Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78886.t1 | XP_003628043.1 | 40.6 | 345 | 19 | 2 | 2 | 160 | 98 | 442 | 6.60E-51 | 210.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78886.t1 | Q9FH97 | 41.9 | 93 | 49 | 3 | 59 | 151 | 289 | 376 | 3.1e-09 | 63.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78886.t1 | Q1S5L5 | 40.6 | 345 | 19 | 2 | 2 | 160 | 98 | 442 | 4.7e-51 | 210.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050020 | MS.gene78886 | 0.833696 | 4.60E-56 | -1.69E-46 |
| MS.gene050807 | MS.gene78886 | 0.828381 | 9.28E-55 | -1.69E-46 |
| MS.gene050808 | MS.gene78886 | 0.8041 | 2.54E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene78886 | 0.805192 | 1.50E-49 | -1.69E-46 |
| MS.gene060480 | MS.gene78886 | 0.802513 | 5.41E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78886.t1 | MTR_8g041770 | 57.692 | 156 | 19 | 1 | 52 | 160 | 287 | 442 | 1.50e-48 | 162 |
| MS.gene78886.t1 | MTR_8g041770 | 89.474 | 57 | 6 | 0 | 2 | 58 | 98 | 154 | 1.84e-29 | 112 |
| MS.gene78886.t1 | MTR_4g094825 | 38.272 | 243 | 55 | 4 | 1 | 159 | 160 | 391 | 4.15e-46 | 155 |
| MS.gene78886.t1 | MTR_4g022760 | 64.078 | 103 | 35 | 1 | 60 | 160 | 296 | 398 | 3.49e-42 | 144 |
| MS.gene78886.t1 | MTR_4g022760 | 65.517 | 58 | 20 | 0 | 1 | 58 | 88 | 145 | 4.38e-18 | 80.1 |
| MS.gene78886.t1 | MTR_0190s0020 | 50.331 | 151 | 28 | 1 | 56 | 159 | 292 | 442 | 5.67e-39 | 137 |
| MS.gene78886.t1 | MTR_0190s0020 | 68.966 | 58 | 18 | 0 | 1 | 58 | 97 | 154 | 3.70e-21 | 89.0 |
| MS.gene78886.t1 | MTR_4g022800 | 44.516 | 155 | 39 | 1 | 53 | 160 | 289 | 443 | 8.66e-36 | 129 |
| MS.gene78886.t1 | MTR_4g022800 | 63.793 | 58 | 21 | 0 | 1 | 58 | 88 | 145 | 6.42e-17 | 77.0 |
| MS.gene78886.t1 | MTR_4g022825 | 45.890 | 146 | 33 | 1 | 60 | 159 | 295 | 440 | 2.25e-35 | 127 |
| MS.gene78886.t1 | MTR_4g022825 | 66.667 | 57 | 19 | 0 | 2 | 58 | 89 | 145 | 1.26e-19 | 84.7 |
| MS.gene78886.t1 | MTR_4g022670 | 42.581 | 155 | 43 | 1 | 52 | 160 | 288 | 442 | 2.49e-35 | 127 |
| MS.gene78886.t1 | MTR_4g022670 | 69.091 | 55 | 17 | 0 | 1 | 55 | 88 | 142 | 1.68e-17 | 78.6 |
| MS.gene78886.t1 | MTR_7g026860 | 46.000 | 150 | 38 | 2 | 54 | 160 | 290 | 439 | 3.30e-35 | 127 |
| MS.gene78886.t1 | MTR_7g026860 | 63.793 | 58 | 21 | 0 | 1 | 58 | 88 | 145 | 1.58e-17 | 78.6 |
| MS.gene78886.t1 | MTR_4g022720 | 43.871 | 155 | 41 | 2 | 52 | 160 | 282 | 436 | 8.39e-35 | 126 |
| MS.gene78886.t1 | MTR_4g022720 | 67.241 | 58 | 19 | 0 | 1 | 58 | 88 | 145 | 3.94e-19 | 83.2 |
| MS.gene78886.t1 | MTR_3g026310 | 39.216 | 153 | 45 | 1 | 56 | 160 | 297 | 449 | 1.96e-30 | 114 |
