Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79332.t1 | RHN65976.1 | 55.9 | 320 | 23 | 2 | 1 | 202 | 1 | 320 | 2.40E-76 | 295.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79332.t1 | Q9LRR4 | 35.3 | 153 | 85 | 4 | 1 | 144 | 4 | 151 | 3.0e-11 | 70.9 |
| MS.gene79332.t1 | Q9LRR4 | 52.2 | 46 | 22 | 0 | 157 | 202 | 275 | 320 | 3.8e-06 | 53.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79332.t1 | G7J1M7 | 55.9 | 320 | 23 | 2 | 1 | 202 | 1 | 320 | 1.7e-76 | 295.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050750 | MS.gene79332 | 0.806953 | 6.40E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene79332 | 0.823965 | 1.04E-53 | -1.69E-46 |
| MS.gene05414 | MS.gene79332 | 0.800857 | 1.18E-48 | -1.69E-46 |
| MS.gene05415 | MS.gene79332 | 0.844907 | 5.65E-59 | -1.69E-46 |
| MS.gene054559 | MS.gene79332 | 0.810506 | 1.11E-50 | -1.69E-46 |
| MS.gene060373 | MS.gene79332 | 0.803769 | 2.98E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79332.t1 | MTR_0425s0020 | 87.582 | 153 | 19 | 0 | 1 | 153 | 1 | 153 | 2.00e-79 | 263 |
| MS.gene79332.t1 | MTR_0425s0020 | 85.714 | 49 | 7 | 0 | 154 | 202 | 270 | 318 | 6.41e-20 | 90.9 |
| MS.gene79332.t1 | MTR_3g022300 | 86.928 | 153 | 20 | 0 | 1 | 153 | 1 | 153 | 6.83e-79 | 261 |
| MS.gene79332.t1 | MTR_3g022300 | 83.333 | 48 | 8 | 0 | 155 | 202 | 271 | 318 | 4.67e-18 | 85.5 |
| MS.gene79332.t1 | MTR_3g022600 | 87.582 | 153 | 19 | 0 | 1 | 153 | 1 | 153 | 8.68e-79 | 261 |
| MS.gene79332.t1 | MTR_3g022600 | 85.714 | 49 | 7 | 0 | 154 | 202 | 270 | 318 | 7.31e-20 | 90.9 |
| MS.gene79332.t1 | MTR_3g027200 | 84.314 | 153 | 24 | 0 | 1 | 153 | 1 | 153 | 1.97e-78 | 259 |
| MS.gene79332.t1 | MTR_3g027200 | 78.000 | 50 | 11 | 0 | 154 | 203 | 270 | 319 | 6.15e-18 | 85.1 |
| MS.gene79332.t1 | MTR_3g022230 | 80.392 | 153 | 30 | 0 | 1 | 153 | 1 | 153 | 9.00e-72 | 241 |
| MS.gene79332.t1 | MTR_3g022230 | 74.468 | 47 | 12 | 0 | 158 | 204 | 274 | 320 | 3.12e-15 | 77.0 |
| MS.gene79332.t1 | MTR_3g023030 | 87.742 | 155 | 17 | 1 | 1 | 153 | 1 | 155 | 2.78e-70 | 236 |
| MS.gene79332.t1 | MTR_3g023030 | 87.755 | 49 | 6 | 0 | 154 | 202 | 272 | 320 | 1.08e-21 | 96.3 |
| MS.gene79332.t1 | MTR_3g023030 | 87.742 | 155 | 17 | 1 | 1 | 153 | 1 | 155 | 3.28e-70 | 236 |
| MS.gene79332.t1 | MTR_3g023030 | 87.755 | 49 | 6 | 0 | 154 | 202 | 272 | 320 | 1.10e-21 | 96.3 |
| MS.gene79332.t1 | MTR_3g022130 | 74.510 | 153 | 13 | 1 | 1 | 153 | 1 | 127 | 2.58e-62 | 214 |
| MS.gene79332.t1 | MTR_3g022130 | 85.714 | 49 | 7 | 0 | 154 | 202 | 244 | 292 | 4.92e-20 | 91.3 |
| MS.gene79332.t1 | MTR_3g018980 | 61.438 | 153 | 57 | 2 | 1 | 152 | 1 | 152 | 2.65e-51 | 182 |
| MS.gene79332.t1 | MTR_3g018980 | 71.739 | 46 | 13 | 0 | 157 | 202 | 273 | 318 | 6.56e-15 | 75.9 |
| MS.gene79332.t1 | MTR_3g018930 | 62.745 | 153 | 55 | 2 | 1 | 152 | 3 | 154 | 3.05e-51 | 181 |
| MS.gene79332.t1 | MTR_3g018930 | 78.723 | 47 | 10 | 0 | 156 | 202 | 274 | 320 | 8.73e-18 | 84.3 |
| MS.gene79332.t1 | MTR_3g018980 | 61.438 | 153 | 57 | 2 | 1 | 152 | 1 | 152 | 4.09e-51 | 181 |
| MS.gene79332.t1 | MTR_3g018980 | 71.739 | 46 | 13 | 0 | 157 | 202 | 273 | 318 | 7.68e-15 | 75.9 |
| MS.gene79332.t1 | MTR_3g018930 | 62.745 | 153 | 55 | 2 | 1 | 152 | 3 | 154 | 1.27e-50 | 180 |
| MS.gene79332.t1 | MTR_3g018930 | 78.723 | 47 | 10 | 0 | 156 | 202 | 274 | 320 | 1.43e-17 | 84.0 |
| MS.gene79332.t1 | MTR_3g019040 | 63.399 | 153 | 54 | 2 | 1 | 152 | 1 | 152 | 1.90e-50 | 179 |
| MS.gene79332.t1 | MTR_3g019040 | 82.609 | 46 | 8 | 0 | 157 | 202 | 273 | 318 | 1.48e-18 | 87.0 |
| MS.gene79332.t1 | MTR_3g019000 | 57.792 | 154 | 53 | 3 | 1 | 153 | 1 | 143 | 4.02e-43 | 158 |
| MS.gene79332.t1 | MTR_3g019000 | 63.636 | 55 | 20 | 0 | 156 | 210 | 263 | 317 | 5.96e-16 | 79.0 |
| MS.gene79332.t1 | MTR_3g015260 | 60.131 | 153 | 57 | 3 | 1 | 152 | 3 | 152 | 1.32e-42 | 157 |
| MS.gene79332.t1 | MTR_3g015260 | 76.471 | 51 | 10 | 1 | 154 | 202 | 270 | 320 | 5.98e-16 | 79.0 |
| MS.gene79332.t1 | MTR_3g015260 | 60.131 | 153 | 57 | 3 | 1 | 152 | 3 | 152 | 1.64e-42 | 157 |
| MS.gene79332.t1 | MTR_3g015260 | 76.471 | 51 | 10 | 1 | 154 | 202 | 270 | 320 | 6.36e-16 | 79.0 |
| MS.gene79332.t1 | MTR_7g021000 | 49.673 | 153 | 61 | 5 | 1 | 152 | 1 | 138 | 2.88e-33 | 130 |
| MS.gene79332.t1 | MTR_7g021000 | 72.340 | 47 | 13 | 0 | 156 | 202 | 258 | 304 | 1.11e-14 | 75.1 |
| MS.gene79332.t1 | MTR_7g021000 | 49.673 | 153 | 61 | 5 | 1 | 152 | 1 | 138 | 3.10e-33 | 129 |
| MS.gene79332.t1 | MTR_7g021000 | 72.340 | 47 | 13 | 0 | 156 | 202 | 258 | 304 | 1.04e-14 | 75.1 |
| MS.gene79332.t1 | MTR_3g022790 | 50.658 | 152 | 66 | 4 | 1 | 152 | 1 | 143 | 2.55e-32 | 127 |
| MS.gene79332.t1 | MTR_3g022790 | 45.361 | 97 | 35 | 3 | 106 | 202 | 231 | 309 | 1.00e-12 | 69.3 |
| MS.gene79332.t1 | MTR_3g027470 | 93.548 | 62 | 4 | 0 | 92 | 153 | 1 | 62 | 3.04e-29 | 118 |
| MS.gene79332.t1 | MTR_3g027470 | 95.918 | 49 | 2 | 0 | 154 | 202 | 179 | 227 | 4.65e-25 | 105 |
| MS.gene79332.t1 | MTR_3g027420 | 46.875 | 160 | 70 | 3 | 1 | 160 | 1 | 145 | 3.32e-29 | 118 |
