AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060373


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060373.t1 MTR_4g118340 95.489 399 18 0 1 399 1 399 0.0 795
MS.gene060373.t1 MTR_2g020970 69.231 403 118 4 1 399 1 401 0.0 554
MS.gene060373.t1 MTR_2g020970 73.487 347 89 2 1 345 1 346 0.0 523
MS.gene060373.t1 MTR_6g087000 60.299 335 127 3 12 343 53 384 1.80e-136 413
MS.gene060373.t1 MTR_6g087000 60.299 335 127 3 12 343 53 384 6.46e-135 412
MS.gene060373.t1 MTR_8g017240 29.693 293 161 8 68 338 68 337 8.44e-32 124
MS.gene060373.t1 MTR_4g013295 28.421 285 159 6 68 325 60 326 8.00e-31 121
MS.gene060373.t1 MTR_7g070510 27.707 314 163 6 46 323 60 345 1.03e-30 122
MS.gene060373.t1 MTR_7g021530 30.976 297 143 6 68 322 70 346 1.51e-30 121
MS.gene060373.t1 MTR_7g021530 30.976 297 143 6 68 322 111 387 2.72e-30 121
MS.gene060373.t1 MTR_1g083690 29.032 279 157 6 68 323 71 331 1.70e-29 117
MS.gene060373.t1 MTR_7g021530 30.395 329 154 8 36 322 1 296 5.07e-29 116
MS.gene060373.t1 MTR_3g105730 31.970 269 139 10 86 350 43 271 5.58e-29 114
MS.gene060373.t1 MTR_7g080170 26.786 336 175 7 68 350 78 395 9.28e-29 117
MS.gene060373.t1 MTR_3g105730 30.547 311 167 11 44 350 28 293 1.03e-28 114
MS.gene060373.t1 MTR_2g435550 28.483 323 174 9 44 338 44 337 1.21e-28 115
MS.gene060373.t1 MTR_1g014640 32.331 266 137 10 86 350 108 331 1.21e-28 114
MS.gene060373.t1 MTR_1g013400 32.331 266 137 10 86 350 108 331 1.21e-28 114
MS.gene060373.t1 MTR_2g435550 28.527 319 175 8 44 336 58 349 2.22e-28 114
MS.gene060373.t1 MTR_2g435550 29.245 318 159 9 44 322 58 348 3.07e-28 114
MS.gene060373.t1 MTR_7g112490 26.557 305 172 6 68 338 73 359 8.85e-27 110
MS.gene060373.t1 MTR_7g112490 26.557 305 172 6 68 338 91 377 1.08e-26 110
MS.gene060373.t1 MTR_1g016620 28.125 256 143 6 68 301 51 287 1.09e-26 109
MS.gene060373.t1 MTR_4g120410 28.470 281 158 6 68 324 73 334 1.32e-26 109
MS.gene060373.t1 MTR_2g090190 26.923 312 172 7 68 342 73 365 1.90e-26 110
MS.gene060373.t1 MTR_7g021530 30.112 269 128 5 68 294 70 320 2.01e-26 108
MS.gene060373.t1 MTR_3g464650 28.472 288 148 12 66 341 74 315 2.07e-26 108
MS.gene060373.t1 MTR_7g021530 30.112 269 128 5 68 294 111 361 5.34e-26 108
MS.gene060373.t1 MTR_7g080170 29.675 246 150 6 110 350 60 287 2.90e-25 106
MS.gene060373.t1 MTR_4g037470 26.332 319 178 7 68 348 79 378 3.98e-25 107
MS.gene060373.t1 MTR_1g115570 31.102 254 132 10 86 339 126 336 6.03e-25 104
MS.gene060373.t1 MTR_3g464700 30.453 243 124 10 66 303 98 300 7.43e-25 104
MS.gene060373.t1 MTR_5g071550 29.181 281 149 12 69 341 137 375 1.41e-24 104
MS.gene060373.t1 MTR_4g037470 26.645 304 167 6 83 348 102 387 1.57e-24 105
MS.gene060373.t1 MTR_3g091060 29.304 273 152 9 69 340 108 340 9.18e-24 101
MS.gene060373.t1 MTR_4g116420 31.461 267 127 12 86 338 124 348 3.46e-23 100
MS.gene060373.t1 MTR_1g015110 26.220 328 161 12 49 341 263 544 5.10e-22 98.2
MS.gene060373.t1 MTR_5g024340 28.626 262 136 10 86 338 124 343 5.74e-22 97.1
MS.gene060373.t1 MTR_2g033000 27.957 279 140 9 86 345 100 336 4.18e-20 91.3
MS.gene060373.t1 MTR_4g125810 28.692 237 118 8 82 304 249 448 6.37e-20 92.0
MS.gene060373.t1 MTR_5g063940 25.298 336 194 13 7 341 3 282 1.31e-19 88.6
MS.gene060373.t1 MTR_4g094542 30.588 255 133 13 86 338 150 362 4.41e-19 88.2
MS.gene060373.t1 MTR_8g463130 27.451 255 144 9 86 339 66 280 2.01e-18 85.1
MS.gene060373.t1 MTR_1g086350 28.369 282 141 11 86 348 118 357 2.20e-18 86.7
MS.gene060373.t1 MTR_1g086350 28.369 282 141 11 86 348 102 341 2.29e-18 86.3
MS.gene060373.t1 MTR_8g463130 27.451 255 144 9 86 339 38 252 2.40e-18 84.3
MS.gene060373.t1 MTR_3g107880 28.679 265 135 10 86 338 63 285 3.91e-18 85.1
MS.gene060373.t1 MTR_3g107880 28.679 265 135 10 86 338 121 343 4.55e-18 85.5
MS.gene060373.t1 MTR_3g107880 28.679 265 135 10 86 338 120 342 4.69e-18 85.5
MS.gene060373.t1 MTR_4g123080 28.309 272 134 10 86 338 95 324 2.44e-17 83.2
MS.gene060373.t1 MTR_4g123080 28.309 272 134 10 86 338 113 342 3.03e-17 83.2
MS.gene060373.t1 MTR_1g086350 27.562 283 144 11 85 348 15 255 3.84e-17 81.6
MS.gene060373.t1 MTR_8g102550 25.912 274 151 8 85 341 151 389 4.08e-17 82.8
MS.gene060373.t1 MTR_3g105730 38.462 130 73 4 86 214 65 188 1.23e-16 79.0
MS.gene060373.t1 MTR_5g080680 26.255 259 134 9 66 304 112 333 3.65e-14 73.9
MS.gene060373.t1 MTR_1g071370 27.778 252 104 9 147 349 225 447 7.17e-14 73.9
MS.gene060373.t1 MTR_1g050520 27.972 286 158 11 69 344 401 648 9.11e-14 73.6
MS.gene060373.t1 MTR_7g029240 27.907 258 135 12 59 296 36 262 1.47e-12 69.3
MS.gene060373.t1 MTR_1g110210 28.041 296 151 14 66 340 43 297 2.55e-12 67.8
MS.gene060373.t1 MTR_7g112430 28.283 297 153 14 64 340 41 297 3.61e-12 67.8
