AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78960.t1 MTR_5g028930 87.006 354 36 2 377 721 270 622 0.0 623
MS.gene78960.t1 MTR_5g028930 84.211 247 38 1 59 304 32 278 1.75e-133 408
MS.gene78960.t1 MTR_5g028190 48.787 371 166 7 360 715 171 532 2.58e-101 321
MS.gene78960.t1 MTR_5g028190 39.013 223 114 8 116 330 12 220 2.19e-29 123
MS.gene78960.t1 MTR_5g028450 54.485 301 126 3 428 719 1 299 1.45e-96 301
MS.gene78960.t1 MTR_5g028900 81.065 169 20 2 520 688 1 157 3.08e-88 274
MS.gene78960.t1 MTR_5g028130 46.199 342 163 6 388 715 2 336 3.80e-86 275
MS.gene78960.t1 MTR_5g028690 63.000 200 74 0 520 719 40 239 1.29e-81 259
MS.gene78960.t1 MTR_5g028830 54.307 267 104 7 264 526 33 285 1.16e-73 240
MS.gene78960.t1 MTR_5g028920 80.714 140 24 1 387 526 85 221 3.86e-72 235
MS.gene78960.t1 MTR_5g028510 44.361 266 122 8 59 304 68 327 1.92e-53 187
MS.gene78960.t1 MTR_5g028840 47.475 198 104 0 520 717 1 198 2.52e-52 180
MS.gene78960.t1 MTR_2g438740 36.570 309 172 7 419 714 269 566 4.23e-47 176
MS.gene78960.t1 MTR_5g028110 44.724 199 87 3 520 718 1 176 4.94e-45 159
MS.gene78960.t1 MTR_6g017215 44.385 187 99 2 519 705 4 185 9.93e-45 160
MS.gene78960.t1 MTR_3g055310 36.402 239 140 3 465 696 94 327 1.80e-38 146
MS.gene78960.t1 MTR_3g055310 36.402 239 140 3 465 696 157 390 5.67e-38 147
MS.gene78960.t1 MTR_2g438760 34.426 244 150 2 431 665 273 515 1.26e-37 149
MS.gene78960.t1 MTR_3g055310 36.402 239 140 3 465 696 209 442 1.79e-37 146
MS.gene78960.t1 MTR_3g055310 36.402 239 140 3 465 696 235 468 2.91e-37 146
MS.gene78960.t1 MTR_3g055310 36.402 239 140 3 465 696 237 470 2.92e-37 146
MS.gene78960.t1 MTR_3g055310 36.402 239 140 3 465 696 262 495 6.14e-37 145
MS.gene78960.t1 MTR_5g091220 37.121 264 148 5 465 718 350 605 1.20e-36 146
MS.gene78960.t1 MTR_2g438720 32.542 295 181 5 431 714 404 691 2.23e-36 146
MS.gene78960.t1 MTR_2g438700 32.534 292 183 4 431 713 402 688 6.92e-36 145
MS.gene78960.t1 MTR_2g438440 32.423 293 183 5 431 714 399 685 7.53e-34 139
MS.gene78960.t1 MTR_2g438400 31.741 293 185 5 431 714 258 544 2.64e-33 135
MS.gene78960.t1 MTR_2g438640 31.544 298 189 5 426 714 399 690 2.34e-32 134
MS.gene78960.t1 MTR_3g455790 35.268 224 133 3 461 675 341 561 4.22e-31 129
MS.gene78960.t1 MTR_3g452020 31.674 221 137 3 465 675 170 386 1.76e-27 116
MS.gene78960.t1 MTR_2g020510 31.408 277 177 4 428 696 390 661 1.94e-27 119
MS.gene78960.t1 MTR_2g438640 30.872 298 165 5 426 714 399 664 2.16e-27 118
MS.gene78960.t1 MTR_3g452020 31.674 221 137 3 465 675 346 562 5.02e-27 117
MS.gene78960.t1 MTR_2g438640 35.567 194 120 3 521 714 399 587 1.63e-24 109
MS.gene78960.t1 MTR_2g020450 32.491 277 173 6 428 696 393 663 7.64e-24 107
MS.gene78960.t1 MTR_2g020470 30.196 255 149 4 428 674 392 625 2.51e-22 102
MS.gene78960.t1 MTR_2g017930 24.251 668 424 24 108 720 24 664 6.87e-22 101
MS.gene78960.t1 MTR_3g058570 30.075 266 170 4 424 675 80 343 1.51e-21 97.8
MS.gene78960.t1 MTR_3g050500 25.795 283 193 5 427 696 427 705 7.79e-21 98.2
MS.gene78960.t1 MTR_5g085340 27.090 299 181 7 428 703 443 727 2.15e-19 93.6
MS.gene78960.t1 MTR_5g085350 27.931 290 186 6 429 703 425 706 2.23e-19 93.6
MS.gene78960.t1 MTR_5g085350 27.931 290 186 6 429 703 438 719 2.71e-19 93.2
MS.gene78960.t1 MTR_5g085360 33.728 169 106 2 536 704 557 719 7.08e-19 91.7
MS.gene78960.t1 MTR_1g113820 30.000 220 136 5 426 633 274 487 2.40e-17 86.7
MS.gene78960.t1 MTR_3g051060 25.342 292 198 8 429 706 435 720 4.03e-17 86.3
MS.gene78960.t1 MTR_1g113760 28.384 229 144 4 419 633 231 453 8.97e-16 81.3
MS.gene78960.t1 MTR_1g113730 28.070 228 144 5 419 633 37 257 7.81e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78960.t1 AT3G18670 34.754 305 187 4 375 669 295 597 8.34e-48 179
MS.gene78960.t1 AT3G18670 34.932 292 178 4 388 669 253 542 1.58e-47 178
MS.gene78960.t1 AT5G04690 26.667 615 360 18 121 719 111 650 2.00e-42 164
MS.gene78960.t1 AT5G04730 31.054 351 222 8 382 719 250 593 2.80e-39 154
MS.gene78960.t1 AT5G35810 31.724 290 182 3 431 706 38 325 3.17e-39 149
MS.gene78960.t1 AT5G04690 26.179 615 349 19 121 719 111 636 4.68e-39 154
MS.gene78960.t1 AT5G04680 25.785 605 379 20 136 714 119 679 7.65e-39 154
MS.gene78960.t1 AT5G04680 25.373 603 355 19 136 714 119 650 3.47e-37 148
MS.gene78960.t1 AT5G04700 31.511 311 195 6 416 714 351 655 5.58e-37 148
MS.gene78960.t1 AT5G04690 27.990 393 253 7 337 719 244 616 1.37e-36 146
MS.gene78960.t1 AT5G04680 24.917 602 345 19 136 714 119 636 2.17e-35 143
MS.gene78960.t1 AT5G04680 29.781 319 198 7 416 714 215 527 3.52e-34 138
MS.gene78960.t1 AT3G54065 38.068 176 101 2 521 690 22 195 8.39e-28 112

Find 158 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTAAATCCTTTAAGATTT+TGG 0.068288 5.3:+18132664 None:intergenic
AATCGTCTGTTTGGAAAATT+AGG 0.140948 5.3:+18133460 None:intergenic
TACTTGATCCAAAATCTTAA+AGG 0.197870 5.3:-18132672 MS.gene78960:CDS
CAAAATCTTAAAGGATTTAA+TGG 0.220292 5.3:-18132663 MS.gene78960:CDS
TTGTCAAAGGTGAGCACTTC+TGG 0.227767 5.3:+18135564 None:intergenic
TGATTCTGCTGAGGCTTTCT+TGG 0.229271 5.3:-18135469 MS.gene78960:CDS
TGAATGTAATCATTCCATTC+TGG 0.242487 5.3:+18132592 None:intergenic
TGGAAGAGAATTCTGAAATA+TGG 0.262858 5.3:-18135449 MS.gene78960:CDS
CTTAAAGGATTTAATGGTAT+AGG 0.282324 5.3:-18132657 MS.gene78960:CDS
TGTATCAAGGCCGAGGTATT+TGG 0.303379 5.3:-18133838 MS.gene78960:intron
AAACAATTTGAAGACAACTA+TGG 0.308546 5.3:-18133135 MS.gene78960:CDS
TACTCTAAAATTTCGGATTC+GGG 0.309902 5.3:+18133108 None:intergenic
TTAAAGGATTTAATGGTATA+GGG 0.316856 5.3:-18132656 MS.gene78960:CDS
ATACTCTAAAATTTCGGATT+CGG 0.321486 5.3:+18133107 None:intergenic
TTCAAGTATCTAGATATCTT+TGG 0.326074 5.3:-18132829 MS.gene78960:intron
TCGTATATACTCTAAAATTT+CGG 0.335462 5.3:+18133101 None:intergenic
TATTCCCACAACTTCATATA+AGG 0.341261 5.3:+18132701 None:intergenic
ATTCTCCACCTTAGTTTCAT+TGG 0.348105 5.3:-18133500 MS.gene78960:CDS
TGAAACATAAAGATCTATTC+AGG 0.350172 5.3:-18134278 MS.gene78960:CDS
ATCTATCCGCGGTGGCAGAT+GGG 0.360129 5.3:-18132361 MS.gene78960:CDS
TATACCTCTACCACTGTTAT+CGG 0.368684 5.3:+18132527 None:intergenic
GTGTATGGTAGATAGCAAAA+TGG 0.370290 5.3:-18134019 MS.gene78960:CDS
TCATAAATTTGCATACTTGT+TGG 0.373516 5.3:-18132860 MS.gene78960:CDS
CATCTATCCGCGGTGGCAGA+TGG 0.378276 5.3:-18132362 MS.gene78960:CDS
CGACTCATATATTCTCTCAA+TGG 0.381718 5.3:-18132465 MS.gene78960:CDS
GAATGTAATCATTCCATTCT+GGG 0.389524 5.3:+18132593 None:intergenic
GTAGGAAGAAACAGAAACTT+TGG 0.394844 5.3:+18133000 None:intergenic
