Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78428.t1 | XP_013449132.1 | 99.4 | 509 | 3 | 0 | 1 | 509 | 1 | 509 | 2.00E-266 | 927.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78428.t1 | Q9M028 | 82.9 | 509 | 87 | 0 | 1 | 509 | 1 | 509 | 1.9e-238 | 826.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78428.t1 | A0A072U057 | 99.4 | 509 | 3 | 0 | 1 | 509 | 1 | 509 | 1.4e-266 | 927.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050811 | MS.gene78428 | 0.82738 | 1.62E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene78428 | -0.810028 | 1.41E-50 | -1.69E-46 |
| MS.gene054344 | MS.gene78428 | -0.809421 | 1.91E-50 | -1.69E-46 |
| MS.gene054884 | MS.gene78428 | 0.833941 | 3.99E-56 | -1.69E-46 |
| MS.gene057332 | MS.gene78428 | -0.80283 | 4.66E-49 | -1.69E-46 |
| MS.gene058076 | MS.gene78428 | 0.808751 | 2.65E-50 | -1.69E-46 |
| MS.gene058418 | MS.gene78428 | 0.810777 | 9.74E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78428.t1 | MTR_7g068440 | 99.411 | 509 | 3 | 0 | 1 | 509 | 1 | 509 | 0.0 | 1033 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78428.t1 | AT5G01460 | 86.051 | 509 | 71 | 0 | 1 | 509 | 1 | 509 | 0.0 | 897 |
| MS.gene78428.t1 | AT3G08930 | 85.658 | 509 | 73 | 0 | 1 | 509 | 1 | 509 | 0.0 | 895 |
Find 109 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATATGCATTTGTTATTT+TGG | 0.103299 | 7.4:-35290508 | MS.gene78428:CDS |
| TCCTAAATTTGTTGTTGTTT+TGG | 0.133317 | 7.4:-35294853 | MS.gene78428:CDS |
| CACTATTCAATCCAGATATT+TGG | 0.162249 | 7.4:-35292824 | MS.gene78428:intron |
| TGTAGTTTGTGCTCTTGTTT+TGG | 0.249518 | 7.4:-35294451 | MS.gene78428:CDS |
| CTTCTCCTTGCTGTGATTGC+TGG | 0.263939 | 7.4:-35291666 | MS.gene78428:CDS |
| ATTGCAGGAGCATTGGTAAA+AGG | 0.288444 | 7.4:-35294509 | MS.gene78428:intron |
| TCATCAAGCTAGATGATATC+TGG | 0.288946 | 7.4:-35291828 | MS.gene78428:CDS |
| TTATCCTTCTTTGTTCCATT+AGG | 0.300357 | 7.4:-35291464 | MS.gene78428:intron |
| CCCAAAACAACAACAAATTT+AGG | 0.305131 | 7.4:+35294852 | None:intergenic |
| ACTGCAGCCCAGGAAATATT+TGG | 0.316705 | 7.4:-35290995 | MS.gene78428:CDS |
| GCAAGAGCCACAACATATTC+AGG | 0.330487 | 7.4:+35293182 | None:intergenic |
| TTATCTGGCGAAACTTGTTT+TGG | 0.331122 | 7.4:-35292104 | MS.gene78428:CDS |
| GCTTGATGAAAACTTCATTC+AGG | 0.341400 | 7.4:+35291842 | None:intergenic |
| TGGCGAATCGGCAAGCTTGC+CGG | 0.346171 | 7.4:-35294785 | MS.gene78428:CDS |
| CACCACCTCTTTCTTCCTGA+TGG | 0.346705 | 7.4:+35292550 | None:intergenic |
| ACTAACAGTTCTTGGTTATC+TGG | 0.347817 | 7.4:-35292119 | MS.gene78428:CDS |
| CGCTCCCGATGAAGAATTTG+TGG | 0.348247 | 7.4:-35294731 | MS.gene78428:CDS |
| TCATGGGCACTAACAGTTCT+TGG | 0.361829 | 7.4:-35292127 | MS.gene78428:CDS |
| TCATCGACAGAAACATTTCC+TGG | 0.366421 | 7.4:-35293431 | MS.gene78428:CDS |
| TCTCGTCAATGTGTATCTTT+TGG | 0.380223 | 7.4:-35294916 | MS.gene78428:CDS |
| AAGTGTGACCAAATATTTCC+TGG | 0.390448 | 7.4:+35290987 | None:intergenic |
| ATTGCTGGTGCCACGATGCT+TGG | 0.402031 | 7.4:-35291651 | MS.gene78428:CDS |
| GCATCCTGATGATGTTAATC+AGG | 0.404109 | 7.4:-35294883 | MS.gene78428:CDS |
| TTTAATAGGGCTTGTTGGTA+AGG | 0.424783 | 7.4:-35293480 | MS.gene78428:intron |
| AGCAGCTGAGTCACTCCATC+AGG | 0.429898 | 7.4:-35292565 | MS.gene78428:CDS |
| GGTTATTTAATAGGGCTTGT+TGG | 0.434254 | 7.4:-35293485 | MS.gene78428:intron |
| CCACGCCTCATGTAGACAAT+TGG | 0.434421 | 7.4:+35290327 | None:intergenic |
| TAAGCCTGATTAACATCATC+AGG | 0.441453 | 7.4:+35294879 | None:intergenic |
| GATTTCGATATTGATGCTTC+CGG | 0.443060 | 7.4:-35294814 | MS.gene78428:CDS |
| ATCCAGATATTTGGTGGTGT+TGG | 0.444672 | 7.4:-35292815 | MS.gene78428:intron |
| ATTGATGCTTCCGGCGGATG+TGG | 0.444698 | 7.4:-35294805 | MS.gene78428:CDS |
| CACACTTTGCAGTCTCTTCG+TGG | 0.447665 | 7.4:-35290971 | MS.gene78428:CDS |
| GGCTGATTGTTTCAGTAGCA+TGG | 0.448920 | 7.4:-35291915 | MS.gene78428:CDS |
| GGTATTGCTTGCCTTCCACT+TGG | 0.463571 | 7.4:-35292794 | MS.gene78428:CDS |
| TTGCAGGAAGCAACCGAACT+TGG | 0.465303 | 7.4:-35292612 | MS.gene78428:intron |
| TTCATTCAGGAAAGGAGAAA+GGG | 0.467554 | 7.4:+35291855 | None:intergenic |
| CAGAAACATTTCCTGGCTCA+TGG | 0.471525 | 7.4:-35293424 | MS.gene78428:CDS |
| TTGCTGGTGCCACGATGCTT+GGG | 0.471584 | 7.4:-35291650 | MS.gene78428:CDS |
| CAAGCCACAAATTCTTCATC+GGG | 0.474465 | 7.4:+35294727 | None:intergenic |
| TCATAATAAAACATTGCAAA+AGG | 0.474869 | 7.4:+35294663 | None:intergenic |
| CTTCATTCAGGAAAGGAGAA+AGG | 0.477093 | 7.4:+35291854 | None:intergenic |
| GAGCGAGTGATAACAGCCTT+TGG | 0.477444 | 7.4:+35292746 | None:intergenic |
| GAATTACTTCATGGGATGTA+TGG | 0.478636 | 7.4:+35291608 | None:intergenic |
| CATCAAGCTAGATGATATCT+GGG | 0.482373 | 7.4:-35291827 | MS.gene78428:CDS |
| GATGTATCCACAAGGGGAAA+AGG | 0.486391 | 7.4:-35292245 | MS.gene78428:intron |
| AAATGTTAAAGCAGTAGAAA+AGG | 0.487127 | 7.4:-35292505 | MS.gene78428:intron |
| GAATGCAGGCTGAGACATCA+TGG | 0.491537 | 7.4:-35292144 | MS.gene78428:intron |
| GTGGCTCTTGCTACTATCGT+TGG | 0.492320 | 7.4:-35293170 | MS.gene78428:CDS |
| GAAGAAAGAGGTGGTGCAAA+GGG | 0.494284 | 7.4:-35292543 | MS.gene78428:CDS |
| TGCCGATTCGCCACATCCGC+CGG | 0.496600 | 7.4:+35294795 | None:intergenic |
| TGCACAAGCAACTGCAGCCC+AGG | 0.503855 | 7.4:-35291005 | MS.gene78428:CDS |
| AATAGGGCTTGTTGGTAAGG+TGG | 0.506132 | 7.4:-35293477 | MS.gene78428:intron |