MS.gene060373.t1 MTR_1g083750 28.896 308 147 17 59 340 36 297 4.14e-12 67.8
MS.gene060373.t1 MTR_0015s0140 25.191 262 150 11 76 313 69 308 4.02e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060373.t1 AT3G06270 68.588 347 107 1 1 345 1 347 3.28e-174 490
MS.gene060373.t1 AT2G20050 63.636 319 112 1 40 354 97 415 7.21e-140 426
MS.gene060373.t1 AT2G20050 63.636 319 112 1 40 354 97 415 8.37e-140 426
MS.gene060373.t1 AT5G26010 33.333 234 126 5 80 301 67 282 1.50e-32 125
MS.gene060373.t1 AT5G27930 27.273 297 172 6 68 338 74 352 9.82e-31 121
MS.gene060373.t1 AT5G27930 27.273 297 172 6 68 338 74 352 9.82e-31 121
MS.gene060373.t1 AT5G36250 27.628 333 173 7 68 350 80 394 1.22e-30 122
MS.gene060373.t1 AT5G10740 32.155 283 149 10 60 339 36 278 2.16e-29 117
MS.gene060373.t1 AT5G10740 32.155 283 149 10 60 339 36 278 2.16e-29 117
MS.gene060373.t1 AT4G31750 32.157 255 132 9 86 339 64 278 6.89e-29 115
MS.gene060373.t1 AT4G31750 32.157 255 132 9 86 339 64 278 8.56e-29 114
MS.gene060373.t1 AT4G31750 32.157 255 132 9 86 339 64 278 8.56e-29 114
MS.gene060373.t1 AT4G32950 30.496 282 167 9 68 340 55 316 8.62e-29 115
MS.gene060373.t1 AT3G05640 29.818 275 157 6 68 324 75 331 1.33e-28 115
MS.gene060373.t1 AT3G05640 29.818 275 157 6 68 324 75 331 1.33e-28 115
MS.gene060373.t1 AT3G05640 29.818 275 157 6 68 324 75 331 1.33e-28 115
MS.gene060373.t1 AT5G01700 26.733 303 167 6 68 340 11 288 5.50e-28 113
MS.gene060373.t1 AT4G03415 27.187 320 175 8 68 348 80 380 6.10e-28 115
MS.gene060373.t1 AT4G03415 27.187 320 175 8 68 348 80 380 6.10e-28 115
MS.gene060373.t1 AT4G03415 27.187 320 175 8 68 348 80 380 6.10e-28 115
MS.gene060373.t1 AT5G01700 26.733 303 167 6 68 340 60 337 8.55e-28 113
MS.gene060373.t1 AT5G24940 32.692 260 124 10 86 339 64 278 9.52e-28 114
MS.gene060373.t1 AT5G36250 26.513 347 173 8 68 350 80 408 2.67e-27 113
MS.gene060373.t1 AT1G16220 26.347 334 180 7 68 356 77 389 2.97e-26 110
MS.gene060373.t1 AT1G03590 27.974 311 169 8 68 342 73 364 5.25e-26 109
MS.gene060373.t1 AT5G27930 29.070 258 139 6 68 299 74 313 6.46e-26 107
MS.gene060373.t1 AT1G78200 29.492 295 164 13 49 341 31 283 1.69e-25 105
MS.gene060373.t1 AT1G78200 29.492 295 164 13 49 341 31 283 1.69e-25 105
MS.gene060373.t1 AT1G78200 29.492 295 164 13 49 341 31 283 1.69e-25 105
MS.gene060373.t1 AT5G36250 28.889 270 126 6 68 289 80 331 4.05e-25 105
MS.gene060373.t1 AT3G02750 29.091 275 164 7 110 379 177 425 1.23e-24 105
MS.gene060373.t1 AT3G02750 29.091 275 164 7 110 379 177 425 1.23e-24 105
MS.gene060373.t1 AT1G78200 30.597 268 145 12 76 341 10 238 2.83e-24 100
MS.gene060373.t1 AT1G78200 30.597 268 145 12 76 341 10 238 2.83e-24 100
MS.gene060373.t1 AT3G16800 27.241 290 174 6 68 338 75 346 5.37e-24 102
MS.gene060373.t1 AT3G16800 27.241 290 174 6 68 338 75 346 5.37e-24 102
MS.gene060373.t1 AT3G16800 27.241 290 174 6 68 338 75 346 5.37e-24 102
MS.gene060373.t1 AT3G51470 29.252 294 153 13 58 338 30 281 6.64e-24 101
MS.gene060373.t1 AT5G53140 28.016 257 144 9 86 341 132 348 7.05e-24 102
MS.gene060373.t1 AT5G53140 28.016 257 144 9 86 341 132 348 7.05e-24 102
MS.gene060373.t1 AT3G51470 29.252 294 153 13 58 338 74 325 1.11e-23 101
MS.gene060373.t1 AT4G32950 33.188 229 126 8 68 289 55 263 1.47e-23 99.8
MS.gene060373.t1 AT1G07160 28.470 281 152 9 69 340 136 376 3.53e-23 100
MS.gene060373.t1 AT1G79630 30.000 200 119 4 142 338 216 397 2.07e-22 99.4
MS.gene060373.t1 AT1G79630 30.000 200 119 4 142 338 212 393 2.09e-22 99.4
MS.gene060373.t1 AT1G79630 30.000 200 119 4 142 338 146 327 2.21e-22 98.6
MS.gene060373.t1 AT1G79630 30.000 200 119 4 142 338 146 327 2.21e-22 98.6
MS.gene060373.t1 AT1G79630 30.000 200 119 4 142 338 106 287 2.82e-22 97.8
MS.gene060373.t1 AT1G79630 30.000 200 119 4 142 338 106 287 2.82e-22 97.8
MS.gene060373.t1 AT1G79630 30.000 200 119 4 142 338 106 287 2.82e-22 97.8
MS.gene060373.t1 AT1G79630 30.000 200 119 4 142 338 106 287 2.82e-22 97.8
MS.gene060373.t1 AT3G16800 27.509 269 158 6 89 338 1 251 2.88e-22 95.5
MS.gene060373.t1 AT3G16800 27.509 269 158 6 89 338 1 251 2.88e-22 95.5
MS.gene060373.t1 AT1G43900 28.467 274 154 9 69 341 137 369 2.18e-21 95.1
MS.gene060373.t1 AT2G40180 30.545 275 135 13 80 341 155 386 3.29e-19 89.0
MS.gene060373.t1 AT3G02750 28.188 298 172 10 110 379 177 460 4.13e-19 89.7
MS.gene060373.t1 AT1G17550 26.557 305 142 13 84 342 235 503 1.01e-18 88.2
MS.gene060373.t1 AT1G17550 26.557 305 142 13 84 342 235 503 1.01e-18 88.2
MS.gene060373.t1 AT1G72770 26.885 305 138 11 85 342 237 503 1.19e-18 88.2
MS.gene060373.t1 AT1G72770 26.885 305 138 11 85 342 237 503 1.19e-18 88.2
MS.gene060373.t1 AT1G72770 26.885 305 138 11 85 342 237 503 1.19e-18 88.2
