AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78958

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78958.t1 MTR_5g029100 97.994 349 7 0 1 349 1 349 0.0 721
MS.gene78958.t1 MTR_5g029100 97.473 277 7 0 73 349 42 318 0.0 575
MS.gene78958.t1 MTR_8g090100 63.333 300 101 5 26 322 5 298 8.78e-137 392
MS.gene78958.t1 MTR_1g033420 56.782 317 130 4 17 332 9 319 1.47e-128 371
MS.gene78958.t1 MTR_8g064180 44.444 306 143 5 22 305 10 310 7.84e-85 259
MS.gene78958.t1 MTR_4g057450 40.074 272 148 5 37 305 45 304 3.75e-66 211
MS.gene78958.t1 MTR_8g013055 39.700 267 150 5 40 305 29 285 5.20e-65 207
MS.gene78958.t1 MTR_1g063020 37.748 302 163 5 17 305 5 294 2.40e-63 204
MS.gene78958.t1 MTR_7g102260 36.577 298 163 6 23 306 7 292 4.56e-61 197
MS.gene78958.t1 MTR_7g084750 35.417 288 169 6 25 305 10 287 4.86e-61 197
MS.gene78958.t1 MTR_2g095800 36.667 300 167 5 18 305 21 309 5.46e-61 198
MS.gene78958.t1 MTR_7g084770 36.271 295 170 6 20 306 4 288 7.13e-60 194
MS.gene78958.t1 MTR_7g084760 35.932 295 171 6 20 306 4 288 1.92e-59 193
MS.gene78958.t1 MTR_4g097700 38.768 276 157 6 32 305 59 324 3.72e-59 194
MS.gene78958.t1 MTR_1g105495 36.304 303 175 7 19 311 6 300 7.07e-59 192
MS.gene78958.t1 MTR_4g097640 38.328 287 163 7 21 305 13 287 1.42e-58 191
MS.gene78958.t1 MTR_4g097670 38.328 287 163 7 21 305 13 287 1.42e-58 191
MS.gene78958.t1 MTR_6g033085 35.986 289 168 6 24 305 9 287 3.68e-57 187
MS.gene78958.t1 MTR_6g033055 35.640 289 169 6 24 305 9 287 2.97e-56 185
MS.gene78958.t1 MTR_4g045853 36.789 299 168 9 14 305 4 288 9.32e-56 184
MS.gene78958.t1 MTR_2g089140 37.450 251 147 5 60 305 41 286 2.63e-54 180
MS.gene78958.t1 MTR_1g105900 33.779 299 181 8 15 307 6 293 6.13e-52 174
MS.gene78958.t1 MTR_5g091730 36.897 290 161 8 19 305 8 278 6.65e-52 174
MS.gene78958.t1 MTR_3g089540 37.218 266 152 6 42 305 30 282 8.37e-52 174
MS.gene78958.t1 MTR_4g126920 36.264 273 161 7 38 307 21 283 1.95e-50 170
MS.gene78958.t1 MTR_4g128400 34.354 294 171 7 15 305 9 283 5.60e-49 166
MS.gene78958.t1 MTR_2g049130 32.609 276 171 6 19 292 6 268 3.07e-48 164
MS.gene78958.t1 MTR_7g056090 33.096 281 175 6 14 294 6 273 7.16e-48 163
MS.gene78958.t1 MTR_2g089140 37.168 226 132 5 85 305 3 223 2.35e-47 160
MS.gene78958.t1 MTR_4g128410 34.247 292 177 8 19 307 3 282 1.40e-46 160
MS.gene78958.t1 MTR_7g093530 35.115 262 156 7 50 308 32 282 2.39e-46 159
MS.gene78958.t1 MTR_6g088320 35.739 291 172 9 20 305 3 283 2.80e-46 159
MS.gene78958.t1 MTR_3g084630 34.586 266 156 6 42 305 28 277 2.84e-46 159
MS.gene78958.t1 MTR_3g084620 32.982 285 173 6 23 305 9 277 2.93e-46 159
MS.gene78958.t1 MTR_2g038860 33.099 284 182 5 24 305 9 286 1.16e-45 157
MS.gene78958.t1 MTR_2g038705 33.099 284 182 5 24 305 9 286 1.16e-45 157
MS.gene78958.t1 MTR_4g128570 33.099 284 164 7 24 305 13 272 1.81e-45 157
MS.gene78958.t1 MTR_2g049030 30.717 293 183 8 19 309 6 280 1.88e-45 157
MS.gene78958.t1 MTR_4g128580 34.328 268 164 7 42 305 26 285 3.82e-45 156
MS.gene78958.t1 MTR_8g081040 33.564 289 172 8 22 306 10 282 1.12e-44 155
MS.gene78958.t1 MTR_8g102220 34.586 266 136 8 57 318 41 272 2.09e-41 146
MS.gene78958.t1 MTR_8g102910 35.081 248 151 7 61 305 39 279 9.86e-41 144
MS.gene78958.t1 MTR_4g128590 29.963 267 164 5 42 306 31 276 2.62e-40 143
MS.gene78958.t1 MTR_8g032640 33.523 176 109 4 62 237 31 198 2.37e-17 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78958.t1 AT1G32170 70.347 317 91 2 12 327 1 315 1.18e-166 468
MS.gene78958.t1 AT4G18990 65.781 301 94 1 36 327 34 334 4.78e-149 424
MS.gene78958.t1 AT1G14720 52.108 332 152 2 17 345 3 330 1.11e-126 367
MS.gene78958.t1 AT2G01850 55.418 323 136 3 27 345 13 331 1.79e-126 366
MS.gene78958.t1 AT4G18990 64.655 232 73 1 107 329 31 262 1.28e-112 329
MS.gene78958.t1 AT1G10550 43.273 275 149 3 37 306 38 310 7.47e-83 254
MS.gene78958.t1 AT4G13090 40.816 294 164 5 14 305 3 288 9.91e-75 233
MS.gene78958.t1 AT4G13080 37.288 295 166 6 18 305 9 291 7.69e-68 215
MS.gene78958.t1 AT3G25050 41.573 267 145 6 40 305 33 289 2.37e-66 211
MS.gene78958.t1 AT3G44990 40.074 272 148 4 37 305 34 293 5.56e-63 202
MS.gene78958.t1 AT2G06850 36.177 293 168 6 22 305 8 290 6.98e-63 202
MS.gene78958.t1 AT5G65730 38.112 286 165 6 22 305 15 290 1.29e-62 202
MS.gene78958.t1 AT5G13870 36.567 268 158 5 40 305 30 287 2.04e-62 201
MS.gene78958.t1 AT5G13870 36.567 268 158 5 40 305 30 287 2.04e-62 201