| MS.gene78886.t1 | MTR_3g026310 | 70.175 | 57 | 17 | 0 | 2 | 58 | 89 | 145 | 1.37e-21 | 90.1 |
| MS.gene78886.t1 | MTR_8g040780 | 40.268 | 149 | 39 | 1 | 56 | 154 | 79 | 227 | 2.11e-29 | 108 |
| MS.gene78886.t1 | MTR_3g088420 | 41.497 | 147 | 40 | 1 | 60 | 160 | 288 | 434 | 2.47e-29 | 111 |
| MS.gene78886.t1 | MTR_3g088420 | 75.439 | 57 | 14 | 0 | 2 | 58 | 89 | 145 | 8.17e-22 | 90.9 |
| MS.gene78886.t1 | MTR_4g094835 | 39.333 | 150 | 42 | 2 | 54 | 155 | 294 | 442 | 2.19e-26 | 103 |
| MS.gene78886.t1 | MTR_4g094835 | 65.517 | 58 | 20 | 0 | 1 | 58 | 100 | 157 | 4.58e-21 | 88.6 |
| MS.gene78886.t1 | MTR_4g094832 | 40.278 | 144 | 37 | 2 | 60 | 155 | 284 | 426 | 3.69e-26 | 102 |
| MS.gene78886.t1 | MTR_4g094832 | 67.241 | 58 | 19 | 0 | 1 | 58 | 84 | 141 | 1.58e-21 | 90.1 |
| MS.gene78886.t1 | MTR_4g094842 | 37.931 | 145 | 43 | 2 | 60 | 157 | 302 | 446 | 1.27e-24 | 98.6 |
| MS.gene78886.t1 | MTR_4g094842 | 74.138 | 58 | 15 | 0 | 1 | 58 | 102 | 159 | 5.44e-23 | 94.0 |
| MS.gene78886.t1 | MTR_4g094838 | 38.889 | 144 | 39 | 2 | 60 | 155 | 286 | 428 | 1.52e-24 | 98.2 |
| MS.gene78886.t1 | MTR_4g094838 | 65.517 | 58 | 20 | 0 | 1 | 58 | 102 | 159 | 2.86e-20 | 86.7 |
| MS.gene78886.t1 | MTR_7g026780 | 50.575 | 87 | 21 | 1 | 96 | 160 | 26 | 112 | 2.84e-22 | 86.3 |
| MS.gene78886.t1 | MTR_8g040760 | 71.930 | 57 | 16 | 0 | 2 | 58 | 95 | 151 | 3.92e-22 | 88.6 |
| MS.gene78886.t1 | MTR_6g034495 | 68.421 | 57 | 18 | 0 | 2 | 58 | 71 | 127 | 1.96e-21 | 85.5 |
| MS.gene78886.t1 | MTR_6g016815 | 70.175 | 57 | 17 | 0 | 2 | 58 | 103 | 159 | 4.66e-21 | 88.2 |
| MS.gene78886.t1 | MTR_8g079710 | 36.620 | 142 | 39 | 3 | 60 | 150 | 295 | 436 | 2.28e-19 | 84.0 |
| MS.gene78886.t1 | MTR_8g079710 | 65.517 | 58 | 20 | 0 | 1 | 58 | 93 | 150 | 4.85e-19 | 83.2 |
| MS.gene78886.t1 | MTR_7g026850 | 63.793 | 58 | 21 | 0 | 1 | 58 | 71 | 128 | 8.25e-19 | 79.0 |
| MS.gene78886.t1 | MTR_7g026870 | 57.377 | 61 | 26 | 0 | 55 | 115 | 91 | 151 | 1.24e-18 | 77.8 |
| MS.gene78886.t1 | MTR_4g022290 | 63.793 | 58 | 21 | 0 | 1 | 58 | 94 | 151 | 4.06e-18 | 80.5 |
| MS.gene78886.t1 | MTR_4g022290 | 32.727 | 165 | 59 | 6 | 42 | 156 | 280 | 442 | 7.75e-15 | 71.2 |
| MS.gene78886.t1 | MTR_7g026830 | 60.345 | 58 | 23 | 0 | 1 | 58 | 20 | 77 | 1.93e-17 | 73.2 |
| MS.gene78886.t1 | MTR_4g094828 | 34.667 | 150 | 47 | 5 | 60 | 159 | 302 | 450 | 1.07e-16 | 76.3 |
| MS.gene78886.t1 | MTR_4g094828 | 56.897 | 58 | 25 | 0 | 1 | 58 | 93 | 150 | 1.28e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78886.t1 | AT5G67160 | 34.815 | 135 | 76 | 5 | 17 | 151 | 254 | 376 | 1.06e-11 | 62.0 |