MS.gene060373.t1 AT1G34750 26.966 267 153 11 76 341 57 282 1.24e-18 85.9
MS.gene060373.t1 AT1G34750 26.966 267 153 11 76 341 57 282 1.24e-18 85.9
MS.gene060373.t1 AT1G34750 26.966 267 153 11 76 341 57 282 1.24e-18 85.9
MS.gene060373.t1 AT3G15260 27.132 258 145 9 86 341 73 289 1.98e-18 85.5
MS.gene060373.t1 AT3G15260 27.132 258 145 9 86 341 73 289 1.98e-18 85.5
MS.gene060373.t1 AT1G22280 25.681 257 150 9 86 341 65 281 2.42e-18 85.1
MS.gene060373.t1 AT2G30020 27.972 286 148 11 69 341 153 393 2.79e-18 86.3
MS.gene060373.t1 AT2G20630 26.848 257 147 9 86 341 63 279 3.74e-18 84.3
MS.gene060373.t1 AT2G33700 27.037 270 146 9 78 338 115 342 6.94e-18 85.1
MS.gene060373.t1 AT4G28400 27.059 255 145 9 86 339 45 259 1.81e-17 82.0
MS.gene060373.t1 AT4G28400 27.059 255 145 9 86 339 67 281 1.86e-17 82.4
MS.gene060373.t1 AT2G20630 26.877 253 144 9 86 337 63 275 2.79e-17 82.0
MS.gene060373.t1 AT3G17250 26.812 276 137 10 86 338 158 391 1.24e-16 81.6
MS.gene060373.t1 AT1G09160 31.788 302 146 19 59 340 36 297 1.50e-16 81.3
MS.gene060373.t1 AT1G09160 31.788 302 146 19 59 340 36 297 1.50e-16 81.3
MS.gene060373.t1 AT1G22280 25.475 263 149 10 86 341 65 287 1.72e-16 79.7
MS.gene060373.t1 AT5G51760 29.412 255 118 8 75 302 103 322 2.25e-16 80.5
MS.gene060373.t1 AT5G51760 29.412 255 118 8 75 302 133 352 2.32e-16 80.9
MS.gene060373.t1 AT2G34740 25.000 272 161 10 69 338 102 332 1.57e-15 77.4
MS.gene060373.t1 AT2G29380 25.952 289 144 13 85 341 111 361 9.37e-15 75.5
MS.gene060373.t1 AT1G68410 30.928 291 149 15 66 340 48 302 5.60e-14 73.6
MS.gene060373.t1 AT1G68410 30.928 291 149 15 66 340 48 302 5.60e-14 73.6
MS.gene060373.t1 AT1G68410 30.928 291 149 15 66 340 48 302 5.60e-14 73.6
MS.gene060373.t1 AT1G68410 30.928 291 149 15 66 340 48 302 5.60e-14 73.6
MS.gene060373.t1 AT3G11410 27.347 245 117 11 83 302 134 342 2.27e-13 71.6
MS.gene060373.t1 AT2G34740 26.222 225 128 9 69 291 116 304 1.74e-12 68.2
MS.gene060373.t1 AT2G34740 26.222 225 128 9 69 291 98 286 2.15e-12 67.8
MS.gene060373.t1 AT1G72770 32.026 153 70 6 85 209 237 383 4.14e-12 67.8
MS.gene060373.t1 AT1G72770 32.026 153 70 6 85 209 237 383 4.14e-12 67.8
MS.gene060373.t1 AT1G47380 26.846 298 170 14 66 349 39 302 5.19e-11 64.3

Find 96 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATCATTGTCCAGATTAA+AGG 0.182707 8.4:-13024507 MS.gene060373:CDS
TTACCCCAGTGTTGGATATT+TGG 0.226477 8.4:+13025827 None:intergenic
ACAGGATCCTTCACCAATTC+AGG 0.227180 8.4:+13026139 None:intergenic
CTGCATTTACAAGGAGTTTA+GGG 0.266150 8.4:-13025742 MS.gene060373:CDS
AGCTTACAATTCTGCGTTCT+CGG 0.277270 8.4:-13026113 MS.gene060373:CDS
ACTGCATTTACAAGGAGTTT+AGG 0.296176 8.4:-13025743 MS.gene060373:CDS
AACCCGAATACCCATTTCTT+TGG 0.309531 8.4:-13026244 MS.gene060373:CDS
ACACCAAAGAAATGGGTATT+CGG 0.310857 8.4:+13026241 None:intergenic
TTCCCAAATGGGATGTTTCC+TGG 0.311843 8.4:-13025767 MS.gene060373:CDS
TATTAGAGAGTCCTTTAATC+TGG 0.331443 8.4:+13024496 None:intergenic
TGATCAAGTGGAAGGGATTA+AGG 0.333034 8.4:-13025852 MS.gene060373:CDS
TTTGATGGGCATGGTCAATT+TGG 0.349419 8.4:-13026217 MS.gene060373:CDS
TTCTTTATTGTTGCTAGTGA+TGG 0.360065 8.4:-13025644 MS.gene060373:CDS
AAGAGCTGTGATAGCTGTTA+AGG 0.361637 8.4:-13025978 MS.gene060373:CDS
CACCAAAGAAATGGGTATTC+GGG 0.365530 8.4:+13026242 None:intergenic
GTTCCAGGAAACATCCCATT+TGG 0.370982 8.4:+13025764 None:intergenic
CACCGACATTAGCAACATAA+AGG 0.371740 8.4:+13026005 None:intergenic
CTCCTTGTAAATGCAGTTCC+AGG 0.374803 8.4:+13025749 None:intergenic
GTTCAAACTTTGTTAGAGAT+AGG 0.377026 8.4:-13026186 MS.gene060373:CDS
ACATTGTAGTCAAGCACATC+TGG 0.378787 8.4:-13023981 MS.gene060373:intron
AAGCCAAACTGTTGTTGATA+TGG 0.388203 8.4:-13025603 MS.gene060373:intron
TGAAACATGGGTTGTGTTCA+TGG 0.388527 8.4:-13026490 None:intergenic
ACAATAAAGAAGAGATGATT+AGG 0.391372 8.4:+13025656 None:intergenic
AAGGAGTTTAGGGGATAGAT+TGG 0.411034 8.4:-13025732 MS.gene060373:CDS
GTTATCTAACGACCCTGAAT+TGG 0.416488 8.4:-13026152 MS.gene060373:CDS
GAGCATGTATGTTCTTCCTA+TGG 0.417871 8.4:+13026407 None:intergenic
CCTCCGATCAGACACCATTT+CGG 0.418476 8.4:-13025925 MS.gene060373:CDS
CGAGATTGTGGTTCCCAAAT+GGG 0.427237 8.4:-13025778 MS.gene060373:CDS
TACGAGAGAGTGAAACTTTG+TGG 0.431653 8.4:-13025893 MS.gene060373:CDS
CCGAGATTGTGGTTCCCAAA+TGG 0.432081 8.4:-13025779 MS.gene060373:CDS
GCTATTACAGTGCTTGTTGT+TGG 0.438993 8.4:-13026034 MS.gene060373:CDS
TCAACTGATCTTTGACTGGC+AGG 0.446192 8.4:+13023833 None:intergenic
TTCCAGGAAACATCCCATTT+GGG 0.447799 8.4:+13025765 None:intergenic
ATACCATATCAACAACAGTT+TGG 0.450437 8.4:+13025600 None:intergenic
GATAGATTGGCGGAGACAAT+TGG 0.474209 8.4:-13025719 MS.gene060373:CDS
CTGGGGTAACGAAGAGAGTT+GGG 0.475410 8.4:-13025813 MS.gene060373:CDS