| CAACAATGGCGACGATCACA+AGG | 0.506823 | 7.4:+35294955 | None:intergenic |
| TATTCAATCCAGATATTTGG+TGG | 0.510239 | 7.4:-35292821 | MS.gene78428:intron |
| TTCATTTATCCGGCGTCCAA+AGG | 0.510297 | 7.4:-35292762 | MS.gene78428:CDS |
| TTCCGGCGGATGTGGCGAAT+CGG | 0.510650 | 7.4:-35294797 | MS.gene78428:CDS |
| GGCTCATGGGGACTCAATAG+TGG | 0.514392 | 7.4:-35293410 | MS.gene78428:CDS |
| TGTTGGAAATGGTGTCCATC+AGG | 0.515578 | 7.4:-35293378 | MS.gene78428:intron |
| CACTCGCTCACAGTATATCA+AGG | 0.529085 | 7.4:-35292732 | MS.gene78428:intron |
| AGAAACATTTCCTGGCTCAT+GGG | 0.530422 | 7.4:-35293423 | MS.gene78428:CDS |
| CTATTGAGTCCCCATGAGCC+AGG | 0.533284 | 7.4:+35293413 | None:intergenic |
| AACCTTTCCTGAATATGTTG+TGG | 0.533832 | 7.4:-35293189 | MS.gene78428:CDS |
| TAATGGAACAAAGAAGGATA+AGG | 0.536667 | 7.4:+35291466 | None:intergenic |
| TGGACACCATTTCCAACACA+TGG | 0.536756 | 7.4:+35293383 | None:intergenic |
| GGTAACCCATGTGTTGGAAA+TGG | 0.537129 | 7.4:-35293389 | MS.gene78428:CDS |
| CTGACCTAATGGAACAAAGA+AGG | 0.541365 | 7.4:+35291460 | None:intergenic |
| TGCCGGCATGCTATTTATAA+CGG | 0.546728 | 7.4:-35294768 | MS.gene78428:CDS |
| ATGAAAACTTCATTCAGGAA+AGG | 0.547332 | 7.4:+35291847 | None:intergenic |
| GCAAGCCACAAATTCTTCAT+CGG | 0.550211 | 7.4:+35294726 | None:intergenic |
| GAATTTGATTGCAGGAGCAT+TGG | 0.550916 | 7.4:-35294516 | MS.gene78428:intron |
| TGATAACAGCCTTTGGACGC+CGG | 0.554963 | 7.4:+35292753 | None:intergenic |
| AATAGTGGTAACCCATGTGT+TGG | 0.566103 | 7.4:-35293395 | MS.gene78428:CDS |
| AAAATATAAGTCCAAGTGGA+AGG | 0.568623 | 7.4:+35292783 | None:intergenic |
| CAGCAATCACAGCAAGGAGA+AGG | 0.569526 | 7.4:+35291667 | None:intergenic |
| GATGAAGAATTTGTGGCTTG+CGG | 0.570260 | 7.4:-35294724 | MS.gene78428:CDS |
| TTCAGGAAAGGTTGATCGCA+TGG | 0.572091 | 7.4:+35293199 | None:intergenic |
| GGACAGTTGAATTACTTCAT+GGG | 0.574983 | 7.4:+35291600 | None:intergenic |
| CGCCGTTATAAATAGCATGC+CGG | 0.583434 | 7.4:+35294766 | None:intergenic |
| GTCCTTCATCAGAGAAAACA+TGG | 0.586302 | 7.4:-35293223 | MS.gene78428:CDS |
| GGAAGAAAGAGGTGGTGCAA+AGG | 0.591790 | 7.4:-35292544 | MS.gene78428:CDS |
| TCACTCCATCAGGAAGAAAG+AGG | 0.601247 | 7.4:-35292555 | MS.gene78428:CDS |
| AATGAAAATATAAGTCCAAG+TGG | 0.602841 | 7.4:+35292779 | None:intergenic |
| CACGATTACACATACAACAA+TGG | 0.607514 | 7.4:+35294941 | None:intergenic |
| AGCCACAACATATTCAGGAA+AGG | 0.612361 | 7.4:+35293187 | None:intergenic |
| AGTGTGACCAAATATTTCCT+GGG | 0.617043 | 7.4:+35290988 | None:intergenic |
| ATTGATGTGGATGGTGTCGA+CGG | 0.621958 | 7.4:-35294475 | MS.gene78428:CDS |
| AGCATAGTACACAAAGGTCA+AGG | 0.622320 | 7.4:+35290482 | None:intergenic |
| AGGTTCCAATTGTCTACATG+AGG | 0.625918 | 7.4:-35290332 | None:intergenic |
| TGAAGAGATGTATCCACAAG+GGG | 0.627294 | 7.4:-35292251 | MS.gene78428:CDS |
| TGGCGACGATCACAAGGGCG+AGG | 0.629057 | 7.4:+35294961 | None:intergenic |
| GACAATTGGAACCTGCCGCT+AGG | 0.629419 | 7.4:+35290341 | None:intergenic |
| TTCGATATTGATGCTTCCGG+CGG | 0.630282 | 7.4:-35294811 | MS.gene78428:CDS |
| AATGCAGGCTGAGACATCAT+GGG | 0.636310 | 7.4:-35292143 | MS.gene78428:intron |
| CTTGAAGAGATGTATCCACA+AGG | 0.638332 | 7.4:-35292253 | MS.gene78428:CDS |
| TAAGAGTGCATTGATGTGGA+TGG | 0.641219 | 7.4:-35294484 | MS.gene78428:CDS |
| GAAACATTTCCTGGCTCATG+GGG | 0.641520 | 7.4:-35293422 | MS.gene78428:CDS |
| GGATTAAGAGTGCATTGATG+TGG | 0.641890 | 7.4:-35294488 | MS.gene78428:CDS |
| TTCAGGAAAGGAGAAAGGGG+AGG | 0.650858 | 7.4:+35291859 | None:intergenic |
| TTGAAGAGATGTATCCACAA+GGG | 0.657335 | 7.4:-35292252 | MS.gene78428:CDS |
| GGACACCATTTCCAACACAT+GGG | 0.657341 | 7.4:+35293384 | None:intergenic |
| TCATTCAGGAAAGGAGAAAG+GGG | 0.658970 | 7.4:+35291856 | None:intergenic |
| CTCCATCAGGAAGAAAGAGG+TGG | 0.668498 | 7.4:-35292552 | MS.gene78428:CDS |
| TGGCACCAGCAATCACAGCA+AGG | 0.669235 | 7.4:+35291661 | None:intergenic |
| AACAATGGCGACGATCACAA+GGG | 0.669324 | 7.4:+35294956 | None:intergenic |
| TGCATAGTATGCAAATGCCG+TGG | 0.679340 | 7.4:+35291024 | None:intergenic |
| ATCAAGCTAGATGATATCTG+GGG | 0.723018 | 7.4:-35291826 | MS.gene78428:intron |
| AACGGCAGCATAGTACACAA+AGG | 0.727030 | 7.4:+35290476 | None:intergenic |
| TAGTCTCAACCCAAGCATCG+TGG | 0.738613 | 7.4:+35291641 | None:intergenic |
| ATAGTACACAAAGGTCAAGG+CGG | 0.779655 | 7.4:+35290485 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAATATAAAGAGTTT+CGG | - | chr7.4:35293981-35294000 | MS.gene78428:intron | 10.0% |
| !!! | TAAATTTTAAAATTCAAAAG+GGG | + | chr7.4:35294087-35294106 | None:intergenic | 10.0% |
| !!! | TGAATTTTAAAATTTATAAG+TGG | - | chr7.4:35294091-35294110 | MS.gene78428:intron | 10.0% |
| !!! | TTTTTTTTTGTTTTGTTTTT+TGG | - | chr7.4:35290745-35290764 | MS.gene78428:intron | 10.0% |
| !! | AAACAATAATATCTAATAGA+AGG | - | chr7.4:35294586-35294605 | MS.gene78428:intron | 15.0% |
| !! | ATTTGTTTGAAAATAAAATG+TGG | - | chr7.4:35291015-35291034 | MS.gene78428:CDS | 15.0% |
| !! | GAAAAATAATAAACTATTAC+AGG | + | chr7.4:35291966-35291985 | None:intergenic | 15.0% |
| !! | TATAAACATAATAGTATACT+TGG | + | chr7.4:35293895-35293914 | None:intergenic | 15.0% |
| !! | TTATATAATATAAAGAGCTT+CGG | - | chr7.4:35294015-35294034 | MS.gene78428:intron | 15.0% |
| !!! | AAATTTTAAAATTCAAAAGG+GGG | + | chr7.4:35294086-35294105 | None:intergenic | 15.0% |