| MS.gene79332.t1 | MTR_3g027420 | 85.417 | 48 | 7 | 0 | 155 | 202 | 255 | 302 | 3.48e-19 | 88.6 |
| MS.gene79332.t1 | MTR_3g027250 | 46.711 | 152 | 66 | 3 | 1 | 152 | 1 | 137 | 8.29e-28 | 114 |
| MS.gene79332.t1 | MTR_3g027250 | 72.917 | 48 | 13 | 0 | 155 | 202 | 256 | 303 | 1.23e-14 | 75.1 |
| MS.gene79332.t1 | MTR_3g025360 | 46.000 | 150 | 64 | 4 | 1 | 147 | 1 | 136 | 6.25e-26 | 108 |
| MS.gene79332.t1 | MTR_3g025360 | 65.957 | 47 | 16 | 0 | 156 | 202 | 281 | 327 | 2.89e-11 | 64.7 |
| MS.gene79332.t1 | MTR_3g022400 | 44.828 | 145 | 66 | 3 | 1 | 145 | 1 | 131 | 7.03e-26 | 108 |
| MS.gene79332.t1 | MTR_3g022400 | 72.917 | 48 | 13 | 0 | 155 | 202 | 248 | 295 | 1.92e-15 | 77.4 |
| MS.gene79332.t1 | MTR_3g022400 | 44.828 | 145 | 66 | 3 | 1 | 145 | 1 | 131 | 7.14e-26 | 108 |
| MS.gene79332.t1 | MTR_3g022400 | 72.917 | 48 | 13 | 0 | 155 | 202 | 248 | 295 | 2.16e-15 | 77.4 |
| MS.gene79332.t1 | MTR_3g022940 | 44.604 | 139 | 63 | 3 | 4 | 142 | 1 | 125 | 6.29e-25 | 105 |
| MS.gene79332.t1 | MTR_3g021100 | 44.755 | 143 | 63 | 4 | 1 | 142 | 1 | 128 | 1.16e-23 | 102 |
| MS.gene79332.t1 | MTR_3g021170 | 41.176 | 153 | 75 | 4 | 1 | 152 | 1 | 139 | 1.98e-23 | 101 |
| MS.gene79332.t1 | MTR_3g022060 | 57.732 | 97 | 34 | 2 | 154 | 243 | 205 | 301 | 5.96e-22 | 97.1 |
| MS.gene79332.t1 | MTR_8g038570 | 37.736 | 159 | 93 | 3 | 2 | 155 | 3 | 160 | 1.08e-21 | 96.3 |
| MS.gene79332.t1 | MTR_3g021380 | 43.885 | 139 | 64 | 3 | 6 | 144 | 10 | 134 | 1.77e-21 | 95.5 |
| MS.gene79332.t1 | MTR_3g021340 | 44.828 | 145 | 65 | 4 | 1 | 144 | 1 | 131 | 1.77e-21 | 95.5 |
| MS.gene79332.t1 | MTR_8g038590 | 36.774 | 155 | 94 | 2 | 2 | 152 | 3 | 157 | 9.46e-21 | 93.6 |
| MS.gene79332.t1 | MTR_6g084550 | 36.242 | 149 | 86 | 3 | 2 | 142 | 3 | 150 | 1.77e-20 | 92.4 |
| MS.gene79332.t1 | MTR_3g030980 | 36.735 | 147 | 86 | 4 | 2 | 142 | 3 | 148 | 1.15e-19 | 90.1 |
| MS.gene79332.t1 | MTR_3g030960 | 36.735 | 147 | 86 | 4 | 2 | 142 | 3 | 148 | 1.16e-19 | 90.1 |
| MS.gene79332.t1 | MTR_3g022920 | 39.073 | 151 | 66 | 2 | 1 | 151 | 1 | 125 | 1.22e-19 | 90.1 |
| MS.gene79332.t1 | MTR_3g035810 | 41.958 | 143 | 67 | 4 | 1 | 142 | 1 | 128 | 1.73e-19 | 89.7 |
| MS.gene79332.t1 | MTR_3g032960 | 36.735 | 147 | 86 | 4 | 2 | 142 | 3 | 148 | 2.67e-19 | 89.0 |
| MS.gene79332.t1 | MTR_3g032110 | 34.694 | 147 | 89 | 4 | 2 | 142 | 3 | 148 | 1.12e-18 | 87.4 |
| MS.gene79332.t1 | MTR_3g014360 | 38.514 | 148 | 83 | 4 | 1 | 142 | 1 | 146 | 3.96e-18 | 85.5 |
| MS.gene79332.t1 | MTR_3g014530 | 39.231 | 130 | 75 | 3 | 4 | 130 | 1 | 129 | 4.87e-18 | 80.1 |
| MS.gene79332.t1 | MTR_3g032200 | 34.899 | 149 | 89 | 3 | 2 | 142 | 3 | 151 | 7.41e-18 | 84.7 |
| MS.gene79332.t1 | MTR_3g032800 | 35.374 | 147 | 88 | 4 | 2 | 142 | 3 | 148 | 8.17e-18 | 84.7 |
| MS.gene79332.t1 | MTR_3g033380 | 34.899 | 149 | 89 | 3 | 2 | 142 | 3 | 151 | 8.84e-18 | 84.7 |
| MS.gene79332.t1 | MTR_3g435720 | 34.247 | 146 | 91 | 3 | 2 | 142 | 3 | 148 | 1.02e-17 | 84.3 |
| MS.gene79332.t1 | MTR_3g032500 | 34.899 | 149 | 89 | 3 | 2 | 142 | 3 | 151 | 1.38e-17 | 84.0 |
| MS.gene79332.t1 | MTR_3g035960 | 34.932 | 146 | 90 | 3 | 2 | 142 | 3 | 148 | 1.76e-17 | 83.6 |
| MS.gene79332.t1 | MTR_0003s0170 | 32.639 | 144 | 90 | 3 | 7 | 145 | 6 | 147 | 2.53e-17 | 80.9 |
| MS.gene79332.t1 | MTR_3g035840 | 34.667 | 150 | 85 | 5 | 2 | 142 | 3 | 148 | 1.29e-16 | 80.5 |
| MS.gene79332.t1 | MTR_3g021400 | 40.580 | 138 | 68 | 3 | 8 | 145 | 2 | 125 | 1.37e-16 | 80.9 |
| MS.gene79332.t1 | MTR_3g031940 | 32.886 | 149 | 92 | 3 | 2 | 142 | 3 | 151 | 1.53e-16 | 80.9 |
| MS.gene79332.t1 | MTR_3g028040 | 33.562 | 146 | 92 | 2 | 2 | 142 | 3 | 148 | 2.14e-16 | 80.5 |
| MS.gene79332.t1 | MTR_3g022570 | 50.549 | 91 | 38 | 3 | 1 | 90 | 1 | 85 | 2.69e-16 | 80.1 |
| MS.gene79332.t1 | MTR_3g022570 | 59.649 | 57 | 23 | 0 | 154 | 210 | 292 | 348 | 6.13e-12 | 67.0 |
| MS.gene79332.t1 | MTR_1g037730 | 38.158 | 152 | 84 | 3 | 2 | 145 | 3 | 152 | 3.80e-16 | 78.6 |
| MS.gene79332.t1 | MTR_1g047800 | 34.694 | 147 | 82 | 2 | 3 | 145 | 4 | 140 | 4.75e-16 | 79.3 |
| MS.gene79332.t1 | MTR_3g007190 | 30.085 | 236 | 131 | 2 | 1 | 202 | 1 | 236 | 4.82e-16 | 79.3 |
| MS.gene79332.t1 | MTR_3g032150 | 34.722 | 144 | 87 | 4 | 5 | 142 | 4 | 146 | 5.51e-16 | 79.3 |
| MS.gene79332.t1 | MTR_3g033240 | 34.014 | 147 | 90 | 4 | 2 | 142 | 3 | 148 | 6.22e-16 | 79.0 |
| MS.gene79332.t1 | MTR_3g032370 | 34.028 | 144 | 88 | 4 | 5 | 142 | 4 | 146 | 6.44e-16 | 79.0 |
| MS.gene79332.t1 | MTR_8g030860 | 34.028 | 144 | 92 | 3 | 2 | 142 | 3 | 146 | 6.62e-16 | 79.0 |
| MS.gene79332.t1 | MTR_3g014040 | 38.158 | 152 | 84 | 3 | 2 | 145 | 3 | 152 | 7.05e-16 | 79.0 |
| MS.gene79332.t1 | MTR_0083s0110 | 30.994 | 171 | 106 | 4 | 2 | 160 | 3 | 173 | 2.35e-15 | 73.2 |
| MS.gene79332.t1 | MTR_0002s0090 | 36.301 | 146 | 88 | 3 | 2 | 142 | 3 | 148 | 3.45e-15 | 76.6 |
| MS.gene79332.t1 | MTR_3g035500 | 36.301 | 146 | 88 | 3 | 2 | 142 | 3 | 148 | 3.45e-15 | 76.6 |
| MS.gene79332.t1 | MTR_3g035940 | 36.301 | 146 | 88 | 3 | 2 | 142 | 3 | 148 | 4.34e-15 | 76.6 |