TCGTATTCATCTCTCCGAAA+TGG 0.490543 8.4:+13025911 None:intergenic
TTCCTGGAACTGCATTTACA+AGG 0.492066 8.4:-13025751 MS.gene060373:CDS
TGCATTAGGACGGAAATTCA+AGG 0.496046 8.4:-13026268 MS.gene060373:CDS
AGAGCTGTGATAGCTGTTAA+GGG 0.501730 8.4:-13025977 MS.gene060373:CDS
ACCGACATTAGCAACATAAA+GGG 0.501992 8.4:+13026006 None:intergenic
GCAGAATTGTAAGCTCGAAC+AGG 0.504003 8.4:+13026121 None:intergenic
AAACTTTGTTAGAGATAGGT+TGG 0.504480 8.4:-13026182 MS.gene060373:CDS
AGCTGAACTATTGACACCTC+TGG 0.506076 8.4:+13025683 None:intergenic
GAGTGAAACTTTGTGGAGCA+AGG 0.507109 8.4:-13025886 MS.gene060373:CDS
TTATTCAACTGATCTTTGAC+TGG 0.530616 8.4:+13023829 None:intergenic
CATCTCAGAAGTTCCTGTCC+TGG 0.530672 8.4:+13023917 None:intergenic
ACTGGGGTAACGAAGAGAGT+TGG 0.535227 8.4:-13025814 MS.gene060373:CDS
GATGGCGGCTCTAGAAAACT+TGG 0.535769 8.4:-13026442 MS.gene060373:CDS
GTAACCTCGCAGTGTGAGAA+AGG 0.536584 8.4:+13026330 None:intergenic
AGGTTACTACCCTGATTCGC+TGG 0.540706 8.4:-13026314 MS.gene060373:CDS
TGTGATAGCTGTTAAGGGTG+GGG 0.542620 8.4:-13025972 MS.gene060373:CDS
CCATTTGGGAACCACAATCT+CGG 0.544156 8.4:+13025779 None:intergenic
CTGTGATAGCTGTTAAGGGT+GGG 0.544181 8.4:-13025973 MS.gene060373:CDS
ACCCTTTATGTTGCTAATGT+CGG 0.544876 8.4:-13026007 MS.gene060373:CDS
AGGATCCAAATATCCAACAC+TGG 0.555282 8.4:-13025832 MS.gene060373:CDS
TCTCCGAAATGGTGTCTGAT+CGG 0.558732 8.4:+13025922 None:intergenic
GAGTTTAGGGGATAGATTGG+CGG 0.561902 8.4:-13025729 MS.gene060373:CDS
TCTCTTCGTTACCCCAGTGT+TGG 0.563931 8.4:+13025819 None:intergenic
GGATCCAAATATCCAACACT+GGG 0.565827 8.4:-13025831 MS.gene060373:CDS
TTGGTTATCATCATAGCCAT+AGG 0.581172 8.4:-13026423 MS.gene060373:CDS
GGGTGGGGATCGGATTATTG+CGG 0.585455 8.4:-13025957 MS.gene060373:CDS
TCCAAAACAAAATTGTGTGA+AGG 0.592993 8.4:+13026358 None:intergenic
AGTGAAACTTTGTGGAGCAA+GGG 0.598564 8.4:-13025885 MS.gene060373:CDS
CAGGATCCTTCACCAATTCA+GGG 0.602285 8.4:+13026140 None:intergenic
TTTGCTTATCCAGCGAATCA+GGG 0.607172 8.4:+13026305 None:intergenic
GCTGTGATAGCTGTTAAGGG+TGG 0.610038 8.4:-13025974 MS.gene060373:CDS
CAATTAAGTGAGGTCAATGT+CGG 0.610601 8.4:-13023954 MS.gene060373:CDS
TTGAGTGTTGATCAAGTGGA+AGG 0.612271 8.4:-13025860 MS.gene060373:CDS
TAACGACCCTGAATTGGTGA+AGG 0.614068 8.4:-13026146 MS.gene060373:CDS
ATGATAAACATCAAATTCAG+TGG 0.614811 8.4:+13023887 None:intergenic
TGCATTTACAAGGAGTTTAG+GGG 0.615174 8.4:-13025741 MS.gene060373:CDS
TCGGTACTGCTATGAGAACC+AGG 0.619300 8.4:-13023935 MS.gene060373:CDS
AGAGTCATATAAACTGTGGT+CGG 0.621691 8.4:-13024559 MS.gene060373:CDS
TAGCTGTTAAGGGTGGGGAT+CGG 0.622651 8.4:-13025967 MS.gene060373:CDS
GGTGTTGAGTGTTGATCAAG+TGG 0.623023 8.4:-13025864 MS.gene060373:CDS
ATGTTGCTGTGTGAAATCTT+CGG 0.625984 8.4:-13026464 MS.gene060373:CDS
CCGAAATGGTGTCTGATCGG+AGG 0.627091 8.4:+13025925 None:intergenic
ACTGCTATGAGAACCAGGAC+AGG 0.627745 8.4:-13023930 MS.gene060373:CDS
TGCTGTGTGAAATCTTCGGA+TGG 0.628217 8.4:-13026460 MS.gene060373:CDS
AGATCCTCGTGATGCATGTG+CGG 0.629182 8.4:-13024592 MS.gene060373:CDS
GACATTGATGATTCTATGAG+TGG 0.646804 8.4:-13026064 MS.gene060373:CDS
TGAGTGTTGATCAAGTGGAA+GGG 0.646966 8.4:-13025859 MS.gene060373:CDS
ATGGTGATCCTCCGAGATTG+TGG 0.650626 8.4:-13025790 MS.gene060373:CDS
TGGGGATCGGATTATTGCGG+AGG 0.654548 8.4:-13025954 MS.gene060373:CDS
GGTAACGAAGAGAGTTGGGA+TGG 0.656385 8.4:-13025809 MS.gene060373:CDS
TGATTCTATGAGTGGTACAA+CGG 0.665201 8.4:-13026056 MS.gene060373:CDS
ATCTGGAGTTCAATTAAGTG+AGG 0.669700 8.4:-13023964 MS.gene060373:CDS
CTGAAGAGTCATATAAACTG+TGG 0.672383 8.4:-13024563 MS.gene060373:CDS
TGGTGTGGTTGCAACTCCAG+AGG 0.684152 8.4:-13025699 MS.gene060373:CDS
TATACCTTTCTCACACTGCG+AGG 0.685306 8.4:-13026334 MS.gene060373:CDS
TGTGTGAAATCTTCGGATGG+CGG 0.698876 8.4:-13026457 MS.gene060373:CDS
ATAGCCGCACATGCATCACG+AGG 0.723344 8.4:+13024588 None:intergenic
ATTGGCGGAGACAATTGGTG+TGG 0.737589 8.4:-13025714 MS.gene060373:CDS
TTTGGGAACCACAATCTCGG+AGG 0.737719 8.4:+13025782 None:intergenic
GATCCAAATATCCAACACTG+GGG 0.772205 8.4:-13025830 MS.gene060373:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAATAGAAATTATATAT+TGG - chr8.4:13026072-13026091 MS.gene060373:CDS 10.0%
!! TATCAATTATAAAGTAAAAT+TGG + chr8.4:13025189-13025208 None:intergenic 10.0%
!!! CAATATATAATTTCTATTTT+TGG + chr8.4:13026074-13026093 None:intergenic 10.0%
!!! TTTTAGATTTGTATTATTAA+TGG - chr8.4:13025923-13025942 MS.gene060373:CDS 10.0%
!! AAGTTAATACAAATGATAAA+TGG + chr8.4:13025433-13025452 None:intergenic 15.0%
!! ATTATAAAGTAAAATTGGAA+TGG + chr8.4:13025184-13025203 None:intergenic 15.0%
!! ATTTCTAATAAGTAGATAAT+AGG + chr8.4:13024994-13025013 None:intergenic 15.0%
!!! TTATCATTTGTATTAACTTT+TGG - chr8.4:13025434-13025453 MS.gene060373:intron 15.0%