| !!! | ATCATTTTATTTTCTGTTTT+GGG | - | chr7.4:35293742-35293761 | MS.gene78428:intron | 15.0% |
| !!! | ATTTTCTATTTGAAATTATC+AGG | - | chr7.4:35294928-35294947 | MS.gene78428:CDS | 15.0% |
| !!! | ATTTTTATTCTTACTCATTT+TGG | - | chr7.4:35292018-35292037 | MS.gene78428:intron | 15.0% |
| !!! | TTTTCTATTTGAAATTATCA+GGG | - | chr7.4:35294929-35294948 | MS.gene78428:CDS | 15.0% |
| !! | AAAATTAGTGGTTTAATATG+AGG | - | chr7.4:35291775-35291794 | MS.gene78428:intron | 20.0% |
| !! | AAATAAAATGATGAAAGTGA+CGG | + | chr7.4:35293734-35293753 | None:intergenic | 20.0% |
| !! | AAATAATAAACTATTACAGG+AGG | + | chr7.4:35291963-35291982 | None:intergenic | 20.0% |
| !! | AAGGACTTCAATTAAAAATA+TGG | + | chr7.4:35294535-35294554 | None:intergenic | 20.0% |
| !! | AGGACTTCAATTAAAAATAT+GGG | + | chr7.4:35294534-35294553 | None:intergenic | 20.0% |
| !! | AGTAAAATGCATAAAAAAGA+AGG | + | chr7.4:35294888-35294907 | None:intergenic | 20.0% |
| !! | ATGTTGTTATATTCTCTTTA+CGG | - | chr7.4:35292324-35292343 | MS.gene78428:intron | 20.0% |
| !! | GTAAAATGCATAAAAAAGAA+GGG | + | chr7.4:35294887-35294906 | None:intergenic | 20.0% |
| !! | GTCAAATAATTCAAAAACTT+GGG | + | chr7.4:35293373-35293392 | None:intergenic | 20.0% |
| !! | TAAAATGCATAAAAAAGAAG+GGG | + | chr7.4:35294886-35294905 | None:intergenic | 20.0% |
| !! | TAAAATTTATAAGTGGCAAA+AGG | - | chr7.4:35294098-35294117 | MS.gene78428:intron | 20.0% |
| !! | TAAATAGAAATAAGTTCTAC+TGG | + | chr7.4:35294665-35294684 | None:intergenic | 20.0% |
| !! | TATTGTGTGGTTATTTAATA+GGG | - | chr7.4:35291816-35291835 | MS.gene78428:intron | 20.0% |
| !! | TCATAATAAAACATTGCAAA+AGG | + | chr7.4:35290649-35290668 | None:intergenic | 20.0% |
| !! | TGTACAATTCTTTAATGATA+TGG | - | chr7.4:35292646-35292665 | MS.gene78428:intron | 20.0% |
| !! | TGTCAAATAATTCAAAAACT+TGG | + | chr7.4:35293374-35293393 | None:intergenic | 20.0% |
| !! | TTATTGTGTGGTTATTTAAT+AGG | - | chr7.4:35291815-35291834 | MS.gene78428:intron | 20.0% |
| !! | TTCTAATTGATAAACATTAC+AGG | + | chr7.4:35292300-35292319 | None:intergenic | 20.0% |
| !! | TTGTAAGTTTATCTTAGAAA+AGG | - | chr7.4:35294854-35294873 | MS.gene78428:CDS | 20.0% |
| !!! | AAGTTTTTGAATTATTTGAC+AGG | - | chr7.4:35293373-35293392 | MS.gene78428:intron | 20.0% |
| !!! | AATAGATTGAATTTGTTTGA+CGG | - | chr7.4:35291438-35291457 | MS.gene78428:intron | 20.0% |
| !!! | ATATTATTGTTTGTCGATTT+TGG | + | chr7.4:35294578-35294597 | None:intergenic | 20.0% |
| !!! | CATCATTTTATTTTCTGTTT+TGG | - | chr7.4:35293741-35293760 | MS.gene78428:intron | 20.0% |
| !!! | CTTATCGAAAATAATTTTTC+AGG | - | chr7.4:35293001-35293020 | MS.gene78428:intron | 20.0% |
| !!! | GACTTATATTTTCATTTATC+CGG | - | chr7.4:35292537-35292556 | MS.gene78428:CDS | 20.0% |
| !!! | TCAAATATTGCTGATTTTAA+AGG | - | chr7.4:35291695-35291714 | MS.gene78428:CDS | 20.0% |
| !!! | TCAATATGCATTTGTTATTT+TGG | - | chr7.4:35294801-35294820 | MS.gene78428:CDS | 20.0% |
| !!! | TGATGGATTAATAAAATTAG+TGG | - | chr7.4:35291763-35291782 | MS.gene78428:intron | 20.0% |
| !!! | TTGATTGTAATTTTATTGTG+TGG | - | chr7.4:35291803-35291822 | MS.gene78428:intron | 20.0% |
| !!! | TTTCTAAGATAAACTTACAA+CGG | + | chr7.4:35294854-35294873 | None:intergenic | 20.0% |
| !!! | TTTGCAATGTTTTATTATGA+AGG | - | chr7.4:35290649-35290668 | MS.gene78428:intron | 20.0% |
| !!! | TTTTGGATTTGAAATGTTTT+TGG | - | chr7.4:35290762-35290781 | MS.gene78428:intron | 20.0% |
| ! | AAAATGCATAAAAAAGAAGG+GGG | + | chr7.4:35294885-35294904 | None:intergenic | 25.0% |
| ! | AAATGTTAAAGCAGTAGAAA+AGG | - | chr7.4:35292804-35292823 | MS.gene78428:CDS | 25.0% |
| ! | AATAAAATGATGAAAGTGAC+GGG | + | chr7.4:35293733-35293752 | None:intergenic | 25.0% |
| ! | AATAGTATACTTGGAATTGA+AGG | + | chr7.4:35293886-35293905 | None:intergenic | 25.0% |
| ! | AATGAAAATATAAGTCCAAG+TGG | + | chr7.4:35292533-35292552 | None:intergenic | 25.0% |
| ! | AGTCAAAAACTAAACCAATT+TGG | + | chr7.4:35294716-35294735 | None:intergenic | 25.0% |
| ! | AGTTACTAGTTACCAAAATA+AGG | + | chr7.4:35294449-35294468 | None:intergenic | 25.0% |
| ! | GGACTTCAATTAAAAATATG+GGG | + | chr7.4:35294533-35294552 | None:intergenic | 25.0% |
| ! | GTCAAAAACTAAACCAATTT+GGG | + | chr7.4:35294715-35294734 | None:intergenic | 25.0% |
| !! | AACTCTTTTCTGTTTAATGT+GGG | - | chr7.4:35293820-35293839 | MS.gene78428:intron | 25.0% |
| !! | ATTTTCAAACAAATCCAATC+AGG | + | chr7.4:35291009-35291028 | None:intergenic | 25.0% |
| !! | TGTTATTTATGACTAGTGTT+TGG | - | chr7.4:35291740-35291759 | MS.gene78428:intron | 25.0% |
| !! | TTTTCAAACAAATCCAATCA+GGG | + | chr7.4:35291008-35291027 | None:intergenic | 25.0% |
| !!! | AAATATGGGGTTTTATCAAA+TGG | + | chr7.4:35294520-35294539 | None:intergenic | 25.0% |
| !!! | AATATGGGGTTTTATCAAAT+GGG | + | chr7.4:35294519-35294538 | None:intergenic | 25.0% |
| !!! | CATGACATGTTTTAATCAAA+AGG | - | chr7.4:35294639-35294658 | MS.gene78428:intron | 25.0% |
| !!! | CCTAAATTTGTTGTTGTTTT+GGG | - | chr7.4:35290457-35290476 | MS.gene78428:intron | 25.0% |
| !!! | CTTACTTTTTCCATATTAAG+AGG | + | chr7.4:35291481-35291500 | None:intergenic | 25.0% |
| !!! | GAAGGAAGTAAATTTTAGTA+GGG | - | chr7.4:35291121-35291140 | MS.gene78428:intron | 25.0% |
| !!! | GCTTTTATTGCGTTATTTTT+AGG | - | chr7.4:35292854-35292873 | MS.gene78428:intron | 25.0% |
| !!! | TCCTAAATTTGTTGTTGTTT+TGG | - | chr7.4:35290456-35290475 | MS.gene78428:intron | 25.0% |
