Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79894.t1 | XP_003601683.1 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 7.90E-278 | 965.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79894.t1 | O23254 | 90.7 | 471 | 44 | 0 | 1 | 471 | 1 | 471 | 1.8e-259 | 896.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79894.t1 | G7JAR7 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 5.7e-278 | 965.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29165 | MS.gene79894 | PPI |
| MS.gene00638 | MS.gene79894 | PPI |
| MS.gene002066 | MS.gene79894 | PPI |
| MS.gene79894 | MS.gene027729 | PPI |
| MS.gene79894 | MS.gene072040 | PPI |
| MS.gene86222 | MS.gene79894 | PPI |
| MS.gene44289 | MS.gene79894 | PPI |
| MS.gene047182 | MS.gene79894 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79894.t1 | MTR_3g084310 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 974 |
| MS.gene79894.t1 | MTR_8g081510 | 94.268 | 471 | 27 | 0 | 1 | 471 | 1 | 471 | 0.0 | 935 |
| MS.gene79894.t1 | MTR_3g084310 | 97.802 | 364 | 8 | 0 | 1 | 364 | 1 | 364 | 0.0 | 748 |
| MS.gene79894.t1 | MTR_2g006570 | 64.440 | 464 | 160 | 1 | 4 | 462 | 128 | 591 | 0.0 | 645 |
| MS.gene79894.t1 | MTR_3g073470 | 64.425 | 461 | 156 | 2 | 7 | 462 | 118 | 575 | 0.0 | 638 |
| MS.gene79894.t1 | MTR_2g006570 | 64.762 | 420 | 143 | 1 | 48 | 462 | 1 | 420 | 0.0 | 585 |
| MS.gene79894.t1 | MTR_5g030950 | 58.369 | 466 | 187 | 4 | 9 | 469 | 53 | 516 | 0.0 | 555 |
| MS.gene79894.t1 | MTR_5g067060 | 57.602 | 467 | 189 | 5 | 9 | 469 | 42 | 505 | 0.0 | 551 |
| MS.gene79894.t1 | MTR_2g018290 | 59.607 | 458 | 165 | 6 | 12 | 461 | 87 | 532 | 0.0 | 544 |
| MS.gene79894.t1 | MTR_7g108420 | 48.519 | 439 | 183 | 9 | 37 | 462 | 1 | 409 | 1.86e-129 | 381 |
| MS.gene79894.t1 | MTR_1g073580 | 44.068 | 118 | 65 | 1 | 317 | 433 | 83 | 200 | 6.62e-24 | 100 |
| MS.gene79894.t1 | MTR_1g073580 | 30.942 | 223 | 133 | 6 | 157 | 363 | 1 | 218 | 6.01e-20 | 89.4 |
| MS.gene79894.t1 | MTR_3g062030 | 59.494 | 79 | 28 | 1 | 274 | 352 | 13 | 87 | 2.89e-21 | 92.8 |
| MS.gene79894.t1 | MTR_7g070020 | 53.659 | 82 | 28 | 2 | 336 | 410 | 1 | 79 | 6.77e-20 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79894.t1 | AT4G13930 | 90.658 | 471 | 44 | 0 | 1 | 471 | 1 | 471 | 0.0 | 902 |
