Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054343.t1 | AES75324.1 | 89.6 | 402 | 42 | 0 | 1 | 402 | 3 | 404 | 1.40E-205 | 726.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054343.t1 | G7KIB5 | 89.6 | 402 | 42 | 0 | 1 | 402 | 3 | 404 | 9.9e-206 | 726.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050170 | MS.gene054343 | 0.824782 | 6.70E-54 | -1.69E-46 |
| MS.gene05081 | MS.gene054343 | 0.804023 | 2.64E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene054343 | 0.80715 | 5.82E-50 | -1.69E-46 |
| MS.gene053097 | MS.gene054343 | -0.818104 | 2.33E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene054344 | 0.890791 | 7.16E-74 | -1.69E-46 |
| MS.gene054343 | MS.gene05470 | 0.813515 | 2.46E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene054884 | -0.837261 | 5.77E-57 | -1.69E-46 |
| MS.gene054343 | MS.gene055719 | -0.813195 | 2.89E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene05589 | 0.817708 | 2.87E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene056266 | 0.821719 | 3.48E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene056351 | 0.800525 | 1.38E-48 | -1.69E-46 |
| MS.gene054343 | MS.gene056877 | 0.805767 | 1.14E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene057196 | 0.814167 | 1.77E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene057332 | 0.820871 | 5.45E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene058838 | 0.814209 | 1.73E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene059023 | 0.829308 | 5.53E-55 | -1.69E-46 |
| MS.gene054343 | MS.gene05914 | 0.828138 | 1.06E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene059303 | 0.814686 | 1.36E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene059512 | 0.850666 | 1.47E-60 | -1.69E-46 |
| MS.gene054343 | MS.gene061044 | -0.811697 | 6.15E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene062332 | 0.861238 | 1.18E-63 | -1.69E-46 |
| MS.gene054343 | MS.gene063115 | 0.806803 | 6.89E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene063145 | -0.804761 | 1.85E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene06369 | 0.82499 | 5.98E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene064065 | 0.811037 | 8.55E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene064396 | 0.804285 | 2.33E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene064707 | 0.804775 | 1.84E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene066030 | 0.805289 | 1.43E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene066358 | -0.836608 | 8.47E-57 | -1.69E-46 |
| MS.gene054343 | MS.gene066359 | -0.856299 | 3.53E-62 | -1.69E-46 |
| MS.gene054343 | MS.gene06655 | 0.81376 | 2.17E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene067108 | 0.828941 | 6.79E-55 | -1.69E-46 |
| MS.gene054343 | MS.gene067555 | 0.833031 | 6.73E-56 | -1.69E-46 |
| MS.gene054343 | MS.gene068074 | -0.81719 | 3.75E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene06869 | 0.818517 | 1.88E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene068820 | 0.866269 | 3.23E-65 | -1.69E-46 |