| MS.gene79332.t1 | MTR_3g032340 | 30.000 | 150 | 96 | 3 | 2 | 142 | 3 | 152 | 5.61e-15 | 76.3 |
| MS.gene79332.t1 | MTR_2g063777 | 32.653 | 147 | 92 | 4 | 2 | 142 | 3 | 148 | 8.52e-15 | 75.5 |
| MS.gene79332.t1 | MTR_4g050410 | 35.211 | 142 | 85 | 4 | 2 | 142 | 3 | 138 | 9.34e-15 | 75.5 |
| MS.gene79332.t1 | MTR_3g014470 | 34.395 | 157 | 97 | 4 | 1 | 154 | 1 | 154 | 1.15e-14 | 75.1 |
| MS.gene79332.t1 | MTR_0005s0200 | 34.266 | 143 | 87 | 3 | 8 | 145 | 27 | 167 | 1.91e-14 | 74.7 |
| MS.gene79332.t1 | MTR_3g014510 | 36.424 | 151 | 86 | 5 | 1 | 144 | 1 | 148 | 2.15e-14 | 74.3 |
| MS.gene79332.t1 | MTR_3g435740 | 35.211 | 142 | 85 | 4 | 2 | 142 | 48 | 183 | 2.83e-14 | 73.9 |
| MS.gene79332.t1 | MTR_3g014080 | 36.601 | 153 | 88 | 4 | 4 | 148 | 3 | 154 | 3.28e-14 | 73.9 |
| MS.gene79332.t1 | MTR_3g014080 | 33.962 | 159 | 84 | 5 | 4 | 148 | 3 | 154 | 3.65e-14 | 73.6 |
| MS.gene79332.t1 | MTR_3g035480 | 31.507 | 146 | 95 | 3 | 2 | 142 | 3 | 148 | 3.68e-14 | 73.6 |
| MS.gene79332.t1 | MTR_3g033860 | 35.714 | 154 | 78 | 6 | 2 | 142 | 3 | 148 | 3.72e-14 | 73.6 |
| MS.gene79332.t1 | MTR_0002s0110 | 31.507 | 146 | 95 | 3 | 2 | 142 | 3 | 148 | 4.94e-14 | 73.2 |
| MS.gene79332.t1 | MTR_3g022870 | 50.000 | 94 | 34 | 3 | 1 | 91 | 1 | 84 | 8.16e-14 | 72.8 |
| MS.gene79332.t1 | MTR_3g033080 | 35.211 | 142 | 86 | 4 | 2 | 142 | 3 | 139 | 8.57e-14 | 72.4 |
| MS.gene79332.t1 | MTR_3g022870 | 50.000 | 94 | 34 | 3 | 1 | 91 | 1 | 84 | 8.88e-14 | 72.4 |
| MS.gene79332.t1 | MTR_2g014830 | 34.507 | 142 | 89 | 2 | 2 | 142 | 3 | 141 | 2.45e-13 | 67.4 |
| MS.gene79332.t1 | MTR_3g033110 | 33.803 | 142 | 87 | 4 | 2 | 142 | 3 | 138 | 2.63e-13 | 71.2 |
| MS.gene79332.t1 | MTR_3g034380 | 33.333 | 153 | 83 | 5 | 2 | 142 | 3 | 148 | 3.43e-13 | 70.9 |
| MS.gene79332.t1 | MTR_3g034430 | 32.051 | 156 | 81 | 5 | 2 | 142 | 3 | 148 | 8.04e-13 | 69.7 |
| MS.gene79332.t1 | MTR_2g039090 | 34.641 | 153 | 84 | 4 | 2 | 153 | 3 | 140 | 8.74e-13 | 69.3 |
| MS.gene79332.t1 | MTR_3g014390 | 32.278 | 158 | 99 | 4 | 1 | 154 | 1 | 154 | 1.00e-12 | 69.3 |
| MS.gene79332.t1 | MTR_2g014840 | 36.111 | 144 | 88 | 3 | 1 | 142 | 1 | 142 | 1.04e-12 | 69.3 |
| MS.gene79332.t1 | MTR_0267s0070 | 36.601 | 153 | 85 | 3 | 1 | 149 | 1 | 145 | 1.50e-12 | 68.9 |
| MS.gene79332.t1 | MTR_2g014730 | 35.971 | 139 | 85 | 2 | 5 | 142 | 6 | 141 | 1.84e-12 | 68.6 |
| MS.gene79332.t1 | MTR_5g095910 | 35.172 | 145 | 91 | 3 | 1 | 142 | 1 | 145 | 2.38e-12 | 68.2 |
| MS.gene79332.t1 | MTR_3g020890 | 33.562 | 146 | 88 | 3 | 1 | 144 | 1 | 139 | 2.69e-12 | 68.2 |
| MS.gene79332.t1 | MTR_3g033130 | 34.965 | 143 | 85 | 5 | 2 | 142 | 3 | 139 | 3.98e-12 | 67.4 |
| MS.gene79332.t1 | MTR_3g014320 | 35.135 | 148 | 88 | 3 | 1 | 142 | 1 | 146 | 4.10e-12 | 67.4 |
| MS.gene79332.t1 | MTR_1g037610 | 35.211 | 142 | 86 | 2 | 1 | 136 | 1 | 142 | 5.05e-12 | 67.4 |
| MS.gene79332.t1 | MTR_3g014500 | 32.468 | 154 | 84 | 5 | 4 | 149 | 6 | 147 | 6.87e-12 | 63.5 |
| MS.gene79332.t1 | MTR_2g014820 | 42.268 | 97 | 54 | 2 | 1 | 95 | 1 | 97 | 4.28e-11 | 64.3 |
| MS.gene79332.t1 | MTR_3g070590 | 32.667 | 150 | 80 | 4 | 1 | 145 | 1 | 134 | 7.51e-11 | 63.5 |
| MS.gene79332.t1 | MTR_3g071130 | 32.667 | 150 | 80 | 4 | 1 | 145 | 1 | 134 | 8.29e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79332.t1 | AT3G14470 | 35.294 | 153 | 85 | 4 | 1 | 144 | 4 | 151 | 1.20e-14 | 75.1 |
| MS.gene79332.t1 | AT3G14470 | 35.294 | 153 | 85 | 4 | 1 | 144 | 4 | 151 | 1.20e-14 | 75.1 |
Find 56 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCACTTACCAGCAATTTAT+TGG | 0.159691 | 3.1:-18610876 | MS.gene79332:CDS |
| GTTCAACAACACTTTCTATT+TGG | 0.193931 | 3.1:+18608991 | None:intergenic |
| ATCTTACTCCACTTCTTATC+AGG | 0.249061 | 3.1:+18608891 | None:intergenic |
| AAAAGAGGAAGAAGAATAGA+AGG | 0.291381 | 3.1:-18609257 | MS.gene79332:CDS |
| AAAAGCCACTACATTCTTCT+TGG | 0.294971 | 3.1:+18608923 | None:intergenic |
| CCAGAAAATCCATGGTTAAA+TGG | 0.295849 | 3.1:+18610287 | None:intergenic |
| CTACAAATCCATTTGAATCT+AGG | 0.304525 | 3.1:-18610835 | MS.gene79332:CDS |
| CCACTTACCAGCAATTTATT+GGG | 0.324163 | 3.1:-18610875 | MS.gene79332:CDS |
| CACCACCCGACATAAATCTT+TGG | 0.329096 | 3.1:+18609054 | None:intergenic |
| TACCAGCAATTTATTGGGCT+TGG | 0.371309 | 3.1:-18610870 | MS.gene79332:CDS |
| AAAGCCACTACATTCTTCTT+GGG | 0.385734 | 3.1:+18608924 | None:intergenic |
| TCAAGTGATTATTGAGAAGT+TGG | 0.395437 | 3.1:-18611137 | MS.gene79332:CDS |
| CTTTCTATTTGGAGATATGA+TGG | 0.402158 | 3.1:+18609002 | None:intergenic |
| ACCACCCGACATAAATCTTT+GGG | 0.402683 | 3.1:+18609055 | None:intergenic |
| CAATTGCAGCACATACTAAC+AGG | 0.406834 | 3.1:-18610380 | MS.gene79332:intron |
| AATCTCAGACGATGGCAATA+AGG | 0.410553 | 3.1:-18609232 | MS.gene79332:CDS |
| AACCAAGCCCAATAAATTGC+TGG | 0.418297 | 3.1:+18610868 | None:intergenic |
| ATCTAGGCTCAATCAACAAC+TGG | 0.431985 | 3.1:-18610819 | MS.gene79332:CDS |
| CCCAATAAATTGCTGGTAAG+TGG | 0.464199 | 3.1:+18610875 | None:intergenic |
| GATTATTGAGAAGTTGGCTT+CGG | 0.469107 | 3.1:-18611131 | MS.gene79332:CDS |