Find 25 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTAATGATCCTGAGTTTA+TGG | 0.261735 | 8.3:+56252415 | MS.gene78886:CDS |
| CCATTGAAAGAGGATTATTT+TGG | 0.285934 | 8.3:+56252016 | MS.gene78886:CDS |
| AGGTGTAGAAGAAGGTAGTA+TGG | 0.364829 | 8.3:+56252352 | MS.gene78886:intron |
| AATTGCCTCAAAAGTTTCAT+AGG | 0.367209 | 8.3:-56252393 | None:intergenic |
| CCAAAATAATCCTCTTTCAA+TGG | 0.374799 | 8.3:-56252016 | None:intergenic |
| TCAATGGAGGAATCAACCTT+TGG | 0.403212 | 8.3:-56252000 | None:intergenic |
| ACACTAGAAGCAACATTAGT+TGG | 0.409033 | 8.3:-56252447 | None:intergenic |
| TGGACTTGGTAAAGGTGCTT+TGG | 0.409489 | 8.3:+56252096 | MS.gene78886:CDS |
| GTTGATTCCTCCATTGAAAG+AGG | 0.477667 | 8.3:+56252006 | MS.gene78886:CDS |
| GTGTTTAAAGGTGTAGAAGA+AGG | 0.498123 | 8.3:+56252344 | MS.gene78886:intron |
| ACCAGTGTCGATGACATCCT+TGG | 0.503399 | 8.3:+56251439 | MS.gene78886:CDS |
| CAAGACAATGGACTTGGTAA+AGG | 0.507284 | 8.3:+56252088 | MS.gene78886:CDS |
| GGTTATAGGCGTTAGACCAA+AGG | 0.529274 | 8.3:+56251984 | MS.gene78886:intron |
| GTTACTTGGACAGCAAGTAA+TGG | 0.529511 | 8.3:-56251538 | None:intergenic |
| TCCGTTGTTAGCATGAAAGT+TGG | 0.545219 | 8.3:+56252055 | MS.gene78886:CDS |
| TAGGATGATATGTGGCTCCA+AGG | 0.569745 | 8.3:-56251456 | None:intergenic |
| TCCAAGGATGTCATCGACAC+TGG | 0.591435 | 8.3:-56251440 | None:intergenic |
| AAATAATCCTCTTTCAATGG+AGG | 0.592205 | 8.3:-56252013 | None:intergenic |
| TTGTTGCAAGACAATGGACT+TGG | 0.601437 | 8.3:+56252082 | MS.gene78886:CDS |
| TCCATCATGTGCAACAATGC+GGG | 0.603295 | 8.3:+56251385 | None:intergenic |
| ATACCAAGAGTAATAAAACT+AGG | 0.607573 | 8.3:-56252190 | None:intergenic |
| GGTGATTTGTTGCAAGACAA+TGG | 0.609643 | 8.3:+56252076 | MS.gene78886:CDS |
| GACACAACATCCATAAACTC+AGG | 0.636566 | 8.3:-56252425 | None:intergenic |
| ACCAACTTTCATGCTAACAA+CGG | 0.674514 | 8.3:-56252056 | None:intergenic |
| TTCCATCATGTGCAACAATG+CGG | 0.685385 | 8.3:+56251384 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTGTTTGTGTGTTTAA+AGG | + | chr8.3:56252332-56252351 | MS.gene78886:intron | 20.0% |
| !! | TACAATAGTAAAACATTAGT+GGG | + | chr8.3:56252214-56252233 | MS.gene78886:intron | 20.0% |
| !!! | AATGTTTATGGTAATGATTT+TGG | + | chr8.3:56252256-56252275 | MS.gene78886:intron | 20.0% |
| !!! | TTAGAATGATGATTATTTTG+TGG | - | chr8.3:56251757-56251776 | None:intergenic | 20.0% |
| ! | ATACCAAGAGTAATAAAACT+AGG | - | chr8.3:56252193-56252212 | None:intergenic | 25.0% |
| ! | ATTACCATAAACATTAAACC+AGG | - | chr8.3:56252251-56252270 | None:intergenic | 25.0% |