| MS.gene79894.t1 | AT4G13890 | 78.541 | 466 | 100 | 0 | 1 | 466 | 1 | 466 | 0.0 | 794 |
| MS.gene79894.t1 | AT4G13890 | 79.540 | 391 | 80 | 0 | 1 | 391 | 1 | 391 | 0.0 | 672 |
| MS.gene79894.t1 | AT1G36370 | 63.305 | 466 | 166 | 1 | 4 | 464 | 130 | 595 | 0.0 | 635 |
| MS.gene79894.t1 | AT1G22020 | 62.284 | 464 | 170 | 1 | 4 | 462 | 134 | 597 | 0.0 | 624 |
| MS.gene79894.t1 | AT1G22020 | 62.284 | 464 | 170 | 1 | 4 | 462 | 134 | 597 | 0.0 | 624 |
| MS.gene79894.t1 | AT4G32520 | 59.785 | 465 | 168 | 6 | 3 | 461 | 77 | 528 | 0.0 | 572 |
| MS.gene79894.t1 | AT4G32520 | 59.785 | 465 | 168 | 6 | 3 | 461 | 77 | 528 | 0.0 | 572 |
| MS.gene79894.t1 | AT4G37930 | 57.479 | 468 | 192 | 4 | 9 | 471 | 52 | 517 | 0.0 | 561 |
| MS.gene79894.t1 | AT5G26780 | 56.410 | 468 | 197 | 4 | 9 | 471 | 52 | 517 | 0.0 | 545 |
| MS.gene79894.t1 | AT5G26780 | 56.410 | 468 | 197 | 4 | 9 | 471 | 52 | 517 | 0.0 | 545 |
| MS.gene79894.t1 | AT5G26780 | 54.545 | 484 | 197 | 5 | 9 | 471 | 52 | 533 | 0.0 | 535 |
| MS.gene79894.t1 | AT5G26780 | 54.545 | 484 | 197 | 5 | 9 | 471 | 52 | 533 | 0.0 | 535 |
Find 164 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATTAGGTCGTGGATTTC+TGG | 0.053246 | 3.1:-65415656 | None:intergenic |
| CAACAACCCATAAGAGTTTA+AGG | 0.154381 | 3.1:+65416413 | MS.gene79894:CDS |
| ACTTCTCGACATCAGCTTTA+AGG | 0.156137 | 3.1:-65417289 | None:intergenic |
| TGGGACCCCTTAAACTCTTA+TGG | 0.221123 | 3.1:-65416420 | None:intergenic |
| TATCCTAGAGATTGGGATTA+TGG | 0.237401 | 3.1:+65416181 | MS.gene79894:CDS |
| CTTTGAGAGTTTGCCGTATA+AGG | 0.255272 | 3.1:+65416066 | MS.gene79894:CDS |
| TCCATCTCGACGCCGCCACC+TGG | 0.291241 | 3.1:+65415876 | MS.gene79894:CDS |
| GTGCCCCAGCTATGACTTCC+AGG | 0.297783 | 3.1:+65417126 | MS.gene79894:CDS |
| AGCTATGACTTCCAGGGGTT+TGG | 0.298593 | 3.1:+65417133 | MS.gene79894:CDS |
| TTGGCATAGGCCTTGAACCC+TGG | 0.305858 | 3.1:-65416619 | None:intergenic |
| GTGTTTCCCCATTCACTAAC+TGG | 0.306705 | 3.1:-65415614 | None:intergenic |
| CTATTAGGTCGTGGATTTCT+GGG | 0.321184 | 3.1:-65415655 | None:intergenic |
| GGGACCCCTTAAACTCTTAT+GGG | 0.322732 | 3.1:-65416419 | None:intergenic |
| TGTTGGTGAGGGCGCTTCCT+AGG | 0.327933 | 3.1:-65415757 | None:intergenic |
| CTATACTCTTGCAGGCAATA+AGG | 0.347246 | 3.1:+65416847 | MS.gene79894:intron |
| CTAGAGATTCAAAAGGAATA+TGG | 0.351407 | 3.1:+65417212 | MS.gene79894:CDS |