MS.gene78958.t1 AT5G13870 36.567 268 158 5 40 305 30 287 2.04e-62 201
MS.gene78958.t1 AT2G36870 37.500 304 160 6 18 305 8 297 2.16e-62 201
MS.gene78958.t1 AT4G37800 38.722 266 153 5 42 306 34 290 5.53e-60 195
MS.gene78958.t1 AT1G11545 36.054 294 175 6 23 309 16 303 3.54e-59 193
MS.gene78958.t1 AT2G06850 38.983 236 132 5 72 305 5 230 1.58e-56 184
MS.gene78958.t1 AT4G03210 37.751 249 147 4 59 306 44 285 1.87e-54 181
MS.gene78958.t1 AT3G23730 36.268 284 168 7 25 305 13 286 7.46e-54 179
MS.gene78958.t1 AT5G57550 36.486 296 161 9 20 305 4 282 1.00e-52 176
MS.gene78958.t1 AT4G28850 37.546 269 143 10 45 306 38 288 7.87e-51 171
MS.gene78958.t1 AT4G14130 35.739 291 171 8 18 305 7 284 1.11e-50 171
MS.gene78958.t1 AT4G03210 37.607 234 138 4 74 306 31 257 3.91e-50 168
MS.gene78958.t1 AT4G25810 36.434 258 154 6 50 305 34 283 2.59e-49 167
MS.gene78958.t1 AT4G30270 32.867 286 166 6 22 305 4 265 3.66e-49 166
MS.gene78958.t1 AT5G57560 34.146 287 176 7 21 305 6 281 2.02e-48 164
MS.gene78958.t1 AT4G30290 34.028 288 173 7 22 306 4 277 3.07e-48 164
MS.gene78958.t1 AT2G14620 32.765 293 181 7 19 307 16 296 3.98e-48 164
MS.gene78958.t1 AT5G57540 33.696 276 155 6 42 307 26 283 4.79e-48 164
MS.gene78958.t1 AT5G48070 32.292 288 178 7 22 306 9 282 7.49e-48 163
MS.gene78958.t1 AT5G57530 33.452 281 159 6 37 307 22 284 1.43e-47 162
MS.gene78958.t1 AT4G30280 33.681 288 174 7 22 306 9 282 1.78e-46 159
MS.gene78958.t1 AT2G18800 35.036 274 163 6 42 305 28 296 3.05e-46 159
MS.gene78958.t1 AT2G14620 33.891 239 144 6 73 307 18 246 4.28e-43 150
MS.gene78958.t1 AT4G25820 32.841 271 164 6 42 307 30 287 5.60e-43 150
MS.gene78958.t1 AT1G65310 34.749 259 152 7 50 305 37 281 1.45e-42 149
MS.gene78958.t1 AT1G65310 34.749 259 152 7 50 305 59 303 2.60e-42 149
MS.gene78958.t1 AT2G14620 34.361 227 135 6 85 307 19 235 1.23e-41 145
MS.gene78958.t1 AT3G48580 33.878 245 133 9 64 305 55 273 2.65e-35 130
MS.gene78958.t1 AT2G36870 38.728 173 90 3 18 176 8 178 2.16e-33 122
MS.gene78958.t1 AT3G48580 33.755 237 128 9 72 305 4 214 3.28e-33 123
MS.gene78958.t1 AT3G48580 29.388 245 124 10 64 305 55 253 1.02e-21 93.2

Find 100 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTAACACCTCCCTAAT+TGG 0.193516 5.3:-18153784 None:intergenic
TGAAAATAGGAAATGAGTTT+TGG 0.219960 5.3:-18150921 None:intergenic
TGTCATTGTATGCTACTATA+TGG 0.235057 5.3:+18153842 MS.gene78958:CDS
ACATTGATGAAGTTCCAATT+AGG 0.258577 5.3:+18153770 MS.gene78958:CDS
CTTATTGCTATGATACAATT+AGG 0.266532 5.3:+18154106 MS.gene78958:CDS
ACCATAGATATAGCATTCTT+TGG 0.278186 5.3:+18151930 MS.gene78958:CDS
GAGACCGGAAGGTTGAAATT+TGG 0.287257 5.3:+18154186 MS.gene78958:CDS
CTATATGGGATGCATCAAAT+TGG 0.293138 5.3:+18153857 MS.gene78958:CDS
TCCTCCAAATTTCAACCTTC+CGG 0.294246 5.3:-18154190 None:intergenic
TTACACTCTGGTGGTGGTAT+AGG 0.295113 5.3:-18154132 None:intergenic
GAGCTTCAAGATGGACGTTT+TGG 0.327938 5.3:-18154011 None:intergenic
GTGAGGAACGTTATCGTCTT+TGG 0.339457 5.3:+18151888 MS.gene78958:CDS
CAAACAAACTTGTATGGAAA+TGG 0.345202 5.3:+18151848 MS.gene78958:CDS
CATTGATGAAGTTCCAATTA+GGG 0.352975 5.3:+18153771 MS.gene78958:CDS
CGCATTGCGAGGCGGCGCAT+GGG 0.354309 5.3:-18154054 None:intergenic
TACACTCTGGTGGTGGTATA+GGG 0.364239 5.3:-18154131 None:intergenic
TCCAAAGAATGCTATATCTA+TGG 0.367030 5.3:-18151931 None:intergenic
TCGCATTGCGAGGCGGCGCA+TGG 0.371340 5.3:-18154055 None:intergenic
GAAGCCACCGCCGACATTCT+AGG 0.376340 5.3:+18154211 MS.gene78958:CDS
GGGTCGGATACTTCTTGAAT+TGG 0.394064 5.3:-18153973 None:intergenic
CGGTTTCAAACAAACTTGTA+TGG 0.402069 5.3:+18151842 MS.gene78958:CDS
CTGAGCAACCCTTGAGGACT+AGG 0.407962 5.3:-18153945 None:intergenic
GGTGTTAAGAAATGAGGAAA+TGG 0.409302 5.3:+18153795 MS.gene78958:CDS
TACAATGACATTGGTTTGAC+TGG 0.422070 5.3:-18153829 None:intergenic
TTAAATCTTTGTTTCTCCGC+TGG 0.456783 5.3:-18154162 None:intergenic
GATGGTTATTCTCATCTCTT+CGG 0.463358 5.3:+18151013 MS.gene78958:CDS
ATCATACCTTACGTTGTTGT+GGG 0.467592 5.3:+18150891 MS.gene78958:CDS
GCATTGCGAGGCGGCGCATG+GGG 0.468919 5.3:-18154053 None:intergenic
AACGTTGTTCGTTCCTCCGA+TGG 0.474311 5.3:+18151043 MS.gene78958:CDS
TTGTTATTACAGACATCAAA+CGG 0.482919 5.3:+18151749 MS.gene78958:intron
TCCTTAAATTCAACAACAAA+AGG 0.483638 5.3:-18153922 None:intergenic
TATATGGGATGCATCAAATT+GGG 0.487126 5.3:+18153858 MS.gene78958:CDS
GCATCAAATTGGGCAACATC+GGG 0.487694 5.3:+18153868 MS.gene78958:CDS
GCAACCATACCCTTCAATGA+TGG 0.489672 5.3:+18150995 MS.gene78958:CDS