CGGAGAACTCCCCGTTCATA+TGG 0.400120 5.3:-18133965 MS.gene78960:CDS
TCTCTTTGTACTTGCATAGC+AGG 0.405583 5.3:+18132336 None:intergenic
TGCAGCAGCCTTTACTATCC+CGG 0.408013 5.3:-18130678 MS.gene78960:CDS
GGTTGGAGGAATCGTCTGTT+TGG 0.410061 5.3:+18133451 None:intergenic
CTTTCAATGAATACATCATA+AGG 0.413529 5.3:+18130794 None:intergenic
CAAGGCCTTGAGAAAATCTA+TGG 0.416527 5.3:+18130511 None:intergenic
AACTAAGGTGGAGAATTTGT+TGG 0.419751 5.3:+18133507 None:intergenic
TTTCTCTGTCTGTTCCATGA+TGG 0.424250 5.3:-18130453 MS.gene78960:CDS
TGTATGGTAGATAGCAAAAT+GGG 0.429850 5.3:-18134018 MS.gene78960:CDS
GATGCTAGGAGAATGAAAAC+TGG 0.435157 5.3:+18130335 None:intergenic
GCTTCATGAAATAGATCATC+CGG 0.442595 5.3:+18133571 None:intergenic
TTACCGGCAGCCATATGAAC+GGG 0.444007 5.3:+18133955 None:intergenic
TTGCCTGTGAAGTTAATAAC+TGG 0.445321 5.3:-18130491 MS.gene78960:CDS
AAATTTAGCCAATGAAACTA+AGG 0.448141 5.3:+18133492 None:intergenic
TATCTAGATACTTGAAAACT+TGG 0.453234 5.3:+18132836 None:intergenic
GTTCATATGGCTGCCGGTAA+AGG 0.457607 5.3:-18133952 MS.gene78960:CDS
CTAGGACCCATCTTGTCCCT+TGG 0.457620 5.3:-18130365 MS.gene78960:CDS
GCTACTTGACCGATGTATCA+AGG 0.458882 5.3:-18133851 MS.gene78960:CDS
GTCAGCACCTGGCCTCCTCA+TGG 0.460694 5.3:-18133025 MS.gene78960:CDS
CATATATTCTCTCAATGGAT+TGG 0.461472 5.3:-18132460 MS.gene78960:CDS
GGTGGAAACAATCAACAAAC+TGG 0.464454 5.3:-18130656 MS.gene78960:CDS
AACTGGTACACCCATCTCCT+TGG 0.464757 5.3:-18130639 MS.gene78960:CDS
TTTCTTTACTCAGAAACTCC+TGG 0.465154 5.3:-18133910 MS.gene78960:CDS
ATATGCTAGATGTGGCTTTG+AGG 0.472243 5.3:-18133609 MS.gene78960:intron
CTTTCATTGTGTCAGGAACA+AGG 0.474209 5.3:-18132746 MS.gene78960:intron
TGAAGATATCAAAATAGATC+AGG 0.475051 5.3:-18134232 MS.gene78960:CDS
GAAATCAATGCAGGCGGTGG+AGG 0.476649 5.3:-18130867 MS.gene78960:intron
CCCACAGACCTTGCCCCATC+AGG 0.478240 5.3:+18135508 None:intergenic
AACAATTTGAAGACAACTAT+GGG 0.483905 5.3:-18133134 MS.gene78960:CDS
ATCGTCTGTTTGGAAAATTA+GGG 0.484326 5.3:+18133461 None:intergenic
GCAAAATCACACTGGCACTA+GGG 0.484922 5.3:-18130396 MS.gene78960:CDS
CAAAATCACACTGGCACTAG+GGG 0.490330 5.3:-18130395 MS.gene78960:CDS
TAACAAAGCAAGACAGGCAT+GGG 0.491773 5.3:-18134095 MS.gene78960:CDS
AGCCACAAGTGTTCCCTCCT+CGG 0.495847 5.3:-18135598 MS.gene78960:CDS
ACCTGATGGGGCAAGGTCTG+TGG 0.496442 5.3:-18135509 MS.gene78960:CDS
CTGTGGGATGTTATCAGTAC+TGG 0.497648 5.3:-18135492 MS.gene78960:CDS
CAGGCATGGGGATACAGCTC+TGG 0.501028 5.3:-18134082 MS.gene78960:CDS
AGCAAAATCACACTGGCACT+AGG 0.501547 5.3:-18130397 MS.gene78960:CDS
AATAGATATAGTGAAGTGTA+TGG 0.503931 5.3:-18134034 MS.gene78960:CDS
TGGAACAGACAGAGAAAAGA+AGG 0.504114 5.3:+18130459 None:intergenic
TTTCTTCCTACAAAACTACT+TGG 0.507301 5.3:-18132988 MS.gene78960:intron
TGGAAATGTTGGTGAGAGAT+GGG 0.507766 5.3:-18134131 MS.gene78960:CDS
CAGCTTTCACTAGCTCCTCA+TGG 0.511981 5.3:+18130771 None:intergenic
AACACTACCAAGGGACAAGA+TGG 0.514768 5.3:+18130358 None:intergenic
GCAGCAGCCTTTACTATCCC+GGG 0.517541 5.3:-18130677 MS.gene78960:CDS
CTCCCCGTTCATATGGCTGC+CGG 0.519011 5.3:-18133958 MS.gene78960:CDS
AGGCCAGTTATTAACTTCAC+AGG 0.525985 5.3:+18130488 None:intergenic
AGTTTGTAACAAAGCAAGAC+AGG 0.526620 5.3:-18134101 MS.gene78960:CDS
CTTCACGTTGCAGTAAATGC+TGG 0.528614 5.3:-18134168 MS.gene78960:CDS
TTTGGAACCATGAGGAGGCC+AGG 0.531236 5.3:+18133018 None:intergenic
GTTTGTTGATTGTTTCCACC+CGG 0.533450 5.3:+18130659 None:intergenic
CATCATCTTCTGTAAAATGT+TGG 0.533744 5.3:-18133047 MS.gene78960:CDS
TATACCTTATATGAAGTTGT+GGG 0.534682 5.3:-18132705 MS.gene78960:CDS
GTTTCCACCCGGGATAGTAA+AGG 0.537498 5.3:+18130670 None:intergenic
GTGGAAATGTTGGTGAGAGA+TGG 0.538188 5.3:-18134132 MS.gene78960:CDS
CCTTTGACAACTATGAAAGA+TGG 0.538615 5.3:-18135551 MS.gene78960:CDS
ATATACCTTATATGAAGTTG+TGG 0.540164 5.3:-18132706 MS.gene78960:CDS
TAGCGTCCTAGCTGAAATAG+AGG 0.542609 5.3:+18134191 None:intergenic
GAGGTTACTCAAACTTTACC+CGG 0.544096 5.3:-18133590 MS.gene78960:CDS
CTGCCACCGCGGATAGATGA+AGG 0.545727 5.3:+18132366 None:intergenic
CCTGATGGGGCAAGGTCTGT+GGG 0.546360 5.3:-18135508 MS.gene78960:CDS
ACAAGTGTTCCCTCCTCGGT+TGG 0.547525 5.3:-18135594 MS.gene78960:CDS
CAGAGAAAAGAAGGAGCGCA+AGG 0.547894 5.3:+18130468 None:intergenic
GTAAAATGTTGGTCAGCACC+TGG 0.550261 5.3:-18133036 MS.gene78960:CDS
CTGATGACGCATAATACAAA+CGG 0.552597 5.3:-18133985 MS.gene78960:CDS
CTCAGATACGCTTCATCTCG+AGG 0.552778 5.3:-18130313 MS.gene78960:CDS
CATGAGGAGCTAGTGAAAGC+TGG 0.556609 5.3:-18130770 MS.gene78960:CDS
TTCTCTCAATGGATTGGAGA+AGG 0.559507 5.3:-18132454 MS.gene78960:CDS
GTCACCGATAACAGTGGTAG+AGG 0.561566 5.3:-18132531 MS.gene78960:CDS
AGCGTAAAATGCAACCATCA+TGG 0.563306 5.3:+18130439 None:intergenic
AGCTAGTTGTTATATAGCTG+TGG 0.565436 5.3:-18130726 MS.gene78960:CDS
TCGGTGACTGAAAGTAGATA+AGG 0.565683 5.3:+18132546 None:intergenic
AACCGAGGAGGGAACACTTG+TGG 0.567489 5.3:+18135596 None:intergenic
CCATCTTTCATAGTTGTCAA+AGG 0.570913 5.3:+18135551 None:intergenic
CTATTTCATGAAGCCTCGTA+CGG 0.571194 5.3:-18133562 MS.gene78960:CDS
CAGTACTGGTGATTCTGCTG+AGG 0.573080 5.3:-18135478 MS.gene78960:CDS
TTACATTCATAAATGCTATG+AGG 0.573706 5.3:-18132578 MS.gene78960:CDS
TCTATCCGCGGTGGCAGATG+GGG 0.577220 5.3:-18132360 MS.gene78960:CDS
ATACCTCGGCCTTGATACAT+CGG 0.580322 5.3:+18133842 None:intergenic
CTGCTGCAAACATGACAGTA+AGG 0.582538 5.3:+18130693 None:intergenic
TTTCATTGTGTCAGGAACAA+GGG 0.587003 5.3:-18132745 MS.gene78960:intron
ATGTTGTATGCTGCCCAGAA+TGG 0.587233 5.3:-18132606 MS.gene78960:CDS
GTTGTTGATTTCACCGTACG+AGG 0.589122 5.3:+18133549 None:intergenic
ACAGTGGTAGAGGTATACTT+TGG 0.597652 5.3:-18132521 MS.gene78960:CDS
AGTTATTAACTTCACAGGCA+AGG 0.599770 5.3:+18130493 None:intergenic
TGACCGATGTATCAAGGCCG+AGG 0.600488 5.3:-18133845 MS.gene78960:CDS
GGAACTATTCCAACCGAGGA+GGG 0.602199 5.3:+18135585 None:intergenic
GTAACAAAGCAAGACAGGCA+TGG 0.608339 5.3:-18134096 MS.gene78960:CDS
TTTAGCCAATGAAACTAAGG+TGG 0.609057 5.3:+18133495 None:intergenic
ATATAACCTCTATTTCAGCT+AGG 0.614768 5.3:-18134197 MS.gene78960:CDS
CCTTGAGAAAATCTATGGCA+TGG 0.614844 5.3:+18130516 None:intergenic
AGTTCTGCATCCGATGTGCA+AGG 0.618993 5.3:-18130843 MS.gene78960:CDS
TGAAGCGTATCTGAGATGCT+AGG 0.626094 5.3:+18130321 None:intergenic
ACCTTGCTCAATATCTGTGG+TGG 0.626758 5.3:+18135389 None:intergenic
ACATAAAGATCTATTCAGGA+TGG 0.629399 5.3:-18134274 MS.gene78960:CDS
TGAAAACTGGAACACTACCA+AGG 0.630318 5.3:+18130348 None:intergenic
CATTGAGAGAATATATGAGT+CGG 0.630804 5.3:+18132466 None:intergenic