| TCTTGCTGTTGCTTTGAAAC+AGG | 0.352836 | 3.1:+65416588 | MS.gene79894:CDS |
| GGCCTTGAACCCTGGGGTGG+TGG | 0.364540 | 3.1:-65416611 | None:intergenic |
| TTCTCAGGCTGACCCTTCTT+AGG | 0.365357 | 3.1:-65416481 | None:intergenic |
| ACTCATGGTTACTATACTTC+CGG | 0.367102 | 3.1:+65416013 | MS.gene79894:CDS |
| TGGCATAGGCCTTGAACCCT+GGG | 0.369136 | 3.1:-65416618 | None:intergenic |
| TTGAAACAGGCCACCACCCC+AGG | 0.371711 | 3.1:+65416601 | MS.gene79894:CDS |
| CCGGGTTTATTGATTATGAT+AGG | 0.371832 | 3.1:+65416101 | MS.gene79894:CDS |
| TAGTGGTCTTGTTGCTGCTC+AGG | 0.379467 | 3.1:+65416264 | MS.gene79894:CDS |
| TGACCCTTCTTAGGTGGCTT+AGG | 0.381473 | 3.1:-65416472 | None:intergenic |
| TGTGATATGGCTCATATTAG+TGG | 0.392899 | 3.1:+65416247 | MS.gene79894:CDS |
| TAGGTTGGAGGAGAAAGCTT+TGG | 0.396658 | 3.1:+65416120 | MS.gene79894:CDS |
| TCTGGGTCTACGGTTACTAA+TGG | 0.398028 | 3.1:-65415638 | None:intergenic |
| TTCCGGTGGGAAGAAGATTT+CGG | 0.399859 | 3.1:+65416030 | MS.gene79894:CDS |
| GATAGCAGTGCCTTGGCCCC+TGG | 0.411975 | 3.1:+65416926 | MS.gene79894:CDS |
| TCAGCCTCATTTGATATGCC+TGG | 0.414671 | 3.1:+65417314 | MS.gene79894:CDS |
| TTACCAATCCTTACTCCTCC+AGG | 0.418692 | 3.1:-65416944 | None:intergenic |
| CCATCTCGACGCCGCCACCT+GGG | 0.419420 | 3.1:+65415877 | MS.gene79894:CDS |
| GCCGCCGTAGTAACGGTTAC+CGG | 0.420593 | 3.1:-65415798 | None:intergenic |
| CATGCCTTCGGAATATTTGT+TGG | 0.421243 | 3.1:-65415774 | None:intergenic |
| CCGTTCTCAATCCTCATGAT+AGG | 0.427240 | 3.1:+65415954 | MS.gene79894:CDS |
| TAGGTGGCTTAGGTCCCTTC+CGG | 0.432847 | 3.1:-65416462 | None:intergenic |
| AGACCAAAGTTGATCATTTG+TGG | 0.433982 | 3.1:+65416148 | MS.gene79894:CDS |
| TGCATTGGCCTTAACTTGCT+TGG | 0.435848 | 3.1:-65416638 | None:intergenic |
| GGCCACCACCCCAGGGTTCA+AGG | 0.436064 | 3.1:+65416609 | MS.gene79894:CDS |
| TTGTGGGATCTCCGCCCTCT+TGG | 0.438255 | 3.1:+65416733 | MS.gene79894:CDS |
| TGAGCTGAAGTACAAGGATT+AGG | 0.440728 | 3.1:+65417349 | MS.gene79894:CDS |
| GGGACCTAAGCCACCTAAGA+AGG | 0.441492 | 3.1:+65416468 | MS.gene79894:CDS |
| TGAAAACCATCTTGTCTTGT+GGG | 0.442610 | 3.1:+65416717 | MS.gene79894:CDS |
| CTCCGCCCTCTTGGCTTGAC+CGG | 0.443426 | 3.1:+65416742 | MS.gene79894:CDS |
| GAAGTGCTTATCCTAGAGAT+TGG | 0.443642 | 3.1:+65416173 | MS.gene79894:CDS |
| TTCGGAATATTTGTTGGTGA+GGG | 0.446564 | 3.1:-65415768 | None:intergenic |
