr7.4:2893647-2893666 | MS.gene78320:intron | 40.0% | |
| TGTACACCTTTAGTGATGCT+TGG | - | chr7.4:2891796-2891815 | MS.gene78320:intron | 40.0% | |
| TGTGCAGCCAAGTTTATAAC+TGG | + | chr7.4:2896276-2896295 | None:intergenic | 40.0% | |
| TGTTATCCAAGCGAGAACAA+CGG | + | chr7.4:2894009-2894028 | None:intergenic | 40.0% | |
| TTACGTAGTGTGACTCTATC+AGG | - | chr7.4:2896234-2896253 | MS.gene78320:intron | 40.0% | |
| TTGCAATAGATTTCACCGGT+AGG | - | chr7.4:2895084-2895103 | MS.gene78320:CDS | 40.0% | |
| TTTGGATGCTTGTGGGAAAT+GGG | + | chr7.4:2897088-2897107 | None:intergenic | 40.0% | |
| ! | AGGACAAGAGAAGGTTCTAA+AGG | - | chr7.4:2894974-2894993 | MS.gene78320:intron | 40.0% |
| ! | CGGAAATCAGTCATGGTTTT+AGG | + | chr7.4:2892961-2892980 | None:intergenic | 40.0% |
| ! | GGAAGGAATTGAAGGCATAA+TGG | - | chr7.4:2896194-2896213 | MS.gene78320:intron | 40.0% |
| ! | GGCTCAATTATTTCAGGTAC+TGG | - | chr7.4:2896671-2896690 | MS.gene78320:intron | 40.0% |
| ! | TGCAAAGAATCCGACTTTTG+AGG | + | chr7.4:2895203-2895222 | None:intergenic | 40.0% |
| !! | ATTCTTGTGTTTTTGCCAGG+AGG | - | chr7.4:2896967-2896986 | MS.gene78320:intron | 40.0% |
| !! | CCAGTAGAACTTTTTAAGCG+AGG | + | chr7.4:2896711-2896730 | None:intergenic | 40.0% |
| !! | CTCATTCTTGTGTTTTTGCC+AGG | - | chr7.4:2896964-2896983 | MS.gene78320:intron | 40.0% |
| !! | GGACAAGAGAAGGTTCTAAA+GGG | - | chr7.4:2894975-2894994 | MS.gene78320:intron | 40.0% |
| !! | TCTGTTGCTTTGAAGCCTTA+AGG | + | chr7.4:2893900-2893919 | None:intergenic | 40.0% |
| AAAACGTTGCCAGCCAATTC+AGG | + | chr7.4:2892899-2892918 | None:intergenic | 45.0% | |
| AAATGGGATTGGGAAGGAAG+TGG | + | chr7.4:2897072-2897091 | None:intergenic | 45.0% | |
| AAGGATATAGACCTCCATGC+TGG | + | chr7.4:2896583-2896602 | None:intergenic | 45.0% | |
| ACATGGACAACATATCCTCG+AGG | + | chr7.4:2891745-2891764 | None:intergenic | 45.0% | |
| ACGACACAGATACTTGGATG+CGG | + | chr7.4:2895766-2895785 | None:intergenic | 45.0% | |
| AGATAGTGACCAAACCAAGC+CGG | - | chr7.4:2893867-2893886 | MS.gene78320:intron | 45.0% | |
| ATGCTTGTGGGAAATGGGAT+TGG | + | chr7.4:2897083-2897102 | None:intergenic | 45.0% | |
| CGAGACCAAAAAAAAGGTCG+GGG | - | chr7.4:2892429-2892448 | MS.gene78320:CDS | 45.0% | |
| CTAGTCCCTCCAAATACCAA+TGG | + | chr7.4:2893551-2893570 | None:intergenic | 45.0% | |
| GAAGCCTTAAGGTTAAGCTC+CGG | + | chr7.4:2893889-2893908 | None:intergenic | 45.0% | |
| GCAGAACCAAGCATCACTAA+AGG | + | chr7.4:2891805-2891824 | None:intergenic | 45.0% | |
| GCGAGACCAAAAAAAAGGTC+GGG | - | chr7.4:2892428-2892447 | MS.gene78320:CDS | 45.0% | |
| GCGGCAATCATGTACTTATC+GGG | - | chr7.4:2894777-2894796 | MS.gene78320:intron | 45.0% | |
| GGCCAGTTGCAATTTATCAG+AGG | - | chr7.4:2893759-2893778 | MS.gene78320:intron | 45.0% | |
| GGCGAGACCAAAAAAAAGGT+CGG | - | chr7.4:2892427-2892446 | MS.gene78320:CDS | 45.0% | |
| GTCATGCCATCCAAACGTAA+AGG | - | chr7.4:2894954-2894973 | MS.gene78320:intron | 45.0% | |
| TATCTTCCGTTGTTCTCGCT+TGG | - | chr7.4:2894000-2894019 | MS.gene78320:CDS | 45.0% | |
| TCAAGAATGGTTGAGAGTGG+AGG | - | chr7.4:2894339-2894358 | MS.gene78320:intron | 45.0% | |
| TGATAAGCGGTTTCCTGCTT+GGG | - | chr7.4:2895912-2895931 | MS.gene78320:intron | 45.0% | |
| TGCTTGTGGGAAATGGGATT+GGG | + | chr7.4:2897082-2897101 | None:intergenic | 45.0% | |
| TTGTAGGGGGAGATTTGACT+TGG | + | chr7.4:2893677-2893696 | None:intergenic | 45.0% | |