GAGTTCCTAGGTAACATAGC+TGG 0.490058 5.3:+18151809 MS.gene78958:CDS
CTTTGGTTCGACCCAACAAA+AGG 0.491716 5.3:+18151905 MS.gene78958:CDS
ATGAGAATAACCATCATTGA+AGG 0.494626 5.3:-18151005 None:intergenic
CCTTGATCGGTGTCATCTAC+CGG 0.499492 5.3:-18154255 None:intergenic
GTGTTAAGAAATGAGGAAAT+GGG 0.502222 5.3:+18153796 MS.gene78958:CDS
TGCATCAAATTGGGCAACAT+CGG 0.504906 5.3:+18153867 MS.gene78958:CDS
CATCATACCTTACGTTGTTG+TGG 0.506997 5.3:+18150890 MS.gene78958:CDS
CATAGTCTTGAGCTTCAAGA+TGG 0.507045 5.3:-18154020 None:intergenic
AAACAAAGATTTAAAGAGAC+CGG 0.507356 5.3:+18154171 MS.gene78958:CDS
CCCGCCTAGAATGTCGGCGG+TGG 0.511235 5.3:-18154215 None:intergenic
ACCGGAAGGTTGAAATTTGG+AGG 0.511495 5.3:+18154189 MS.gene78958:CDS
GTTCGTTCCTCCGATGGCAA+CGG 0.511531 5.3:+18151049 MS.gene78958:CDS
TATTCTCATCTCTTCGGAGA+TGG 0.518704 5.3:+18151019 MS.gene78958:CDS
TTACCGTCGAATTATACTGC+TGG 0.532109 5.3:+18151278 MS.gene78958:CDS
GTCATTGTATGCTACTATAT+GGG 0.532342 5.3:+18153843 MS.gene78958:CDS
GGCGGAACCTTCGCATTGCG+AGG 0.537482 5.3:-18154065 None:intergenic
CCACCGCCGACATTCTAGGC+GGG 0.539580 5.3:+18154215 MS.gene78958:CDS
ATAACCATCATTGAAGGGTA+TGG 0.540096 5.3:-18150999 None:intergenic
TGAGAAAACCCACGATGAGT+TGG 0.541286 5.3:+18151781 MS.gene78958:CDS
ATTTAAGGACCTAGTCCTCA+AGG 0.541774 5.3:+18153936 MS.gene78958:CDS
TGTAACGATCGAGGAGGAGT+TGG 0.545650 5.3:-18151075 None:intergenic
TAGGGAGGTGTTAAGAAATG+AGG 0.547128 5.3:+18153789 MS.gene78958:CDS
TCATCACATATCACCTTGAT+CGG 0.551054 5.3:-18154268 None:intergenic
CTCCTCCTCGATCGTTACAC+CGG 0.556457 5.3:+18151079 MS.gene78958:CDS
CCGGTAGATGACACCGATCA+AGG 0.556925 5.3:+18154255 MS.gene78958:CDS
TGCGCCGCCTCGCAATGCGA+AGG 0.560204 5.3:+18154058 MS.gene78958:CDS
CATTGAAGGGTATGGTTGCA+AGG 0.562725 5.3:-18150991 None:intergenic
GTCGGAGCAAACGTCGGGGT+CGG 0.563948 5.3:-18153989 None:intergenic
CTCAAAATCCAACTCATCGT+GGG 0.567228 5.3:-18151789 None:intergenic
TCAAATTGGGCAACATCGGG+TGG 0.571083 5.3:+18153871 MS.gene78958:CDS
GAGTTGGACACCGTTGCCAT+CGG 0.573412 5.3:-18151059 None:intergenic
GGGTGGTCGTACTTCAACTC+CGG 0.575069 5.3:+18154236 MS.gene78958:CDS
CACCGCCGACATTCTAGGCG+GGG 0.578126 5.3:+18154216 MS.gene78958:CDS
ATAGTAGCATACAATGACAT+TGG 0.578293 5.3:-18153838 None:intergenic
ACAATGACATTGGTTTGACT+GGG 0.593671 5.3:-18153828 None:intergenic
TATGTTCCCACAACAACGTA+AGG 0.595015 5.3:-18150897 None:intergenic
ATAATATTACACTCTGGTGG+TGG 0.597029 5.3:-18154138 None:intergenic
GGAACCTTCGCATTGCGAGG+CGG 0.602262 5.3:-18154062 None:intergenic
AAGTTTGTTTGAAACCGCCA+TGG 0.604401 5.3:-18151836 None:intergenic
GACCACCCCGCCTAGAATGT+CGG 0.605547 5.3:-18154221 None:intergenic
CATTGCGAGGCGGCGCATGG+GGG 0.608687 5.3:-18154052 None:intergenic
AAAGATTTAAAGAGACCGGA+AGG 0.620074 5.3:+18154175 MS.gene78958:CDS
TTTAAGGACCTAGTCCTCAA+GGG 0.620357 5.3:+18153937 MS.gene78958:CDS
TTGGACACCGTTGCCATCGG+AGG 0.624400 5.3:-18151056 None:intergenic
AATTACCGGTGTAACGATCG+AGG 0.634816 5.3:-18151084 None:intergenic
TCATCAAATATGTATCAACA+TGG 0.635106 5.3:+18151233 MS.gene78958:CDS
ACTCAAAATCCAACTCATCG+TGG 0.636628 5.3:-18151790 None:intergenic
AAGAGTAGTACATGAAACGT+TGG 0.637745 5.3:-18154086 None:intergenic
TGAGAATAACCATCATTGAA+GGG 0.639194 5.3:-18151004 None:intergenic
CGCCGACATTCTAGGCGGGG+TGG 0.642323 5.3:+18154219 MS.gene78958:CDS
AGTAGTACATGAAACGTTGG+CGG 0.642577 5.3:-18154083 None:intergenic
GGAATAATATTACACTCTGG+TGG 0.643905 5.3:-18154141 None:intergenic
TGATGAAGTTCCAATTAGGG+AGG 0.646761 5.3:+18153774 MS.gene78958:CDS
GCTGGAATAATATTACACTC+TGG 0.647855 5.3:-18154144 None:intergenic
ATTCCAGCAGTATAATTCGA+CGG 0.648872 5.3:-18151281 None:intergenic
GTAACATAGCTGGAAAACCA+TGG 0.654662 5.3:+18151819 MS.gene78958:CDS
AAGTACTCATCGTGGACGTG+AGG 0.662015 5.3:+18151871 MS.gene78958:CDS
GATCAACTGAGCAACCCTTG+AGG 0.676059 5.3:-18153951 None:intergenic
AGAGTGTAATATTATTCCAG+CGG 0.676164 5.3:+18154146 MS.gene78958:CDS
CACCCCGCCTAGAATGTCGG+CGG 0.677092 5.3:-18154218 None:intergenic
GCCACCGCCGACATTCTAGG+CGG 0.701881 5.3:+18154214 MS.gene78958:CDS
TTTGGTCGGAGCAAACGTCG+GGG 0.702480 5.3:-18153993 None:intergenic
GGAAATGGAAGTACTCATCG+TGG 0.703472 5.3:+18151863 MS.gene78958:CDS
TTAAGAAATGAGGAAATGGG+AGG 0.717535 5.3:+18153799 MS.gene78958:CDS
TACCGGTGTAACGATCGAGG+AGG 0.746595 5.3:-18151081 None:intergenic
ACATAGCTGGAAAACCATGG+CGG 0.793154 5.3:+18151822 MS.gene78958:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATTTAATAATTTAATTAC+CGG - chr5.3:18151101-18151120 None:intergenic 10.0%