TTTACCGGCAGCCATATGAA+CGG 0.632786 5.3:+18133954 None:intergenic
GAAATACAAGACTGAAGTGG+CGG 0.633365 5.3:+18130562 None:intergenic
AATTCGCTTACCAAATACCT+CGG 0.633451 5.3:+18133828 None:intergenic
AGTGATGATAGATACCGCAT+TGG 0.633541 5.3:+18130586 None:intergenic
ACACTACCAAGGGACAAGAT+GGG 0.634544 5.3:+18130359 None:intergenic
CTTCATGAAATAGATCATCC+GGG 0.637291 5.3:+18133572 None:intergenic
TTTGTTGATTGTTTCCACCC+GGG 0.637356 5.3:+18130660 None:intergenic
GAAAACTGGAACACTACCAA+GGG 0.638165 5.3:+18130349 None:intergenic
CTATTCAGGATGGTAGAGAG+AGG 0.641118 5.3:-18134264 MS.gene78960:CDS
GCCACCACAGATATTGAGCA+AGG 0.641422 5.3:-18135390 MS.gene78960:intron
AATGAAATACAAGACTGAAG+TGG 0.641503 5.3:+18130559 None:intergenic
TTAGTTCCTTCATCTATCCG+CGG 0.642808 5.3:-18132372 MS.gene78960:CDS
ATCTTAAAGCAAAATCACAC+TGG 0.644221 5.3:-18130404 MS.gene78960:CDS
GATTAAATATCGCACAGACT+CGG 0.647343 5.3:-18132427 MS.gene78960:CDS
AATCAACAACGAAGAACGAA+AGG 0.650130 5.3:-18133536 MS.gene78960:CDS
CTAACCTTGCTCAATATCTG+TGG 0.656587 5.3:+18135386 None:intergenic
TGGAACTATTCCAACCGAGG+AGG 0.657719 5.3:+18135584 None:intergenic
TGACAATAATCTGTTGCACA+TGG 0.661381 5.3:-18132403 MS.gene78960:CDS
CAACAACGAAGAACGAAAGG+AGG 0.662223 5.3:-18133533 MS.gene78960:CDS
ATTCTGGGCAGCATACAACA+TGG 0.675561 5.3:+18132608 None:intergenic
AAAATCACACTGGCACTAGG+GGG 0.675564 5.3:-18130394 MS.gene78960:CDS
TTCTGGAACTATTCCAACCG+AGG 0.676113 5.3:+18135581 None:intergenic
GTTCCTTCATCTATCCGCGG+TGG 0.684957 5.3:-18132369 MS.gene78960:CDS
AAATCACACTGGCACTAGGG+GGG 0.687025 5.3:-18130393 MS.gene78960:CDS
AATGTTTCTCTTAGCCAATG+CGG 0.690279 5.3:-18130600 MS.gene78960:CDS
CAGGACCCCATCTGCCACCG+CGG 0.696635 5.3:+18132355 None:intergenic
GCAGCCTTTACTATCCCGGG+TGG 0.698771 5.3:-18130674 MS.gene78960:CDS
CTTTCAGTCACCGATAACAG+TGG 0.701123 5.3:-18132537 MS.gene78960:CDS
TACCGGCAGCCATATGAACG+GGG 0.702927 5.3:+18133956 None:intergenic
GAAACTTTGGAACCATGAGG+AGG 0.707795 5.3:+18133013 None:intergenic
ACAGAAACTTTGGAACCATG+AGG 0.717371 5.3:+18133010 None:intergenic
AACAAAGCAAGACAGGCATG+GGG 0.723479 5.3:-18134094 MS.gene78960:CDS
GTATGGTAGATAGCAAAATG+GGG 0.726223 5.3:-18134017 MS.gene78960:CDS
TGTATTCATTGAAAGCCATG+AGG 0.745296 5.3:-18130786 MS.gene78960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAAATTATGTTTATTAAAT+GGG + chr5.3:18130938-18130957 None:intergenic 10.0%
!! TCTAAATTATGTTTATTAAA+TGG + chr5.3:18130939-18130958 None:intergenic 10.0%
!!! ACTAATTTTTGAATAATTTA+AGG + chr5.3:18130620-18130639 None:intergenic 10.0%
!!! ATTCAATTATTTTTTTAAGT+CGG + chr5.3:18130749-18130768 None:intergenic 10.0%
!!! TGTAATAATAAAATTGTTTT+AGG + chr5.3:18132710-18132729 None:intergenic 10.0%
!!! TTATTTGTATTTATTTTTAC+TGG - chr5.3:18132963-18132982 MS.gene78960:intron 10.0%
!! AATATTTATGCATGTTTAAA+TGG - chr5.3:18131552-18131571 MS.gene78960:intron 15.0%
!! AATCAAAAGAGAATTTAAAT+GGG + chr5.3:18130971-18130990 None:intergenic 15.0%
!! TAATCAAAAGAGAATTTAAA+TGG + chr5.3:18130972-18130991 None:intergenic 15.0%
!! TCGATTATTCAATAAAAAAT+TGG + chr5.3:18133839-18133858 None:intergenic 15.0%
!! TGAATAACTAAATATTAGTT+AGG + chr5.3:18133955-18133974 None:intergenic 15.0%
!!! AAAATTAGTTTCTTGTAAAT+AGG + chr5.3:18131386-18131405 None:intergenic 15.0%
!!! AACACTTGTAAAAATATTTT+TGG + chr5.3:18134951-18134970 None:intergenic 15.0%
!!! ATTTTTCACTAAAATTGATA+TGG - chr5.3:18132607-18132626 MS.gene78960:CDS 15.0%
!!! TTGGAACAATATTTAAAATT+AGG - chr5.3:18134843-18134862 MS.gene78960:intron 15.0%
!! AACATGCATAAATATTATCT+TGG + chr5.3:18131548-18131567 None:intergenic 20.0%
!! AATAAACAAATCCATTTACA+AGG + chr5.3:18132933-18132952 None:intergenic 20.0%
!! ATAAACAAATCCATTTACAA+GGG + chr5.3:18132932-18132951 None:intergenic 20.0%
!! ATATAGATTGAATTTATGTG+TGG - chr5.3:18132242-18132261 MS.gene78960:intron 20.0%
!! ATATAGTAATCACATTCAAA+GGG - chr5.3:18134493-18134512 MS.gene78960:intron 20.0%
!! ATTTAATAGTTCCAATTACA+AGG - chr5.3:18132069-18132088 MS.gene78960:intron 20.0%
!! CAAAATCTTAAAGGATTTAA+TGG - chr5.3:18133214-18133233 MS.gene78960:intron 20.0%
!! GATATAATTCAAAGTTAGTA+AGG + chr5.3:18133986-18134005 None:intergenic 20.0%
!! TACTATATATTTGTATTAGC+TGG + chr5.3:18134481-18134500 None:intergenic 20.0%
!! TATATAGTAATCACATTCAA+AGG - chr5.3:18134492-18134511 MS.gene78960:intron 20.0%
!! TTAAAGGATTTAATGGTATA+GGG - chr5.3:18133221-18133240 MS.gene78960:intron 20.0%
!!! AAACAAAGTTTCATTTTCTA+AGG + chr5.3:18134167-18134186 None:intergenic 20.0%
!!! AACAAAGTTTCATTTTCTAA+GGG + chr5.3:18134166-18134185 None:intergenic 20.0%
!!! ACAATATTTAAAATTAGGAG+TGG - chr5.3:18134848-18134867 MS.gene78960:intron 20.0%
!!! ATATTGATTTTTATGCGATT+AGG - chr5.3:18133863-18133882 MS.gene78960:CDS 20.0%
!!! ATCTTTTGATTACAATGTAA+CGG - chr5.3:18131002-18131021 MS.gene78960:intron 20.0%
!!! CATTAAATCCTTTAAGATTT+TGG + chr5.3:18133216-18133235 None:intergenic 20.0%
!!! CTCTCATTTAATTTGATTTT+CGG - chr5.3:18133083-18133102 MS.gene78960:CDS 20.0%
!!! GGTATAATTTAAAGTTAGTT+AGG + chr5.3:18134460-18134479 None:intergenic 20.0%
!!! TATTGATTTTTATGCGATTA+GGG - chr5.3:18133864-18133883 MS.gene78960:CDS 20.0%
!!! TCGTATATACTCTAAAATTT+CGG + chr5.3:18132779-18132798 None:intergenic 20.0%
!!! TCTATTTTGATATCTTCAAT+AGG + chr5.3:18131643-18131662 None:intergenic 20.0%
!!! TTATAAATGAAGTATTTTGC+AGG + chr5.3:18132450-18132469 None:intergenic 20.0%
!!! TTTAAATGTATTTTGATCCA+AGG + chr5.3:18135258-18135277 None:intergenic 20.0%
! AAACAATTTGAAGACAACTA+TGG - chr5.3:18132742-18132761 MS.gene78960:intron 25.0%
! AAAGAAAGTAATGAGAACTT+TGG - chr5.3:18133782-18133801 MS.gene78960:intron 25.0%
! AAATTTAGCCAATGAAACTA+AGG + chr5.3:18132388-18132407 None:intergenic 25.0%
! AACAATTTGAAGACAACTAT+GGG - chr5.3:18132743-18132762 MS.gene78960:intron 25.0%
! AAGAGAAATTCAATGGTTTA+AGG - chr5.3:18133558-18133577 MS.gene78960:CDS 25.0%
! AAGTACAAAGAGAAATTCAA+TGG - chr5.3:18133551-18133570 MS.gene78960:CDS 25.0%
! AATAACACACGACAATTAAA+TGG - chr5.3:18134792-18134811 MS.gene78960:intron 25.0%
! AATAGATATAGTGAAGTGTA+TGG - chr5.3:18131843-18131862 MS.gene78960:intron 25.0%
! ACAATGAAAAATCGCATTAA+GGG - chr5.3:18135599-18135618 MS.gene78960:CDS 25.0%
! ATATACCTTATATGAAGTTG+TGG - chr5.3:18133171-18133190 MS.gene78960:intron 25.0%
! ATGCATAAATATTATCTTGG+AGG + chr5.3:18131545-18131564 None:intergenic 25.0%
! CATAAGAACGTGATAATTAT+TGG - chr5.3:18134704-18134723 MS.gene78960:intron 25.0%
! CATATTATTCAACTATCATG+TGG - chr5.3:18131129-18131148 MS.gene78960:intron 25.0%