| TTGTTGGAACCTGGACATCT+TGG | - | chr7.4:2892757-2892776 | MS.gene78320:intron | 45.0% | |
| TTTGGAGGAAATGTACACGG+TGG | - | chr7.4:2895937-2895956 | MS.gene78320:intron | 45.0% | |
| ! | CTGAAGAGACTGTTGCTTCA+AGG | - | chr7.4:2893963-2893982 | MS.gene78320:CDS | 45.0% |
| ! | TGAAGCGGATTCGAGTAGTT+TGG | - | chr7.4:2891708-2891727 | MS.gene78320:intron | 45.0% |
| !! | AGTGATGCTTGGTTCTGCTT+TGG | - | chr7.4:2891807-2891826 | MS.gene78320:CDS | 45.0% |
| !! | CAGGTACTGGATGCTGATAA+CGG | - | chr7.4:2896684-2896703 | MS.gene78320:intron | 45.0% |
| !! | CTAAAATTATAAAAAAAAAA+CGG | + | chr7.4:2892981-2893000 | None:intergenic | 5.0% |
| !!! | AAATATACTATTTTTTTTTA+AGG | - | chr7.4:2892683-2892702 | MS.gene78320:intron | 5.0% |
| !!! | ATAATTATTTGATATTTTTT+TGG | + | chr7.4:2892331-2892350 | None:intergenic | 5.0% |
| AAAGGAGCGAAAGAGGCAGT+TGG | - | chr7.4:2891305-2891324 | MS.gene78320:CDS | 50.0% | |
| AATCTGAATGGAGGAGCTCC+AGG | - | chr7.4:2895979-2895998 | MS.gene78320:intron | 50.0% | |
| ACAACAGAGATCTGTCCTCC+TGG | + | chr7.4:2896985-2897004 | None:intergenic | 50.0% | |
| CAAGCCGGAGCTTAACCTTA+AGG | - | chr7.4:2893882-2893901 | MS.gene78320:intron | 50.0% | |
| CTCCATGCTGGTGAAATCAG+CGG | + | chr7.4:2896571-2896590 | None:intergenic | 50.0% | |
| CTCTGTTGTGCAAGCTCTTC+TGG | - | chr7.4:2896996-2897015 | MS.gene78320:CDS | 50.0% | |
| CTGATAAGCGGTTTCCTGCT+TGG | - | chr7.4:2895911-2895930 | MS.gene78320:intron | 50.0% | |
| CTTAAGGTTAAGCTCCGGCT+TGG | + | chr7.4:2893884-2893903 | None:intergenic | 50.0% | |
| GATAAGCGGTTTCCTGCTTG+GGG | - | chr7.4:2895913-2895932 | MS.gene78320:intron | 50.0% | |
| TGTGGGAAATGGGATTGGGA+AGG | + | chr7.4:2897078-2897097 | None:intergenic | 50.0% | |
| TTTCCTCCAAATCCCCAAGC+AGG | + | chr7.4:2895928-2895947 | None:intergenic | 50.0% | |
| TTTCCTGCTTGGGGATTTGG+AGG | - | chr7.4:2895922-2895941 | MS.gene78320:intron | 50.0% | |
| ! | GTGTAGGCTATGATGGAGGT+TGG | - | chr7.4:2895865-2895884 | MS.gene78320:intron | 50.0% |
| ! | TGATGACGACCTGAATTGGC+TGG | - | chr7.4:2892887-2892906 | MS.gene78320:intron | 50.0% |
| !! | AGTGTCGGCATTGCGTATCT+GGG | - | chr7.4:2895794-2895813 | MS.gene78320:intron | 50.0% |
| !! | GAGATTTGACTTGGCAGTCC+AGG | + | chr7.4:2893668-2893687 | None:intergenic | 50.0% |
| !! | TAGTGTCGGCATTGCGTATC+TGG | - | chr7.4:2895793-2895812 | MS.gene78320:intron | 50.0% |
| ATTCCCGGACTCTGCGTATG+CGG | - | chr7.4:2896052-2896071 | MS.gene78320:intron | 55.0% | |
| CGGTTTCCTGCTTGGGGATT+TGG | - | chr7.4:2895919-2895938 | MS.gene78320:intron | 55.0% | |
| TCTCACACCTCAGAGCTACC+TGG | + | chr7.4:2896000-2896019 | None:intergenic | 55.0% | |
| TTGGAATGTTGCGAGCCTCG+AGG | - | chr7.4:2891727-2891746 | MS.gene78320:intron | 55.0% | |
| !! | AGCCGCTGATTTCACCAGCA+TGG | - | chr7.4:2896566-2896585 | MS.gene78320:intron | 55.0% |
| !! | CGCTGATTTCACCAGCATGG+AGG | - | chr7.4:2896569-2896588 | MS.gene78320:intron | 55.0% |
| !! | GGTTAAGCTCCGGCTTGGTT+TGG | + | chr7.4:2893879-2893898 | None:intergenic | 55.0% |
| GCATACGCAGAGTCCGGGAA+TGG | + | chr7.4:2896053-2896072 | None:intergenic | 60.0% | |
| GGAGCGAAAGAGGCAGTTGG+AGG | - | chr7.4:2891308-2891327 | MS.gene78320:CDS | 60.0% | |
| TTCCCGGACTCTGCGTATGC+GGG | - | chr7.4:2896053-2896072 | MS.gene78320:intron | 60.0% | |