!!! TATATAAATATTTTTTGTGT+TGG + chr5.3:18151599-18151618 MS.gene78958:intron 10.0%
!!! TTAATATTTTATCATTTATG+TGG + chr5.3:18151425-18151444 MS.gene78958:intron 10.0%
!!! TTGAAGTTTATTTTTTATAT+CGG - chr5.3:18152530-18152549 None:intergenic 10.0%
!! ACACTTCATATATTAATTTA+TGG - chr5.3:18153498-18153517 None:intergenic 15.0%
!! ATAATTAGCCATTATTAATA+TGG + chr5.3:18153150-18153169 MS.gene78958:intron 15.0%
!! ATAGAGAAAAAAATGAAAAT+AGG - chr5.3:18150937-18150956 None:intergenic 15.0%
!! GAATGTTAGTATAAAATTAT+AGG + chr5.3:18152568-18152587 MS.gene78958:intron 15.0%
!! TATCATCTTATACTTTAAAT+TGG + chr5.3:18152115-18152134 MS.gene78958:intron 15.0%
!! TTAAATCAATCATATTGAAT+CGG + chr5.3:18152370-18152389 MS.gene78958:intron 15.0%
!! TTTAAAAGGTAATTTGATTA+TGG - chr5.3:18152270-18152289 None:intergenic 15.0%
!!! AGTATTATCCTTATTTTAAT+AGG - chr5.3:18153234-18153253 None:intergenic 15.0%
!!! TTAATTTTTTATATAGGTTC+TGG + chr5.3:18151203-18151222 MS.gene78958:intron 15.0%
!!! TTATTTTTCTCATTTTAGAA+AGG + chr5.3:18152923-18152942 MS.gene78958:intron 15.0%
!!! TTCTAAAATGAGAAAAATAA+TGG - chr5.3:18152923-18152942 None:intergenic 15.0%
!!! TTTTTTCTTCATTTTCTTTA+TGG + chr5.3:18153033-18153052 MS.gene78958:intron 15.0%
!! AAAAAAGGATCAATTATGAA+AGG - chr5.3:18151389-18151408 None:intergenic 20.0%
!! ATAGCTATGAACAAAATATA+AGG - chr5.3:18153696-18153715 None:intergenic 20.0%
!! ATATTTCATTTGTGTGTTTA+TGG + chr5.3:18152008-18152027 MS.gene78958:intron 20.0%
!! GACAATTAATATTCTACTAT+TGG - chr5.3:18152073-18152092 None:intergenic 20.0%
!! GTAAGATATATGAAATGAAA+CGG + chr5.3:18151682-18151701 MS.gene78958:intron 20.0%
!!! AATTATGTTTTGTTTCTTGA+AGG + chr5.3:18151146-18151165 MS.gene78958:intron 20.0%
!!! CAATCTTTTTGTAACAAAAA+AGG - chr5.3:18151404-18151423 None:intergenic 20.0%
!!! CCATAGTTTTTATTACTAAA+GGG + chr5.3:18152857-18152876 MS.gene78958:intron 20.0%
!!! TTAGAAAGGTATAATTAATC+TGG + chr5.3:18152937-18152956 MS.gene78958:intron 20.0%
!!! TTTATGGTTACTTCAAATTT+TGG + chr5.3:18152024-18152043 MS.gene78958:intron 20.0%
!!! TTTTATATCGGTTACAATAT+AGG - chr5.3:18152518-18152537 None:intergenic 20.0%
! AAAAAGAGGACAAGTATTAT+AGG - chr5.3:18152603-18152622 None:intergenic 25.0%
! AAACAAAGATTTAAAGAGAC+CGG + chr5.3:18154171-18154190 MS.gene78958:CDS 25.0%
! ACAAGCAAAGTCAATTATTA+CGG + chr5.3:18151512-18151531 MS.gene78958:intron 25.0%
! ATAAGGATAATACTAGATTG+TGG + chr5.3:18153240-18153259 MS.gene78958:intron 25.0%
! CCCTTTAGTAATAAAAACTA+TGG - chr5.3:18152860-18152879 None:intergenic 25.0%
! CTTATTGCTATGATACAATT+AGG + chr5.3:18154106-18154125 MS.gene78958:CDS 25.0%
! GGGAAAGTAAAATAAAAAAG+AGG - chr5.3:18152617-18152636 None:intergenic 25.0%
! GTAAGAAACAAAATTCAAGT+TGG - chr5.3:18152976-18152995 None:intergenic 25.0%
! TAAGGATAATACTAGATTGT+GGG + chr5.3:18153241-18153260 MS.gene78958:intron 25.0%
! TCATCAAATATGTATCAACA+TGG + chr5.3:18151233-18151252 MS.gene78958:CDS 25.0%
! TCCTTAAATTCAACAACAAA+AGG - chr5.3:18153925-18153944 None:intergenic 25.0%
! TGATAATATGACTCTAACTT+AGG - chr5.3:18152329-18152348 None:intergenic 25.0%
! TGATTATGGTAAAATCCAAA+AGG - chr5.3:18152256-18152275 None:intergenic 25.0%
! TGTGAAAGCCTATTAAAATA+AGG + chr5.3:18153223-18153242 MS.gene78958:intron 25.0%
! TTACATTGACAATTAGTTGA+AGG - chr5.3:18152454-18152473 None:intergenic 25.0%
! TTGGATATTAACTAATAACG+TGG + chr5.3:18152707-18152726 MS.gene78958:intron 25.0%
! TTTAATTAGGTGGAACTAAT+GGG - chr5.3:18153619-18153638 None:intergenic 25.0%
!! AATTTTTGCCAACTAGATTT+CGG - chr5.3:18153643-18153662 None:intergenic 25.0%
!! AGTTAAACTTTCCTTTTACT+TGG + chr5.3:18151471-18151490 MS.gene78958:intron 25.0%
!! CTTGCATTTGTTAGTTTAAA+AGG - chr5.3:18152284-18152303 None:intergenic 25.0%
!! GAAAATAGGAAATGAGTTTT+GGG - chr5.3:18150923-18150942 None:intergenic 25.0%
!! GCCATAGTTTTTATTACTAA+AGG + chr5.3:18152856-18152875 MS.gene78958:intron 25.0%
!! TGAAAATAGGAAATGAGTTT+TGG - chr5.3:18150924-18150943 None:intergenic 25.0%
!! TTACCTCAAAGTTTTCAAAA+AGG + chr5.3:18151559-18151578 MS.gene78958:intron 25.0%
!! TTGTTATTACAGACATCAAA+CGG + chr5.3:18151749-18151768 MS.gene78958:intron 25.0%
!!! AAACTATGAATTCTAGAGTT+TGG - chr5.3:18153184-18153203 None:intergenic 25.0%
!!! AAACTTTGAGGTAAACAAAT+TGG - chr5.3:18151553-18151572 None:intergenic 25.0%
!!! TCCTTTTGTTGTTGAATTTA+AGG + chr5.3:18153921-18153940 MS.gene78958:CDS 25.0%