! CCAAAACATTTCTCATATAA+GGG - chr5.3:18132166-18132185 MS.gene78960:intron 25.0%
! CCTCTCAAAATATAATTCAA+AGG + chr5.3:18132638-18132657 None:intergenic 25.0%
! CGATATGGTAAATATTTCAA+AGG - chr5.3:18131027-18131046 MS.gene78960:intron 25.0%
! CTTAAAGGATTTAATGGTAT+AGG - chr5.3:18133220-18133239 MS.gene78960:intron 25.0%
! CTTATGAAAAATTACCTGAT+GGG - chr5.3:18130355-18130374 MS.gene78960:CDS 25.0%
! CTTTCAATGAATACATCATA+AGG + chr5.3:18135086-18135105 None:intergenic 25.0%
! GAATTGACAGAATAATTAAC+AGG - chr5.3:18133720-18133739 MS.gene78960:intron 25.0%
! GCATATTTACTAGCTAATAA+GGG + chr5.3:18134528-18134547 None:intergenic 25.0%
! GGCAATGATCAATATTAAAA+AGG - chr5.3:18130847-18130866 MS.gene78960:CDS 25.0%
! GTCTATCTATCTATCTATAA+CGG - chr5.3:18133617-18133636 MS.gene78960:intron 25.0%
! TAAACAAATCCATTTACAAG+GGG + chr5.3:18132931-18132950 None:intergenic 25.0%
! TACAATGAAAAATCGCATTA+AGG - chr5.3:18135598-18135617 MS.gene78960:CDS 25.0%
! TACTTGATCCAAAATCTTAA+AGG - chr5.3:18133205-18133224 MS.gene78960:intron 25.0%
! TATACCTTATATGAAGTTGT+GGG - chr5.3:18133172-18133191 MS.gene78960:intron 25.0%
! TATAGTAATCACATTCAAAG+GGG - chr5.3:18134494-18134513 MS.gene78960:intron 25.0%
! TATCTAGATACTTGAAAACT+TGG + chr5.3:18133044-18133063 None:intergenic 25.0%
! TATTAAATGGGATCAAAGAA+CGG + chr5.3:18130926-18130945 None:intergenic 25.0%
! TCATAAATTTGCATACTTGT+TGG - chr5.3:18133017-18133036 MS.gene78960:CDS 25.0%
! TCCAAAACATTTCTCATATA+AGG - chr5.3:18132165-18132184 MS.gene78960:intron 25.0%
! TCTATCTATCTATCTATAAC+GGG - chr5.3:18133618-18133637 MS.gene78960:intron 25.0%
! TCTTATGAAAAATTACCTGA+TGG - chr5.3:18130354-18130373 MS.gene78960:CDS 25.0%
! TGAAACATAAAGATCTATTC+AGG - chr5.3:18131599-18131618 MS.gene78960:intron 25.0%
! TGAAGATATCAAAATAGATC+AGG - chr5.3:18131645-18131664 MS.gene78960:intron 25.0%
! TGCATAAATATTATCTTGGA+GGG + chr5.3:18131544-18131563 None:intergenic 25.0%
! TGCATATTTACTAGCTAATA+AGG + chr5.3:18134529-18134548 None:intergenic 25.0%
! TTACATTCATAAATGCTATG+AGG - chr5.3:18133299-18133318 MS.gene78960:intron 25.0%
! TTAGATGCTTCATACATAAA+AGG + chr5.3:18132493-18132512 None:intergenic 25.0%
! TTAGTTTAAACGATAGGAAA+AGG + chr5.3:18134434-18134453 None:intergenic 25.0%
! TTATGAAAAATTACCTGATG+GGG - chr5.3:18130356-18130375 MS.gene78960:CDS 25.0%
! TTCAAGTATCTAGATATCTT+TGG - chr5.3:18133048-18133067 MS.gene78960:CDS 25.0%
! TTCTTATAAATAGGATCAGA+CGG - chr5.3:18131489-18131508 MS.gene78960:intron 25.0%
!! AGTTGTCTTCAAATTGTTTT+AGG + chr5.3:18132741-18132760 None:intergenic 25.0%
!! GTCGATTGTTTCTTATAAAT+AGG - chr5.3:18131480-18131499 MS.gene78960:intron 25.0%
!! TATGTATGAAGCATCTAATA+TGG - chr5.3:18132495-18132514 MS.gene78960:CDS 25.0%
!! TATTGAATAGTTGATGTATC+TGG + chr5.3:18131450-18131469 None:intergenic 25.0%
!!! ACTTTTTAACCCTTTTTAAG+TGG + chr5.3:18130877-18130896 None:intergenic 25.0%
!!! AGTGAAATCCACTTTTAAAT+CGG + chr5.3:18132523-18132542 None:intergenic 25.0%
!!! ATACTCTAAAATTTCGGATT+CGG + chr5.3:18132773-18132792 None:intergenic 25.0%
!!! CCTTTGAATTATATTTTGAG+AGG - chr5.3:18132635-18132654 MS.gene78960:CDS 25.0%
!!! GTTTTTTTAGATGGATTCTA+AGG + chr5.3:18134682-18134701 None:intergenic 25.0%
!!! TCTTATGTCGTTTTTTTAGA+TGG + chr5.3:18134691-18134710 None:intergenic 25.0%
!!! TTCTAAGATCATTTTTGAGA+TGG + chr5.3:18134634-18134653 None:intergenic 25.0%
AAAAGGAGAACCACTTAAAA+AGG - chr5.3:18130864-18130883 MS.gene78960:intron 30.0%
AAAGGAGAACCACTTAAAAA+GGG - chr5.3:18130865-18130884 MS.gene78960:intron 30.0%
AAGCATTTGAGCAACAAAAA+AGG - chr5.3:18130451-18130470 MS.gene78960:CDS 30.0%
AATAACTATATCCTCTTGTG+AGG + chr5.3:18134350-18134369 None:intergenic 30.0%
AATCAATCTTGATAAACTGC+AGG - chr5.3:18131239-18131258 MS.gene78960:intron 30.0%
AATCGTCTGTTTGGAAAATT+AGG + chr5.3:18132420-18132439 None:intergenic 30.0%
AATGAAATACAAGACTGAAG+TGG + chr5.3:18135321-18135340 None:intergenic 30.0%
ACACTTCCCTAAAAAAAACA+AGG + chr5.3:18130597-18130616 None:intergenic 30.0%
ACATAAAGATCTATTCAGGA+TGG - chr5.3:18131603-18131622 MS.gene78960:intron 30.0%
ACTCTTGTATGAAAGTGATT+TGG - chr5.3:18133754-18133773 MS.gene78960:intron 30.0%
AGGGACTATTTATGAAACAT+GGG - chr5.3:18133883-18133902 MS.gene78960:CDS 30.0%
ATAGATAGAGATGAGAGAAA+TGG + chr5.3:18133584-18133603 None:intergenic 30.0%
ATATAACCTCTATTTCAGCT+AGG - chr5.3:18131680-18131699 MS.gene78960:intron 30.0%
ATCAATCTTGATAAACTGCA+GGG - chr5.3:18131240-18131259 MS.gene78960:intron 30.0%
ATCGTCTGTTTGGAAAATTA+GGG + chr5.3:18132419-18132438 None:intergenic 30.0%
ATCTTAAAGCAAAATCACAC+TGG - chr5.3:18135473-18135492 MS.gene78960:CDS 30.0%
CATACATAAAAGGCAAATCT+TGG + chr5.3:18132483-18132502 None:intergenic 30.0%
CATATATTCTCTCAATGGAT+TGG - chr5.3:18133417-18133436 MS.gene78960:intron 30.0%
CATCATCTTCTGTAAAATGT+TGG - chr5.3:18132830-18132849 MS.gene78960:CDS 30.0%
CATTGAGAGAATATATGAGT+CGG + chr5.3:18133414-18133433 None:intergenic 30.0%
CTAACTCAAAGGATTGATTA+GGG - chr5.3:18131285-18131304 MS.gene78960:intron 30.0%
GAATGTAATCATTCCATTCT+GGG + chr5.3:18133287-18133306 None:intergenic 30.0%
TAGGGACTATTTATGAAACA+TGG - chr5.3:18133882-18133901 MS.gene78960:CDS 30.0%
TAGTTTCTTGTAAATAGGAC+CGG + chr5.3:18131381-18131400 None:intergenic 30.0%
TATTCCCACAACTTCATATA+AGG + chr5.3:18133179-18133198 None:intergenic 30.0%
TCAATTAAGCAAGGAGAAAT+CGG + chr5.3:18134142-18134161 None:intergenic 30.0%
TCTGAAAAATGTGGAAATGT+TGG - chr5.3:18131735-18131754 MS.gene78960:intron 30.0%
TGAATGTAATCATTCCATTC+TGG + chr5.3:18133288-18133307 None:intergenic 30.0%
TGACTTCATATCCTTGTAAT+TGG + chr5.3:18132083-18132102 None:intergenic 30.0%
TGTATGGTAGATAGCAAAAT+GGG - chr5.3:18131859-18131878 MS.gene78960:intron 30.0%
TTCCCTAAAAAAAACAAGGA+CGG + chr5.3:18130593-18130612 None:intergenic 30.0%
TTGCATGTTAAGCATTCTAA+TGG + chr5.3:18134303-18134322 None:intergenic 30.0%
TTTCTTCCTACAAAACTACT+TGG - chr5.3:18132889-18132908 MS.gene78960:intron 30.0%
! AGATTGTTTGAAATCAATGC+AGG - chr5.3:18135001-18135020 MS.gene78960:intron 30.0%
! AGGTTGTTAGTTTAAACGAT+AGG + chr5.3:18134440-18134459 None:intergenic 30.0%
! CCCTTATATGAGAAATGTTT+TGG + chr5.3:18132169-18132188 None:intergenic 30.0%
! TAATGAGAACTTTGGAGATT+AGG - chr5.3:18133790-18133809 MS.gene78960:intron 30.0%
! TTTACGACTAACTTGATTTG+AGG + chr5.3:18134018-18134037 None:intergenic 30.0%
!! AAATGAAGTATTTTGCAGGT+TGG + chr5.3:18132446-18132465 None:intergenic 30.0%
!! GAGAATTTAAATGGGTTGAA+CGG + chr5.3:18130963-18130982 None:intergenic 30.0%