| MS.gene054343 | MS.gene069202 | 0.805069 | 1.60E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene069855 | 0.826263 | 2.99E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene070612 | 0.801903 | 7.23E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene071307 | 0.841047 | 6.02E-58 | -1.69E-46 |
| MS.gene054343 | MS.gene071308 | 0.807029 | 6.17E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene071517 | 0.850507 | 1.62E-60 | -1.69E-46 |
| MS.gene054343 | MS.gene071518 | 0.860404 | 2.11E-63 | -1.69E-46 |
| MS.gene054343 | MS.gene071519 | 0.851758 | 7.21E-61 | -1.69E-46 |
| MS.gene054343 | MS.gene072376 | -0.838296 | 3.13E-57 | -1.69E-46 |
| MS.gene054343 | MS.gene072612 | -0.8112 | 7.89E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene072928 | -0.800345 | 1.51E-48 | -1.69E-46 |
| MS.gene054343 | MS.gene07301 | 0.809382 | 1.95E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene074380 | 0.822313 | 2.53E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene08523 | 0.800706 | 1.27E-48 | -1.69E-46 |
| MS.gene054343 | MS.gene09795 | 0.836449 | 9.30E-57 | -1.69E-46 |
| MS.gene054343 | MS.gene09797 | 0.808743 | 2.67E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene09798 | 0.833396 | 5.46E-56 | -1.69E-46 |
| MS.gene054343 | MS.gene20358 | 0.817397 | 3.37E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene20856 | 0.851415 | 9.01E-61 | -1.69E-46 |
| MS.gene054343 | MS.gene20952 | 0.852032 | 6.02E-61 | -1.69E-46 |
| MS.gene054343 | MS.gene21054 | 0.813814 | 2.12E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene21094 | 0.846705 | 1.84E-59 | -1.69E-46 |
| MS.gene054343 | MS.gene21238 | 0.848118 | 7.51E-60 | -1.69E-46 |
| MS.gene054343 | MS.gene22474 | 0.833599 | 4.86E-56 | -1.69E-46 |
| MS.gene054343 | MS.gene22588 | 0.84201 | 3.36E-58 | -1.69E-46 |
| MS.gene054343 | MS.gene24024 | 0.824725 | 6.91E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene24781 | 0.901407 | 2.76E-78 | -1.69E-46 |
| MS.gene054343 | MS.gene25265 | 0.904022 | 1.89E-79 | -1.69E-46 |
| MS.gene054343 | MS.gene25658 | 0.87905 | 1.71E-69 | -1.69E-46 |
| MS.gene054343 | MS.gene25660 | 0.907851 | 3.24E-81 | -1.69E-46 |
| MS.gene054343 | MS.gene25663 | 0.901328 | 2.99E-78 | -1.69E-46 |
| MS.gene054343 | MS.gene26474 | -0.823916 | 1.07E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene26475 | -0.833832 | 4.25E-56 | -1.69E-46 |
| MS.gene054343 | MS.gene26526 | 0.820541 | 6.50E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene27920 | 0.847321 | 1.25E-59 | -1.69E-46 |
| MS.gene054343 | MS.gene29927 | 0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene054343 | MS.gene31793 | 0.800875 | 1.17E-48 | -1.69E-46 |
| MS.gene054343 | MS.gene33046 | -0.819538 | 1.10E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene33980 | -0.828672 | 7.89E-55 | -1.69E-46 |
| MS.gene054343 | MS.gene34038 | 0.816855 | 4.46E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene34472 | 0.809179 | 2.15E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene35536 | -0.841632 | 4.22E-58 | -1.69E-46 |
| MS.gene054343 | MS.gene35712 | 0.826846 | 2.17E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene35812 | 0.804767 | 1.84E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene36337 | 0.847931 | 8.46E-60 | -1.69E-46 |