!!! TTTCCTTTTTGAAAACTTTG+AGG - chr5.3:18151565-18151584 None:intergenic 25.0%
AAAATTCTCCACCAAGTAAA+AGG - chr5.3:18151485-18151504 None:intergenic 30.0%
AACCAATCCATAAACACATA+AGG - chr5.3:18152643-18152662 None:intergenic 30.0%
AAGGATAATACTAGATTGTG+GGG + chr5.3:18153242-18153261 MS.gene78958:intron 30.0%
AAGGCAAATAATCTAAGTTG+TGG - chr5.3:18152199-18152218 None:intergenic 30.0%
AATTAAACCCGAAATCTAGT+TGG + chr5.3:18153632-18153651 MS.gene78958:intron 30.0%
ACATTGATGAAGTTCCAATT+AGG + chr5.3:18153770-18153789 MS.gene78958:CDS 30.0%
ACCATAGATATAGCATTCTT+TGG + chr5.3:18151930-18151949 MS.gene78958:CDS 30.0%
AGAGTGTAATATTATTCCAG+CGG + chr5.3:18154146-18154165 MS.gene78958:CDS 30.0%
ATAGTAGCATACAATGACAT+TGG - chr5.3:18153841-18153860 None:intergenic 30.0%
ATATATTGAGACGCTTACTA+TGG - chr5.3:18152174-18152193 None:intergenic 30.0%
ATCCATAAACACATAAGGAA+AGG - chr5.3:18152638-18152657 None:intergenic 30.0%
ATGAGAATAACCATCATTGA+AGG - chr5.3:18151008-18151027 None:intergenic 30.0%
CAAACAAACTTGTATGGAAA+TGG + chr5.3:18151848-18151867 MS.gene78958:CDS 30.0%
CATGAGGACCATATTAATAA+TGG - chr5.3:18153161-18153180 None:intergenic 30.0%
CATTGATGAAGTTCCAATTA+GGG + chr5.3:18153771-18153790 MS.gene78958:CDS 30.0%
GACCACACAAATTTAGTATT+GGG - chr5.3:18152051-18152070 None:intergenic 30.0%
GTCATTGTATGCTACTATAT+GGG + chr5.3:18153843-18153862 MS.gene78958:CDS 30.0%
GTGTTAAGAAATGAGGAAAT+GGG + chr5.3:18153796-18153815 MS.gene78958:CDS 30.0%
GTTTAATTAGGTGGAACTAA+TGG - chr5.3:18153620-18153639 None:intergenic 30.0%
TACTACATTCATGTCATGTA+AGG + chr5.3:18151984-18152003 MS.gene78958:intron 30.0%
TATATGGGATGCATCAAATT+GGG + chr5.3:18153858-18153877 MS.gene78958:CDS 30.0%
TCCAAAGAATGCTATATCTA+TGG - chr5.3:18151934-18151953 None:intergenic 30.0%
TCCATAAACACATAAGGAAA+GGG - chr5.3:18152637-18152656 None:intergenic 30.0%
TGAGAATAACCATCATTGAA+GGG - chr5.3:18151007-18151026 None:intergenic 30.0%
TGGAAACATATAGAATTCGT+TGG - chr5.3:18152489-18152508 None:intergenic 30.0%
TGTCATTGTATGCTACTATA+TGG + chr5.3:18153842-18153861 MS.gene78958:CDS 30.0%
TTCCTTATGTGTTTATGGAT+TGG + chr5.3:18152638-18152657 MS.gene78958:intron 30.0%
! AATTGACTTTGCTTGTTCTT+TGG - chr5.3:18151508-18151527 None:intergenic 30.0%
! ATCTATGGTATCCTTTTGTT+GGG - chr5.3:18151919-18151938 None:intergenic 30.0%
! ATTTTTGCCAACTAGATTTC+GGG - chr5.3:18153642-18153661 None:intergenic 30.0%
! CTTTATGGTGATGATAATGA+TGG + chr5.3:18153048-18153067 MS.gene78958:intron 30.0%
! TAAACAAAAGCACGTTAGTT+AGG + chr5.3:18153397-18153416 MS.gene78958:intron 30.0%
! TAAACTTTCCTTTTACTTGG+TGG + chr5.3:18151474-18151493 MS.gene78958:intron 30.0%
! TATCTATGGTATCCTTTTGT+TGG - chr5.3:18151920-18151939 None:intergenic 30.0%
! TCACTCAAAAATTAGTCTCA+TGG - chr5.3:18152223-18152242 None:intergenic 30.0%
! TCATGTTTGACTTAATGTGA+GGG + chr5.3:18152752-18152771 MS.gene78958:intron 30.0%
! TTCATGTTTGACTTAATGTG+AGG + chr5.3:18152751-18152770 MS.gene78958:intron 30.0%
! TTTTAATAGGCTTTCACATC+AGG - chr5.3:18153221-18153240 None:intergenic 30.0%
!! ACTAGATTTCGGGTTTAATT+AGG - chr5.3:18153632-18153651 None:intergenic 30.0%
!! CTAACGTGCTTTTGTTTAAT+TGG - chr5.3:18153395-18153414 None:intergenic 30.0%
!! CTAGTTGTGCCAATTTTAAT+TGG - chr5.3:18153442-18153461 None:intergenic 30.0%
!!! ACTAAAGGGATTGTTTTAGA+TGG + chr5.3:18152871-18152890 MS.gene78958:intron 30.0%
!!! TGCCAATTTTAATTGGACTT+TGG - chr5.3:18153435-18153454 None:intergenic 30.0%
!!! TGTGTTGGAAGAGTTTTTTT+GGG + chr5.3:18151614-18151633 MS.gene78958:intron 30.0%
!!! TTGTGTTGGAAGAGTTTTTT+TGG + chr5.3:18151613-18151632 MS.gene78958:intron 30.0%
AAAGATTTAAAGAGACCGGA+AGG + chr5.3:18154175-18154194 MS.gene78958:CDS 35.0%
AAGAGTAGTACATGAAACGT+TGG - chr5.3:18154089-18154108 None:intergenic 35.0%
ATAACCATCATTGAAGGGTA+TGG - chr5.3:18151002-18151021 None:intergenic 35.0%
ATAATATTACACTCTGGTGG+TGG - chr5.3:18154141-18154160 None:intergenic 35.0%
ATCATACCTTACGTTGTTGT+GGG + chr5.3:18150891-18150910 MS.gene78958:CDS 35.0%
ATTCCAGCAGTATAATTCGA+CGG - chr5.3:18151284-18151303 None:intergenic 35.0%
CGGTTTCAAACAAACTTGTA+TGG + chr5.3:18151842-18151861 MS.gene78958:CDS 35.0%
CTATATGGGATGCATCAAAT+TGG + chr5.3:18153857-18153876 MS.gene78958:CDS 35.0%
CTTGTGATTGCAAAAGTTTC+CGG + chr5.3:18152664-18152683 MS.gene78958:intron 35.0%
GACCCAATACTAAATTTGTG+TGG + chr5.3:18152046-18152065 MS.gene78958:intron 35.0%
GATGGTTATTCTCATCTCTT+CGG + chr5.3:18151013-18151032 MS.gene78958:CDS 35.0%