| !!! | TGTGTTATGCTGATTTTAAT+AGG | - | chr7.4:35293580-35293599 | MS.gene78428:intron | 25.0% |
| !!! | TTTATTGCGTTATTTTTAGG+TGG | - | chr7.4:35292857-35292876 | MS.gene78428:intron | 25.0% |
| !!! | TTTGAAGCAAGGTTTTATAA+AGG | + | chr7.4:35294554-35294573 | None:intergenic | 25.0% |
| !!! | TTTTGCTTTTTTACCAAGTT+CGG | + | chr7.4:35292713-35292732 | None:intergenic | 25.0% |
| AAAACTGAATCACACTGAAA+AGG | + | chr7.4:35294262-35294281 | None:intergenic | 30.0% | |
| AAAATATAAGTCCAAGTGGA+AGG | + | chr7.4:35292529-35292548 | None:intergenic | 30.0% | |
| AAAATCAAGAAGCTCCAAAT+TGG | + | chr7.4:35291558-35291577 | None:intergenic | 30.0% | |
| AAACAACAAAACTTTCAGCA+AGG | + | chr7.4:35294237-35294256 | None:intergenic | 30.0% | |
| AAATTCAATCTATTCCTGAC+AGG | + | chr7.4:35291432-35291451 | None:intergenic | 30.0% | |
| AACACATACAGTTGAAGTTT+GGG | - | chr7.4:35292920-35292939 | MS.gene78428:intron | 30.0% | |
| AACAGTGTTCTACATAGTTA+AGG | - | chr7.4:35294175-35294194 | MS.gene78428:intron | 30.0% | |
| AATGCATTTGGGTCAATAAT+TGG | - | chr7.4:35291051-35291070 | MS.gene78428:intron | 30.0% | |
| ATGAAAACTTCATTCAGGAA+AGG | + | chr7.4:35293465-35293484 | None:intergenic | 30.0% | |
| CACTATTCAATCCAGATATT+TGG | - | chr7.4:35292485-35292504 | MS.gene78428:intron | 30.0% | |
| CAGACATGTACAGTAAAAAT+TGG | - | chr7.4:35294616-35294635 | MS.gene78428:intron | 30.0% | |
| CCCAAAACAACAACAAATTT+AGG | + | chr7.4:35290460-35290479 | None:intergenic | 30.0% | |
| CTGCTTTAGTTGCTAATATT+GGG | - | chr7.4:35291400-35291419 | MS.gene78428:intron | 30.0% | |
| GGGAAGATGGAAAAATAATA+AGG | + | chr7.4:35294499-35294518 | None:intergenic | 30.0% | |
| GTGAGTTAGTATAATTGAAG+TGG | - | chr7.4:35291651-35291670 | MS.gene78428:CDS | 30.0% | |
| TAACACATACAGTTGAAGTT+TGG | - | chr7.4:35292919-35292938 | MS.gene78428:intron | 30.0% | |
| TAATGGAACAAAGAAGGATA+AGG | + | chr7.4:35293846-35293865 | None:intergenic | 30.0% | |
| TAGTTTAGTGAATGAGTCTT+GGG | - | chr7.4:35291184-35291203 | MS.gene78428:intron | 30.0% | |
| TATTCAATCCAGATATTTGG+TGG | - | chr7.4:35292488-35292507 | MS.gene78428:intron | 30.0% | |
| TCAGTAATTATACATAGCTG+AGG | + | chr7.4:35293558-35293577 | None:intergenic | 30.0% | |
| TCTAAATTCTCACGTCTTAA+TGG | + | chr7.4:35291310-35291329 | None:intergenic | 30.0% | |
| TCTGCTTTAGTTGCTAATAT+TGG | - | chr7.4:35291399-35291418 | MS.gene78428:intron | 30.0% | |
| TGACTATTGTCTATTATCTG+TGG | - | chr7.4:35294731-35294750 | MS.gene78428:CDS | 30.0% | |
| TTAAAGCAGTAGAAAAGGTA+AGG | - | chr7.4:35292809-35292828 | MS.gene78428:CDS | 30.0% | |
| TTACTCATAATTCACTTTGC+AGG | - | chr7.4:35293779-35293798 | MS.gene78428:intron | 30.0% | |
| TTAGTTTAGTGAATGAGTCT+TGG | - | chr7.4:35291183-35291202 | MS.gene78428:intron | 30.0% | |
| TTATCCTTCTTTGTTCCATT+AGG | - | chr7.4:35293845-35293864 | MS.gene78428:intron | 30.0% | |
| TTCGAGTGATTAATGCATTT+GGG | - | chr7.4:35291040-35291059 | MS.gene78428:CDS | 30.0% | |
| ! | AAAATGGTGATGATACTGTT+GGG | - | chr7.4:35294051-35294070 | MS.gene78428:intron | 30.0% |
| ! | AAACACACACTAAGTGTTTT+TGG | - | chr7.4:35291628-35291647 | MS.gene78428:CDS | 30.0% |
| ! | AACACACACTAAGTGTTTTT+GGG | - | chr7.4:35291629-35291648 | MS.gene78428:CDS | 30.0% |
| ! | AACTTGGGTTAGATATTACA+TGG | + | chr7.4:35293358-35293377 | None:intergenic | 30.0% |
| ! | ACTTGGGTTAGATATTACAT+GGG | + | chr7.4:35293357-35293376 | None:intergenic | 30.0% |
| ! | CTATTTGAAATTATCAGGGA+TGG | - | chr7.4:35294933-35294952 | MS.gene78428:CDS | 30.0% |
| ! | GAACTCTTTTCTGTTTAATG+TGG | - | chr7.4:35293819-35293838 | MS.gene78428:intron | 30.0% |
| ! | TCAGTTGAAGTGTATTTTCA+AGG | - | chr7.4:35290963-35290982 | MS.gene78428:CDS | 30.0% |
| ! | TTTGGGAATTTTGTATGGTA+TGG | - | chr7.4:35290876-35290895 | MS.gene78428:intron | 30.0% |
| !! | GGAAGGAAGTAAATTTTAGT+AGG | - | chr7.4:35291120-35291139 | MS.gene78428:intron | 30.0% |
| !! | GTGTATTTTCAAGGATAAAG+AGG | - | chr7.4:35290972-35290991 | MS.gene78428:CDS | 30.0% |
| !!! | AAACTTGTTTTGGGAATTCT+AGG | - | chr7.4:35293215-35293234 | MS.gene78428:CDS | 30.0% |
| !!! | AACTTGTTTTGGGAATTCTA+GGG | - | chr7.4:35293216-35293235 | MS.gene78428:CDS | 30.0% |
| !!! | ACATTATCTGGGTTTTTTCT+GGG | - | chr7.4:35291099-35291118 | MS.gene78428:intron | 30.0% |
| !!! | CTTGTTTTGGGAATTTTGTA+TGG | - | chr7.4:35290871-35290890 | MS.gene78428:intron | 30.0% |
| !!! | TACATTATCTGGGTTTTTTC+TGG | - | chr7.4:35291098-35291117 | MS.gene78428:intron | 30.0% |
| !!! | TGAAATGTTTTTGGTGTTTG+TGG | - | chr7.4:35290771-35290790 | MS.gene78428:intron | 30.0% |
| !!! | TGTTGTTGTTTTGGGATTAT+CGG | - | chr7.4:35290465-35290484 | MS.gene78428:intron | 30.0% |
| !!! | TTGCTTACTTTTTAACTTCC+TGG | - | chr7.4:35293099-35293118 | MS.gene78428:intron | 30.0% |
| AAACTCTATAACTCAGAGCA+TGG | - | chr7.4:35293921-35293940 | MS.gene78428:intron | 35.0% | |
| AACATACGCTAGAAAGATCA+TGG | - | chr7.4:35291356-35291375 | MS.gene78428:intron | 35.0% | |
| AACCTTTCCTGAATATGTTG+TGG | - | chr7.4:35292120-35292139 | MS.gene78428:CDS | 35.0% | |
| AAGACGTGAGAATTTAGATG+CGG | - | chr7.4:35291312-35291331 | MS.gene78428:intron | 35.0% | |
| ACATACGCTAGAAAGATCAT+GGG | - | chr7.4:35291357-35291376 | MS.gene78428:intron | 35.0% | |
| ACTAACAGTTCTTGGTTATC+TGG | - | chr7.4:35293190-35293209 | MS.gene78428:CDS | 35.0% | |