| MS.gene054343 | MS.gene37999 | 0.826507 | 2.61E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene38118 | -0.83294 | 7.09E-56 | -1.69E-46 |
| MS.gene054343 | MS.gene38250 | 0.850806 | 1.34E-60 | -1.69E-46 |
| MS.gene054343 | MS.gene38252 | 0.852999 | 3.19E-61 | -1.69E-46 |
| MS.gene054343 | MS.gene38348 | 0.838014 | 3.70E-57 | -1.69E-46 |
| MS.gene054343 | MS.gene39629 | 0.801917 | 7.18E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene40377 | -0.801991 | 6.93E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene40650 | 0.838045 | 3.63E-57 | -1.69E-46 |
| MS.gene054343 | MS.gene40750 | 0.801731 | 7.84E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene40921 | 0.820838 | 5.55E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene41884 | -0.827908 | 1.21E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene42301 | 0.806332 | 8.66E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene42884 | 0.838893 | 2.19E-57 | -1.69E-46 |
| MS.gene054343 | MS.gene43151 | 0.823857 | 1.11E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene44439 | 0.871575 | 6.16E-67 | -1.69E-46 |
| MS.gene054343 | MS.gene44440 | 0.843755 | 1.15E-58 | -1.69E-46 |
| MS.gene054343 | MS.gene45607 | 0.886347 | 3.70E-72 | -1.69E-46 |
| MS.gene054343 | MS.gene46379 | -0.811272 | 7.61E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene47344 | 0.803257 | 3.80E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene47877 | 0.849926 | 2.36E-60 | -1.69E-46 |
| MS.gene054343 | MS.gene49425 | -0.804689 | 1.92E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene49971 | 0.86402 | 1.64E-64 | -1.69E-46 |
| MS.gene054343 | MS.gene51887 | 0.836037 | 1.18E-56 | -1.69E-46 |
| MS.gene054343 | MS.gene52292 | -0.823486 | 1.35E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene53390 | 0.82953 | 4.89E-55 | -1.69E-46 |
| MS.gene054343 | MS.gene54795 | 0.811385 | 7.19E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene55678 | 0.82341 | 1.41E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene55698 | 0.831316 | 1.79E-55 | -1.69E-46 |
| MS.gene054343 | MS.gene55708 | 0.824027 | 1.01E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene55899 | -0.805295 | 1.43E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene56074 | 0.860793 | 1.61E-63 | -1.69E-46 |
| MS.gene054343 | MS.gene56402 | 0.844786 | 6.09E-59 | -1.69E-46 |
| MS.gene054343 | MS.gene56403 | 0.841529 | 4.50E-58 | -1.69E-46 |
| MS.gene054343 | MS.gene57602 | 0.814699 | 1.35E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene58165 | 0.808498 | 3.01E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene58466 | 0.807447 | 5.03E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene59101 | 0.862687 | 4.25E-64 | -1.69E-46 |
| MS.gene054343 | MS.gene59475 | 0.810512 | 1.11E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene59588 | 0.846286 | 2.39E-59 | -1.69E-46 |
| MS.gene054343 | MS.gene60176 | 0.870807 | 1.10E-66 | -1.69E-46 |
| MS.gene054343 | MS.gene60177 | 0.880772 | 4.17E-70 | -1.69E-46 |