| ATCATGGCAGAGTTGGTAGC+AGG | 0.472083 | 3.1:-18611181 | MS.gene79332:CDS |
| AGATATGATGGTCTGACATC+AGG | 0.473798 | 3.1:+18609014 | None:intergenic |
| GAACGGGAATGCAGAATGTT+GGG | 0.476129 | 3.1:-18610324 | MS.gene79332:CDS |
| TATCGTGACAACACGTGAAA+AGG | 0.482633 | 3.1:-18610255 | MS.gene79332:CDS |
| AAATCTTTGGGCTTGGTACA+AGG | 0.484970 | 3.1:+18609067 | None:intergenic |
| TAGAAATCTCATCTAATAGT+TGG | 0.485444 | 3.1:+18610936 | None:intergenic |
| GGAACGGGAATGCAGAATGT+TGG | 0.496316 | 3.1:-18610325 | MS.gene79332:CDS |
| CCGACATAAATCTTTGGGCT+TGG | 0.499723 | 3.1:+18609060 | None:intergenic |
| CAATTCTATCAACCATGTGC+TGG | 0.501537 | 3.1:-18611041 | MS.gene79332:CDS |
| TCTCTGCTTCTTCCAGCACA+TGG | 0.512834 | 3.1:+18611029 | None:intergenic |
| TCATTATATCATGGCAGAGT+TGG | 0.519801 | 3.1:-18611188 | None:intergenic |
| TCAACATCAATCTCAGAAGA+AGG | 0.528172 | 3.1:+18608969 | None:intergenic |
| GCACTATGTGGCTGATATGA+TGG | 0.531188 | 3.1:-18607818 | None:intergenic |
| TGATTGAGCCTAGATTCAAA+TGG | 0.538966 | 3.1:+18610827 | None:intergenic |
| AAAGCATATATGTGAAGAAG+TGG | 0.541378 | 3.1:-18610994 | MS.gene79332:CDS |
| AGATGAAGCCTGATAAGAAG+TGG | 0.544147 | 3.1:-18608899 | MS.gene79332:CDS |
| CAGAGTGCTGAAGAGAAAAG+AGG | 0.547048 | 3.1:-18609272 | MS.gene79332:CDS |
| AAGCCACTACATTCTTCTTG+GGG | 0.550965 | 3.1:+18608925 | None:intergenic |
| TCTTACTTCCAGAAAATCCA+TGG | 0.553203 | 3.1:+18610279 | None:intergenic |
| CCAAGCCCAAAGATTTATGT+CGG | 0.554804 | 3.1:-18609060 | MS.gene79332:CDS |
| TTGTGCTAGTAACGAAGGCT+TGG | 0.559066 | 3.1:-18610741 | MS.gene79332:intron |
| CAAGCCCAAAGATTTATGTC+GGG | 0.565932 | 3.1:-18609059 | MS.gene79332:CDS |
| CTTCTCAATAATCACTTGAA+AGG | 0.569756 | 3.1:+18611141 | None:intergenic |
| CAACATTAAGTTCTTTCACA+AGG | 0.577320 | 3.1:+18611068 | None:intergenic |
| TCATGGCAGAGTTGGTAGCA+GGG | 0.580865 | 3.1:-18611180 | MS.gene79332:CDS |
| TTACTACTTCCATTTAACCA+TGG | 0.602352 | 3.1:-18610296 | MS.gene79332:CDS |
| GCCCAAAGATTTATGTCGGG+TGG | 0.603386 | 3.1:-18609056 | MS.gene79332:CDS |
| AGAAGGAAAATCTCAGACGA+TGG | 0.604514 | 3.1:-18609240 | MS.gene79332:CDS |
| CATGGCAGAGTTGGTAGCAG+GGG | 0.609479 | 3.1:-18611179 | MS.gene79332:CDS |
| CGTGACAACACGTGAAAAGG+AGG | 0.634159 | 3.1:-18610252 | MS.gene79332:intron |
| TAGCAGCTATGTGCACTATG+TGG | 0.636705 | 3.1:-18607830 | MS.gene79332:CDS |
| GGTCCTTGTGCTAGTAACGA+AGG | 0.641533 | 3.1:-18610746 | MS.gene79332:CDS |
| AGCCACTACATTCTTCTTGG+GGG | 0.646230 | 3.1:+18608926 | None:intergenic |
| AGTGGGCAAGGTCAATCAAG+CGG | 0.664685 | 3.1:-18609106 | MS.gene79332:intron |
| AAGCCTTCGTTACTAGCACA+AGG | 0.669355 | 3.1:+18610743 | None:intergenic |
| GTTGATATCAGAGACTACTT+CGG | 0.688225 | 3.1:-18611109 | MS.gene79332:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAAAATAATAGTTTC+AGG | + | chr3.1:18609230-18609249 | None:intergenic | 10.0% |
| !! | ATATAAATTACACAATAAAA+AGG | + | chr3.1:18608976-18608995 | None:intergenic | 10.0% |
| !! | AAAAAAATTGTGCTTTCATT+CGG | + | chr3.1:18609442-18609461 | None:intergenic | 20.0% |
| !! | TATTGAATCAAAATTACCTT+AGG | + | chr3.1:18609111-18609130 | None:intergenic | 20.0% |
| !! | TCAACATTTAACAGAAAATT+AGG | + | chr3.1:18609063-18609082 | None:intergenic | 20.0% |
| !!! | AAATGAATTGATAATTGCTT+TGG | + | chr3.1:18608557-18608576 | None:intergenic | 20.0% |
| !!! | AATATTTTGTTCATTTCCAA+TGG | - | chr3.1:18609127-18609146 | MS.gene79332:intron | 20.0% |
| !!! | ATATTTTGTTCATTTCCAAT+GGG | - | chr3.1:18609128-18609147 | MS.gene79332:intron | 20.0% |
| ! | AAAAAAATCCAAGTTCAAAG+AGG | - | chr3.1:18609790-18609809 | MS.gene79332:intron | 25.0% |
| ! | AAAAAATCCAAGTTCAAAGA+GGG | - | chr3.1:18609791-18609810 | MS.gene79332:intron | 25.0% |
| ! | AAACAAAATTTAAGTCAAGG+TGG | + | chr3.1:18609331-18609350 | None:intergenic | 25.0% |
| ! | AAAGAAATCATGAAGTGTAA+AGG | - | chr3.1:18610414-18610433 | MS.gene79332:intron | 25.0% |
| ! | ATCAACAGGCAATTAAATAT+AGG | + | chr3.1:18610988-18611007 | None:intergenic | 25.0% |
| ! | GAAAATAGAATAACAATGAC+AGG | + | chr3.1:18609362-18609381 | None:intergenic | 25.0% |
| ! | GCAATTAAATATAGGGATAT+TGG | + | chr3.1:18610980-18610999 | None:intergenic | 25.0% |
| ! | TAGAAATCTCATCTAATAGT+TGG | + | chr3.1:18608066-18608085 | None:intergenic | 25.0% |
| ! | TATATATATATCCTCTGACT+TGG | - | chr3.1:18608991-18609010 | MS.gene79332:CDS | 25.0% |
| ! | TATATCAAATACCTCTGATT+AGG | + | chr3.1:18608940-18608959 | None:intergenic | 25.0% |
| ! | TCAACAGGCAATTAAATATA+GGG | + | chr3.1:18610987-18611006 | None:intergenic | 25.0% |
| ! | TGGAAACAAAATTTAAGTCA+AGG | + | chr3.1:18609334-18609353 | None:intergenic | 25.0% |
| ! | TTCCTTTGTAATCTTGTTAA+TGG | + | chr3.1:18610674-18610693 | None:intergenic | 25.0% |
| ! | TTTCAGTTAAAAGAAAATGC+TGG | - | chr3.1:18609665-18609684 | MS.gene79332:intron | 25.0% |
| ! | TTTGTAATCTTGTTAATGGA+GGG | + | chr3.1:18610670-18610689 | None:intergenic | 25.0% |
| !! | TTTAAAGTATCATGTGTTCT+GGG | + | chr3.1:18609559-18609578 | None:intergenic | 25.0% |