| ACTAGATATAGAGTGAGACT+TGG | - | chr7.4:35291075-35291094 | MS.gene78428:intron | 35.0% | |
| ACTAGTAAATTCAGACCACA+CGG | - | chr7.4:35294466-35294485 | MS.gene78428:CDS | 35.0% | |
| AGTACAGTTGCCTCTTAATA+TGG | - | chr7.4:35291468-35291487 | MS.gene78428:CDS | 35.0% | |
| ATCAAGCTAGATGATATCTG+GGG | - | chr7.4:35293483-35293502 | MS.gene78428:intron | 35.0% | |
| ATTGGGAAGTGGTATTAAAG+TGG | - | chr7.4:35291592-35291611 | MS.gene78428:intron | 35.0% | |
| CACGATTACACATACAACAA+TGG | + | chr7.4:35290371-35290390 | None:intergenic | 35.0% | |
| CATCAAGCTAGATGATATCT+GGG | - | chr7.4:35293482-35293501 | MS.gene78428:intron | 35.0% | |
| CGGAAGAGTGAAATTCAAAA+TGG | - | chr7.4:35294035-35294054 | MS.gene78428:intron | 35.0% | |
| CTAGAAAGATCATGGGAAAT+GGG | - | chr7.4:35291364-35291383 | MS.gene78428:intron | 35.0% | |
| GAATTACTTCATGGGATGTA+TGG | + | chr7.4:35293704-35293723 | None:intergenic | 35.0% | |
| GATTTCGATATTGATGCTTC+CGG | - | chr7.4:35290495-35290514 | MS.gene78428:CDS | 35.0% | |
| GCTTGATGAAAACTTCATTC+AGG | + | chr7.4:35293470-35293489 | None:intergenic | 35.0% | |
| GGACAGTTGAATTACTTCAT+GGG | + | chr7.4:35293712-35293731 | None:intergenic | 35.0% | |
| GGCATACGATATTTATGATG+CGG | - | chr7.4:35292667-35292686 | MS.gene78428:intron | 35.0% | |
| GGTGATATTGTATGACTTAC+TGG | - | chr7.4:35294752-35294771 | MS.gene78428:CDS | 35.0% | |
| GGTTATTTAATAGGGCTTGT+TGG | - | chr7.4:35291824-35291843 | MS.gene78428:intron | 35.0% | |
| GTACTTCATATAATGCGCTA+CGG | + | chr7.4:35292429-35292448 | None:intergenic | 35.0% | |
| GTTCGAGTGATTAATGCATT+TGG | - | chr7.4:35291039-35291058 | MS.gene78428:CDS | 35.0% | |
| TAAGCCTGATTAACATCATC+AGG | + | chr7.4:35290433-35290452 | None:intergenic | 35.0% | |
| TAAGTGCTTGTTTGTCATCA+CGG | - | chr7.4:35291497-35291516 | MS.gene78428:CDS | 35.0% | |
| TACAGACTATACTGACCTAA+TGG | + | chr7.4:35293863-35293882 | None:intergenic | 35.0% | |
| TACGATATTTATGATGCGGT+TGG | - | chr7.4:35292671-35292690 | MS.gene78428:intron | 35.0% | |
| TCATAATTCACTTTGCAGGT+GGG | - | chr7.4:35293783-35293802 | MS.gene78428:intron | 35.0% | |
| TCATCAAGCTAGATGATATC+TGG | - | chr7.4:35293481-35293500 | MS.gene78428:intron | 35.0% | |
| TGTTTGTGGAATTTGATTGC+AGG | - | chr7.4:35290785-35290804 | MS.gene78428:intron | 35.0% | |
| TTCATTCAGGAAAGGAGAAA+GGG | + | chr7.4:35293457-35293476 | None:intergenic | 35.0% | |
| TTGAAGAGATGTATCCACAA+GGG | - | chr7.4:35293057-35293076 | MS.gene78428:intron | 35.0% | |
| TTTGTACAAGTGAGTTAAGC+TGG | - | chr7.4:35294370-35294389 | MS.gene78428:intron | 35.0% | |
| ! | ACAGTTACTGAAGTGTTCAT+AGG | - | chr7.4:35292954-35292973 | MS.gene78428:intron | 35.0% |
| ! | CAAAATGGTGATGATACTGT+TGG | - | chr7.4:35294050-35294069 | MS.gene78428:intron | 35.0% |
| ! | CATTACACATTGATTATGCC+AGG | + | chr7.4:35293120-35293139 | None:intergenic | 35.0% |
| ! | TAGAAAAGGTAAGGAAGTGT+TGG | - | chr7.4:35292818-35292837 | MS.gene78428:intron | 35.0% |
| ! | TCTCGTCAATGTGTATCTTT+TGG | - | chr7.4:35290393-35290412 | MS.gene78428:intron | 35.0% |
| ! | TGAGACTTGGTACATTATCT+GGG | - | chr7.4:35291088-35291107 | MS.gene78428:intron | 35.0% |
| ! | TTATGACTAGTGTTTGGTGA+TGG | - | chr7.4:35291746-35291765 | MS.gene78428:intron | 35.0% |
| ! | TTGGAGCTTCTTGATTTTCA+CGG | - | chr7.4:35291560-35291579 | MS.gene78428:intron | 35.0% |
| ! | TTTTTCCCAACTCTCCAATT+TGG | - | chr7.4:35291541-35291560 | MS.gene78428:intron | 35.0% |
| !! | CTGATTTTAATAGGTCTGCT+TGG | - | chr7.4:35293589-35293608 | MS.gene78428:intron | 35.0% |
| !! | GGTTTTATCAAATGGGAAGA+TGG | + | chr7.4:35294512-35294531 | None:intergenic | 35.0% |
| !! | GTAAGGTGGATTTTACTGTT+AGG | - | chr7.4:35291846-35291865 | MS.gene78428:CDS | 35.0% |
| !! | GTTTTATTATGAAGGAGACC+AGG | - | chr7.4:35290657-35290676 | MS.gene78428:intron | 35.0% |
| !! | TATCTGGCGAAACTTGTTTT+GGG | - | chr7.4:35293206-35293225 | MS.gene78428:CDS | 35.0% |
| !! | TGTAGTTTGTGCTCTTGTTT+TGG | - | chr7.4:35290858-35290877 | MS.gene78428:intron | 35.0% |
| !! | TTATCTGGCGAAACTTGTTT+TGG | - | chr7.4:35293205-35293224 | MS.gene78428:CDS | 35.0% |
| !! | TTTAATAGGGCTTGTTGGTA+AGG | - | chr7.4:35291829-35291848 | MS.gene78428:CDS | 35.0% |
| !! | TTTTAGGTGGATATCCTTGT+TGG | - | chr7.4:35292870-35292889 | MS.gene78428:intron | 35.0% |
| !!! | CTTACTGGTTTTCACATTAC+AGG | - | chr7.4:35294767-35294786 | MS.gene78428:CDS | 35.0% |
| !!! | GTAGTTTGTGCTCTTGTTTT+GGG | - | chr7.4:35290859-35290878 | MS.gene78428:intron | 35.0% |
| !!! | TCGATTTTGGTTTTGAAGCA+AGG | + | chr7.4:35294565-35294584 | None:intergenic | 35.0% |
| AAGCTCCAAATTGGAGAGTT+GGG | + | chr7.4:35291549-35291568 | None:intergenic | 40.0% | |
| AATAGTGGTAACCCATGTGT+TGG | - | chr7.4:35291914-35291933 | MS.gene78428:CDS | 40.0% | |
| ACCTATGCTGAATATGAAGC+AGG | + | chr7.4:35292220-35292239 | None:intergenic | 40.0% | |
| ACCTGCTTCATATTCAGCAT+AGG | - | chr7.4:35292216-35292235 | MS.gene78428:intron | 40.0% | |
| AGAAACATTTCCTGGCTCAT+GGG | - | chr7.4:35291886-35291905 | MS.gene78428:CDS | 40.0% | |
| AGCATAGTACACAAAGGTCA+AGG | + | chr7.4:35294830-35294849 | None:intergenic | 40.0% | |
| AGCCACAACATATTCAGGAA+AGG | + | chr7.4:35292125-35292144 | None:intergenic | 40.0% | |
| AGGATAATGTGAACCCTGAT+TGG | - | chr7.4:35290992-35291011 | MS.gene78428:CDS | 40.0% | |