!! AAAAAAATTCCTAAAGTCTA+TGG + chr8.4:13026023-13026042 None:intergenic 20.0%
!! ATATATATATATATCCCCAT+GGG - chr8.4:13025240-13025259 MS.gene060373:intron 20.0%
!! CATTTAGATAATATCATCTT+AGG - chr8.4:13024938-13024957 MS.gene060373:intron 20.0%
!! TAGAAAAAAAAAACTAAGAG+AGG + chr8.4:13024752-13024771 None:intergenic 20.0%
!! TATATATATATATATCCCCA+TGG - chr8.4:13025239-13025258 MS.gene060373:intron 20.0%
!!! CTAAAATTTTAAAACAAGCT+TGG + chr8.4:13025909-13025928 None:intergenic 20.0%
!!! GAAGAAAAATCTTTACATTT+TGG - chr8.4:13024880-13024899 MS.gene060373:intron 20.0%
!!! TCAATAAATACTTGCTATTT+GGG - chr8.4:13026140-13026159 MS.gene060373:CDS 20.0%
! AACTACACATAAAAGGAAAA+TGG + chr8.4:13025883-13025902 None:intergenic 25.0%
! AATTGTTTGTCACAATCATA+TGG - chr8.4:13025362-13025381 MS.gene060373:intron 25.0%
! AATTTGAATCAACTCATCAT+TGG - chr8.4:13026285-13026304 MS.gene060373:CDS 25.0%
! ACAATAAAGAAGAGATGATT+AGG + chr8.4:13024664-13024683 None:intergenic 25.0%
! ACATATTCATCAAGATAAGA+AGG + chr8.4:13025672-13025691 None:intergenic 25.0%
! ATATTCATCAAGATAAGAAG+GGG + chr8.4:13025670-13025689 None:intergenic 25.0%
! ATCAAAAACACCAAAGAAAT+GGG + chr8.4:13024086-13024105 None:intergenic 25.0%
! ATGATAAACATCAAATTCAG+TGG + chr8.4:13026433-13026452 None:intergenic 25.0%
! ATTATCATTGTCCAGATTAA+AGG - chr8.4:13025810-13025829 MS.gene060373:CDS 25.0%
! ATTGTTTGTCACAATCATAT+GGG - chr8.4:13025363-13025382 MS.gene060373:intron 25.0%
! CATATTCATCAAGATAAGAA+GGG + chr8.4:13025671-13025690 None:intergenic 25.0%
! GCAATTATGTTAATGGTTTA+TGG - chr8.4:13025094-13025113 MS.gene060373:intron 25.0%
! GTAATATACAAACATAGGTT+AGG - chr8.4:13025263-13025282 MS.gene060373:intron 25.0%
! GTTAATGGTTTATGGTTATT+CGG - chr8.4:13025102-13025121 MS.gene060373:intron 25.0%
! TAACTTCCAATTAAACGAAT+TGG + chr8.4:13025510-13025529 None:intergenic 25.0%
! TATATATATATATCCCCATG+GGG - chr8.4:13025241-13025260 MS.gene060373:intron 25.0%
!! CTCTACATGTTTTTCTTTTT+GGG + chr8.4:13026206-13026225 None:intergenic 25.0%
!! TAAAAGGAAAATGGTAATGA+AGG + chr8.4:13025874-13025893 None:intergenic 25.0%
!!! AGATAATACCTTGTTTTTCA+TGG + chr8.4:13025960-13025979 None:intergenic 25.0%
!!! ATTTCTTTGGTGTTTTTGAT+GGG - chr8.4:13024086-13024105 MS.gene060373:intron 25.0%
!!! CAATAAATACTTGCTATTTG+GGG - chr8.4:13026141-13026160 MS.gene060373:CDS 25.0%
!!! CTCAATAAATACTTGCTATT+TGG - chr8.4:13026139-13026158 MS.gene060373:CDS 25.0%
!!! GATAATACCTTGTTTTTCAT+GGG + chr8.4:13025959-13025978 None:intergenic 25.0%
!!! TGTGTTTTATTTGATTCTGT+AGG - chr8.4:13025689-13025708 MS.gene060373:CDS 25.0%
AAACTTTGTTAGAGATAGGT+TGG - chr8.4:13024135-13024154 MS.gene060373:intron 30.0%
AACCATAGTTATGCTAAACA+AGG + chr8.4:13025291-13025310 None:intergenic 30.0%
AAGGACTCTCTAATAATGTA+TGG - chr8.4:13025829-13025848 MS.gene060373:CDS 30.0%
AATATATTTGCACAACTACC+TGG + chr8.4:13025320-13025339 None:intergenic 30.0%
AATTGGAATGGTATTTAGCT+TGG + chr8.4:13025172-13025191 None:intergenic 30.0%
ATAACTATGGTTCATTTACC+AGG - chr8.4:13025299-13025318 MS.gene060373:intron 30.0%
ATACCATATCAACAACAGTT+TGG + chr8.4:13024720-13024739 None:intergenic 30.0%
ATGGGGTAATATACAAACAT+AGG - chr8.4:13025258-13025277 MS.gene060373:intron 30.0%
ATGTTTGTATATTACCCCAT+GGG + chr8.4:13025258-13025277 None:intergenic 30.0%
ATTAATCAAAGTTATTCCCC+TGG + chr8.4:13025995-13026014 None:intergenic 30.0%
CAAAATCAAAATCTTGCTAC+TGG - chr8.4:13026253-13026272 MS.gene060373:CDS 30.0%
CAATTGCCAATTCGTTTAAT+TGG - chr8.4:13025501-13025520 MS.gene060373:intron 30.0%
CATCAAAAACACCAAAGAAA+TGG + chr8.4:13024087-13024106 None:intergenic 30.0%
CCAAATTCCATCTGTTAATT+AGG - chr8.4:13025402-13025421 MS.gene060373:intron 30.0%
CCTAATTAACAGATGGAATT+TGG + chr8.4:13025405-13025424 None:intergenic 30.0%
GAAATCGTATCATCTATCAA+TGG - chr8.4:13025009-13025028 MS.gene060373:intron 30.0%
GTTCAAACTTTGTTAGAGAT+AGG - chr8.4:13024131-13024150 MS.gene060373:intron 30.0%
TAATTCACTCCATAGACTTT+AGG - chr8.4:13026011-13026030 MS.gene060373:CDS 30.0%
TATGTTTGTATATTACCCCA+TGG + chr8.4:13025259-13025278 None:intergenic 30.0%
TATTAGAGAGTCCTTTAATC+TGG + chr8.4:13025824-13025843 None:intergenic 30.0%
TCCAAAACAAAATTGTGTGA+AGG + chr8.4:13023962-13023981 None:intergenic 30.0%
TCCTAATGCAAAAACTATCT+TGG + chr8.4:13024039-13024058 None:intergenic 30.0%
TCTGTGTGCAATTATGTTAA+TGG - chr8.4:13025087-13025106 MS.gene060373:intron 30.0%
TTCTTATCCCATGAAAAACA+AGG - chr8.4:13025949-13025968 MS.gene060373:CDS 30.0%
TTCTTTATTGTTGCTAGTGA+TGG - chr8.4:13024673-13024692 MS.gene060373:intron 30.0%
TTGGAGAAACTACACATAAA+AGG + chr8.4:13025890-13025909 None:intergenic 30.0%
! AAGGTATTATCTCATCAAAG+GGG - chr8.4:13025968-13025987 MS.gene060373:CDS 30.0%