| !!! | AAATATAGGGATATTGGTTT+AGG | + | chr3.1:18610974-18610993 | None:intergenic | 25.0% |
| !!! | TATTTTTGATGTGCTGAATA+TGG | - | chr3.1:18611117-18611136 | MS.gene79332:CDS | 25.0% |
| !!! | TTTTAAAGTATCATGTGTTC+TGG | + | chr3.1:18609560-18609579 | None:intergenic | 25.0% |
| AAAAGAGGAAGAAGAATAGA+AGG | - | chr3.1:18609742-18609761 | MS.gene79332:intron | 30.0% | |
| AAAGCATATATGTGAAGAAG+TGG | - | chr3.1:18608005-18608024 | MS.gene79332:intron | 30.0% | |
| AAGACCAAGAAATGAGTAAA+AGG | - | chr3.1:18609816-18609835 | MS.gene79332:intron | 30.0% | |
| AATAACAATGACAGGAAAAC+TGG | + | chr3.1:18609354-18609373 | None:intergenic | 30.0% | |
| ACAACCAAAGATAATACCAT+AGG | + | chr3.1:18611150-18611169 | None:intergenic | 30.0% | |
| ATACCTCTGATATCACAATT+GGG | - | chr3.1:18610808-18610827 | MS.gene79332:CDS | 30.0% | |
| ATAGCATAAGGAAAATTGGT+AGG | - | chr3.1:18610233-18610252 | MS.gene79332:intron | 30.0% | |
| ATATCCATATTAATGATGGC+AGG | + | chr3.1:18610613-18610632 | None:intergenic | 30.0% | |
| ATATCTATCTCAGTATCATC+AGG | + | chr3.1:18610184-18610203 | None:intergenic | 30.0% | |
| ATATGGTAGAGATGTTGATA+AGG | - | chr3.1:18608339-18608358 | MS.gene79332:intron | 30.0% | |
| ATCAAGGAAGGAAAAGAAAT+TGG | + | chr3.1:18610939-18610958 | None:intergenic | 30.0% | |
| ATCATCTCATTAATCAAGGA+AGG | + | chr3.1:18610951-18610970 | None:intergenic | 30.0% | |
| ATTACAAAGGAAATCACTAG+TGG | - | chr3.1:18610682-18610701 | MS.gene79332:intron | 30.0% | |
| CAACATTAAGTTCTTTCACA+AGG | + | chr3.1:18607934-18607953 | None:intergenic | 30.0% | |
| CTACAAATCCATTTGAATCT+AGG | - | chr3.1:18608164-18608183 | MS.gene79332:intron | 30.0% | |
| CTCCATTAACAAGATTACAA+AGG | - | chr3.1:18610669-18610688 | MS.gene79332:intron | 30.0% | |
| CTTCTCAATAATCACTTGAA+AGG | + | chr3.1:18607861-18607880 | None:intergenic | 30.0% | |
| CTTTCTATTTGGAGATATGA+TGG | + | chr3.1:18610000-18610019 | None:intergenic | 30.0% | |
| CTTTGTAATCTTGTTAATGG+AGG | + | chr3.1:18610671-18610690 | None:intergenic | 30.0% | |
| GCCATCATTAATATGGATAT+GGG | - | chr3.1:18610613-18610632 | MS.gene79332:intron | 30.0% | |
| GTGCAATGTTAAAAGTAACA+AGG | - | chr3.1:18610543-18610562 | MS.gene79332:intron | 30.0% | |
| GTTCAACAACACTTTCTATT+TGG | + | chr3.1:18610011-18610030 | None:intergenic | 30.0% | |
| TAGAGGGAGATAATAGTATA+AGG | - | chr3.1:18611084-18611103 | MS.gene79332:CDS | 30.0% | |
| TAGGATCATCTCATTAATCA+AGG | + | chr3.1:18610955-18610974 | None:intergenic | 30.0% | |
| TATCCATATTAATGATGGCA+GGG | + | chr3.1:18610612-18610631 | None:intergenic | 30.0% | |
| TATCTATCTCAGTATCATCA+GGG | + | chr3.1:18610183-18610202 | None:intergenic | 30.0% | |
| TCAAGTGATTATTGAGAAGT+TGG | - | chr3.1:18607862-18607881 | MS.gene79332:intron | 30.0% | |
| TCATTTAATTCTTCAGCAGA+TGG | - | chr3.1:18608571-18608590 | MS.gene79332:intron | 30.0% | |
| TCTCATAGCATAAGGAAAAT+TGG | - | chr3.1:18610229-18610248 | MS.gene79332:intron | 30.0% | |
| TGATACTGAGATAGATATTG+AGG | - | chr3.1:18610186-18610205 | MS.gene79332:intron | 30.0% | |
| TGCCATCATTAATATGGATA+TGG | - | chr3.1:18610612-18610631 | MS.gene79332:intron | 30.0% | |
| TTACTACTTCCATTTAACCA+TGG | - | chr3.1:18608703-18608722 | MS.gene79332:intron | 30.0% | |
| TTAGTTGGAAACCATCAAAA+AGG | - | chr3.1:18608281-18608300 | MS.gene79332:intron | 30.0% | |
| ! | ATATCAGAGGTATGATTTGT+AGG | + | chr3.1:18610801-18610820 | None:intergenic | 30.0% |
| ! | ATGTTACAAGAAGTTGGTTA+AGG | - | chr3.1:18610495-18610514 | MS.gene79332:intron | 30.0% |
| ! | CTAATCAAGTTTTTACTTGC+AGG | - | chr3.1:18608367-18608386 | MS.gene79332:intron | 30.0% |
| ! | TCAGAATCTTTTGATGTTGT+TGG | - | chr3.1:18608526-18608545 | MS.gene79332:intron | 30.0% |
| ! | TGAGTATGGATTATTGTTAG+TGG | - | chr3.1:18609861-18609880 | MS.gene79332:intron | 30.0% |
| ! | TGTTCCTTTTACTCATTTCT+TGG | + | chr3.1:18609823-18609842 | None:intergenic | 30.0% |
| ! | TTAAGAAGACATCTTTGAAG+AGG | - | chr3.1:18610145-18610164 | MS.gene79332:intron | 30.0% |
| !! | ACTTTCTTTAAAGTGCAATC+TGG | + | chr3.1:18608913-18608932 | None:intergenic | 30.0% |
| AAAAGCCACTACATTCTTCT+TGG | + | chr3.1:18610079-18610098 | None:intergenic | 35.0% | |
| AAAGCCACTACATTCTTCTT+GGG | + | chr3.1:18610078-18610097 | None:intergenic | 35.0% | |
| ACATCATGTCTCATAGCATA+AGG | - | chr3.1:18610221-18610240 | MS.gene79332:intron | 35.0% | |
| ACATTATTCAGGGGAGTAAA+GGG | + | chr3.1:18610280-18610299 | None:intergenic | 35.0% | |
| ACCACTTACCAGCAATTTAT+TGG | - | chr3.1:18608123-18608142 | MS.gene79332:intron | 35.0% | |
| AGCAAATCTTGTTGAATCGA+TGG | + | chr3.1:18608890-18608909 | None:intergenic | 35.0% | |
| AGTGAAAGGACACATTATTC+AGG | + | chr3.1:18610291-18610310 | None:intergenic | 35.0% | |
| ATAATAGTTTCAGGAGACCT+TGG | + | chr3.1:18609221-18609240 | None:intergenic | 35.0% | |
| ATCCATATTAATGATGGCAG+GGG | + | chr3.1:18610611-18610630 | None:intergenic | 35.0% | |
| ATCTATCTCAGTATCATCAG+GGG | + | chr3.1:18610182-18610201 | None:intergenic | 35.0% | |
| ATCTTACTCCACTTCTTATC+AGG | + | chr3.1:18610111-18610130 | None:intergenic | 35.0% | |