| ! | AGGAGCTCCAGGTAGCTCTG+AGG | - | chr7.4:2895990-2896009 | MS.gene78320:intron | 60.0% |
| CTCCCGCATACGCAGAGTCC+GGG | + | chr7.4:2896058-2896077 | None:intergenic | 65.0% | |
| GCTCCCGCATACGCAGAGTC+CGG | + | chr7.4:2896059-2896078 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 2891281 | 2897116 | 2891281 | ID=MS.gene78320 |
| chr7.4 | mRNA | 2891281 | 2897116 | 2891281 | ID=MS.gene78320.t1;Parent=MS.gene78320 |
| chr7.4 | exon | 2896976 | 2897116 | 2896976 | ID=MS.gene78320.t1.exon1;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2896976 | 2897116 | 2896976 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2895531 | 2895578 | 2895531 | ID=MS.gene78320.t1.exon2;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2895531 | 2895578 | 2895531 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2895251 | 2895396 | 2895251 | ID=MS.gene78320.t1.exon3;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2895251 | 2895396 | 2895251 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2895072 | 2895120 | 2895072 | ID=MS.gene78320.t1.exon4;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2895072 | 2895120 | 2895072 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2894617 | 2894673 | 2894617 | ID=MS.gene78320.t1.exon5;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2894617 | 2894673 | 2894617 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2894349 | 2894528 | 2894349 | ID=MS.gene78320.t1.exon6;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2894349 | 2894528 | 2894349 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2893942 | 2894076 | 2893942 | ID=MS.gene78320.t1.exon7;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2893942 | 2894076 | 2893942 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2893599 | 2893660 | 2893599 | ID=MS.gene78320.t1.exon8;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2893599 | 2893660 | 2893599 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2893296 | 2893507 | 2893296 | ID=MS.gene78320.t1.exon9;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2893296 | 2893507 | 2893296 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2893135 | 2893211 | 2893135 | ID=MS.gene78320.t1.exon10;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2893135 | 2893211 | 2893135 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2892386 | 2892526 | 2892386 | ID=MS.gene78320.t1.exon11;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2892386 | 2892526 | 2892386 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2892038 | 2892205 | 2892038 | ID=MS.gene78320.t1.exon12;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2892038 | 2892205 | 2892038 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2891807 | 2891920 | 2891807 | ID=MS.gene78320.t1.exon13;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2891807 | 2891920 | 2891807 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2891614 | 2891710 | 2891614 | ID=MS.gene78320.t1.exon14;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2891614 | 2891710 | 2891614 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| chr7.4 | exon | 2891281 | 2891411 | 2891281 | ID=MS.gene78320.t1.exon15;Parent=MS.gene78320.t1 |
| chr7.4 | CDS | 2891281 | 2891411 | 2891281 | ID=cds.MS.gene78320.t1;Parent=MS.gene78320.t1 |
| Gene Sequence |
| Protein sequence |