! ACAAGGTATTATCTCATCAA+AGG - chr8.4:13025966-13025985 MS.gene060373:CDS 30.0%
! ACCAAGATAGTTTTTGCATT+AGG - chr8.4:13024035-13024054 MS.gene060373:intron 30.0%
! AGATAGTTTTTGCATTAGGA+CGG - chr8.4:13024039-13024058 MS.gene060373:intron 30.0%
! CAAGGTATTATCTCATCAAA+GGG - chr8.4:13025967-13025986 MS.gene060373:CDS 30.0%
! GCTCTACATGTTTTTCTTTT+TGG + chr8.4:13026207-13026226 None:intergenic 30.0%
! TTCCTTGTTTAGCATAACTA+TGG - chr8.4:13025286-13025305 MS.gene060373:intron 30.0%
!! AAGACTTTGACTTGAAAATC+AGG - chr8.4:13025049-13025068 MS.gene060373:intron 30.0%
!! TCCTTCACACAATTTTGTTT+TGG - chr8.4:13023958-13023977 MS.gene060373:CDS 30.0%
!! TTACATTTTGGCCACAATTA+TGG - chr8.4:13024892-13024911 MS.gene060373:intron 30.0%
!!! ACTGTGTAGAATTTTAACTC+TGG - chr8.4:13025637-13025656 MS.gene060373:CDS 30.0%
!!! CATTTCTTTGGTGTTTTTGA+TGG - chr8.4:13024085-13024104 MS.gene060373:intron 30.0%
AAGCCAAACTGTTGTTGATA+TGG - chr8.4:13024714-13024733 MS.gene060373:intron 35.0%
AATCCTTAACATGTGTCCTT+AGG - chr8.4:13026164-13026183 MS.gene060373:CDS 35.0%
ACACCAAAGAAATGGGTATT+CGG + chr8.4:13024079-13024098 None:intergenic 35.0%
ACCCTTTATGTTGCTAATGT+CGG - chr8.4:13024310-13024329 MS.gene060373:intron 35.0%
ACCGACATTAGCAACATAAA+GGG + chr8.4:13024314-13024333 None:intergenic 35.0%
ACTGCATTTACAAGGAGTTT+AGG - chr8.4:13024574-13024593 MS.gene060373:CDS 35.0%
AGAGTCATATAAACTGTGGT+CGG - chr8.4:13025758-13025777 MS.gene060373:CDS 35.0%
AGGTATTATCTCATCAAAGG+GGG - chr8.4:13025969-13025988 MS.gene060373:CDS 35.0%
ATCCTTAACATGTGTCCTTA+GGG - chr8.4:13026165-13026184 MS.gene060373:CDS 35.0%
ATGTTGCTGTGTGAAATCTT+CGG - chr8.4:13023853-13023872 MS.gene060373:CDS 35.0%
CAATTAAGTGAGGTCAATGT+CGG - chr8.4:13026363-13026382 MS.gene060373:CDS 35.0%
CTGAAGAGTCATATAAACTG+TGG - chr8.4:13025754-13025773 MS.gene060373:CDS 35.0%
CTGCATTTACAAGGAGTTTA+GGG - chr8.4:13024575-13024594 MS.gene060373:CDS 35.0%
GGATAGACCTAATTAACAGA+TGG + chr8.4:13025412-13025431 None:intergenic 35.0%
GTTGATATTGTGAATGACTG+TGG - chr8.4:13024812-13024831 MS.gene060373:intron 35.0%
TGATTCTATGAGTGGTACAA+CGG - chr8.4:13024261-13024280 MS.gene060373:intron 35.0%
TGCATTTACAAGGAGTTTAG+GGG - chr8.4:13024576-13024595 MS.gene060373:CDS 35.0%
TGTTTGTATATTACCCCATG+GGG + chr8.4:13025257-13025276 None:intergenic 35.0%
TTGGTTATCATCATAGCCAT+AGG - chr8.4:13023894-13023913 MS.gene060373:CDS 35.0%
! ATCTGGAGTTCAATTAAGTG+AGG - chr8.4:13026353-13026372 MS.gene060373:CDS 35.0%
! GACATTGATGATTCTATGAG+TGG - chr8.4:13024253-13024272 MS.gene060373:intron 35.0%
! TTTGGCCACAATTATGGTTT+TGG - chr8.4:13024898-13024917 MS.gene060373:intron 35.0%
!!! TGTAGAATTTTAACTCTGGC+AGG - chr8.4:13025641-13025660 MS.gene060373:CDS 35.0%
AACCCGAATACCCATTTCTT+TGG - chr8.4:13024073-13024092 MS.gene060373:intron 40.0%
AAGAGCTGTGATAGCTGTTA+AGG - chr8.4:13024339-13024358 MS.gene060373:intron 40.0%
AAGGAGTTTAGGGGATAGAT+TGG - chr8.4:13024585-13024604 MS.gene060373:CDS 40.0%
ACATTGTAGTCAAGCACATC+TGG - chr8.4:13026336-13026355 MS.gene060373:CDS 40.0%
AGAGCTGTGATAGCTGTTAA+GGG - chr8.4:13024340-13024359 MS.gene060373:intron 40.0%
AGCTTACAATTCTGCGTTCT+CGG - chr8.4:13024204-13024223 MS.gene060373:intron 40.0%
AGGATCCAAATATCCAACAC+TGG - chr8.4:13024485-13024504 MS.gene060373:intron 40.0%
AGTGAAACTTTGTGGAGCAA+GGG - chr8.4:13024432-13024451 MS.gene060373:intron 40.0%
AGTGTCTACAGTATTGCAAC+GGG + chr8.4:13025588-13025607 None:intergenic 40.0%
ATTCTACACAGTAATGCAGC+AGG + chr8.4:13025629-13025648 None:intergenic 40.0%
CACCAAAGAAATGGGTATTC+GGG + chr8.4:13024078-13024097 None:intergenic 40.0%
CACCGACATTAGCAACATAA+AGG + chr8.4:13024315-13024334 None:intergenic 40.0%
CAGTGTCTACAGTATTGCAA+CGG + chr8.4:13025589-13025608 None:intergenic 40.0%
GAGCATGTATGTTCTTCCTA+TGG + chr8.4:13023913-13023932 None:intergenic 40.0%
GATCCAAATATCCAACACTG+GGG - chr8.4:13024487-13024506 MS.gene060373:intron 40.0%
GCAGTCCAAAACCATAATTG+TGG + chr8.4:13024906-13024925 None:intergenic 40.0%
GGATCCAAATATCCAACACT+GGG - chr8.4:13024486-13024505 MS.gene060373:intron 40.0%
GTTATCTAACGACCCTGAAT+TGG - chr8.4:13024165-13024184 MS.gene060373:intron 40.0%
TACGAGAGAGTGAAACTTTG+TGG - chr8.4:13024424-13024443 MS.gene060373:intron 40.0%
TCGTATTCATCTCTCCGAAA+TGG + chr8.4:13024409-13024428 None:intergenic 40.0%
TGATCAAGTGGAAGGGATTA+AGG - chr8.4:13024465-13024484 MS.gene060373:intron 40.0%
TGCATTAGGACGGAAATTCA+AGG - chr8.4:13024049-13024068 MS.gene060373:intron 40.0%
TGTCTGATGCTGCCAAATTA+TGG - chr8.4:13024842-13024861 MS.gene060373:intron 40.0%
TTCCAGGAAACATCCCATTT+GGG + chr8.4:13024555-13024574 None:intergenic 40.0%
TTCCTGGAACTGCATTTACA+AGG - chr8.4:13024566-13024585 MS.gene060373:CDS 40.0%