| MS.gene054343 | MS.gene61144 | 0.882265 | 1.20E-70 | -1.69E-46 |
| MS.gene054343 | MS.gene61145 | 0.842744 | 2.14E-58 | -1.69E-46 |
| MS.gene054343 | MS.gene61244 | -0.813596 | 2.36E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene62631 | -0.820113 | 8.14E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene62955 | 0.861386 | 1.06E-63 | -1.69E-46 |
| MS.gene054343 | MS.gene63050 | 0.803347 | 3.64E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene64048 | 0.813798 | 2.13E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene64394 | -0.845624 | 3.62E-59 | -1.69E-46 |
| MS.gene054343 | MS.gene66921 | -0.835325 | 1.79E-56 | -1.69E-46 |
| MS.gene054343 | MS.gene68595 | 0.830726 | 2.50E-55 | -1.69E-46 |
| MS.gene054343 | MS.gene68597 | 0.803519 | 3.35E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene69450 | 0.803772 | 2.97E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene70306 | 0.820136 | 8.05E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene70601 | 0.806019 | 1.01E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene71379 | -0.824223 | 9.07E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene71896 | -0.810899 | 9.16E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene72279 | -0.810895 | 9.18E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene72416 | 0.877983 | 4.06E-69 | -1.69E-46 |
| MS.gene054343 | MS.gene73544 | 0.82413 | 9.54E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene73545 | 0.803096 | 4.10E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene74575 | 0.840326 | 9.30E-58 | -1.69E-46 |
| MS.gene054343 | MS.gene75088 | 0.803669 | 3.12E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene76418 | 0.820125 | 8.09E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene76419 | 0.881529 | 2.23E-70 | -1.69E-46 |
| MS.gene054343 | MS.gene76521 | 0.844769 | 6.16E-59 | -1.69E-46 |
| MS.gene054343 | MS.gene77025 | 0.818217 | 2.20E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene77727 | 0.805283 | 1.44E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene78428 | -0.810028 | 1.41E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene78942 | 0.843357 | 1.47E-58 | -1.69E-46 |
| MS.gene054343 | MS.gene79744 | 0.839832 | 1.25E-57 | -1.69E-46 |
| MS.gene054343 | MS.gene81275 | 0.83492 | 2.27E-56 | -1.69E-46 |
| MS.gene054343 | MS.gene81747 | 0.812083 | 5.07E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene81952 | 0.804957 | 1.68E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene81981 | -0.813658 | 2.29E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene82253 | 0.823861 | 1.10E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene82778 | -0.819401 | 1.18E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene83095 | 0.821293 | 4.36E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene84198 | -0.806137 | 9.52E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene85136 | 0.840379 | 9.01E-58 | -1.69E-46 |
| MS.gene054343 | MS.gene86099 | 0.801935 | 7.12E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene87466 | 0.851615 | 7.91E-61 | -1.69E-46 |