!! GCTATTTTGTTAACTATCGT+GGG - chr5.3:18131307-18131326 MS.gene78960:intron 30.0%
!! GTGAAATCCACTTTTAAATC+GGG + chr5.3:18132522-18132541 None:intergenic 30.0%
!! TACTCTAAAATTTCGGATTC+GGG + chr5.3:18132772-18132791 None:intergenic 30.0%
!! TGGAAGAGAATTCTGAAATA+TGG - chr5.3:18130428-18130447 MS.gene78960:CDS 30.0%
!! TTTTTAGATGGATTCTAAGG+TGG + chr5.3:18134679-18134698 None:intergenic 30.0%
!!! AACATACCAAGTAGTTTTGT+AGG + chr5.3:18132898-18132917 None:intergenic 30.0%
!!! ACCAATTTTAAAAGTGTCAG+CGG + chr5.3:18130722-18130741 None:intergenic 30.0%
!!! ATACCGTCCTTGTTTTTTTT+AGG - chr5.3:18130587-18130606 MS.gene78960:CDS 30.0%
!!! CATTTTTGAGATGGATTCTA+AGG + chr5.3:18134625-18134644 None:intergenic 30.0%
!!! CATTTTTTTGTGTCCTTTAC+CGG + chr5.3:18131941-18131960 None:intergenic 30.0%
!!! TACCGTCCTTGTTTTTTTTA+GGG - chr5.3:18130588-18130607 MS.gene78960:CDS 30.0%
AAATCCATTTACAAGGGGAA+TGG + chr5.3:18132926-18132945 None:intergenic 35.0%
AACACACGACAATTAAATGG+TGG - chr5.3:18134795-18134814 MS.gene78960:intron 35.0%
AACTAAGGTGGAGAATTTGT+TGG + chr5.3:18132373-18132392 None:intergenic 35.0%
AATCAACAACGAAGAACGAA+AGG - chr5.3:18132341-18132360 MS.gene78960:intron 35.0%
AATGGAAGAGATGAACTTGA+AGG + chr5.3:18134285-18134304 None:intergenic 35.0%
AATGTTTCTCTTAGCCAATG+CGG - chr5.3:18135277-18135296 MS.gene78960:intron 35.0%
AATTCGCTTACCAAATACCT+CGG + chr5.3:18132052-18132071 None:intergenic 35.0%
ACACACGACAATTAAATGGT+GGG - chr5.3:18134796-18134815 MS.gene78960:intron 35.0%
AGCTAGTTGTTATATAGCTG+TGG - chr5.3:18135151-18135170 MS.gene78960:intron 35.0%
AGTTATTAACTTCACAGGCA+AGG + chr5.3:18135387-18135406 None:intergenic 35.0%
AGTTTGTAACAAAGCAAGAC+AGG - chr5.3:18131776-18131795 MS.gene78960:intron 35.0%
ATATGGACCCGATTTAAAAG+TGG - chr5.3:18132512-18132531 MS.gene78960:CDS 35.0%
ATTAAGGACCCACATAATTC+TGG + chr5.3:18130553-18130572 None:intergenic 35.0%
ATTCTCCACCTTAGTTTCAT+TGG - chr5.3:18132377-18132396 MS.gene78960:CDS 35.0%
CATATAAGGGACCAAAGAAA+AGG - chr5.3:18132179-18132198 MS.gene78960:intron 35.0%
CCATCTTTCATAGTTGTCAA+AGG + chr5.3:18130329-18130348 None:intergenic 35.0%
CCATTACCAATCTTCTTCTA+AGG - chr5.3:18134040-18134059 MS.gene78960:CDS 35.0%
CCTAACTCAAAGGATTGATT+AGG - chr5.3:18131284-18131303 MS.gene78960:intron 35.0%
CCTTAGAAGAAGATTGGTAA+TGG + chr5.3:18134043-18134062 None:intergenic 35.0%
CCTTTGACAACTATGAAAGA+TGG - chr5.3:18130326-18130345 MS.gene78960:CDS 35.0%
CGACTCATATATTCTCTCAA+TGG - chr5.3:18133412-18133431 MS.gene78960:intron 35.0%
CTTCATGAAATAGATCATCC+GGG + chr5.3:18132308-18132327 None:intergenic 35.0%
GATTAAATATCGCACAGACT+CGG - chr5.3:18133450-18133469 MS.gene78960:CDS 35.0%
GCTTCATGAAATAGATCATC+CGG + chr5.3:18132309-18132328 None:intergenic 35.0%
GTAGGAAGAAACAGAAACTT+TGG + chr5.3:18132880-18132899 None:intergenic 35.0%
GTATGGTAGATAGCAAAATG+GGG - chr5.3:18131860-18131879 MS.gene78960:intron 35.0%
GTGGATTTCACTATTACTAG+TGG - chr5.3:18132531-18132550 MS.gene78960:CDS 35.0%
GTGTATGGTAGATAGCAAAA+TGG - chr5.3:18131858-18131877 MS.gene78960:intron 35.0%
TAAAATTAGGAGTGGTCCAA+TGG - chr5.3:18134856-18134875 MS.gene78960:intron 35.0%
TAAGTTCCTTTCATTGTGTC+AGG - chr5.3:18133124-18133143 MS.gene78960:CDS 35.0%
TAGTGAAAGCTGGAGAAAAA+TGG - chr5.3:18135117-18135136 MS.gene78960:intron 35.0%
TATACCTCTACCACTGTTAT+CGG + chr5.3:18133353-18133372 None:intergenic 35.0%
TCAATCTTGATAAACTGCAG+GGG - chr5.3:18131241-18131260 MS.gene78960:intron 35.0%
TCTAAGGGATCAATTAAGCA+AGG + chr5.3:18134151-18134170 None:intergenic 35.0%
TGACAATAATCTGTTGCACA+TGG - chr5.3:18133474-18133493 MS.gene78960:CDS 35.0%
TGCTGGAAATCTGAAAAATG+TGG - chr5.3:18131726-18131745 MS.gene78960:intron 35.0%
TGGGACTAGAAAATCATTCA+AGG - chr5.3:18131326-18131345 MS.gene78960:intron 35.0%
TGTATTCATTGAAAGCCATG+AGG - chr5.3:18135091-18135110 MS.gene78960:intron 35.0%
TTAAGGACCCACATAATTCT+GGG + chr5.3:18130552-18130571 None:intergenic 35.0%
TTGAATTAGCCAAAGATGCA+TGG - chr5.3:18131181-18131200 MS.gene78960:intron 35.0%
TTGCCTGTGAAGTTAATAAC+TGG - chr5.3:18135386-18135405 MS.gene78960:intron 35.0%
TTTAGCCAATGAAACTAAGG+TGG + chr5.3:18132385-18132404 None:intergenic 35.0%
TTTCATTGTGTCAGGAACAA+GGG - chr5.3:18133132-18133151 MS.gene78960:CDS 35.0%
TTTCTTTACTCAGAAACTCC+TGG - chr5.3:18131967-18131986 MS.gene78960:intron 35.0%
! CCTAATCAATCCTTTGAGTT+AGG + chr5.3:18131287-18131306 None:intergenic 35.0%
! CTGATGACGCATAATACAAA+CGG - chr5.3:18131892-18131911 MS.gene78960:intron 35.0%
! CTTCTTACCATCCTCATTTT+TGG + chr5.3:18135063-18135082 None:intergenic 35.0%
! GTTTTACCCAACCTTTTCTT+TGG + chr5.3:18132193-18132212 None:intergenic 35.0%
! TTGTTTGAAATCAATGCAGG+CGG - chr5.3:18135004-18135023 MS.gene78960:intron 35.0%
!! CTTTTAATTCATGACGTCAG+AGG + chr5.3:18133678-18133697 None:intergenic 35.0%
!! GGCTATTTTGTTAACTATCG+TGG - chr5.3:18131306-18131325 MS.gene78960:intron 35.0%
!! TACAATGTAACGGATCGATA+TGG - chr5.3:18131012-18131031 MS.gene78960:intron 35.0%
!! TTCTAAGGTGGTAGTTGATA+TGG + chr5.3:18134610-18134629 None:intergenic 35.0%
!!! GTATTTTGATCCAAGGAGAT+GGG + chr5.3:18135251-18135270 None:intergenic 35.0%
!!! TCTTTTTTGAACACTTCTCC+AGG + chr5.3:18131988-18132007 None:intergenic 35.0%
!!! TGTATTTTGATCCAAGGAGA+TGG + chr5.3:18135252-18135271 None:intergenic 35.0%
!!! TTTTGAGATGGATTCTAAGG+TGG + chr5.3:18134622-18134641 None:intergenic 35.0%
AAAAATTACCTGATGGGGCA+AGG - chr5.3:18130361-18130380 MS.gene78960:CDS 40.0%
AAACTACAAAGCTAGTGGTG+AGG - chr5.3:18133644-18133663 MS.gene78960:intron 40.0%
AAGGAAGCCAAAAATGAGGA+TGG - chr5.3:18135053-18135072 MS.gene78960:intron 40.0%
AAGGGACCAAAGAAAAGGTT+GGG - chr5.3:18132184-18132203 MS.gene78960:intron 40.0%
AATGTAACTGCAACTTCCTC+CGG - chr5.3:18131359-18131378 MS.gene78960:intron 40.0%
ACCTCTATTTGACAAGCTTC+AGG + chr5.3:18131078-18131097 None:intergenic 40.0%
AGCGTAAAATGCAACCATCA+TGG + chr5.3:18135441-18135460 None:intergenic 40.0%
AGGCCAGTTATTAACTTCAC+AGG + chr5.3:18135392-18135411 None:intergenic 40.0%
AGTCACTTGTCAGTGGTTTA+TGG - chr5.3:18131204-18131223 MS.gene78960:intron 40.0%
AGTGATGATAGATACCGCAT+TGG + chr5.3:18135294-18135313 None:intergenic 40.0%
AGTTATCTGCCGCTGATATA+AGG + chr5.3:18130667-18130686 None:intergenic 40.0%
CAAGGCCTTGAGAAAATCTA+TGG + chr5.3:18135369-18135388 None:intergenic 40.0%
CCTTGAGAAAATCTATGGCA+TGG + chr5.3:18135364-18135383 None:intergenic 40.0%
CCTTTACCCCAGAATTATGT+GGG - chr5.3:18130542-18130561 MS.gene78960:CDS 40.0%
CGCATTCATACACTATCTGT+TGG - chr5.3:18134824-18134843 MS.gene78960:intron 40.0%