| ATAGTACACAAAGGTCAAGG+CGG | + | chr7.4:35294827-35294846 | None:intergenic | 40.0% | |
| CAAAAACTACCTACTTGTCC+TGG | + | chr7.4:35290678-35290697 | None:intergenic | 40.0% | |
| CAAGCCACAAATTCTTCATC+GGG | + | chr7.4:35290585-35290604 | None:intergenic | 40.0% | |
| CATAATTCACTTTGCAGGTG+GGG | - | chr7.4:35293784-35293803 | MS.gene78428:intron | 40.0% | |
| CTCATAATTCACTTTGCAGG+TGG | - | chr7.4:35293782-35293801 | MS.gene78428:intron | 40.0% | |
| CTGACCTAATGGAACAAAGA+AGG | + | chr7.4:35293852-35293871 | None:intergenic | 40.0% | |
| CTTCATTCAGGAAAGGAGAA+AGG | + | chr7.4:35293458-35293477 | None:intergenic | 40.0% | |
| CTTGAAGAGATGTATCCACA+AGG | - | chr7.4:35293056-35293075 | MS.gene78428:intron | 40.0% | |
| GAAGCAGAAAAATGCAAACG+CGG | + | chr7.4:35293620-35293639 | None:intergenic | 40.0% | |
| GAATTTGCGAAGCTACAGTA+TGG | + | chr7.4:35291275-35291294 | None:intergenic | 40.0% | |
| GATGAAGAATTTGTGGCTTG+CGG | - | chr7.4:35290585-35290604 | MS.gene78428:intron | 40.0% | |
| GCAAGCCACAAATTCTTCAT+CGG | + | chr7.4:35290586-35290605 | None:intergenic | 40.0% | |
| GCTAGAAAGATCATGGGAAA+TGG | - | chr7.4:35291363-35291382 | MS.gene78428:intron | 40.0% | |
| GGGACAGTTGAATTACTTCA+TGG | + | chr7.4:35293713-35293732 | None:intergenic | 40.0% | |
| GGTTCCAATTGTCTACATGA+TGG | - | chr7.4:35294978-35294997 | MS.gene78428:CDS | 40.0% | |
| GTCCTTCATCAGAGAAAACA+TGG | - | chr7.4:35292086-35292105 | MS.gene78428:intron | 40.0% | |
| GTGACAGGATTAGGAAATTG+TGG | - | chr7.4:35291223-35291242 | MS.gene78428:intron | 40.0% | |
| TACAGGAGGAAAATACCTGA+TGG | + | chr7.4:35291949-35291968 | None:intergenic | 40.0% | |
| TACCAACACCACCAAATATC+TGG | + | chr7.4:35292499-35292518 | None:intergenic | 40.0% | |
| TCATCGACAGAAACATTTCC+TGG | - | chr7.4:35291878-35291897 | MS.gene78428:CDS | 40.0% | |
| TCATTCAGGAAAGGAGAAAG+GGG | + | chr7.4:35293456-35293475 | None:intergenic | 40.0% | |
| TGAAGAGATGTATCCACAAG+GGG | - | chr7.4:35293058-35293077 | MS.gene78428:intron | 40.0% | |
| TGGAGAAGAAAAAAGCCTAG+CGG | - | chr7.4:35294953-35294972 | MS.gene78428:CDS | 40.0% | |
| TTCATATAATGCGCTACGGA+AGG | + | chr7.4:35292425-35292444 | None:intergenic | 40.0% | |
| TTTCACGGTGGAATTGCATT+GGG | - | chr7.4:35291575-35291594 | MS.gene78428:intron | 40.0% | |
| ! | AGATGATATCTGGGGTATGT+TGG | - | chr7.4:35293491-35293510 | MS.gene78428:intron | 40.0% |
| ! | AGTTGGGAAAAACGTGGTTT+TGG | + | chr7.4:35291533-35291552 | None:intergenic | 40.0% |
| ! | ATCTGGGGTATGTTGGAAAT+TGG | - | chr7.4:35293498-35293517 | MS.gene78428:intron | 40.0% |
| ! | CAAAGATTGCTTTGTTACGC+AGG | - | chr7.4:35293324-35293343 | MS.gene78428:intron | 40.0% |
| ! | GAATTTGATTGCAGGAGCAT+TGG | - | chr7.4:35290793-35290812 | MS.gene78428:intron | 40.0% |
| ! | GCATCCTGATGATGTTAATC+AGG | - | chr7.4:35290426-35290445 | MS.gene78428:intron | 40.0% |
| ! | GGATTAAGAGTGCATTGATG+TGG | - | chr7.4:35290821-35290840 | MS.gene78428:intron | 40.0% |
| ! | GTCCATGTTTTCTCTGATGA+AGG | + | chr7.4:35292091-35292110 | None:intergenic | 40.0% |
| ! | GTGAGACTTGGTACATTATC+TGG | - | chr7.4:35291087-35291106 | MS.gene78428:intron | 40.0% |
| ! | TAAGAGTGCATTGATGTGGA+TGG | - | chr7.4:35290825-35290844 | MS.gene78428:intron | 40.0% |
| ! | TGCCGGCATGCTATTTATAA+CGG | - | chr7.4:35290541-35290560 | MS.gene78428:intron | 40.0% |
| ! | TGTGATTCAGTTTTGCTCCA+CGG | - | chr7.4:35294268-35294287 | MS.gene78428:intron | 40.0% |
| ! | TTTTCACGGTGGAATTGCAT+TGG | - | chr7.4:35291574-35291593 | MS.gene78428:intron | 40.0% |
| !! | ATCCAGATATTTGGTGGTGT+TGG | - | chr7.4:35292494-35292513 | MS.gene78428:intron | 40.0% |
| !! | ATTGCAGGAGCATTGGTAAA+AGG | - | chr7.4:35290800-35290819 | MS.gene78428:intron | 40.0% |
| !! | GGCAGAGTTGTACCTTATTT+TGG | - | chr7.4:35294434-35294453 | MS.gene78428:intron | 40.0% |
| !!! | TATCTGGGTTTTTTCTGGGA+AGG | - | chr7.4:35291103-35291122 | MS.gene78428:intron | 40.0% |
| !!! | TGTTTTGGGATTATCGGTTG+CGG | - | chr7.4:35290471-35290490 | MS.gene78428:intron | 40.0% |
| AACAATGGCGACGATCACAA+GGG | + | chr7.4:35290356-35290375 | None:intergenic | 45.0% | |
| AACGGCAGCATAGTACACAA+AGG | + | chr7.4:35294836-35294855 | None:intergenic | 45.0% | |
| AACTGATCCTGCATGAATGC+AGG | - | chr7.4:35293151-35293170 | MS.gene78428:intron | 45.0% | |
| AATGCAGGCTGAGACATCAT+GGG | - | chr7.4:35293166-35293185 | MS.gene78428:CDS | 45.0% | |
| AGTGTTCATAGGCAGTGTTG+TGG | - | chr7.4:35292965-35292984 | MS.gene78428:intron | 45.0% | |
| ATGATGCGGTTGGATATTGC+AGG | - | chr7.4:35292681-35292700 | MS.gene78428:intron | 45.0% | |
| CACTCGCTCACAGTATATCA+AGG | - | chr7.4:35292577-35292596 | MS.gene78428:CDS | 45.0% | |
| CAGAAACATTTCCTGGCTCA+TGG | - | chr7.4:35291885-35291904 | MS.gene78428:CDS | 45.0% | |
| CGCCGTTATAAATAGCATGC+CGG | + | chr7.4:35290546-35290565 | None:intergenic | 45.0% | |
| GAAACATTTCCTGGCTCATG+GGG | - | chr7.4:35291887-35291906 | MS.gene78428:CDS | 45.0% | |
| GAAATTGTGGTGACAGTGTG+TGG | - | chr7.4:35291236-35291255 | MS.gene78428:intron | 45.0% | |
| GAAGAAAGAGGTGGTGCAAA+GGG | - | chr7.4:35292766-35292785 | MS.gene78428:CDS | 45.0% | |
| GAAGCTCCAAATTGGAGAGT+TGG | + | chr7.4:35291550-35291569 | None:intergenic | 45.0% | |
| GATGTATCCACAAGGGGAAA+AGG | - | chr7.4:35293064-35293083 | MS.gene78428:intron | 45.0% | |
| GCAAGAGCCACAACATATTC+AGG | + | chr7.4:35292130-35292149 | None:intergenic | 45.0% | |