| MS.gene054343 | MS.gene87467 | 0.876854 | 1.00E-68 | -1.69E-46 |
| MS.gene054343 | MS.gene88896 | 0.802336 | 5.89E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene88958 | 0.866398 | 2.94E-65 | -1.69E-46 |
| MS.gene054343 | MS.gene90793 | 0.838958 | 2.11E-57 | -1.69E-46 |
| MS.gene054343 | MS.gene90819 | -0.800611 | 1.33E-48 | -1.69E-46 |
| MS.gene054343 | MS.gene91401 | 0.84001 | 1.12E-57 | -1.69E-46 |
| MS.gene054343 | MS.gene93105 | -0.812406 | 4.31E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene94623 | 0.814536 | 1.47E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene94807 | 0.820045 | 8.44E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene95041 | 0.81392 | 2.00E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene95302 | 0.903828 | 2.32E-79 | -1.69E-46 |
| MS.gene054343 | MS.gene95877 | -0.8174 | 3.36E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene96549 | 0.807566 | 4.75E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene97437 | -0.843002 | 1.83E-58 | -1.69E-46 |
| MS.gene054343 | MS.gene97726 | 0.825222 | 5.27E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene98678 | 0.841768 | 3.89E-58 | -1.69E-46 |
| MS.gene054343 | MS.gene98949 | 0.835434 | 1.68E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054343.t1 | MTR_6g042040 | 89.552 | 402 | 42 | 0 | 1 | 402 | 3 | 404 | 0.0 | 762 |
| MS.gene054343.t1 | MTR_6g042090 | 80.153 | 393 | 76 | 1 | 10 | 402 | 3 | 393 | 0.0 | 654 |
| MS.gene054343.t1 | MTR_6g042090 | 79.644 | 393 | 74 | 2 | 10 | 402 | 3 | 389 | 0.0 | 648 |
| MS.gene054343.t1 | MTR_6g042090 | 80.473 | 338 | 60 | 2 | 10 | 347 | 3 | 334 | 0.0 | 562 |
| MS.gene054343.t1 | MTR_3g082720 | 59.551 | 445 | 136 | 3 | 2 | 402 | 35 | 479 | 0.0 | 535 |
| MS.gene054343.t1 | MTR_3g082740 | 76.842 | 285 | 64 | 1 | 118 | 402 | 3 | 285 | 2.33e-160 | 461 |
| MS.gene054343.t1 | MTR_6g042030 | 90.698 | 215 | 10 | 1 | 401 | 615 | 50 | 254 | 2.90e-131 | 385 |
| MS.gene054343.t1 | MTR_2g078540 | 51.724 | 203 | 90 | 3 | 420 | 615 | 70 | 271 | 1.56e-58 | 197 |
| MS.gene054343.t1 | MTR_3g082725 | 67.521 | 117 | 38 | 0 | 2 | 118 | 24 | 140 | 2.56e-50 | 171 |
| MS.gene054343.t1 | MTR_6g042050 | 64.062 | 64 | 23 | 0 | 339 | 402 | 9 | 72 | 8.61e-19 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054343.t1 | AT3G15110 | 49.749 | 199 | 87 | 3 | 420 | 613 | 76 | 266 | 2.99e-54 | 186 |
| MS.gene054343.t1 | AT4G25330 | 34.426 | 183 | 110 | 3 | 21 | 201 | 37 | 211 | 5.72e-30 | 118 |
Find 102 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGTTTGTTGCTTTATTC+TGG | 0.170230 | 6.1:-23607158 | MS.gene054343:CDS |
| GCACAAGAATCTTGCATTTA+TGG | 0.191071 | 6.1:-23611792 | MS.gene054343:CDS |
| TATAAGCTTACCTCAAATTT+AGG | 0.201922 | 6.1:+23612249 | None:intergenic |
| CAATAGCACAAAAGGACTTA+TGG | 0.264744 | 6.1:-23608387 | MS.gene054343:CDS |
| GCAGACAACTTCCCCTCATT+TGG | 0.286286 | 6.1:+23613778 | None:intergenic |
| CACTACAGAACGGTAATAAA+TGG | 0.292850 | 6.1:-23607221 | MS.gene054343:intron |
| ATAAACTCGTTCACGGTGTT+AGG | 0.300277 | 6.1:-23616585 | MS.gene054343:CDS |
| AGAAATTATCTGAAATTGTT+TGG | 0.312877 | 6.1:+23608237 | None:intergenic |