| ! | ATTGTGAAAGGAAATTGAAT+CGG | - | chr8.3:56251730-56251749 | None:intergenic | 25.0% |
| ! | GTACAATAGTAAAACATTAG+TGG | + | chr8.3:56252213-56252232 | MS.gene78886:intron | 25.0% |
| ! | TTACCATAAACATTAAACCA+GGG | - | chr8.3:56252250-56252269 | None:intergenic | 25.0% |
| !! | AAAAATGAGTGCAGAATTTT+AGG | - | chr8.3:56251478-56251497 | None:intergenic | 25.0% |
| !!! | CACTCATTTTTTCCATTTAA+CGG | + | chr8.3:56251487-56251506 | MS.gene78886:CDS | 25.0% |
| !!! | TTATGGTAATGATTTTGGTT+GGG | + | chr8.3:56252261-56252280 | MS.gene78886:intron | 25.0% |
| !!! | TTTATGGTAATGATTTTGGT+TGG | + | chr8.3:56252260-56252279 | MS.gene78886:intron | 25.0% |
| AAAAACTCAACCTAAATGAG+AGG | + | chr8.3:56251797-56251816 | MS.gene78886:intron | 30.0% | |
| AAATAATCCTCTTTCAATGG+AGG | - | chr8.3:56252016-56252035 | None:intergenic | 30.0% | |
| AAATTCCATCATTTGAACGT+TGG | + | chr8.3:56251683-56251702 | MS.gene78886:intron | 30.0% | |
| AATGAAACATCCTCTCATTT+AGG | - | chr8.3:56251810-56251829 | None:intergenic | 30.0% | |
| AATTGCCTCAAAAGTTTCAT+AGG | - | chr8.3:56252396-56252415 | None:intergenic | 30.0% | |
| CAAGTAACAGAACTACTTAA+TGG | + | chr8.3:56251553-56251572 | MS.gene78886:intron | 30.0% | |
| CCAAAATAATCCTCTTTCAA+TGG | - | chr8.3:56252019-56252038 | None:intergenic | 30.0% | |
| GGGAGTGAAAATAATGAAAA+TGG | + | chr8.3:56252307-56252326 | MS.gene78886:intron | 30.0% | |
| TGAAAAATGACTATGAGAGT+TGG | + | chr8.3:56252158-56252177 | MS.gene78886:CDS | 30.0% | |
| TTGGCATTTCATCAATTCAT+GGG | + | chr8.3:56251627-56251646 | MS.gene78886:intron | 30.0% | |
| TTTGGCATTTCATCAATTCA+TGG | + | chr8.3:56251626-56251645 | MS.gene78886:intron | 30.0% | |
| ! | CATTAAGTAGTTCTGTTACT+TGG | - | chr8.3:56251555-56251574 | None:intergenic | 30.0% |
| ! | CCATTGAAAGAGGATTATTT+TGG | + | chr8.3:56252016-56252035 | MS.gene78886:CDS | 30.0% |
| ! | TAGTTTTTCACTCCGTTAAA+TGG | - | chr8.3:56251502-56251521 | None:intergenic | 30.0% |
| ! | TTTGTCCTATGAAACTTTTG+AGG | + | chr8.3:56252388-56252407 | MS.gene78886:CDS | 30.0% |
| !! | AAGACAACCATTTGAGTTTT+TGG | - | chr8.3:56251653-56251672 | None:intergenic | 30.0% |
| !! | ACGTTCAAATGATGGAATTT+TGG | - | chr8.3:56251683-56251702 | None:intergenic | 30.0% |
| !! | TTTTGTGGTTCTATTGTGAA+AGG | - | chr8.3:56251742-56251761 | None:intergenic | 30.0% |
| !!! | ACACCTAGTTTTATTACTCT+TGG | + | chr8.3:56252187-56252206 | MS.gene78886:CDS | 30.0% |
| !!! | CAGAATTTTAGGATGATATG+TGG | - | chr8.3:56251467-56251486 | None:intergenic | 30.0% |
| !!! | TATGAAACTTTTGAGGCAAT+TGG | + | chr8.3:56252395-56252414 | MS.gene78886:CDS | 30.0% |