GCTGGAATAATATTACACTC+TGG - chr5.3:18154147-18154166 None:intergenic 35.0%
GGAATAATATTACACTCTGG+TGG - chr5.3:18154144-18154163 None:intergenic 35.0%
GGACCACACAAATTTAGTAT+TGG - chr5.3:18152052-18152071 None:intergenic 35.0%
GGCCAAAGTCCAATTAAAAT+TGG + chr5.3:18153430-18153449 MS.gene78958:intron 35.0%
GGTGTTAAGAAATGAGGAAA+TGG + chr5.3:18153795-18153814 MS.gene78958:CDS 35.0%
GGTTACAATATAGGCTTATG+TGG - chr5.3:18152509-18152528 None:intergenic 35.0%
TATGTGTGTATTTGTGGCTT+TGG + chr5.3:18152688-18152707 MS.gene78958:intron 35.0%
TCCCTTTCCTTATGTGTTTA+TGG + chr5.3:18152633-18152652 MS.gene78958:intron 35.0%
TCTATGAGTTCGCATTTGTT+TGG - chr5.3:18153572-18153591 None:intergenic 35.0%
TTAAGAAATGAGGAAATGGG+AGG + chr5.3:18153799-18153818 MS.gene78958:CDS 35.0%
TTGTGATTGCAAAAGTTTCC+GGG + chr5.3:18152665-18152684 MS.gene78958:intron 35.0%
TTTCTTAACACCTCCCTAAT+TGG - chr5.3:18153787-18153806 None:intergenic 35.0%
! AGATGGTAGTGATGATACTT+TGG + chr5.3:18152888-18152907 MS.gene78958:intron 35.0%
! AGTGACAACTCTATTCCTTT+TGG + chr5.3:18152238-18152257 MS.gene78958:intron 35.0%
! ATGTTTGACTTAATGTGAGG+GGG + chr5.3:18152754-18152773 MS.gene78958:intron 35.0%
! CAAAAATTAGTCTCATGGCA+AGG - chr5.3:18152218-18152237 None:intergenic 35.0%
! CATGTTTGACTTAATGTGAG+GGG + chr5.3:18152753-18152772 MS.gene78958:intron 35.0%
! TTAAATCTTTGTTTCTCCGC+TGG - chr5.3:18154165-18154184 None:intergenic 35.0%
!! ACAATGACATTGGTTTGACT+GGG - chr5.3:18153831-18153850 None:intergenic 35.0%
!! AGATTTCGGGTTTAATTAGG+TGG - chr5.3:18153629-18153648 None:intergenic 35.0%
!! TACAATGACATTGGTTTGAC+TGG - chr5.3:18153832-18153851 None:intergenic 35.0%
ACTCAAAATCCAACTCATCG+TGG - chr5.3:18151793-18151812 None:intergenic 40.0%
AGTAGTACATGAAACGTTGG+CGG - chr5.3:18154086-18154105 None:intergenic 40.0%
ATTTAAGGACCTAGTCCTCA+AGG + chr5.3:18153936-18153955 MS.gene78958:CDS 40.0%
CATCATACCTTACGTTGTTG+TGG + chr5.3:18150890-18150909 MS.gene78958:CDS 40.0%
CGTGGTATGTTATGAGATTG+AGG + chr5.3:18152725-18152744 MS.gene78958:intron 40.0%
CGTTAGTTAGGAGCTTATGT+TGG + chr5.3:18153409-18153428 MS.gene78958:intron 40.0%
CTCAAAATCCAACTCATCGT+GGG - chr5.3:18151792-18151811 None:intergenic 40.0%
GGTATGTTATGAGATTGAGG+TGG + chr5.3:18152728-18152747 MS.gene78958:intron 40.0%
GTAACATAGCTGGAAAACCA+TGG + chr5.3:18151819-18151838 MS.gene78958:CDS 40.0%
TATGTGTGAGCTAACAAGGA+TGG + chr5.3:18152830-18152849 MS.gene78958:intron 40.0%
TATGTTCCCACAACAACGTA+AGG - chr5.3:18150900-18150919 None:intergenic 40.0%
TATTCTCATCTCTTCGGAGA+TGG + chr5.3:18151019-18151038 MS.gene78958:CDS 40.0%
TCCTCCAAATTTCAACCTTC+CGG - chr5.3:18154193-18154212 None:intergenic 40.0%
TGAGTATGTGTGAGCTAACA+AGG + chr5.3:18152826-18152845 MS.gene78958:intron 40.0%
TGATGAAGTTCCAATTAGGG+AGG + chr5.3:18153774-18153793 MS.gene78958:CDS 40.0%
TGCATCAAATTGGGCAACAT+CGG + chr5.3:18153867-18153886 MS.gene78958:CDS 40.0%
TTACCGTCGAATTATACTGC+TGG + chr5.3:18151278-18151297 MS.gene78958:CDS 40.0%
TTTAAGGACCTAGTCCTCAA+GGG + chr5.3:18153937-18153956 MS.gene78958:CDS 40.0%
! AAGTTTGTTTGAAACCGCCA+TGG - chr5.3:18151839-18151858 None:intergenic 40.0%
! CATAGTCTTGAGCTTCAAGA+TGG - chr5.3:18154023-18154042 None:intergenic 40.0%
! GACATGGTTTGGCAAATTGT+AGG - chr5.3:18153597-18153616 None:intergenic 40.0%
! GTTTTCCAGCTATGTTACCT+AGG - chr5.3:18151817-18151836 None:intergenic 40.0%
! TGTTTGACTTAATGTGAGGG+GGG + chr5.3:18152755-18152774 MS.gene78958:intron 40.0%
!! GAAAAGTGTTTCTTGCGTGT+GGG + chr5.3:18152777-18152796 MS.gene78958:intron 40.0%
!! GAATTCTAGAGTTTGGCATG+AGG - chr5.3:18153177-18153196 None:intergenic 40.0%
!! TAGGGAGGTGTTAAGAAATG+AGG + chr5.3:18153789-18153808 MS.gene78958:CDS 40.0%
!! TTCAAGATGGACGTTTTGGT+CGG - chr5.3:18154010-18154029 None:intergenic 40.0%
!!! GAGTTGGATTTTGAGTTCCT+AGG + chr5.3:18151797-18151816 MS.gene78958:CDS 40.0%
AATTACCGGTGTAACGATCG+AGG - chr5.3:18151087-18151106 None:intergenic 45.0%
ACATAGCTGGAAAACCATGG+CGG + chr5.3:18151822-18151841 MS.gene78958:CDS 45.0%
ACCGGAAGGTTGAAATTTGG+AGG + chr5.3:18154189-18154208 MS.gene78958:CDS 45.0%
ATTAATCTGGCCCACACTCA+TGG + chr5.3:18152950-18152969 MS.gene78958:intron 45.0%
GAGACCGGAAGGTTGAAATT+TGG + chr5.3:18154186-18154205 MS.gene78958:CDS 45.0%
GAGTTCCTAGGTAACATAGC+TGG + chr5.3:18151809-18151828 MS.gene78958:CDS 45.0%
GCAACCATACCCTTCAATGA+TGG + chr5.3:18150995-18151014 MS.gene78958:CDS 45.0%