| ATGAAGTGTAAAGGAGATTG+TGG | - | chr3.1:18610423-18610442 | MS.gene79332:intron | 35.0% | |
| CAAAATTACCTTAGGAGCAA+GGG | + | chr3.1:18609103-18609122 | None:intergenic | 35.0% | |
| CAGAAGAAAAAGTTGGGATT+GGG | - | chr3.1:18608226-18608245 | MS.gene79332:intron | 35.0% | |
| CATACCTCTGATATCACAAT+TGG | - | chr3.1:18610807-18610826 | MS.gene79332:CDS | 35.0% | |
| CCACTTACCAGCAATTTATT+GGG | - | chr3.1:18608124-18608143 | MS.gene79332:intron | 35.0% | |
| CCAGAAAATCCATGGTTAAA+TGG | + | chr3.1:18608715-18608734 | None:intergenic | 35.0% | |
| CGTGATCTCATTGTTGAAAT+TGG | + | chr3.1:18609589-18609608 | None:intergenic | 35.0% | |
| GAAAAGGAGGTAGCATATAT+AGG | - | chr3.1:18608760-18608779 | MS.gene79332:intron | 35.0% | |
| GAATACAAACCATAACCCAT+TGG | + | chr3.1:18609146-18609165 | None:intergenic | 35.0% | |
| GCAAAGCAGAAGAAAAAGTT+GGG | - | chr3.1:18608220-18608239 | MS.gene79332:intron | 35.0% | |
| GCCCATATCCATATTAATGA+TGG | + | chr3.1:18610617-18610636 | None:intergenic | 35.0% | |
| GTCTCCTATGGTATTATCTT+TGG | - | chr3.1:18611143-18611162 | MS.gene79332:CDS | 35.0% | |
| GTGAAAGGACACATTATTCA+GGG | + | chr3.1:18610290-18610309 | None:intergenic | 35.0% | |
| GTTAGTGGAACATGATAAGT+GGG | - | chr3.1:18609876-18609895 | MS.gene79332:intron | 35.0% | |
| GTTCCAATAATCAGCATAGT+GGG | - | chr3.1:18608409-18608428 | MS.gene79332:intron | 35.0% | |
| GTTGATATCAGAGACTACTT+CGG | - | chr3.1:18607890-18607909 | MS.gene79332:intron | 35.0% | |
| GTTGATGTACTATGCAAGAA+GGG | - | chr3.1:18611002-18611021 | MS.gene79332:CDS | 35.0% | |
| TCAAAATTACCTTAGGAGCA+AGG | + | chr3.1:18609104-18609123 | None:intergenic | 35.0% | |
| TCAACATCAATCTCAGAAGA+AGG | + | chr3.1:18610033-18610052 | None:intergenic | 35.0% | |
| TCATTAATATGGATATGGGC+AGG | - | chr3.1:18610617-18610636 | MS.gene79332:intron | 35.0% | |
| TCCCTCTTGACATTTGATTA+CGG | - | chr3.1:18611026-18611045 | MS.gene79332:CDS | 35.0% | |
| TCGTAGATGTTACAAGAAGT+TGG | - | chr3.1:18610489-18610508 | MS.gene79332:intron | 35.0% | |
| TCTTACTTCCAGAAAATCCA+TGG | + | chr3.1:18608723-18608742 | None:intergenic | 35.0% | |
| TGAAAGGACACATTATTCAG+GGG | + | chr3.1:18610289-18610308 | None:intergenic | 35.0% | |
| TGATAAGAAGTGGAGTAAGA+TGG | - | chr3.1:18610110-18610129 | MS.gene79332:intron | 35.0% | |
| TGATTGAGCCTAGATTCAAA+TGG | + | chr3.1:18608175-18608194 | None:intergenic | 35.0% | |
| TGCAAAGCAGAAGAAAAAGT+TGG | - | chr3.1:18608219-18608238 | MS.gene79332:intron | 35.0% | |
| TGTTAGTGGAACATGATAAG+TGG | - | chr3.1:18609875-18609894 | MS.gene79332:intron | 35.0% | |
| TGTTGATGTACTATGCAAGA+AGG | - | chr3.1:18611001-18611020 | MS.gene79332:CDS | 35.0% | |
| TTACTTGCAGGAAATGATAG+TGG | - | chr3.1:18608379-18608398 | MS.gene79332:intron | 35.0% | |
| TTCTTGCATAGTACATCAAC+AGG | + | chr3.1:18611002-18611021 | None:intergenic | 35.0% | |
| ! | AAACCCACTATGCTGATTAT+TGG | + | chr3.1:18608415-18608434 | None:intergenic | 35.0% |
| ! | ACTTTTAACATTGCACTCAG+TGG | + | chr3.1:18610539-18610558 | None:intergenic | 35.0% |
| ! | AGCATTTTGAGCTTAAAGCA+TGG | - | chr3.1:18608494-18608513 | MS.gene79332:intron | 35.0% |
| ! | CCATTTAACCATGGATTTTC+TGG | - | chr3.1:18608712-18608731 | MS.gene79332:intron | 35.0% |
| ! | GATTATTGAGAAGTTGGCTT+CGG | - | chr3.1:18607868-18607887 | MS.gene79332:intron | 35.0% |
| ! | GCATTTTGAGCTTAAAGCAT+GGG | - | chr3.1:18608495-18608514 | MS.gene79332:intron | 35.0% |
| !! | AATAATCAGCATAGTGGGTT+TGG | - | chr3.1:18608414-18608433 | MS.gene79332:intron | 35.0% |
| !! | ATAATCAGCATAGTGGGTTT+GGG | - | chr3.1:18608415-18608434 | MS.gene79332:intron | 35.0% |
| !! | GAAGTATGCATTTCTGAGAT+TGG | - | chr3.1:18610759-18610778 | MS.gene79332:CDS | 35.0% |
| !! | GTTTTAGACGATATCTGGAA+CGG | - | chr3.1:18608658-18608677 | MS.gene79332:intron | 35.0% |
| !! | TGTTCATTTCCAATGGGTTA+TGG | - | chr3.1:18609134-18609153 | MS.gene79332:intron | 35.0% |
| !! | TTTTAGACGATATCTGGAAC+GGG | - | chr3.1:18608659-18608678 | MS.gene79332:intron | 35.0% |
| !! | TTTTTAGCATCTGCTGAGTA+TGG | - | chr3.1:18609847-18609866 | MS.gene79332:intron | 35.0% |
| !!! | TGCTTGTTTTAGACGATATC+TGG | - | chr3.1:18608653-18608672 | MS.gene79332:intron | 35.0% |
| AAAAAGTTGGGATTGGGAGA+AGG | - | chr3.1:18608232-18608251 | MS.gene79332:intron | 40.0% | |
| AACCAAGCCCAATAAATTGC+TGG | + | chr3.1:18608134-18608153 | None:intergenic | 40.0% | |
| AAGCCACTACATTCTTCTTG+GGG | + | chr3.1:18610077-18610096 | None:intergenic | 40.0% | |
| AATCTCAGACGATGGCAATA+AGG | - | chr3.1:18609767-18609786 | MS.gene79332:intron | 40.0% | |
| ACCACCCGACATAAATCTTT+GGG | + | chr3.1:18609947-18609966 | None:intergenic | 40.0% | |
| ACCCGTAATCAAATGTCAAG+AGG | + | chr3.1:18611031-18611050 | None:intergenic | 40.0% | |
| AGAAAGTCTTGCCTAATCAG+AGG | - | chr3.1:18608926-18608945 | MS.gene79332:CDS | 40.0% | |
| AGAAGGAAAATCTCAGACGA+TGG | - | chr3.1:18609759-18609778 | MS.gene79332:intron | 40.0% | |
| AGACATTGTGGTGCATATAG+AGG | - | chr3.1:18611067-18611086 | MS.gene79332:CDS | 40.0% | |