| GGACACCATTTCCAACACAT+GGG | + | chr7.4:35291928-35291947 | None:intergenic | 45.0% | |
| GGCTGATTGTTTCAGTAGCA+TGG | - | chr7.4:35293394-35293413 | MS.gene78428:CDS | 45.0% | |
| GGTAACCCATGTGTTGGAAA+TGG | - | chr7.4:35291920-35291939 | MS.gene78428:intron | 45.0% | |
| GTAGTCTCTGATGCCCAAAT+TGG | - | chr7.4:35294699-35294718 | MS.gene78428:CDS | 45.0% | |
| TAATAAGGCTTGTCACCGTG+TGG | + | chr7.4:35294484-35294503 | None:intergenic | 45.0% | |
| TAGTGAATGAGTCTTGGGCT+AGG | - | chr7.4:35291189-35291208 | MS.gene78428:intron | 45.0% | |
| TCACTCCATCAGGAAGAAAG+AGG | - | chr7.4:35292754-35292773 | MS.gene78428:CDS | 45.0% | |
| TCATGCAGGATCAGTTAGCA+GGG | + | chr7.4:35293147-35293166 | None:intergenic | 45.0% | |
| TCATGGGCACTAACAGTTCT+TGG | - | chr7.4:35293182-35293201 | MS.gene78428:CDS | 45.0% | |
| TGCATAGTATGCAAATGCCG+TGG | + | chr7.4:35294288-35294307 | None:intergenic | 45.0% | |
| TGGACACCATTTCCAACACA+TGG | + | chr7.4:35291929-35291948 | None:intergenic | 45.0% | |
| TGTTGGAAATGGTGTCCATC+AGG | - | chr7.4:35291931-35291950 | MS.gene78428:intron | 45.0% | |
| TTCAAAAGCCCAAGCCAACA+AGG | + | chr7.4:35292887-35292906 | None:intergenic | 45.0% | |
| TTCATGCAGGATCAGTTAGC+AGG | + | chr7.4:35293148-35293167 | None:intergenic | 45.0% | |
| TTCATTTATCCGGCGTCCAA+AGG | - | chr7.4:35292547-35292566 | MS.gene78428:CDS | 45.0% | |
| TTCGATATTGATGCTTCCGG+CGG | - | chr7.4:35290498-35290517 | MS.gene78428:CDS | 45.0% | |
| TTCGCAAATTCCGTGGCAAA+AGG | - | chr7.4:35291284-35291303 | MS.gene78428:intron | 45.0% | |
| TTGGAGAGTTGGGAAAAACG+TGG | + | chr7.4:35291539-35291558 | None:intergenic | 45.0% | |
| ! | AACTCTGCCAGTAAAAGTGC+AGG | + | chr7.4:35294423-35294442 | None:intergenic | 45.0% |
| ! | ACTCTGCCAGTAAAAGTGCA+GGG | + | chr7.4:35294422-35294441 | None:intergenic | 45.0% |
| ! | ATAACGACCTTTTCCCCTTG+TGG | + | chr7.4:35293074-35293093 | None:intergenic | 45.0% |
| ! | ATATTGGGTGTTAGCCTGTC+AGG | - | chr7.4:35291415-35291434 | MS.gene78428:intron | 45.0% |
| ! | ATTGATGTGGATGGTGTCGA+CGG | - | chr7.4:35290834-35290853 | MS.gene78428:intron | 45.0% |
| ! | CTCAGTTTGGTGACAGGATT+AGG | - | chr7.4:35291214-35291233 | MS.gene78428:intron | 45.0% |
| ! | CTTCTTCCCTGCACTTTTAC+TGG | - | chr7.4:35294413-35294432 | MS.gene78428:intron | 45.0% |
| ! | GAGCACTGTTAAGGACAAAG+AGG | + | chr7.4:35292052-35292071 | None:intergenic | 45.0% |
| ! | GAGCTTCTTGATTTTCACGG+TGG | - | chr7.4:35291563-35291582 | MS.gene78428:intron | 45.0% |
| ! | GTAAAAGTGCAGGGAAGAAG+AGG | + | chr7.4:35294413-35294432 | None:intergenic | 45.0% |
| ! | GTCTTAATGGCCTTTTGCCA+CGG | + | chr7.4:35291297-35291316 | None:intergenic | 45.0% |
| ! | TTCAGGAAAGGTTGATCGCA+TGG | + | chr7.4:35292113-35292132 | None:intergenic | 45.0% |
| !! | AATAGGGCTTGTTGGTAAGG+TGG | - | chr7.4:35291832-35291851 | MS.gene78428:CDS | 45.0% |
| !! | GAGTATGCAGAGCACTGTTA+AGG | + | chr7.4:35292061-35292080 | None:intergenic | 45.0% |
| !! | GTGGATATCCTTGTTGGCTT+GGG | - | chr7.4:35292876-35292895 | MS.gene78428:intron | 45.0% |
| !! | TAGAGCATTGCAGGTGTGTT+GGG | - | chr7.4:35291149-35291168 | MS.gene78428:intron | 45.0% |
| !!! | AGGGTTTTCTAGAGCATTGC+AGG | - | chr7.4:35291140-35291159 | MS.gene78428:intron | 45.0% |
| !!! | GGGAAAAACGTGGTTTTGGT+GGG | + | chr7.4:35291529-35291548 | None:intergenic | 45.0% |
| !!! | TGGGAAAAACGTGGTTTTGG+TGG | + | chr7.4:35291530-35291549 | None:intergenic | 45.0% |
| !!! | ATAAATTTTAAAATTCAAAA+GGG | + | chr7.4:35294088-35294107 | None:intergenic | 5.0% |
| !!! | TATAAATTTTAAAATTCAAA+AGG | + | chr7.4:35294089-35294108 | None:intergenic | 5.0% |
| CAACAATGGCGACGATCACA+AGG | + | chr7.4:35290357-35290376 | None:intergenic | 50.0% | |
| CACACTTTGCAGTCTCTTCG+TGG | - | chr7.4:35294338-35294357 | MS.gene78428:intron | 50.0% | |
| CACCACCTCTTTCTTCCTGA+TGG | + | chr7.4:35292762-35292781 | None:intergenic | 50.0% | |
| CAGCAATCACAGCAAGGAGA+AGG | + | chr7.4:35293645-35293664 | None:intergenic | 50.0% | |
| CGCTCCCGATGAAGAATTTG+TGG | - | chr7.4:35290578-35290597 | MS.gene78428:intron | 50.0% | |
| CTCCATCAGGAAGAAAGAGG+TGG | - | chr7.4:35292757-35292776 | MS.gene78428:CDS | 50.0% | |
| CTGTAGCTTCGCAAATTCCG+TGG | - | chr7.4:35291277-35291296 | MS.gene78428:intron | 50.0% | |
| GAAGAAAAAAGCCTAGCGGC+AGG | - | chr7.4:35294957-35294976 | MS.gene78428:CDS | 50.0% | |
| GAATGCAGGCTGAGACATCA+TGG | - | chr7.4:35293165-35293184 | MS.gene78428:CDS | 50.0% | |
| GAGCGAGTGATAACAGCCTT+TGG | + | chr7.4:35292566-35292585 | None:intergenic | 50.0% | |
| GATGCAGCATGGCGTTATCA+CGG | + | chr7.4:35294212-35294231 | None:intergenic | 50.0% | |
| GGAAGAAAGAGGTGGTGCAA+AGG | - | chr7.4:35292765-35292784 | MS.gene78428:CDS | 50.0% | |
| GGTATTGCTTGCCTTCCACT+TGG | - | chr7.4:35292515-35292534 | MS.gene78428:CDS | 50.0% | |
| GGTGGAATTGCATTGGGAAG+TGG | - | chr7.4:35291581-35291600 | MS.gene78428:intron | 50.0% | |
| GTGCTTGTTTGTCATCACGG+TGG | - | chr7.4:35291500-35291519 | MS.gene78428:CDS | 50.0% | |
| GTGGCTCTTGCTACTATCGT+TGG | - | chr7.4:35292139-35292158 | MS.gene78428:CDS | 50.0% | |
| TGAAGGAGACCAGGACAAGT+AGG | - | chr7.4:35290666-35290685 | MS.gene78428:intron | 50.0% | |
| TGATAACAGCCTTTGGACGC+CGG | + | chr7.4:35292559-35292578 | None:intergenic | 50.0% | |
| TTCAGGAAAGGAGAAAGGGG+AGG | + | chr7.4:35293453-35293472 | None:intergenic | 50.0% | |