GCATCAAATTGGGCAACATC+GGG + chr5.3:18153868-18153887 MS.gene78958:CDS 45.0%
GCCACAAATACACACATACC+CGG - chr5.3:18152686-18152705 None:intergenic 45.0%
GGAACTAATGGGACATGGTT+TGG - chr5.3:18153608-18153627 None:intergenic 45.0%
GGGTCGGATACTTCTTGAAT+TGG - chr5.3:18153976-18153995 None:intergenic 45.0%
GTGAGGAACGTTATCGTCTT+TGG + chr5.3:18151888-18151907 MS.gene78958:CDS 45.0%
TAGGTGGAACTAATGGGACA+TGG - chr5.3:18153613-18153632 None:intergenic 45.0%
TCCGGGTATGTGTGTATTTG+TGG + chr5.3:18152682-18152701 MS.gene78958:intron 45.0%
TGAGAAAACCCACGATGAGT+TGG + chr5.3:18151781-18151800 MS.gene78958:CDS 45.0%
! CATTGAAGGGTATGGTTGCA+AGG - chr5.3:18150994-18151013 None:intergenic 45.0%
! CTTTGGTTCGACCCAACAAA+AGG + chr5.3:18151905-18151924 MS.gene78958:CDS 45.0%
! GAGCTTCAAGATGGACGTTT+TGG - chr5.3:18154014-18154033 None:intergenic 45.0%
!! ATTCAAGTTGGCCATGAGTG+TGG - chr5.3:18152964-18152983 None:intergenic 45.0%
!! GGAAAAGTGTTTCTTGCGTG+TGG + chr5.3:18152776-18152795 MS.gene78958:intron 45.0%
!! GGAAATGGAAGTACTCATCG+TGG + chr5.3:18151863-18151882 MS.gene78958:CDS 45.0%
!! TACACTCTGGTGGTGGTATA+GGG - chr5.3:18154134-18154153 None:intergenic 45.0%
!! TTACACTCTGGTGGTGGTAT+AGG - chr5.3:18154135-18154154 None:intergenic 45.0%
!! TTCAAGTTGGCCATGAGTGT+GGG - chr5.3:18152963-18152982 None:intergenic 45.0%
!!! AATTGATTAATTTTTTATAT+AGG + chr5.3:18151197-18151216 MS.gene78958:intron 5.0%
!!! ATTTTTTTTTTAGAAAAAAA+AGG + chr5.3:18151645-18151664 MS.gene78958:intron 5.0%
AACGTTGTTCGTTCCTCCGA+TGG + chr5.3:18151043-18151062 MS.gene78958:CDS 50.0%
AAGTACTCATCGTGGACGTG+AGG + chr5.3:18151871-18151890 MS.gene78958:CDS 50.0%
GATCAACTGAGCAACCCTTG+AGG - chr5.3:18153954-18153973 None:intergenic 50.0%
TCAAATTGGGCAACATCGGG+TGG + chr5.3:18153871-18153890 MS.gene78958:CDS 50.0%
TGTAACGATCGAGGAGGAGT+TGG - chr5.3:18151078-18151097 None:intergenic 50.0%
! TTTTGGTCGGAGCAAACGTC+GGG - chr5.3:18153997-18154016 None:intergenic 50.0%
!! CCTTGATCGGTGTCATCTAC+CGG - chr5.3:18154258-18154277 None:intergenic 50.0%
!! GTTTTGGTCGGAGCAAACGT+CGG - chr5.3:18153998-18154017 None:intergenic 50.0%
CCGGTAGATGACACCGATCA+AGG + chr5.3:18154255-18154274 MS.gene78958:CDS 55.0%
CTCCTCCTCGATCGTTACAC+CGG + chr5.3:18151079-18151098 MS.gene78958:CDS 55.0%
CTGAGCAACCCTTGAGGACT+AGG - chr5.3:18153948-18153967 None:intergenic 55.0%
GAGTTGGACACCGTTGCCAT+CGG - chr5.3:18151062-18151081 None:intergenic 55.0%
GGGTGGTCGTACTTCAACTC+CGG + chr5.3:18154236-18154255 MS.gene78958:CDS 55.0%
GTTCGTTCCTCCGATGGCAA+CGG + chr5.3:18151049-18151068 MS.gene78958:CDS 55.0%
TACCGGTGTAACGATCGAGG+AGG - chr5.3:18151084-18151103 None:intergenic 55.0%
TTTGGTCGGAGCAAACGTCG+GGG - chr5.3:18153996-18154015 None:intergenic 55.0%
GAAGCCACCGCCGACATTCT+AGG + chr5.3:18154211-18154230 MS.gene78958:CDS 60.0%
GACCACCCCGCCTAGAATGT+CGG - chr5.3:18154224-18154243 None:intergenic 60.0%
GGAACCTTCGCATTGCGAGG+CGG - chr5.3:18154065-18154084 None:intergenic 60.0%
TTGGACACCGTTGCCATCGG+AGG - chr5.3:18151059-18151078 None:intergenic 60.0%
CACCCCGCCTAGAATGTCGG+CGG - chr5.3:18154221-18154240 None:intergenic 65.0%
CACCGCCGACATTCTAGGCG+GGG + chr5.3:18154216-18154235 MS.gene78958:CDS 65.0%
CCACCGCCGACATTCTAGGC+GGG + chr5.3:18154215-18154234 MS.gene78958:CDS 65.0%
GCCACCGCCGACATTCTAGG+CGG + chr5.3:18154214-18154233 MS.gene78958:CDS 65.0%
GGCGGAACCTTCGCATTGCG+AGG - chr5.3:18154068-18154087 None:intergenic 65.0%
GTCGGAGCAAACGTCGGGGT+CGG - chr5.3:18153992-18154011 None:intergenic 65.0%
CATTGCGAGGCGGCGCATGG+GGG - chr5.3:18154055-18154074 None:intergenic 70.0%
CCCGCCTAGAATGTCGGCGG+TGG - chr5.3:18154218-18154237 None:intergenic 70.0%
CGCATTGCGAGGCGGCGCAT+GGG - chr5.3:18154057-18154076 None:intergenic 70.0%
CGCCGACATTCTAGGCGGGG+TGG + chr5.3:18154219-18154238 MS.gene78958:CDS 70.0%
GCATTGCGAGGCGGCGCATG+GGG - chr5.3:18154056-18154075 None:intergenic 70.0%
GCGGCGCATGGGGGTCACAT+TGG - chr5.3:18154046-18154065 None:intergenic 70.0%
TCGCATTGCGAGGCGGCGCA+TGG - chr5.3:18154058-18154077 None:intergenic 70.0%
TGCGCCGCCTCGCAATGCGA+AGG + chr5.3:18154058-18154077 MS.gene78958:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 18150884 18154287 18150884 ID=MS.gene78958
chr5.3 mRNA 18150884 18154287 18150884 ID=MS.gene78958.t1;Parent=MS.gene78958
chr5.3 exon 18150884 18151100 18150884 ID=MS.gene78958.t1.exon1;Parent=MS.gene78958.t1
chr5.3 CDS 18150884 18151100 18150884 ID=cds.MS.gene78958.t1;Parent=MS.gene78958.t1