CTAACCTTGCTCAATATCTG+TGG + chr5.3:18130494-18130513 None:intergenic 40.0%
CTATTTCATGAAGCCTCGTA+CGG - chr5.3:18132315-18132334 MS.gene78960:intron 40.0%
CTTGTTCCTGACACAATGAA+AGG + chr5.3:18133133-18133152 None:intergenic 40.0%
CTTTCATTGTGTCAGGAACA+AGG - chr5.3:18133131-18133150 MS.gene78960:CDS 40.0%
GAAAACTGGAACACTACCAA+GGG + chr5.3:18135531-18135550 None:intergenic 40.0%
GAAATACAAGACTGAAGTGG+CGG + chr5.3:18135318-18135337 None:intergenic 40.0%
GACAAGCTTCAGGAATACTT+TGG + chr5.3:18131068-18131087 None:intergenic 40.0%
GAGGTTACTCAAACTTTACC+CGG - chr5.3:18132287-18132306 MS.gene78960:intron 40.0%
GATGCTAGGAGAATGAAAAC+TGG + chr5.3:18135545-18135564 None:intergenic 40.0%
GCGCAAGAAACTCATAAGAT+AGG + chr5.3:18134742-18134761 None:intergenic 40.0%
GGAACAAACTACAAAGCTAG+TGG - chr5.3:18133639-18133658 MS.gene78960:intron 40.0%
GGAACACCTTAGAAGAAGAT+TGG + chr5.3:18134049-18134068 None:intergenic 40.0%
GGTGGAAACAATCAACAAAC+TGG - chr5.3:18135221-18135240 MS.gene78960:intron 40.0%
GTTATCTGCCGCTGATATAA+GGG + chr5.3:18130666-18130685 None:intergenic 40.0%
GTTTCCATTCCCCTTGTAAA+TGG - chr5.3:18132919-18132938 MS.gene78960:intron 40.0%
TAACAAAGCAAGACAGGCAT+GGG - chr5.3:18131782-18131801 MS.gene78960:intron 40.0%
TAAGGACCCACATAATTCTG+GGG + chr5.3:18130551-18130570 None:intergenic 40.0%
TAAGGGACCAAAGAAAAGGT+TGG - chr5.3:18132183-18132202 MS.gene78960:intron 40.0%
TCCTGAAGCTTGTCAAATAG+AGG - chr5.3:18131074-18131093 MS.gene78960:intron 40.0%
TCGGTGACTGAAAGTAGATA+AGG + chr5.3:18133334-18133353 None:intergenic 40.0%
TCTCTTTGTACTTGCATAGC+AGG + chr5.3:18133544-18133563 None:intergenic 40.0%
TGAAAACTGGAACACTACCA+AGG + chr5.3:18135532-18135551 None:intergenic 40.0%
TGATCATTGCCTTGTATCAG+CGG + chr5.3:18130838-18130857 None:intergenic 40.0%
TGCTCATTCCCTTATATCAG+CGG - chr5.3:18130655-18130674 MS.gene78960:CDS 40.0%
TGGAACAGACAGAGAAAAGA+AGG + chr5.3:18135421-18135440 None:intergenic 40.0%
TGTACCCCATGTGTCTAATA+GGG + chr5.3:18134766-18134785 None:intergenic 40.0%
TTAGTTCCTTCATCTATCCG+CGG - chr5.3:18133505-18133524 MS.gene78960:CDS 40.0%
TTGTACCCCATGTGTCTAAT+AGG + chr5.3:18134767-18134786 None:intergenic 40.0%
TTTCTCTGTCTGTTCCATGA+TGG - chr5.3:18135424-18135443 MS.gene78960:CDS 40.0%
TTTCTTGTAAATAGGACCGG+AGG + chr5.3:18131378-18131397 None:intergenic 40.0%
! ACAGTGGTAGAGGTATACTT+TGG - chr5.3:18133356-18133375 MS.gene78960:intron 40.0%
! ATATGCTAGATGTGGCTTTG+AGG - chr5.3:18132268-18132287 MS.gene78960:intron 40.0%
! CCATGCCATAGATTTTCTCA+AGG - chr5.3:18135361-18135380 MS.gene78960:intron 40.0%
! GTTTGTTGATTGTTTCCACC+CGG + chr5.3:18135221-18135240 None:intergenic 40.0%
! TGGAAATGTTGGTGAGAGAT+GGG - chr5.3:18131746-18131765 MS.gene78960:intron 40.0%
! TGTGGTTGATATGCTAGATG+TGG - chr5.3:18132260-18132279 MS.gene78960:intron 40.0%
! TTTGTTGATTGTTTCCACCC+GGG + chr5.3:18135220-18135239 None:intergenic 40.0%
!! ACAGAAACTTTGGAACCATG+AGG + chr5.3:18132870-18132889 None:intergenic 40.0%
!! ATGCACACTTGTTGACTTCA+TGG - chr5.3:18134544-18134563 MS.gene78960:intron 40.0%
!! CCACATAATTCTGGGGTAAA+GGG + chr5.3:18130544-18130563 None:intergenic 40.0%
!! TGAAGTATTTTGCAGGTTGG+AGG + chr5.3:18132443-18132462 None:intergenic 40.0%
!! TTAGATGGATTCTAAGGTGG+TGG + chr5.3:18134676-18134695 None:intergenic 40.0%
!! TTCTCTCAATGGATTGGAGA+AGG - chr5.3:18133423-18133442 MS.gene78960:intron 40.0%
!!! GCCGCTGACACTTTTAAAAT+TGG - chr5.3:18130718-18130737 MS.gene78960:CDS 40.0%
!!! TTTTTGGCTTCCTTGCACAT+CGG + chr5.3:18135047-18135066 None:intergenic 40.0%
AAAATCACACTGGCACTAGG+GGG - chr5.3:18135483-18135502 MS.gene78960:CDS 45.0%
AACAAAGCAAGACAGGCATG+GGG - chr5.3:18131783-18131802 MS.gene78960:intron 45.0%
AACACTACCAAGGGACAAGA+TGG + chr5.3:18135522-18135541 None:intergenic 45.0%
AATGTACTCTGCCTCACAAG+AGG - chr5.3:18134336-18134355 MS.gene78960:intron 45.0%
ACACTACCAAGGGACAAGAT+GGG + chr5.3:18135521-18135540 None:intergenic 45.0%
ACCTTGCTCAATATCTGTGG+TGG + chr5.3:18130491-18130510 None:intergenic 45.0%
AGAAGAGGGTCCTAACTCAA+AGG - chr5.3:18131274-18131293 MS.gene78960:intron 45.0%
AGCAAAATCACACTGGCACT+AGG - chr5.3:18135480-18135499 MS.gene78960:CDS 45.0%
AGGGGTTGTAGTTTGAGAAG+AGG - chr5.3:18131259-18131278 MS.gene78960:intron 45.0%
AGTTAACTGCCGCTGATACA+AGG - chr5.3:18130826-18130845 MS.gene78960:CDS 45.0%
ATACCTCGGCCTTGATACAT+CGG + chr5.3:18132038-18132057 None:intergenic 45.0%
ATCATGTGGACGACAGATTC+AGG - chr5.3:18131143-18131162 MS.gene78960:intron 45.0%
ATGAGAATGCACCAGTGTCA+CGG + chr5.3:18134393-18134412 None:intergenic 45.0%
ATGTTGTATGCTGCCCAGAA+TGG - chr5.3:18133271-18133290 MS.gene78960:intron 45.0%
ATTAGGAGTGGTCCAATGGA+CGG - chr5.3:18134860-18134879 MS.gene78960:intron 45.0%
ATTCTGGGCAGCATACAACA+TGG + chr5.3:18133272-18133291 None:intergenic 45.0%
CAAAATCACACTGGCACTAG+GGG - chr5.3:18135482-18135501 MS.gene78960:CDS 45.0%
CAACAACGAAGAACGAAAGG+AGG - chr5.3:18132344-18132363 MS.gene78960:intron 45.0%
CAAGTGACTCCATGCATCTT+TGG + chr5.3:18131193-18131212 None:intergenic 45.0%
CCCTTTACCCCAGAATTATG+TGG - chr5.3:18130541-18130560 MS.gene78960:CDS 45.0%
CTATTCAGGATGGTAGAGAG+AGG - chr5.3:18131613-18131632 MS.gene78960:intron 45.0%
CTGCTGCAAACATGACAGTA+AGG + chr5.3:18135187-18135206 None:intergenic 45.0%
CTGTGGGATGTTATCAGTAC+TGG - chr5.3:18130385-18130404 MS.gene78960:CDS 45.0%
CTTCACGTTGCAGTAAATGC+TGG - chr5.3:18131709-18131728 MS.gene78960:intron 45.0%
CTTTCAGTCACCGATAACAG+TGG - chr5.3:18133340-18133359 MS.gene78960:intron 45.0%
GCAAAATCACACTGGCACTA+GGG - chr5.3:18135481-18135500 MS.gene78960:CDS 45.0%
GCTACTTGACCGATGTATCA+AGG - chr5.3:18132026-18132045 MS.gene78960:intron 45.0%
GGGGTTGTAGTTTGAGAAGA+GGG - chr5.3:18131260-18131279 MS.gene78960:intron 45.0%
GTAAAATGTTGGTCAGCACC+TGG - chr5.3:18132841-18132860 MS.gene78960:CDS 45.0%
GTAACAAAGCAAGACAGGCA+TGG - chr5.3:18131781-18131800 MS.gene78960:intron 45.0%
GTGCAAGGAAGCCAAAAATG+AGG - chr5.3:18135049-18135068 MS.gene78960:intron 45.0%
TAGCGTCCTAGCTGAAATAG+AGG + chr5.3:18131689-18131708 None:intergenic 45.0%
TGACTTCATGGAGAGGTTGA+CGG - chr5.3:18134556-18134575 MS.gene78960:intron 45.0%
TGATTCTGCTGAGGCTTTCT+TGG - chr5.3:18130408-18130427 MS.gene78960:CDS 45.0%
TTAGACACATGGGGTACAAG+TGG - chr5.3:18134768-18134787 MS.gene78960:intron 45.0%
TTCTTAGAACACCGTGACAC+TGG - chr5.3:18134379-18134398 MS.gene78960:intron 45.0%
TTGTCAAAGGTGAGCACTTC+TGG + chr5.3:18130316-18130335 None:intergenic 45.0%