| TTGGGTTCCTCTTCTCTTGA+AGG | 0.324829 | 6.1:-23613442 | MS.gene054343:intron |
| ACCTTATGGTGATTGTTATC+TGG | 0.328009 | 6.1:+23607330 | None:intergenic |
| TTGGCCCTTGTAACCATGAT+AGG | 0.335096 | 6.1:+23613797 | None:intergenic |
| GTGTATGGAATAAACTCTTT+TGG | 0.353719 | 6.1:-23607176 | MS.gene054343:CDS |
| AACAATTTCAGATAATTTCT+CGG | 0.364342 | 6.1:-23608234 | MS.gene054343:intron |
| TTTGATCCTGCGCTGGATAG+TGG | 0.365094 | 6.1:+23609395 | None:intergenic |
| TTGTAACCATGATAGGTTAA+AGG | 0.369183 | 6.1:+23613804 | None:intergenic |
| CTTCGTTCTTGCAGATTTCA+AGG | 0.374441 | 6.1:-23613696 | MS.gene054343:CDS |
| GCTCCTAACAATGCTTTATC+TGG | 0.378868 | 6.1:+23608329 | None:intergenic |
| GCTATTTGTGTGATTCTCAT+TGG | 0.379692 | 6.1:+23607043 | None:intergenic |
| TCACCAGATAAAGCATTGTT+AGG | 0.382378 | 6.1:-23608332 | MS.gene054343:CDS |
| TCCTGAGCTTTAACAGAAAC+TGG | 0.383830 | 6.1:+23616619 | None:intergenic |
| ACTAGATGACCCTTTCTCAT+AGG | 0.384636 | 6.1:+23607118 | None:intergenic |
| TTGCTCAGTGTGCGACATAA+TGG | 0.391180 | 6.1:+23612673 | None:intergenic |
| AATAGCACAAAAGGACTTAT+GGG | 0.391794 | 6.1:-23608386 | MS.gene054343:CDS |
| TGTGTACCTTTAACCTATCA+TGG | 0.396707 | 6.1:-23613810 | MS.gene054343:CDS |
| GCTGGAACGTGCTCTCTTAT+CGG | 0.411356 | 6.1:+23613724 | None:intergenic |
| AGCATTGTTAGGAGCAGTTA+TGG | 0.422251 | 6.1:-23608321 | MS.gene054343:CDS |
| ATCGAACTCTAGACAAGAAA+TGG | 0.424800 | 6.1:-23613662 | MS.gene054343:CDS |
| CGCGCCAAACGAACTGTGTT+GGG | 0.426315 | 6.1:-23613460 | MS.gene054343:CDS |
| TAAACTAACCACTGCAAAAG+TGG | 0.428450 | 6.1:-23609514 | MS.gene054343:CDS |
| GGAACCCAACACAGTTCGTT+TGG | 0.437375 | 6.1:+23613456 | None:intergenic |
| GCCAGTTTCTGTTAAAGCTC+AGG | 0.442715 | 6.1:-23616620 | MS.gene054343:CDS |
| TCCATCGTTATTTGATTCGT+TGG | 0.447668 | 6.1:-23616674 | MS.gene054343:CDS |
| AAGTTGTCTGCAGCAGGAAT+TGG | 0.452158 | 6.1:-23613766 | MS.gene054343:CDS |
| ATGGTGGTGCACTGCAACAA+AGG | 0.453948 | 6.1:-23613643 | MS.gene054343:CDS |
| TACATCATCACATCCTCAAC+TGG | 0.456076 | 6.1:-23612611 | MS.gene054343:CDS |
| GGACAACACTGATAGTTACT+TGG | 0.456972 | 6.1:+23609448 | None:intergenic |
| TGCAAGAACGAAGCCATAGC+TGG | 0.458171 | 6.1:+23613706 | None:intergenic |
| AACATTGTTTCCTAAATTTG+AGG | 0.464497 | 6.1:-23612259 | MS.gene054343:intron |
| TCATCATTCAATAGCACAAA+AGG | 0.464553 | 6.1:-23608395 | MS.gene054343:CDS |
| CATGGTTACGCTGCAAGAAA+AGG | 0.467785 | 6.1:-23616752 | MS.gene054343:CDS |
| AAACTCATTTCTTTCTTCGT+CGG | 0.469859 | 6.1:+23616847 | None:intergenic |
| GAAAGCTGAAAGCAAAATCA+TGG | 0.475000 | 6.1:-23607090 | MS.gene054343:CDS |
| TAAACTCGTTCACGGTGTTA+GGG | 0.478878 | 6.1:-23616584 | MS.gene054343:CDS |
| GCACTCAACACCTATGAGAA+AGG | 0.482727 | 6.1:-23607128 | MS.gene054343:CDS |
| GAGGGGAAGTTGTCTGCAGC+AGG | 0.483641 | 6.1:-23613772 | MS.gene054343:CDS |
| GATCAAAAGAGCAAAACAAT+TGG | 0.495344 | 6.1:-23609379 | MS.gene054343:intron |
| TTTAACCTATCATGGTTACA+AGG | 0.504812 | 6.1:-23613802 | MS.gene054343:CDS |
| CTATGATGCTGTTGTTGACA+CGG | 0.509007 | 6.1:-23616521 | MS.gene054343:intron |
| ACGCGCCAAACGAACTGTGT+TGG | 0.512705 | 6.1:-23613461 | MS.gene054343:CDS |