chr5.3 exon 18151219 18151319 18151219 ID=MS.gene78958.t1.exon2;Parent=MS.gene78958.t1
chr5.3 CDS 18151219 18151319 18151219 ID=cds.MS.gene78958.t1;Parent=MS.gene78958.t1
chr5.3 exon 18151761 18151969 18151761 ID=MS.gene78958.t1.exon3;Parent=MS.gene78958.t1
chr5.3 CDS 18151761 18151969 18151761 ID=cds.MS.gene78958.t1;Parent=MS.gene78958.t1
chr5.3 exon 18153765 18154287 18153765 ID=MS.gene78958.t1.exon4;Parent=MS.gene78958.t1
chr5.3 CDS 18153765 18154287 18153765 ID=cds.MS.gene78958.t1;Parent=MS.gene78958.t1
Gene Sequence

>MS.gene78958

ATGAATCATCATACCTTACGTTGTTGTGGGAACATACCCAAAACTCATTTCCTATTTTCATTTTTTTCTCTATTTCTTCTCTTCAGTTTCACAAACTCAGCTTTCGACCTTGCAACCATACCCTTCAATGATGGTTATTCTCATCTCTTCGGAGATGGCAACGTTGTTCGTTCCTCCGATGGCAACGGTGTCCAACTCCTCCTCGATCGTTACACCGGTAATTAAATTATTAAATCATATCATACACATGCAAAGTATGATCAATTATGTTTTGTTTCTTGAAGGTTTATATTTTCTTGTATGATTTTTCTTTAATTGATTAATTTTTTATATAGGTTCTGGTTTTATTTCATCAAATATGTATCAACATGGATTCTTCAGCGCAAATATCAAGTTACCGTCGAATTATACTGCTGGAATTTGTGTTGCGTTTTATGTAAGTATACACAAAATAATATTTGTGAATTTCTTGAATCAAACTTTGTTATAGTATATGTTTATTCCTTTCATAATTGATCCTTTTTTGTTACAAAAAGATTGTTTAATATTTTATCATTTATGTGGTGATTAAAAAATTTATAAATATGAGTTAAACTTTCCTTTTACTTGGTGGAGAATTTTCCAAAGAACAAGCAAAGTCAATTATTACGGATTCAGCGTGAAACACCAATTTGTTTACCTCAAAGTTTTCAAAAAGGAAAAAGTCTTCAAACTCTATATAAATATTTTTTGTGTTGGAAGAGTTTTTTTGGGTGAAAGTTATTTTTTTTTTAGAAAAAAAAGGTGAAAGTGATTTGCGTAAGATATATGAAATGAAACGGAACAGTTTTGTTATGTACTTTTGACGTTAACTTTTGAATTTTTGTTGTTATTACAGACATCAAACGGTGATGTGTTTGAGAAAACCCACGATGAGTTGGATTTTGAGTTCCTAGGTAACATAGCTGGAAAACCATGGCGGTTTCAAACAAACTTGTATGGAAATGGAAGTACTCATCGTGGACGTGAGGAACGTTATCGTCTTTGGTTCGACCCAACAAAAGGATACCATAGATATAGCATTCTTTGGACTGCAAAAAATGTCATGTAAGTGTCTCTATTACTACATTCATGTCATGTAAGGTATATTTCATTTGTGTGTTTATGGTTACTTCAAATTTTGGACCCAATACTAAATTTGTGTGGTCCAATAGTAGAATATTAATTGTCTAATGAATTTAAAATGACTCTATATCATCTTATACTTTAAATTGGATCGAACTAAATCACTCTAATTAGAATATTTAACCATAGTAAGCGTCTCAATATATCTCCACAACTTAGATTATTTGCCTTGCCATGAGACTAATTTTTGAGTGACAACTCTATTCCTTTTGGATTTTACCATAATCAAATTACCTTTTAAACTAACAAATGCAAGAATCGAATTCGAGTTCTTTTTTCCTAAGTTAGAGTCATATTATCAACTCTTCTAACATTATGTTGTTTAAATCAATCATATTGAATCGGTCATAGATAATCAAGTTTATAAAATGATTGTTAATACAAACTTCTAAAATGAGTGTCGCCTTCAACTAATTGTCAATGTAAAATAGTTTTACACCAACGAATTCTATATGTTTCCACATAAGCCTATATTGTAACCGATATAAAAAATAAACTTCAATAATACTTAAGTTTCATCGAATGTTAGTATAAAATTATAGGTAGTTTGAACCTATAATACTTGTCCTCTTTTTTATTTTACTTTCCCTTTCCTTATGTGTTTATGGATTGGTTGCTTGTGATTGCAAAAGTTTCCGGGTATGTGTGTATTTGTGGCTTTGGATATTAACTAATAACGTGGTATGTTATGAGATTGAGGTGGTTCATGTTTGACTTAATGTGAGGGGGGAAAAGTGTTTCTTGCGTGTGGGATAAGTCATCTATCTACAACTTGAATTGAGTATGTGTGAGCTAACAAGGATGGAAAGCCATAGTTTTTATTACTAAAGGGATTGTTTTAGATGGTAGTGATGATACTTTGGAGTATTGATCCATTATTTTTCTCATTTTAGAAAGGTATAATTAATCTGGCCCACACTCATGGCCAACTTGAATTTTGTTTCTTACGTATAATTTTATAATTCAATAGTTATTGCTTTTATAGTTTTTTCTTCATTTTCTTTATGGTGATGATAATGATGGTTAAATTTCTAATAAAAAAAATGTGCTTATCGTTATGTTTACGCTATGTGTGTATAATACATGTAATACGTGTTAAATCATAATTAGCCATTATTAATATGGTCCTCATGCCAAACTCTAGAATTCATAGTTTGATAGTTTGATAATCCTGATGTGAAAGCCTATTAAAATAAGGATAATACTAGATTGTGGGGTGAGCAAAAATGCTTTAGTTTGCTAATTAATTAATTAATTAATTTAGCATTACGTATTATGAAAATGATTTAGCGATTTCTTGCGTTTCTAGAATTTGACTGAAATATTTCGTCGACATGACTAAATCCAATTAAACAAAAGCACGTTAGTTAGGAGCTTATGTTGGCCAAAGTCCAATTAAAATTGGCACAACTAGCTAGAATTTAAATAAAGAAAATTAATTCATGCACCATAAATTAATATATGAAGTGTTCATTTTAATTAATATATGTGTATATATGTAAAGCAGTTTTAGTTAGATTACCAAACAAATGCGAACTCATAGATTCCTACAATTTGCCAAACCATGTCCCATTAGTTCCACCTAATTAAACCCGAAATCTAGTTGGCAAAAATTTCTTCTTATTTCATGCGAATATATATGTAACCTTATATTTTGTTCATAGCTATGATTAGTAATTTAATAGTATATATTCATAATATTGTTGAATTGTTGCAGATTTTACATTGATGAAGTTCCAATTAGGGAGGTGTTAAGAAATGAGGAAATGGGAGGTGAATACCCAGTCAAACCAATGTCATTGTATGCTACTATATGGGATGCATCAAATTGGGCAACATCGGGTGGAAAATACAAAGTAAATTATAAATATGCTCCTTTTGTTGTTGAATTTAAGGACCTAGTCCTCAAGGGTTGCTCAGTTGATCCAATTCAAGAAGTATCCGACCCCGACGTTTGCTCCGACCAAAACGTCCATCTTGAAGCTCAAGACTATGCCAATGTGACCCCCATGCGCCGCCTCGCAATGCGAAGGTTCCGCCAACGTTTCATGTACTACTCTTATTGCTATGATACAATTAGGTACCCTATACCACCACCAGAGTGTAATATTATTCCAGCGGAGAAACAAAGATTTAAAGAGACCGGAAGGTTGAAATTTGGAGGAAGCCACCGCCGACATTCTAGGCGGGGTGGTCGTACTTCAACTCCGGTAGATGACACCGATCAAGGTGATATGTGA
Protein sequence

>MS.gene78958.t1

MNHHTLRCCGNIPKTHFLFSFFSLFLLFSFTNSAFDLATIPFNDGYSHLFGDGNVVRSSDGNGVQLLLDRYTGSGFISSNMYQHGFFSANIKLPSNYTAGICVAFYTSNGDVFEKTHDELDFEFLGNIAGKPWRFQTNLYGNGSTHRGREERYRLWFDPTKGYHRYSILWTAKNVIFYIDEVPIREVLRNEEMGGEYPVKPMSLYATIWDASNWATSGGKYKVNYKYAPFVVEFKDLVLKGCSVDPIQEVSDPDVCSDQNVHLEAQDYANVTPMRRLAMRRFRQRFMYYSYCYDTIRYPIPPPECNIIPAEKQRFKETGRLKFGGSHRRHSRRGGRTSTPVDDTDQGDM