TTCTACACAGTAATGCAGCA+GGG + chr8.4:13025628-13025647 None:intergenic 40.0%
TTGTGAATGACTGTGGACAA+AGG - chr8.4:13024819-13024838 MS.gene060373:intron 40.0%
TTTGCTTATCCAGCGAATCA+GGG + chr8.4:13024015-13024034 None:intergenic 40.0%
! TTACCCCAGTGTTGGATATT+TGG + chr8.4:13024493-13024512 None:intergenic 40.0%
! TTTGATGGGCATGGTCAATT+TGG - chr8.4:13024100-13024119 MS.gene060373:intron 40.0%
! TTTTGCTTATCCAGCGAATC+AGG + chr8.4:13024016-13024035 None:intergenic 40.0%
!! GCTATTACAGTGCTTGTTGT+TGG - chr8.4:13024283-13024302 MS.gene060373:intron 40.0%
!! TACAGTATTGCAACGGGTTA+GGG + chr8.4:13025582-13025601 None:intergenic 40.0%
!! TGAGTGTTGATCAAGTGGAA+GGG - chr8.4:13024458-13024477 MS.gene060373:intron 40.0%
!! TTGAGTGTTGATCAAGTGGA+AGG - chr8.4:13024457-13024476 MS.gene060373:intron 40.0%
!!! TTTGGTGTTTTTGATGGGCA+TGG - chr8.4:13024091-13024110 MS.gene060373:intron 40.0%
ACAGGATCCTTCACCAATTC+AGG + chr8.4:13024181-13024200 None:intergenic 45.0%
ACCACACCACAGCCATAATT+TGG + chr8.4:13024857-13024876 None:intergenic 45.0%
AGCCCTAAGGACACATGTTA+AGG + chr8.4:13026170-13026189 None:intergenic 45.0%
AGCTGAACTATTGACACCTC+TGG + chr8.4:13024637-13024656 None:intergenic 45.0%
ATGCTGCCAAATTATGGCTG+TGG - chr8.4:13024848-13024867 MS.gene060373:intron 45.0%
CAGGATCCTTCACCAATTCA+GGG + chr8.4:13024180-13024199 None:intergenic 45.0%
CCATTTGGGAACCACAATCT+CGG + chr8.4:13024541-13024560 None:intergenic 45.0%
CGAGATTGTGGTTCCCAAAT+GGG - chr8.4:13024539-13024558 MS.gene060373:CDS 45.0%
CTCCTTGTAAATGCAGTTCC+AGG + chr8.4:13024571-13024590 None:intergenic 45.0%
CTGTGATAGCTGTTAAGGGT+GGG - chr8.4:13024344-13024363 MS.gene060373:intron 45.0%
GAGTGAAACTTTGTGGAGCA+AGG - chr8.4:13024431-13024450 MS.gene060373:intron 45.0%
GAGTTTAGGGGATAGATTGG+CGG - chr8.4:13024588-13024607 MS.gene060373:CDS 45.0%
GATAGATTGGCGGAGACAAT+TGG - chr8.4:13024598-13024617 MS.gene060373:CDS 45.0%
GCAGAATTGTAAGCTCGAAC+AGG + chr8.4:13024199-13024218 None:intergenic 45.0%
GTTCCAGGAAACATCCCATT+TGG + chr8.4:13024556-13024575 None:intergenic 45.0%
TAACGACCCTGAATTGGTGA+AGG - chr8.4:13024171-13024190 MS.gene060373:intron 45.0%
TATACCTTTCTCACACTGCG+AGG - chr8.4:13023983-13024002 MS.gene060373:intron 45.0%
TCAACTGATCTTTGACTGGC+AGG + chr8.4:13026487-13026506 None:intergenic 45.0%
TCTCCGAAATGGTGTCTGAT+CGG + chr8.4:13024398-13024417 None:intergenic 45.0%
TGCTGTGTGAAATCTTCGGA+TGG - chr8.4:13023857-13023876 MS.gene060373:CDS 45.0%
TGTGATAGCTGTTAAGGGTG+GGG - chr8.4:13024345-13024364 MS.gene060373:intron 45.0%
TGTGTGAAATCTTCGGATGG+CGG - chr8.4:13023860-13023879 MS.gene060373:CDS 45.0%
TTCCCAAATGGGATGTTTCC+TGG - chr8.4:13024550-13024569 MS.gene060373:CDS 45.0%
! CTACAGTATTGCAACGGGTT+AGG + chr8.4:13025583-13025602 None:intergenic 45.0%
!! GGTGTTGAGTGTTGATCAAG+TGG - chr8.4:13024453-13024472 MS.gene060373:intron 45.0%
!!! TAATACATAATTTTTTTTAT+TGG + chr8.4:13026051-13026070 None:intergenic 5.0%
ACTGCTATGAGAACCAGGAC+AGG - chr8.4:13026387-13026406 MS.gene060373:CDS 50.0%
ACTGGGGTAACGAAGAGAGT+TGG - chr8.4:13024503-13024522 MS.gene060373:CDS 50.0%
AGATCCTCGTGATGCATGTG+CGG - chr8.4:13025725-13025744 MS.gene060373:CDS 50.0%
ATGGTGATCCTCCGAGATTG+TGG - chr8.4:13024527-13024546 MS.gene060373:CDS 50.0%
ATTGGCGGAGACAATTGGTG+TGG - chr8.4:13024603-13024622 MS.gene060373:CDS 50.0%
CATCTCAGAAGTTCCTGTCC+TGG + chr8.4:13026403-13026422 None:intergenic 50.0%
CCATGCTAACATGAGCCCTA+AGG + chr8.4:13026183-13026202 None:intergenic 50.0%
CCGAGATTGTGGTTCCCAAA+TGG - chr8.4:13024538-13024557 MS.gene060373:CDS 50.0%
CCTCCGATCAGACACCATTT+CGG - chr8.4:13024392-13024411 MS.gene060373:intron 50.0%
CCTTAGGGCTCATGTTAGCA+TGG - chr8.4:13026180-13026199 MS.gene060373:CDS 50.0%
CTGGGGTAACGAAGAGAGTT+GGG - chr8.4:13024504-13024523 MS.gene060373:CDS 50.0%
GCCAAATTATGGCTGTGGTG+TGG - chr8.4:13024853-13024872 MS.gene060373:intron 50.0%
GCTGTGATAGCTGTTAAGGG+TGG - chr8.4:13024343-13024362 MS.gene060373:intron 50.0%
GGTAACGAAGAGAGTTGGGA+TGG - chr8.4:13024508-13024527 MS.gene060373:CDS 50.0%
GTAACCTCGCAGTGTGAGAA+AGG + chr8.4:13023990-13024009 None:intergenic 50.0%
TAGCTGTTAAGGGTGGGGAT+CGG - chr8.4:13024350-13024369 MS.gene060373:intron 50.0%
TATCTCATCAAAGGGGGCCA+GGG - chr8.4:13025975-13025994 MS.gene060373:CDS 50.0%
TCGGTACTGCTATGAGAACC+AGG - chr8.4:13026382-13026401 MS.gene060373:CDS 50.0%
TCTCTTCGTTACCCCAGTGT+TGG + chr8.4:13024501-13024520 None:intergenic 50.0%
TTATCTCATCAAAGGGGGCC+AGG - chr8.4:13025974-13025993 MS.gene060373:CDS 50.0%
TTTGGGAACCACAATCTCGG+AGG + chr8.4:13024538-13024557 None:intergenic 50.0%
! AGGTTACTACCCTGATTCGC+TGG - chr8.4:13024003-13024022 MS.gene060373:intron 50.0%
!! GATGGCGGCTCTAGAAAACT+TGG - chr8.4:13023875-13023894 MS.gene060373:CDS 50.0%