| AGATATGATGGTCTGACATC+AGG | + | chr3.1:18609988-18610007 | None:intergenic | 40.0% | |
| AGATGAAGCCTGATAAGAAG+TGG | - | chr3.1:18610100-18610119 | MS.gene79332:intron | 40.0% | |
| ATCTAGGCTCAATCAACAAC+TGG | - | chr3.1:18608180-18608199 | MS.gene79332:intron | 40.0% | |
| CAAGCCCAAAGATTTATGTC+GGG | - | chr3.1:18609940-18609959 | MS.gene79332:intron | 40.0% | |
| CAATTCTATCAACCATGTGC+TGG | - | chr3.1:18607958-18607977 | MS.gene79332:intron | 40.0% | |
| CAATTGCAGCACATACTAAC+AGG | - | chr3.1:18608619-18608638 | MS.gene79332:intron | 40.0% | |
| CACATTATTCAGGGGAGTAA+AGG | + | chr3.1:18610281-18610300 | None:intergenic | 40.0% | |
| CATCCAAATGATACGAACAG+TGG | - | chr3.1:18608822-18608841 | MS.gene79332:intron | 40.0% | |
| CCAAGCCCAAAGATTTATGT+CGG | - | chr3.1:18609939-18609958 | MS.gene79332:intron | 40.0% | |
| CCCAATAAATTGCTGGTAAG+TGG | + | chr3.1:18608127-18608146 | None:intergenic | 40.0% | |
| CCCGTAATCAAATGTCAAGA+GGG | + | chr3.1:18611030-18611049 | None:intergenic | 40.0% | |
| CCCTCTTGACATTTGATTAC+GGG | - | chr3.1:18611027-18611046 | MS.gene79332:CDS | 40.0% | |
| CGACTGTAGTTTGATGAACT+AGG | - | chr3.1:18609607-18609626 | MS.gene79332:intron | 40.0% | |
| CGATGGAGTGTGTGAAAATT+TGG | + | chr3.1:18608873-18608892 | None:intergenic | 40.0% | |
| CTTGACATTTGATTACGGGT+TGG | - | chr3.1:18611031-18611050 | MS.gene79332:CDS | 40.0% | |
| GACATTGTGGTGCATATAGA+GGG | - | chr3.1:18611068-18611087 | MS.gene79332:CDS | 40.0% | |
| GCAGAAGAAAAAGTTGGGAT+TGG | - | chr3.1:18608225-18608244 | MS.gene79332:intron | 40.0% | |
| GGTTCCAATAATCAGCATAG+TGG | - | chr3.1:18608408-18608427 | MS.gene79332:intron | 40.0% | |
| GTATGTGCTGCAATTGATGT+TGG | + | chr3.1:18608615-18608634 | None:intergenic | 40.0% | |
| GTTGTACACAAGCTTAGCAA+GGG | + | chr3.1:18608458-18608477 | None:intergenic | 40.0% | |
| GTTTGATGAACTAGGTAGTG+TGG | - | chr3.1:18609615-18609634 | MS.gene79332:intron | 40.0% | |
| TACCAGCAATTTATTGGGCT+TGG | - | chr3.1:18608129-18608148 | MS.gene79332:intron | 40.0% | |
| TATCGTGACAACACGTGAAA+AGG | - | chr3.1:18608744-18608763 | MS.gene79332:intron | 40.0% | |
| TCCCGTGACAAAAATCATCT+TGG | + | chr3.1:18610838-18610857 | None:intergenic | 40.0% | |
| TCTATATGCACCACAATGTC+TGG | + | chr3.1:18611068-18611087 | None:intergenic | 40.0% | |
| TCTATCTCAGTATCATCAGG+GGG | + | chr3.1:18610181-18610200 | None:intergenic | 40.0% | |
| TGAATATGGCATGTCTCCTA+TGG | - | chr3.1:18611131-18611150 | MS.gene79332:CDS | 40.0% | |
| TGCTATGAGACATGATGTCT+AGG | + | chr3.1:18610219-18610238 | None:intergenic | 40.0% | |
| TTCCCCTGCCATCATTAATA+TGG | - | chr3.1:18610606-18610625 | MS.gene79332:intron | 40.0% | |
| TTGCCACTGTTCGTATCATT+TGG | + | chr3.1:18608828-18608847 | None:intergenic | 40.0% | |
| ! | AAATCTTTGGGCTTGGTACA+AGG | + | chr3.1:18609935-18609954 | None:intergenic | 40.0% |
| ! | AAGTAACAAGGCGTTCAGAA+AGG | - | chr3.1:18610555-18610574 | MS.gene79332:intron | 40.0% |
| ! | AATCACTAGTGGACAAGTGA+AGG | - | chr3.1:18610693-18610712 | MS.gene79332:intron | 40.0% |
| ! | CTATGCTGATTATTGGAACC+TGG | + | chr3.1:18608408-18608427 | None:intergenic | 40.0% |
| ! | GAAGTTGGTTAAGGAGTTTG+TGG | - | chr3.1:18610504-18610523 | MS.gene79332:intron | 40.0% |
| ! | GATTTTTGTCACGGGAACAA+AGG | - | chr3.1:18610842-18610861 | MS.gene79332:CDS | 40.0% |
| ! | GCCAAGATGATTTTTGTCAC+GGG | - | chr3.1:18610834-18610853 | MS.gene79332:CDS | 40.0% |
| ! | GGCCAAGATGATTTTTGTCA+CGG | - | chr3.1:18610833-18610852 | MS.gene79332:CDS | 40.0% |
| ! | GTAGACGACAACCTTTTTGA+TGG | + | chr3.1:18608295-18608314 | None:intergenic | 40.0% |
| ! | GTCTTTTCCCTCTTTGAACT+TGG | + | chr3.1:18609801-18609820 | None:intergenic | 40.0% |
| ! | TACATTCTTCTTGGGGGTTT+TGG | + | chr3.1:18610070-18610089 | None:intergenic | 40.0% |
| ! | TTCAGAAAGGTGTATGTGAG+AGG | - | chr3.1:18610568-18610587 | MS.gene79332:intron | 40.0% |
| !! | GTGTGGTGTTATGAAACTCA+TGG | - | chr3.1:18609632-18609651 | MS.gene79332:intron | 40.0% |
| !! | TGGATTTGCTGAAGAATGCT+GGG | - | chr3.1:18610443-18610462 | MS.gene79332:intron | 40.0% |
| !! | TTTGATTACGGGTTGGTTGT+CGG | - | chr3.1:18611038-18611057 | MS.gene79332:CDS | 40.0% |
| AACCCCCAAGAAGAATGTAG+TGG | - | chr3.1:18610071-18610090 | MS.gene79332:intron | 45.0% | |
| AAGCCTTCGTTACTAGCACA+AGG | + | chr3.1:18608259-18608278 | None:intergenic | 45.0% | |
| AGCCACTACATTCTTCTTGG+GGG | + | chr3.1:18610076-18610095 | None:intergenic | 45.0% | |
| ATATGCACCACAATGTCTGG+TGG | + | chr3.1:18611065-18611084 | None:intergenic | 45.0% | |
| CACCACCCGACATAAATCTT+TGG | + | chr3.1:18609948-18609967 | None:intergenic | 45.0% | |
| CCACTTCTGAACAGAGTGAA+AGG | + | chr3.1:18610305-18610324 | None:intergenic | 45.0% | |
| CCGACATAAATCTTTGGGCT+TGG | + | chr3.1:18609942-18609961 | None:intergenic | 45.0% | |
| CCTTTCACTCTGTTCAGAAG+TGG | - | chr3.1:18610302-18610321 | MS.gene79332:CDS | 45.0% | |
| CGAAAAGAAAGCCAAGTCAG+AGG | + | chr3.1:18609005-18609024 | None:intergenic | 45.0% | |
| CGAGAAAGCAACCCTTTCTT+TGG | + | chr3.1:18610724-18610743 | None:intergenic | 45.0% | |