| !!! | TATGGTAATGATTTTGGTTG+GGG | + | chr8.3:56252262-56252281 | MS.gene78886:intron | 30.0% |
| ACCAACTTTCATGCTAACAA+CGG | - | chr8.3:56252059-56252078 | None:intergenic | 35.0% | |
| TCACCCTGGTTTAATGTTTA+TGG | + | chr8.3:56252244-56252263 | MS.gene78886:intron | 35.0% | |
| ! | AAGCACTTTTCACTCACATT+TGG | + | chr8.3:56251905-56251924 | MS.gene78886:intron | 35.0% |
| ! | GTGTTTAAAGGTGTAGAAGA+AGG | + | chr8.3:56252344-56252363 | MS.gene78886:intron | 35.0% |
| ! | TGGTAATGATCCTGAGTTTA+TGG | + | chr8.3:56252415-56252434 | MS.gene78886:CDS | 35.0% |
| AACGGAGTGAAAAACTACGA+AGG | + | chr8.3:56251505-56251524 | MS.gene78886:CDS | 40.0% | |
| ACATAATGCACTTCTTCTCG+AGG | - | chr8.3:56251961-56251980 | None:intergenic | 40.0% | |
| ACGGAGTGAAAAACTACGAA+GGG | + | chr8.3:56251506-56251525 | MS.gene78886:CDS | 40.0% | |
| AGGTGTAGAAGAAGGTAGTA+TGG | + | chr8.3:56252352-56252371 | MS.gene78886:intron | 40.0% | |
| CATAATGCACTTCTTCTCGA+GGG | - | chr8.3:56251960-56251979 | None:intergenic | 40.0% | |
| CTTTGTACCAGCTTCTAAGT+TGG | - | chr8.3:56251869-56251888 | None:intergenic | 40.0% | |
| GACACAACATCCATAAACTC+AGG | - | chr8.3:56252428-56252447 | None:intergenic | 40.0% | |
| GGAAACCAACGTTCAAATGA+TGG | - | chr8.3:56251691-56251710 | None:intergenic | 40.0% | |
| GTGAAAGGAAATTGAATCGG+AGG | - | chr8.3:56251727-56251746 | None:intergenic | 40.0% | |
| GTGCATTATGTGGTGGTTAT+AGG | + | chr8.3:56251970-56251989 | MS.gene78886:intron | 40.0% | |
| GTTACTTGGACAGCAAGTAA+TGG | - | chr8.3:56251541-56251560 | None:intergenic | 40.0% | |
| TCAATGGAGGAATCAACCTT+TGG | - | chr8.3:56252003-56252022 | None:intergenic | 40.0% | |
| TCATGGGCCAAAAACTCAAA+TGG | + | chr8.3:56251643-56251662 | MS.gene78886:intron | 40.0% | |
| TCCGTTGTTAGCATGAAAGT+TGG | + | chr8.3:56252055-56252074 | MS.gene78886:CDS | 40.0% | |
| TTCAAAGCCAACTTAGAAGC+TGG | + | chr8.3:56251859-56251878 | MS.gene78886:intron | 40.0% | |
| ! | AGAAGAAGTGCATTATGTGG+TGG | + | chr8.3:56251963-56251982 | MS.gene78886:intron | 40.0% |
| ! | CAAGACAATGGACTTGGTAA+AGG | + | chr8.3:56252088-56252107 | MS.gene78886:CDS | 40.0% |
| ! | GTTGATTCCTCCATTGAAAG+AGG | + | chr8.3:56252006-56252025 | MS.gene78886:CDS | 40.0% |
| ! | TCGAGAAGAAGTGCATTATG+TGG | + | chr8.3:56251960-56251979 | MS.gene78886:intron | 40.0% |
| ! | TTGTTGCAAGACAATGGACT+TGG | + | chr8.3:56252082-56252101 | MS.gene78886:CDS | 40.0% |
| !! | GGTGATTTGTTGCAAGACAA+TGG | + | chr8.3:56252076-56252095 | MS.gene78886:CDS | 40.0% |
| !! | TTTGAACGTTGGTTTCCAGA+TGG | + | chr8.3:56251694-56251713 | MS.gene78886:intron | 40.0% |