TTTACCGGCAGCCATATGAA+CGG + chr5.3:18131926-18131945 None:intergenic 45.0%
! AAAGTGTCAGCGGCAGTTAA+CGG + chr5.3:18130712-18130731 None:intergenic 45.0%
! CAAAGCACCAAGTTGCTCAT+GGG + chr5.3:18134206-18134225 None:intergenic 45.0%
! GTGGAAATGTTGGTGAGAGA+TGG - chr5.3:18131745-18131764 MS.gene78960:intron 45.0%
! TGAAGCGTATCTGAGATGCT+AGG + chr5.3:18135559-18135578 None:intergenic 45.0%
! TGTATCAAGGCCGAGGTATT+TGG - chr5.3:18132039-18132058 MS.gene78960:intron 45.0%
! TTTGAAATCAATGCAGGCGG+TGG - chr5.3:18135007-18135026 MS.gene78960:intron 45.0%
!! AGTGTCACGGTGTTCTAAGA+AGG + chr5.3:18134380-18134399 None:intergenic 45.0%
!! CACTTGTTGACTTCATGGAG+AGG - chr5.3:18134549-18134568 MS.gene78960:intron 45.0%
!! CCCACATAATTCTGGGGTAA+AGG + chr5.3:18130545-18130564 None:intergenic 45.0%
!! GAAACTTTGGAACCATGAGG+AGG + chr5.3:18132867-18132886 None:intergenic 45.0%
!! GTTGTTGATTTCACCGTACG+AGG + chr5.3:18132331-18132350 None:intergenic 45.0%
!! TCCAATGTGCTAGTCTTCGA+AGG - chr5.3:18134066-18134085 MS.gene78960:CDS 45.0%
!! TTCTGGAACTATTCCAACCG+AGG + chr5.3:18130299-18130318 None:intergenic 45.0%
!! ATTAAAAAATTAACAAATTA+AGG + chr5.3:18130569-18130588 None:intergenic 5.0%
AAATCACACTGGCACTAGGG+GGG - chr5.3:18135484-18135503 MS.gene78960:CDS 50.0%
AACTGGTACACCCATCTCCT+TGG - chr5.3:18135238-18135257 MS.gene78960:intron 50.0%
AATGGACGGAGAGACTGTAG+AGG - chr5.3:18134874-18134893 MS.gene78960:intron 50.0%
AGCGGCAGTTAACTGTCGTT+TGG + chr5.3:18130820-18130839 None:intergenic 50.0%
AGTTCTGCATCCGATGTGCA+AGG - chr5.3:18135034-18135053 MS.gene78960:intron 50.0%
CAGCTTTCACTAGCTCCTCA+TGG + chr5.3:18135109-18135128 None:intergenic 50.0%
CATGAGGAGCTAGTGAAAGC+TGG - chr5.3:18135107-18135126 MS.gene78960:intron 50.0%
CTCAGATACGCTTCATCTCG+AGG - chr5.3:18135564-18135583 MS.gene78960:CDS 50.0%
GCCACCACAGATATTGAGCA+AGG - chr5.3:18130487-18130506 MS.gene78960:CDS 50.0%
GCCTTCGAAGACTAGCACAT+TGG + chr5.3:18134070-18134089 None:intergenic 50.0%
GGAACTATTCCAACCGAGGA+GGG + chr5.3:18130295-18130314 None:intergenic 50.0%
GGTTGGAGGAATCGTCTGTT+TGG + chr5.3:18132429-18132448 None:intergenic 50.0%
GTCACCGATAACAGTGGTAG+AGG - chr5.3:18133346-18133365 MS.gene78960:intron 50.0%
GTTCATATGGCTGCCGGTAA+AGG - chr5.3:18131925-18131944 MS.gene78960:intron 50.0%
GTTTCCACCCGGGATAGTAA+AGG + chr5.3:18135210-18135229 None:intergenic 50.0%
TCTACAGTCTCTCCGTCCAT+TGG + chr5.3:18134875-18134894 None:intergenic 50.0%
TGCAGCAGCCTTTACTATCC+CGG - chr5.3:18135199-18135218 MS.gene78960:intron 50.0%
TGCATGGAGTCACTTGTCAG+TGG - chr5.3:18131197-18131216 MS.gene78960:intron 50.0%
TGGAACTATTCCAACCGAGG+AGG + chr5.3:18130296-18130315 None:intergenic 50.0%
TTACCGGCAGCCATATGAAC+GGG + chr5.3:18131925-18131944 None:intergenic 50.0%
! CAGAGAAAAGAAGGAGCGCA+AGG + chr5.3:18135412-18135431 None:intergenic 50.0%
! GCAAAGCACCAAGTTGCTCA+TGG + chr5.3:18134207-18134226 None:intergenic 50.0%
!! CAGTACTGGTGATTCTGCTG+AGG - chr5.3:18130399-18130418 MS.gene78960:CDS 50.0%
AACCGAGGAGGGAACACTTG+TGG + chr5.3:18130284-18130303 None:intergenic 55.0%
ACAAGTGTTCCCTCCTCGGT+TGG - chr5.3:18130283-18130302 MS.gene78960:CDS 55.0%
AGCACCAAGTTGCTCATGGG+CGG + chr5.3:18134203-18134222 None:intergenic 55.0%
AGCCACAAGTGTTCCCTCCT+CGG - chr5.3:18130279-18130298 MS.gene78960:CDS 55.0%
AGCGGCAGATAACTGTCGCT+CGG - chr5.3:18130673-18130692 MS.gene78960:CDS 55.0%
ATCTATCCGCGGTGGCAGAT+GGG - chr5.3:18133516-18133535 MS.gene78960:CDS 55.0%
CGCGCCCTATTAGACACATG+GGG - chr5.3:18134759-18134778 MS.gene78960:intron 55.0%
CGGAGAACTCCCCGTTCATA+TGG - chr5.3:18131912-18131931 MS.gene78960:intron 55.0%
CTAGGACCCATCTTGTCCCT+TGG - chr5.3:18135512-18135531 MS.gene78960:CDS 55.0%
GAAATCAATGCAGGCGGTGG+AGG - chr5.3:18135010-18135029 MS.gene78960:intron 55.0%
GCAGCAGCCTTTACTATCCC+GGG - chr5.3:18135200-18135219 MS.gene78960:intron 55.0%
GCGCGCCCTATTAGACACAT+GGG - chr5.3:18134758-18134777 MS.gene78960:intron 55.0%
GTTCCTTCATCTATCCGCGG+TGG - chr5.3:18133508-18133527 MS.gene78960:CDS 55.0%
TACCGGCAGCCATATGAACG+GGG + chr5.3:18131924-18131943 None:intergenic 55.0%
TGACCGATGTATCAAGGCCG+AGG - chr5.3:18132032-18132051 MS.gene78960:intron 55.0%
TGCGCGCCCTATTAGACACA+TGG - chr5.3:18134757-18134776 MS.gene78960:intron 55.0%
! TTTGGAACCATGAGGAGGCC+AGG + chr5.3:18132862-18132881 None:intergenic 55.0%
ACCTGATGGGGCAAGGTCTG+TGG - chr5.3:18130368-18130387 MS.gene78960:CDS 60.0%
CAGGCATGGGGATACAGCTC+TGG - chr5.3:18131795-18131814 MS.gene78960:intron 60.0%
CATCTATCCGCGGTGGCAGA+TGG - chr5.3:18133515-18133534 MS.gene78960:CDS 60.0%
CCTGATGGGGCAAGGTCTGT+GGG - chr5.3:18130369-18130388 MS.gene78960:CDS 60.0%
CTCCCCGTTCATATGGCTGC+CGG - chr5.3:18131919-18131938 MS.gene78960:intron 60.0%
CTGCCACCGCGGATAGATGA+AGG + chr5.3:18133514-18133533 None:intergenic 60.0%
GCAGCCTTTACTATCCCGGG+TGG - chr5.3:18135203-18135222 MS.gene78960:intron 60.0%
GGCACTAGGGGGGTTGTTCT+AGG - chr5.3:18135494-18135513 MS.gene78960:CDS 60.0%
TCTATCCGCGGTGGCAGATG+GGG - chr5.3:18133517-18133536 MS.gene78960:CDS 60.0%
TGCTCCGCCCATGAGCAACT+TGG - chr5.3:18134196-18134215 MS.gene78960:CDS 60.0%
CCCACAGACCTTGCCCCATC+AGG + chr5.3:18130372-18130391 None:intergenic 65.0%
GTCAGCACCTGGCCTCCTCA+TGG - chr5.3:18132852-18132871 MS.gene78960:CDS 65.0%
CAGGACCCCATCTGCCACCG+CGG + chr5.3:18133525-18133544 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 18130274 18135625 18130274 ID=MS.gene78960
chr5.3 mRNA 18130274 18135625 18130274 ID=MS.gene78960.t1;Parent=MS.gene78960
chr5.3 exon 18135391 18135625 18135391 ID=MS.gene78960.t1.exon1;Parent=MS.gene78960.t1
chr5.3 CDS 18135391 18135625 18135391 ID=cds.MS.gene78960.t1;Parent=MS.gene78960.t1
chr5.3 exon 18133839 18134321 18133839 ID=MS.gene78960.t1.exon2;Parent=MS.gene78960.t1
chr5.3 CDS 18133839 18134321 18133839 ID=cds.MS.gene78960.t1;Parent=MS.gene78960.t1
chr5.3 exon 18133428 18133622 18133428 ID=MS.gene78960.t1.exon3;Parent=MS.gene78960.t1
chr5.3 CDS 18133428 18133622 18133428 ID=cds.MS.gene78960.t1;Parent=MS.gene78960.t1
chr5.3 exon 18132989 18133168 18132989 ID=MS.gene78960.t1.exon4;Parent=MS.gene78960.t1
chr5.3 CDS 18132989 18133168 18132989 ID=cds.MS.gene78960.t1;Parent=MS.gene78960.t1
chr5.3 exon 18132830 18132892 18132830 ID=MS.gene78960.t1.exon5;Parent=MS.gene78960.t1
chr5.3 CDS 18132830 18132892 18132830 ID=cds.MS.gene78960.t1;Parent=MS.gene78960.t1
chr5.3 exon 18132347 18132753 18132347 ID=MS.gene78960.t1.exon6;Parent=MS.gene78960.t1
chr5.3 CDS 18132347 18132753 18132347 ID=cds.MS.gene78960.t1;Parent=MS.gene78960.t1