| CGTTGTACACAAGCTTAGCA+AGG | + | chr3.1:18608459-18608478 | None:intergenic | 45.0% | |
| CTATCTCAGTATCATCAGGG+GGG | + | chr3.1:18610180-18610199 | None:intergenic | 45.0% | |
| CTCTGATATCACAATTGGGC+AGG | - | chr3.1:18610812-18610831 | MS.gene79332:CDS | 45.0% | |
| CTGCCCAATTGTGATATCAG+AGG | + | chr3.1:18610814-18610833 | None:intergenic | 45.0% | |
| GAACGGGAATGCAGAATGTT+GGG | - | chr3.1:18608675-18608694 | MS.gene79332:intron | 45.0% | |
| GTGGATGAGTCGAGCATATA+TGG | - | chr3.1:18608322-18608341 | MS.gene79332:intron | 45.0% | |
| TAGCAGCTATGTGCACTATG+TGG | - | chr3.1:18611169-18611188 | MS.gene79332:CDS | 45.0% | |
| TCAATCTGGTGTGTTGGAGA+AGG | - | chr3.1:18610642-18610661 | MS.gene79332:intron | 45.0% | |
| TCTTTGTTCCCTTGCTCCTA+AGG | - | chr3.1:18609092-18609111 | MS.gene79332:CDS | 45.0% | |
| TGGAACATGATAAGTGGGCA+AGG | - | chr3.1:18609881-18609900 | MS.gene79332:intron | 45.0% | |
| TTGTGCTAGTAACGAAGGCT+TGG | - | chr3.1:18608258-18608277 | MS.gene79332:intron | 45.0% | |
| ! | AAGAAAGGGTTGCTTTCTCG+TGG | - | chr3.1:18610724-18610743 | MS.gene79332:intron | 45.0% |
| ! | GGAGTAAAGGGTACATTCAC+AGG | + | chr3.1:18610268-18610287 | None:intergenic | 45.0% |
| ! | GTAACGAAGGCTTGGTTAGT+TGG | - | chr3.1:18608266-18608285 | MS.gene79332:intron | 45.0% |
| ! | TGAAGGTGTGGCCAAAGAAA+GGG | - | chr3.1:18610710-18610729 | MS.gene79332:intron | 45.0% |
| !! | AGGAAATGATAGTGGCAACC+AGG | - | chr3.1:18608387-18608406 | MS.gene79332:intron | 45.0% |
| !! | ATAGTGGGTTTGGGAGGAAT+GGG | - | chr3.1:18608424-18608443 | MS.gene79332:intron | 45.0% |
| !! | ATTCTTCTTGGGGGTTTTGG+AGG | + | chr3.1:18610067-18610086 | None:intergenic | 45.0% |
| !! | CAGAGTGCTGAAGAGAAAAG+AGG | - | chr3.1:18609727-18609746 | MS.gene79332:intron | 45.0% |
| !! | GTGGATTTGCTGAAGAATGC+TGG | - | chr3.1:18610442-18610461 | MS.gene79332:intron | 45.0% |
| !!! | ACAAAGGTCGAGCTAGCTTT+TGG | - | chr3.1:18610858-18610877 | MS.gene79332:CDS | 45.0% |
| !!! | TTCTTCTTGGGGGTTTTGGA+GGG | + | chr3.1:18610066-18610085 | None:intergenic | 45.0% |
| !! | AAAAAATTTAACAAATTATT+AGG | + | chr3.1:18609701-18609720 | None:intergenic | 5.0% |
| !!! | AATAATTTGTTAAATTTTTT+TGG | - | chr3.1:18609701-18609720 | MS.gene79332:intron | 5.0% |
| AGACCTTGGCAATCAGCGAA+CGG | + | chr3.1:18609207-18609226 | None:intergenic | 50.0% | |
| AGTGGGCAAGGTCAATCAAG+CGG | - | chr3.1:18609893-18609912 | MS.gene79332:intron | 50.0% | |
| CAGGAGTCAATCTGGTGTGT+TGG | - | chr3.1:18610636-18610655 | MS.gene79332:intron | 50.0% | |
| CGTGACAACACGTGAAAAGG+AGG | - | chr3.1:18608747-18608766 | MS.gene79332:intron | 50.0% | |
| GATATGGGCAGGAGTCAATC+TGG | - | chr3.1:18610628-18610647 | MS.gene79332:intron | 50.0% | |
| GCCCAAAGATTTATGTCGGG+TGG | - | chr3.1:18609943-18609962 | MS.gene79332:intron | 50.0% | |
| GGAACGGGAATGCAGAATGT+TGG | - | chr3.1:18608674-18608693 | MS.gene79332:intron | 50.0% | |
| GGTCCTTGTGCTAGTAACGA+AGG | - | chr3.1:18608253-18608272 | MS.gene79332:intron | 50.0% | |
| GTACACAAGCTTAGCAAGGG+TGG | + | chr3.1:18608455-18608474 | None:intergenic | 50.0% | |
| TCTCTGCTTCTTCCAGCACA+TGG | + | chr3.1:18607973-18607992 | None:intergenic | 50.0% | |
| ! | CTAGTGGACAAGTGAAGGTG+TGG | - | chr3.1:18610698-18610717 | MS.gene79332:intron | 50.0% |
| ! | GTGAAGGTGTGGCCAAAGAA+AGG | - | chr3.1:18610709-18610728 | MS.gene79332:intron | 50.0% |
| ! | TTTCCGTTCGCTGATTGCCA+AGG | - | chr3.1:18609201-18609220 | MS.gene79332:CDS | 50.0% |
| !! | ATCAGCATAGTGGGTTTGGG+AGG | - | chr3.1:18608418-18608437 | MS.gene79332:intron | 50.0% |
| !! | CATAGTGGGTTTGGGAGGAA+TGG | - | chr3.1:18608423-18608442 | MS.gene79332:intron | 50.0% |
| GTTGTCGTCTACAGCTCTCG+TGG | - | chr3.1:18608303-18608322 | MS.gene79332:intron | 55.0% | |
| TGTCGGACCACCAGACATTG+TGG | - | chr3.1:18611055-18611074 | MS.gene79332:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 18607821 | 18611200 | 18607821 | ID=MS.gene79332 |
| chr3.1 | mRNA | 18607821 | 18611200 | 18607821 | ID=MS.gene79332.t1;Parent=MS.gene79332 |
| chr3.1 | exon | 18610742 | 18611200 | 18610742 | ID=MS.gene79332.t1.exon1;Parent=MS.gene79332.t1 |
| chr3.1 | CDS | 18610742 | 18611200 | 18610742 | ID=cds.MS.gene79332.t1;Parent=MS.gene79332.t1 |
| chr3.1 | exon | 18610253 | 18610393 | 18610253 | ID=MS.gene79332.t1.exon2;Parent=MS.gene79332.t1 |
| chr3.1 | CDS | 18610253 | 18610393 | 18610253 | ID=cds.MS.gene79332.t1;Parent=MS.gene79332.t1 |
| chr3.1 | exon | 18609191 | 18609291 | 18609191 | ID=MS.gene79332.t1.exon3;Parent=MS.gene79332.t1 |
| chr3.1 | CDS | 18609191 | 18609291 | 18609191 | ID=cds.MS.gene79332.t1;Parent=MS.gene79332.t1 |
| chr3.1 | exon | 18608898 | 18609118 | 18608898 | ID=MS.gene79332.t1.exon4;Parent=MS.gene79332.t1 |
| chr3.1 | CDS | 18608898 | 18609118 | 18608898 | ID=cds.MS.gene79332.t1;Parent=MS.gene79332.t1 |
| chr3.1 | exon | 18607821 | 18607849 | 18607821 | ID=MS.gene79332.t1.exon5;Parent=MS.gene79332.t1 |
| chr3.1 | CDS | 18607821 | 18607849 | 18607821 | ID=cds.MS.gene79332.t1;Parent=MS.gene79332.t1 |
| Gene Sequence |
| Protein sequence |