| ATCGGAGGTTGAATACCATC+TGG | - | chr8.3:56251712-56251731 | None:intergenic | 45.0% | |
| GGTTATAGGCGTTAGACCAA+AGG | + | chr8.3:56251984-56252003 | MS.gene78886:intron | 45.0% | |
| GTTAATCATGTGGTCGCTGA+TGG | + | chr8.3:56251595-56251614 | MS.gene78886:intron | 45.0% | |
| TAGGATGATATGTGGCTCCA+AGG | - | chr8.3:56251459-56251478 | None:intergenic | 45.0% | |
| TGCGTGCACAGTTAATCATG+TGG | + | chr8.3:56251585-56251604 | MS.gene78886:intron | 45.0% | |
| TTTGGTTGGGGAAAACCTGT+GGG | + | chr8.3:56252274-56252293 | MS.gene78886:intron | 45.0% | |
| ! | TTCTCGAGGGTCAAGGTTTT+TGG | - | chr8.3:56251947-56251966 | None:intergenic | 45.0% |
| !! | TGGACTTGGTAAAGGTGCTT+TGG | + | chr8.3:56252096-56252115 | MS.gene78886:CDS | 45.0% |
| !! | TTTTGGTTGGGGAAAACCTG+TGG | + | chr8.3:56252273-56252292 | MS.gene78886:intron | 45.0% |
| TCCAAGGATGTCATCGACAC+TGG | - | chr8.3:56251443-56251462 | None:intergenic | 50.0% | |
| TTGGTTGGGGAAAACCTGTG+GGG | + | chr8.3:56252275-56252294 | MS.gene78886:intron | 50.0% | |
| ! | TAGTGGGTAGTAGTTCACCC+TGG | + | chr8.3:56252230-56252249 | MS.gene78886:intron | 50.0% |
| ! | TCGCTGATGGCACATCGATT+TGG | + | chr8.3:56251608-56251627 | MS.gene78886:intron | 50.0% |
| !! | ACCAGTGTCGATGACATCCT+TGG | + | chr8.3:56251439-56251458 | MS.gene78886:CDS | 50.0% |
| AAACCTGTGGGGGTTCGAAC+TGG | + | chr8.3:56252286-56252305 | MS.gene78886:intron | 55.0% | |
| AACCTGTGGGGGTTCGAACT+GGG | + | chr8.3:56252287-56252306 | MS.gene78886:intron | 55.0% | |
| GCACTTCTTCTCGAGGGTCA+AGG | - | chr8.3:56251954-56251973 | None:intergenic | 55.0% | |
| TGGTTGGGGAAAACCTGTGG+GGG | + | chr8.3:56252276-56252295 | MS.gene78886:intron | 55.0% | |
| CTCCCAGTTCGAACCCCCAC+AGG | - | chr8.3:56252292-56252311 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 56251391 | 56252454 | 56251391 | ID=MS.gene78886 |
| chr8.3 | mRNA | 56251391 | 56252454 | 56251391 | ID=MS.gene78886.t1;Parent=MS.gene78886 |
| chr8.3 | exon | 56251391 | 56251555 | 56251391 | ID=MS.gene78886.t1.exon1;Parent=MS.gene78886.t1 |
| chr8.3 | CDS | 56251391 | 56251555 | 56251391 | ID=cds.MS.gene78886.t1;Parent=MS.gene78886.t1 |
| chr8.3 | exon | 56251992 | 56252208 | 56251992 | ID=MS.gene78886.t1.exon2;Parent=MS.gene78886.t1 |
| chr8.3 | CDS | 56251992 | 56252208 | 56251992 | ID=cds.MS.gene78886.t1;Parent=MS.gene78886.t1 |
| chr8.3 | exon | 56252354 | 56252454 | 56252354 | ID=MS.gene78886.t1.exon3;Parent=MS.gene78886.t1 |
| chr8.3 | CDS | 56252354 | 56252454 | 56252354 | ID=cds.MS.gene78886.t1;Parent=MS.gene78886.t1 |
| Gene Sequence |
| Protein sequence |