| TTGCAGGAAGCAACCGAACT+TGG | - | chr7.4:35292697-35292716 | MS.gene78428:intron | 50.0% | |
| ! | CTTCTCCTTGCTGTGATTGC+TGG | - | chr7.4:35293643-35293662 | MS.gene78428:intron | 50.0% |
| ! | GGTGGATATCCTTGTTGGCT+TGG | - | chr7.4:35292875-35292894 | MS.gene78428:intron | 50.0% |
| ! | TAGGTGCTCAGTTTGGTGAC+AGG | - | chr7.4:35291208-35291227 | MS.gene78428:intron | 50.0% |
| ! | TAGTCTCAACCCAAGCATCG+TGG | + | chr7.4:35293671-35293690 | None:intergenic | 50.0% |
| !! | CTAGAGCATTGCAGGTGTGT+TGG | - | chr7.4:35291148-35291167 | MS.gene78428:intron | 50.0% |
| !! | TCAGCAAGGTTGATGCAGCA+TGG | + | chr7.4:35294223-35294242 | None:intergenic | 50.0% |
| AGCAGCTGAGTCACTCCATC+AGG | - | chr7.4:35292744-35292763 | MS.gene78428:CDS | 55.0% | |
| ATTGATGCTTCCGGCGGATG+TGG | - | chr7.4:35290504-35290523 | MS.gene78428:CDS | 55.0% | |
| CTATTGAGTCCCCATGAGCC+AGG | + | chr7.4:35291899-35291918 | None:intergenic | 55.0% | |
| GACAATTGGAACCTGCCGCT+AGG | + | chr7.4:35294971-35294990 | None:intergenic | 55.0% | |
| GGCTCATGGGGACTCAATAG+TGG | - | chr7.4:35291899-35291918 | MS.gene78428:CDS | 55.0% | |
| GTCTCAGCCTGCATTCATGC+AGG | + | chr7.4:35293161-35293180 | None:intergenic | 55.0% | |
| TGGCACCAGCAATCACAGCA+AGG | + | chr7.4:35293651-35293670 | None:intergenic | 55.0% | |
| TGTGGTGACAGTGTGTGGCA+GGG | - | chr7.4:35291241-35291260 | MS.gene78428:intron | 55.0% | |
| TTGTGGTGACAGTGTGTGGC+AGG | - | chr7.4:35291240-35291259 | MS.gene78428:intron | 55.0% | |
| ! | CTTGGGCTAGGTGCTCAGTT+TGG | - | chr7.4:35291201-35291220 | MS.gene78428:intron | 55.0% |
| ! | TGCAGGTGTGTTGGGCATTG+TGG | - | chr7.4:35291157-35291176 | MS.gene78428:intron | 55.0% |
| !! | ATTGCTGGTGCCACGATGCT+TGG | - | chr7.4:35293658-35293677 | MS.gene78428:intron | 55.0% |
| !! | TTGCTGGTGCCACGATGCTT+GGG | - | chr7.4:35293659-35293678 | MS.gene78428:intron | 55.0% |
| TGCACAAGCAACTGCAGCCC+AGG | - | chr7.4:35294304-35294323 | MS.gene78428:intron | 60.0% | |
| TGGCGAATCGGCAAGCTTGC+CGG | - | chr7.4:35290524-35290543 | MS.gene78428:intron | 60.0% | |
| TTCCGGCGGATGTGGCGAAT+CGG | - | chr7.4:35290512-35290531 | MS.gene78428:CDS | 60.0% | |
| TGGCGACGATCACAAGGGCG+AGG | + | chr7.4:35290351-35290370 | None:intergenic | 65.0% | |
| !! | TGCCGATTCGCCACATCCGC+CGG | + | chr7.4:35290517-35290536 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 35290334 | 35294997 | 35290334 | ID=MS.gene78428 |
| chr7.4 | mRNA | 35290334 | 35294997 | 35290334 | ID=MS.gene78428.t1;Parent=MS.gene78428 |
| chr7.4 | exon | 35294648 | 35294997 | 35294648 | ID=MS.gene78428.t1.exon1;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35294648 | 35294997 | 35294648 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35294439 | 35294524 | 35294439 | ID=MS.gene78428.t1.exon2;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35294439 | 35294524 | 35294439 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35293379 | 35293494 | 35293379 | ID=MS.gene78428.t1.exon3;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35293379 | 35293494 | 35293379 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35293154 | 35293264 | 35293154 | ID=MS.gene78428.t1.exon4;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35293154 | 35293264 | 35293154 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35292733 | 35292831 | 35292733 | ID=MS.gene78428.t1.exon5;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35292733 | 35292831 | 35292733 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35292506 | 35292628 | 35292506 | ID=MS.gene78428.t1.exon6;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35292506 | 35292628 | 35292506 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35292246 | 35292308 | 35292246 | ID=MS.gene78428.t1.exon7;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35292246 | 35292308 | 35292246 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35292094 | 35292158 | 35292094 | ID=MS.gene78428.t1.exon8;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35292094 | 35292158 | 35292094 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35291827 | 35291936 | 35291827 | ID=MS.gene78428.t1.exon9;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35291827 | 35291936 | 35291827 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35291615 | 35291729 | 35291615 | ID=MS.gene78428.t1.exon10;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35291615 | 35291729 | 35291615 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35291465 | 35291530 | 35291465 | ID=MS.gene78428.t1.exon11;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35291465 | 35291530 | 35291465 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35290953 | 35291063 | 35290953 | ID=MS.gene78428.t1.exon12;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35290953 | 35291063 | 35290953 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35290476 | 35290542 | 35290476 | ID=MS.gene78428.t1.exon13;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35290476 | 35290542 | 35290476 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| chr7.4 | exon | 35290334 | 35290381 | 35290334 | ID=MS.gene78428.t1.exon14;Parent=MS.gene78428.t1 |
| chr7.4 | CDS | 35290334 | 35290381 | 35290334 | ID=cds.MS.gene78428.t1;Parent=MS.gene78428.t1 |
| Gene Sequence |
| Protein sequence |