| ATGAGTTTGAGAAACGATTC+CGG | 0.517489 | 6.1:-23616642 | MS.gene054343:CDS |
| AAGAGAGCACGTTCCAGCTA+TGG | 0.521675 | 6.1:-23613719 | MS.gene054343:CDS |
| AATTTGAAGATTGTACATTC+AGG | 0.523181 | 6.1:-23611887 | MS.gene054343:CDS |
| CACTCAACACCTATGAGAAA+GGG | 0.529960 | 6.1:-23607127 | MS.gene054343:CDS |
| TTGTTAGGAGCAGTTATGGC+TGG | 0.532963 | 6.1:-23608317 | MS.gene054343:CDS |
| TTTCAGAATACACCACAAGA+AGG | 0.535144 | 6.1:-23611929 | MS.gene054343:intron |
| TATATCTCGAACGATAAACT+TGG | 0.540677 | 6.1:+23612707 | None:intergenic |
| AAACAAATCTCTCTTAGCAC+TGG | 0.548228 | 6.1:+23611844 | None:intergenic |
| AAAACTACGAAGACGACGCT+TGG | 0.548527 | 6.1:-23616783 | MS.gene054343:CDS |
| TTGATCCTGCGCTGGATAGT+GGG | 0.548692 | 6.1:+23609396 | None:intergenic |
| GTGCGACATAATGGCACCCC+TGG | 0.549699 | 6.1:+23612682 | None:intergenic |
| GTGGTTAGTTTATTTAGCAA+CGG | 0.549937 | 6.1:+23609525 | None:intergenic |
| TACCTAGCTACATTTGTGTA+TGG | 0.551091 | 6.1:-23607191 | MS.gene054343:CDS |
| CGACGCTTGGTACGCCGTCA+TGG | 0.551163 | 6.1:-23616770 | MS.gene054343:CDS |
| GCCAGATAACAATCACCATA+AGG | 0.551485 | 6.1:-23607331 | MS.gene054343:intron |
| AACAATGCTTTATCTGGTGA+AGG | 0.551642 | 6.1:+23608335 | None:intergenic |
| AAACAAACCTTCAAGAGAAG+AGG | 0.553243 | 6.1:+23613435 | None:intergenic |
| CAAGAATCTTGCATTTATGG+AGG | 0.556909 | 6.1:-23611789 | MS.gene054343:CDS |
| ATTATGCTTATGTTCGTGAT+CGG | 0.559754 | 6.1:+23616822 | None:intergenic |
| GAGTGTCATAAACTCGTTCA+CGG | 0.567136 | 6.1:-23616592 | MS.gene054343:CDS |
| ACGATGGAGGGAACAAATTG+TGG | 0.567317 | 6.1:+23616689 | None:intergenic |
| TGGTTACAAGGGCCAAATGA+GGG | 0.570506 | 6.1:-23613790 | MS.gene054343:CDS |
| AATGCTTTATCTGGTGAAGG+TGG | 0.571857 | 6.1:+23608338 | None:intergenic |
| ATGGTAGATAAAGAGTTGGA+AGG | 0.572343 | 6.1:-23612845 | MS.gene054343:CDS |
| AAGCATGGTAGATAAAGAGT+TGG | 0.574853 | 6.1:-23612849 | MS.gene054343:CDS |
| CATAGGTGTTGAGTGCAAGT+TGG | 0.575800 | 6.1:+23607135 | None:intergenic |
| ATGGTTACAAGGGCCAAATG+AGG | 0.577502 | 6.1:-23613791 | MS.gene054343:CDS |
| TATGAGAAAGGGTCATCTAG+TGG | 0.577710 | 6.1:-23607116 | MS.gene054343:CDS |
| TTCTTGCAGCGTAACCATGA+CGG | 0.580581 | 6.1:+23616756 | None:intergenic |
| TATCTACCATGCTTTCGTCA+TGG | 0.581288 | 6.1:+23612858 | None:intergenic |
| TCATCACATCCTCAACTGGC+AGG | 0.589807 | 6.1:-23612607 | MS.gene054343:intron |
| GAGCTTTAACAGAAACTGGC+CGG | 0.589993 | 6.1:+23616623 | None:intergenic |
| TTCCATACACAAATGTAGCT+AGG | 0.589997 | 6.1:+23607189 | None:intergenic |
| TCTTTCCCACTATCCAGCGC+AGG | 0.592749 | 6.1:-23609401 | MS.gene054343:CDS |
| CAACAGCATCATAGAAGCGA+AGG | 0.598451 | 6.1:+23616530 | None:intergenic |
| AAGAATCTTGCATTTATGGA+GGG | 0.599632 | 6.1:-23611788 | MS.gene054343:CDS |
| AACGAATCAAATAACGATGG+AGG | 0.601575 | 6.1:+23616676 | None:intergenic |
| ACTATGCTACCTGCCAGTTG+AGG | 0.603115 | 6.1:+23612598 | None:intergenic |
| GAACAATACAGCAATAGCTA+CGG | 0.610277 | 6.1:+23609422 | None:intergenic |
| TATCGTTCGAGATATATACC+AGG | 0.616639 | 6.1:-23612700 | MS.gene054343:CDS |
| ACGAATCAAATAACGATGGA+GGG | 0.619232 | 6.1:+23616677 | None:intergenic |
| ATCGTTCGAGATATATACCA+GGG | 0.623955 | 6.1:-23612699 | MS.gene054343:CDS |