chr5.3 exon 18130274 18130876 18130274 ID=MS.gene78960.t1.exon7;Parent=MS.gene78960.t1
chr5.3 CDS 18130274 18130876 18130274 ID=cds.MS.gene78960.t1;Parent=MS.gene78960.t1
Gene Sequence

>MS.gene78960

ATGAAAGCCACAAGTGTTCCCTCCTCGGTTGGAATAGTTCCAGAAGTGCTCACCTTTGACAACTATGAAAGATGGAGTGTTCTTATGAAAAATTACCTGATGGGGCAAGGTCTGTGGGATGTTATCAGTACTGGTGATTCTGCTGAGGCTTTCTTGGAAGAGAATTCTGAAATATGGAAGCATTTGAGCAACAAAAAAGGCAAAAAGTTTGAAGCCACCACAGATATTGAGCAAGGTTAGTATATAGTCTACTCTAAAAGTGATAAACCCTTTACCCCAGAATTATGTGGGTCCTTAATTTGTTAATTTTTTAATACCGTCCTTGTTTTTTTTAGGGAAGTGTCCTTAAATTATTCAAAAATTAGTTCTCGCTTATGAAATTGCTCATTCCCTTATATCAGCGGCAGATAACTGTCGCTCGGCATTTTTCAGTGACCGTTAACTGCCGCTGACACTTTTAAAATTGGTCGAACCGACTTAAAAAAATAATTGAATCGAAATATCTTGAAAATGTCAGCATCAGTTAACTGCTGCTGAAAATTACCAAACGACAGTTAACTGCCGCTGATACAAGGCAATGATCAATATTAAAAAGGAGAACCACTTAAAAAGGGTTAAAAAGTGTAAAAAAATATTCTAGATTTTAAGTCCGTTCTTTGATCCCATTTAATAAACATAATTTAGATCCGTTCAACCCATTTAAATTCTCTTTTGATTAAGTCTGTAATATCTTTTGATTACAATGTAACGGATCGATATGGTAAATATTTCAAAGGACTCGTCGACGCTCACCAAAGTATTCCTGAAGCTTGTCAAATAGAGGTTTTATTTAAGATGAAGAATGCAAACGCTCTGCATATTATTCAACTATCATGTGGACGACAGATTCAGGATGAGCTTTGTCATTTTGAATTAGCCAAAGATGCATGGAGTCACTTGTCAGTGGTTTATGGCAAAACTTTAAAAATCAATCTTGATAAACTGCAGGGGTTGTAGTTTGAGAAGAGGGTCCTAACTCAAAGGATTGATTAGGGCTATTTTGTTAACTATCGTGGGACTAGAAAATCATTCAAGGTGTGTATTTAAATGTAACTGCAACTTCCTCCGGTCCTATTTACAAGAAACTAATTTTAGATTCATTTTTTAATTGTTGTATCTAGTATGTAATATAGACCAGATACATCAACTATTCAATAAATATAAAAAGTCGATTGTTTCTTATAAATAGGATCAGACGGAGTATAATACTGCGAGTTGTATTGATTTTCCCTCCAAGATAATATTTATGCATGTTTAAATGGCAGATGATGATGATATAGTTAGTGTGAAACATAAAGATCTATTCAGGATGGTAGAGAGAGGTGATCCTATTGAAGATATCAAAATAGATCAGGATGTATATGATGATATAACCTCTATTTCAGCTAGGACGCTACTTCACGTTGCAGTAAATGCTGGAAATCTGAAAAATGTGGAAATGTTGGTGAGAGATGGGAGAGATGAGTTTGTAACAAAGCAAGACAGGCATGGGGATACAGCTCTGGCTCTTGCAGCTTATTATAATGCAAAAATAGATATAGTGAAGTGTATGGTAGATAGCAAAATGGGGCAGATGTTGCTGATGACGCATAATACAAACGGAGAACTCCCCGTTCATATGGCTGCCGGTAAAGGACACAAAAAAATGACTAGTTTTCTTTACTCAGAAACTCCTGGAGAAGTGTTCAAAAAAGATTCACGATATCGAGTTTTGCTACTTGACCGATGTATCAAGGCCGAGGTATTTGGTAAGCGAATTTAATAGTTCCAATTACAAGGATATGAAGTCATTTAAATAATAAATGAACTTTAAAATTATTTTTCTTCTTCTTATATTTAGAAAAAAATGATTTCCAAAACATTTCTCATATAAGGGACCAAAGAAAAGGTTGGGTAAAACAATCTTAAATAAACAAGCAATAGAAGAATATATAGATTGAATTTATGTGTGGTTGATATGCTAGATGTGGCTTTGAGGTTACTCAAACTTTACCCGGATGATCTATTTCATGAAGCCTCGTACGGTGAAATCAACAACGAAGAACGAAAGGAGGAATCCAACAAATTCTCCACCTTAGTTTCATTGGCTAAATTTAAATTGCACCCTAATTTTCCAAACAGACGATTCCTCCAACCTGCAAAATACTTCATTTATAATCGTAAGTTTCCAAGATTTGCCTTTTATGTATGAAGCATCTAATATGGACCCGATTTAAAAGTGGATTTCACTATTACTAGTGGATTTTAATAAACTACTATATATATTTTTCTTCATTTTTTTTTAATATAAAACTATTTTTCACTAAAATTGATATGGTTTAACCTTTGAATTATATTTTGAGAGGTTCTTGTTAGAAACACAATTTATGTGTATCACACAATAATTCATCTGTTCCTAAAACAATTTTATTATTACAGATTTAAGCCTAAAACAATTTGAAGACAACTATGGGATTCCCGAATCCGAAATTTTAGAGTATATACGATTGATTTATGTCGATAGAAGTGTACATGCGACATCATCTTCTGTAAAATGTTGGTCAGCACCTGGCCTCCTCATGGTTCCAAAGTTTCTGTTTCTTCCTACAAAACTACTTGGTATGTTTGTTTCCATTCCCCTTGTAAATGGATTTGTTTATTTCATTTTTCATTATTTGTATTTATTTTTACTGGATGATTTGTTGATTTGTTCAGATCGACTACTTCATAAATTTGCATACTTGTTGGTCCAAGTTTTCAAGTATCTAGATATCTTTGGTAAGCAATATTACTCTCATTTAATTTGATTTTCGGCAATGAGTCATGTACTTATAAGTTCCTTTCATTGTGTCAGGAACAAGGGAAATATATGCAAGAAAATATACCTTATATGAAGTTGTGGGAATATTGAAATACTTGATCCAAAATCTTAAAGGATTTAATGGTATAGGGCTCAGACAAGCTTCAGCACATGAAGCCATGTTGTATGCTGCCCAGAATGGAATGATTACATTCATAAATGCTATGAGGAATGCTAATCCTTATCTACTTTCAGTCACCGATAACAGTGGTAGAGGTATACTTTGGTATGCAATTCTGAAACGCAGAAGATATGTTTTCCGACTCATATATTCTCTCAATGGATTGGAGAAGGAGATGATTAAATATCGCACAGACTCGGTTGACAATAATCTGTTGCACATGGCAGCACTTTTAGTTCCTTCATCTATCCGCGGTGGCAGATGGGGTCCTGCTATGCAAGTACAAAGAGAAATTCAATGGTTTAAGGCCATTTCTCTCATCTCTATCTATGATCTATCTATCTGTCTATCTATCTATCTATAACGGGAACAAACTACAAAGCTAGTGGTGAGGTACAAACACCTCTGACGTCATGAATTAAAAGTAGATCAAGCAAAAGAAATATTGAATTGACAGAATAATTAACAGGTTTAGAACAATACTCTTGTATGAAAGTGATTTGGTGAAGAAAGAAAGTAATGAGAACTTTGGAGATTAGGAGAGAATGAAGATGATAAGAAATCCAATTTTTTATTGAATAATCGATCACATATTGATTTTTATGCGATTAGGGACTATTTATGAAACATGGGAATCAACAACTAACTAAAACTAAGTTGTAACTTGTAGCTTAAGTTACCTAACTAATATTTAGTTATTCAACTAGCAACCTTACTAACTTTGAATTATATCAACTAAAATCCTCAAATCAAGTTAGTCGTAAATACCATTACCAATCTTCTTCTAAGGTGTTCCAATGTGCTAGTCTTCGAAGGCTTTGTTAGCAAATCTGCAAGTTTTAAATCTGTCTTGCAATATTGCAGCTCCGATTTCTCCTTGCTTAATTGATCCCTTAGAAAATGAAACTTTGTTTCAATCTGTTTGCTCCGCCCATGAGCAACTTGGTGCTTTGCAAGATCAATTGATGACTTGCTATCTACTAGCAATATAAAGTCATCTTCTCAGCTTCCTTCAAGTTCATCTCTTCCATTAGAATGCTTAACATGCAATTATTGAAGTTGCAATGTACTCTGCCTCACAAGAGGATATAGTTATTACTATTTCCTTCTTAGAACACCGTGACACTGGTGCATTCTCATACATCACATATGCACATTCCTTTTCCTATCGTTTAAACTAACAACCTAACTAACTTTAAATTATACCAGCTAATACAAATATATAGTAATCACATTCAAAGGGGTAGAGACACCCTTATTAGCTAGTAAATATGCACACTTGTTGACTTCATGGAGAGGTTGACGGAAACGTATATGAGTTTTTTTAGAATTCACCATATCAACTACCACCTTAGAATCCATCTCAAAAATGATCTTAGAAAGTGATAATTCTTGAGCAACCACCACCTTAGAATCCATCTAAAAAAACGACATAAGAACGTGATAATTATTGGACTATTACTTTTCCTATCTTATGAGTTTCTTGCGCGCCCTATTAGACACATGGGGTACAAGTGGCAATAACACACGACAATTAAATGGTGGGAAGTACGCATTCATACACTATCTGTTGGAACAATATTTAAAATTAGGAGTGGTCCAATGGACGGAGAGACTGTAGAGGTTTTCAAGAAACATCATTATTTAAGATATTAGATTGCTTTATTGACACTTGCCAAAAATATTTTTACAAGTGTTTTCTAATGTATAATATTAAGATGAAGATTAAGATTGTTTGAAATCAATGCAGGCGGTGGAGGAAGTTCTGCATCCGATGTGCAAGGAAGCCAAAAATGAGGATGGTAAGAAGCCTTATGATGTATTCATTGAAAGCCATGAGGAGCTAGTGAAAGCTGGAGAAAAATGGACAAAAGACACAGCTAGTTGTTATATAGCTGTGGCTTCTCTCGTCCTTACTGTCATGTTTGCAGCAGCCTTTACTATCCCGGGTGGAAACAATCAACAAACTGGTACACCCATCTCCTTGGATCAAAATACATTTAAAATGTTTCTCTTAGCCAATGCGGTATCTATCATCACTTCCGCCACTTCAGTCTTGTATTTCATTTCGATTCTCACATCGAGTTGCCATGCCATAGATTTTCTCAAGGCCTTGCCTGTGAAGTTAATAACTGGCCTTGCGCTCCTTCTTTTCTCTGTCTGTTCCATGATGGTTGCATTTTACGCTGCGCTTAATATGATCTTAAAGCAAAATCACACTGGCACTAGGGGGGTTGTTCTAGGACCCATCTTGTCCCTTGGTAGTGTTCCAGTTTTCATTCTCCTAGCATCTCAGATACGCTTCATCTCGAGGATTTTATATTCTACAATGAAAAATCGCATTAAGGGATGA
Protein sequence

>MS.gene78960.t1

MKATSVPSSVGIVPEVLTFDNYERWSVLMKNYLMGQGLWDVISTGDSAEAFLEENSEIWKHLSNKKGKKFEATTDIEQDDDDIVSVKHKDLFRMVERGDPIEDIKIDQDVYDDITSISARTLLHVAVNAGNLKNVEMLVRDGRDEFVTKQDRHGDTALALAAYYNAKIDIVKCMVDSKMGQMLLMTHNTNGELPVHMAAGKGHKKMTSFLYSETPGEVFKKDSRYRVLLLDRCIKAEVFDVALRLLKLYPDDLFHEASYGEINNEERKEESNKFSTLVSLAKFKLHPNFPNRRFLQPAKYFIYNHLSLKQFEDNYGIPESEILEYIRLIYVDRSVHATSSSVKCWSAPGLLMVPKFLFLPTKLLDRLLHKFAYLLVQVFKYLDIFGTREIYARKYTLYEVVGILKYLIQNLKGFNGIGLRQASAHEAMLYAAQNGMITFINAMRNANPYLLSVTDNSGRGILWYAILKRRRYVFRLIYSLNGLEKEMIKYRTDSVDNNLLHMAALLVPSSIRGGRWGPAMQAVEEVLHPMCKEAKNEDGKKPYDVFIESHEELVKAGEKWTKDTASCYIAVASLVLTVMFAAAFTIPGGNNQQTGTPISLDQNTFKMFLLANAVSIITSATSVLYFISILTSSCHAIDFLKALPVKLITGLALLLFSVCSMMVAFYAALNMILKQNHTGTRGVVLGPILSLGSVPVFILLASQIRFISRILYSTMKNRIKG