ATAGCCGCACATGCATCACG+AGG + chr8.4:13025732-13025751 None:intergenic 55.0%
ATCTCATCAAAGGGGGCCAG+GGG - chr8.4:13025976-13025995 MS.gene060373:CDS 55.0%
CCGAAATGGTGTCTGATCGG+AGG + chr8.4:13024395-13024414 None:intergenic 55.0%
GGGTGGGGATCGGATTATTG+CGG - chr8.4:13024360-13024379 MS.gene060373:intron 55.0%
TGGGGATCGGATTATTGCGG+AGG - chr8.4:13024363-13024382 MS.gene060373:intron 55.0%
TGGTGTGGTTGCAACTCCAG+AGG - chr8.4:13024618-13024637 MS.gene060373:intron 55.0%
! AAACTTGCCCTGCTTGCTGC+TGG - chr8.4:13025552-13025571 MS.gene060373:intron 55.0%
AGGGATGACCAGCAGCAAGC+AGG + chr8.4:13025563-13025582 None:intergenic 60.0%
GGGATGACCAGCAGCAAGCA+GGG + chr8.4:13025562-13025581 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 13023833 13026506 13023833 ID=MS.gene060373
chr8.4 mRNA 13023833 13026506 13023833 ID=MS.gene060373.t1;Parent=MS.gene060373
chr8.4 exon 13025604 13026506 13025604 ID=MS.gene060373.t1.exon1;Parent=MS.gene060373.t1
chr8.4 CDS 13025604 13026506 13025604 ID=cds.MS.gene060373.t1;Parent=MS.gene060373.t1
chr8.4 exon 13024494 13024628 13024494 ID=MS.gene060373.t1.exon2;Parent=MS.gene060373.t1
chr8.4 CDS 13024494 13024628 13024494 ID=cds.MS.gene060373.t1;Parent=MS.gene060373.t1
chr8.4 exon 13023833 13023994 13023833 ID=MS.gene060373.t1.exon3;Parent=MS.gene060373.t1
chr8.4 CDS 13023833 13023994 13023833 ID=cds.MS.gene060373.t1;Parent=MS.gene060373.t1
Gene Sequence

>MS.gene060373

ATGGGTTGTGTTCATGGTAAATGTTGCTGTGTGAAATCTTCGGATGGCGGCTCTAGAAAACTTGGTTATCATCATAGCCATAGGAAGAACATACATGCTCAAAGAGTATTGAAAAATGTTTCTGTTCCTTCACACAATTTTGTTTTGGAGTATACCTTTCTCACACTGCGAGGTTACTACCCTGATTCGCTGGATAAGCAAAACCAAGATAGTTTTTGCATTAGGACGGAAATTCAAGGTAACCCGAATACCCATTTCTTTGGTGTTTTTGATGGGCATGGTCAATTTGGTAGTCAATGTTCAAACTTTGTTAGAGATAGGTTGGTAGAGAAGTTATCTAACGACCCTGAATTGGTGAAGGATCCTGTTCGAGCTTACAATTCTGCGTTCTCGGCAACAAATCACGAATTGCATACTAGTGACATTGATGATTCTATGAGTGGTACAACGGCTATTACAGTGCTTGTTGTTGGAGACACCCTTTATGTTGCTAATGTCGGTGATTCAAGAGCTGTGATAGCTGTTAAGGGTGGGGATCGGATTATTGCGGAGGACTTGTCCTCCGATCAGACACCATTTCGGAGAGATGAATACGAGAGAGTGAAACTTTGTGGAGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGATTAAGGATCCAAATATCCAACACTGGGGTAACGAAGAGAGTTGGGATGGTGATCCTCCGAGATTGTGGTTCCCAAATGGGATGTTTCCTGGAACTGCATTTACAAGGAGTTTAGGGGATAGATTGGCGGAGACAATTGGTGTGGTTGCAACTCCAGAGGTGTCAATAGTTCAGCTTACACCTAATCATCTCTTCTTTATTGTTGCTAGTGATGGCATATTTGAATTCTTGTCAAGCCAAACTGTTGTTGATATGGTATGATATGAAACCTCTCTTAGTTTTTTTTTTCTAGCTCTCAGTTTTAAATTGTGATTGCAGTCATAGACTCATAGTTGATATTGTGAATGACTGTGGACAAAGGTGTCTGATGCTGCCAAATTATGGCTGTGGTGTGGTTATGAAGAAAAATCTTTACATTTTGGCCACAATTATGGTTTTGGACTGCAATTATGCTGAGCATTTAGATAATATCATCTTAGGTTGAATTTTTTTTCTGTAATGTTTGCTAAACCTATTATCTACTTATTAGAAATCGTATCATCTATCAATGGTATGCAAGTTGCAATTGAAGACTTTGACTTGAAAATCAGGATAAAACTGATGTTTTCTGTGTGCAATTATGTTAATGGTTTATGGTTATTCGGTATTGCAAATAACTGTAAAGTCTTTTCTATAGAAGAGCTCTACACCAAGCTAAATACCATTCCAATTTTACTTTATAATTGATATATATATATATATATATATATATATATATATATATATATATATATCCCCATGGGGTAATATACAAACATAGGTTAGGTTCCTTGTTTAGCATAACTATGGTTCATTTACCAGGTAGTTGTGCAAATATATTTGAAATAAGAGAGCACAAGAAAAATTGTTTGTCACAATCATATGGGTGTGACGTAAGTTTATCCAAATTCCATCTGTTAATTAGGTCTATCCATTTATCATTTGTATTAACTTTTGGAATCATGTGAATCTTAATTCTAAATAGCATATGATAAAAAAATGCAATTGCCAATTCGTTTAATTGGAAGTTACTTGTTCAGTAGAGAAATGTAAAAACTTGCCCTGCTTGCTGCTGGTCATCCCTAACCCGTTGCAATACTGTAGACACTGATTTCGATGTTTACTTCCCTGCTGCATTACTGTGTAGAATTTTAACTCTGGCAGGATTCCCCTTCTTATCTTGATGAATATGTGTTTTATTTGATTCTGTAGGCAGCAAGATATACAGATCCTCGTGATGCATGTGCGGCTATTGCTGAAGAGTCATATAAACTGTGGTCGGAACTTGTGAATCGAACAGATGATATAACAATTATCATTGTCCAGATTAAAGGACTCTCTAATAATGTATGGATTATTGAATGCATTAACTCCTTCATTACCATTTTCCTTTTATGTGTAGTTTCTCCAAGCTTGTTTTAAAATTTTAGATTTGTATTATTAATGGATCTTCTTATCCCATGAAAAACAAGGTATTATCTCATCAAAGGGGGCCAGGGGAATAACTTTGATTAATTCACTCCATAGACTTTAGGAATTTTTTTTATTACCAATAAAAAAAATTATGTATTACCAAAAATAGAAATTATATATTGGAAATTGTGCAAATTATTTCTCAAAAAAATTGAAAATTATTTTTTCTCAATAAATACTTGCTATTTGGGGAATCCTTAACATGTGTCCTTAGGGCTCATGTTAGCATGGCCCAAAAAGAAAAACATGTAGAGCATCAATCTTCTCATCAATCTAGTATGCAAAATCAAAATCTTGCTACTGGTAGTTCAATAATTTGAATCAACTCATCATTGGTTGACTTGTTTGTCTAATATTTAGTTTGACATTGTAGTCAAGCACATCTGGAGTTCAATTAAGTGAGGTCAATGTCGGTACTGCTATGAGAACCAGGACAGGAACTTCTGAGATGTCTACTACCACTGAATTTGATGTTTATCATTCTGTGACGAACAGTTTCTCTGATTCACAATCCTGCCAGTCAAAGATCAGTTGA

Protein sequence

>MS.gene060373.t1

MGCVHGKCCCVKSSDGGSRKLGYHHSHRKNIHAQRVLKNVSVPSHNFVLEYTFLTLRGYYPDSLDKQNQDSFCIRTEIQGNPNTHFFGVFDGHGQFGSQCSNFVRDRLVEKLSNDPELVKDPVRAYNSAFSATNHELHTSDIDDSMSGTTAITVLVVGDTLYVANVGDSRAVIAVKGGDRIIAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGIKDPNIQHWGNEESWDGDPPRLWFPNGMFPGTAFTRSLGDRLAETIGVVATPEVSIVQLTPNHLFFIVASDGIFEFLSSQTVVDMAARYTDPRDACAAIAEESYKLWSELVNRTDDITIIIVQIKGLSNNSSTSGVQLSEVNVGTAMRTRTGTSEMSTTTEFDVYHSVTNSFSDSQSCQSKIS