| ATTAGAGTTGAAGCGTATCG+AGG | 0.630345 | 6.1:+23616555 | None:intergenic |
| ATTATGTCCATCAACAGCTG+TGG | 0.635549 | 6.1:-23612777 | MS.gene054343:CDS |
| GGTTACAAGGGCCAAATGAG+GGG | 0.637467 | 6.1:-23613789 | MS.gene054343:CDS |
| TCCAACGAATCAAATAACGA+TGG | 0.649245 | 6.1:+23616673 | None:intergenic |
| TTAACCTATCATGGTTACAA+GGG | 0.650299 | 6.1:-23613801 | MS.gene054343:CDS |
| AGTCTGCCATGACGAAAGCA+TGG | 0.650629 | 6.1:-23612864 | MS.gene054343:CDS |
| CGTTCTTGCAGATTTCAAGG+AGG | 0.666880 | 6.1:-23613693 | MS.gene054343:CDS |
| AATTTGCTGATCAACAAGAG+CGG | 0.687858 | 6.1:-23611817 | MS.gene054343:CDS |
| GAACTCTAGACAAGAAATGG+TGG | 0.692389 | 6.1:-23613659 | MS.gene054343:CDS |
| TCGTTCGAGATATATACCAG+GGG | 0.702281 | 6.1:-23612698 | MS.gene054343:CDS |
| ATACAGCAATAGCTACGGAG+AGG | 0.739717 | 6.1:+23609427 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 23607004 | 23616872 | 23607004 | ID=MS.gene054343 |
| chr6.1 | mRNA | 23607004 | 23616872 | 23607004 | ID=MS.gene054343.t1;Parent=MS.gene054343 |
| chr6.1 | exon | 23616522 | 23616872 | 23616522 | ID=MS.gene054343.t1.exon1;Parent=MS.gene054343.t1 |
| chr6.1 | CDS | 23616522 | 23616872 | 23616522 | ID=cds.MS.gene054343.t1;Parent=MS.gene054343.t1 |
| chr6.1 | exon | 23613591 | 23613875 | 23613591 | ID=MS.gene054343.t1.exon2;Parent=MS.gene054343.t1 |
| chr6.1 | CDS | 23613591 | 23613875 | 23613591 | ID=cds.MS.gene054343.t1;Parent=MS.gene054343.t1 |
| chr6.1 | exon | 23613443 | 23613491 | 23613443 | ID=MS.gene054343.t1.exon3;Parent=MS.gene054343.t1 |
| chr6.1 | CDS | 23613443 | 23613491 | 23613443 | ID=cds.MS.gene054343.t1;Parent=MS.gene054343.t1 |
| chr6.1 | exon | 23612608 | 23612884 | 23612608 | ID=MS.gene054343.t1.exon4;Parent=MS.gene054343.t1 |
| chr6.1 | CDS | 23612608 | 23612884 | 23612608 | ID=cds.MS.gene054343.t1;Parent=MS.gene054343.t1 |
| chr6.1 | exon | 23612260 | 23612338 | 23612260 | ID=MS.gene054343.t1.exon5;Parent=MS.gene054343.t1 |
| chr6.1 | CDS | 23612260 | 23612338 | 23612260 | ID=cds.MS.gene054343.t1;Parent=MS.gene054343.t1 |
| chr6.1 | exon | 23611786 | 23611945 | 23611786 | ID=MS.gene054343.t1.exon6;Parent=MS.gene054343.t1 |
| chr6.1 | CDS | 23611786 | 23611945 | 23611786 | ID=cds.MS.gene054343.t1;Parent=MS.gene054343.t1 |
| chr6.1 | exon | 23609380 | 23609558 | 23609380 | ID=MS.gene054343.t1.exon7;Parent=MS.gene054343.t1 |
| chr6.1 | CDS | 23609380 | 23609558 | 23609380 | ID=cds.MS.gene054343.t1;Parent=MS.gene054343.t1 |
| chr6.1 | exon | 23608235 | 23608444 | 23608235 | ID=MS.gene054343.t1.exon8;Parent=MS.gene054343.t1 |
| chr6.1 | CDS | 23608235 | 23608444 | 23608235 | ID=cds.MS.gene054343.t1;Parent=MS.gene054343.t1 |
| chr6.1 | exon | 23607332 | 23607357 | 23607332 | ID=MS.gene054343.t1.exon9;Parent=MS.gene054343.t1 |
| chr6.1 | CDS | 23607332 | 23607357 | 23607332 | ID=cds.MS.gene054343.t1;Parent=MS.gene054343.t1 |
| chr6.1 | exon | 23607004 | 23607235 | 23607004 | ID=MS.gene054343.t1.exon10;Parent=MS.gene054343.t1 |
| chr6.1 | CDS | 23607004 | 23607235 | 23607004 | ID=cds.MS.gene054343.t1;Parent=MS.gene054343.t1 |
| Gene Sequence |
| Protein sequence |