| AAATATTCCGAAGGCATGCC+CGG | 0.451502 | 3.1:+65415779 | MS.gene79894:CDS |
| GTTGTCGAATTCACCTTATA+CGG | 0.452900 | 3.1:-65416079 | None:intergenic |
| GTTCGATTCCGCGGCATTGA+CGG | 0.453190 | 3.1:-65415691 | None:intergenic |
| AACAACCCATAAGAGTTTAA+GGG | 0.454960 | 3.1:+65416414 | MS.gene79894:CDS |
| CAATCCTCATGATAGGATCA+TGG | 0.456642 | 3.1:+65415961 | MS.gene79894:CDS |
| CAATGGATCCAGTTAGTGAA+TGG | 0.456981 | 3.1:+65415606 | None:intergenic |
| GGCCTATGCCAAGCAAGTTA+AGG | 0.461054 | 3.1:+65416630 | MS.gene79894:CDS |
| GTTGGTGAGGGCGCTTCCTA+GGG | 0.465658 | 3.1:-65415756 | None:intergenic |
| GGCGAAATTCGCCGGTGAGC+CGG | 0.471948 | 3.1:-65415921 | None:intergenic |
| AAACCCCTGGAAGTCATAGC+TGG | 0.473638 | 3.1:-65417131 | None:intergenic |
| GTCGTGGATTTCTGGGTCTA+CGG | 0.480956 | 3.1:-65415648 | None:intergenic |
| ACGGTTACCGGGCATGCCTT+CGG | 0.482851 | 3.1:-65415786 | None:intergenic |
| CAACAGCAAGAGCACCAATC+TGG | 0.482879 | 3.1:-65416576 | None:intergenic |
| AATGGATCCAGTTAGTGAAT+GGG | 0.485642 | 3.1:+65415607 | None:intergenic |
| CCACCACAAATGATCAACTT+TGG | 0.485734 | 3.1:-65416151 | None:intergenic |
| CCTTGGCCCCTGGAGGAGTA+AGG | 0.485908 | 3.1:+65416936 | MS.gene79894:CDS |
| CCCAGGTGGCGGCGTCGAGA+TGG | 0.488002 | 3.1:-65415877 | None:intergenic |
| AAGTGCTTATCCTAGAGATT+GGG | 0.489191 | 3.1:+65416174 | MS.gene79894:CDS |
| TACCAATCCTTACTCCTCCA+GGG | 0.489382 | 3.1:-65416943 | None:intergenic |
| ACAATGTCACAGAACTCAAA+AGG | 0.494655 | 3.1:-65416385 | None:intergenic |
| AGTTTAAGGGGTCCCAGGGC+TGG | 0.495042 | 3.1:+65416427 | MS.gene79894:CDS |
| TTCCAGGGGTTTGGTTGAGA+AGG | 0.495865 | 3.1:+65417142 | MS.gene79894:CDS |
| AGCTCAGACACTAGGAATCC+AGG | 0.498066 | 3.1:-65417332 | None:intergenic |
| TTCGCCGGTGAGCCGGAGTA+AGG | 0.500155 | 3.1:-65415914 | None:intergenic |
| AACGTTGACACCCCAGGTGG+CGG | 0.500618 | 3.1:-65415888 | None:intergenic |
| TATAAGGTGAATTCGACAAC+CGG | 0.500999 | 3.1:+65416082 | MS.gene79894:CDS |
| AAATCATAAACAGCATTCTC+AGG | 0.503953 | 3.1:-65416496 | None:intergenic |
| ATAAGAGTTTAAGGGGTCCC+AGG | 0.506409 | 3.1:+65416422 | MS.gene79894:CDS |
| GTCCTTCTCAACCAAACCCC+TGG | 0.507871 | 3.1:-65417144 | None:intergenic |
| ATTTCCAAGTGCAACTGCAT+TGG | 0.507929 | 3.1:-65416653 | None:intergenic |
| GGCCTTAACTTGCTTGGCAT+AGG | 0.510929 | 3.1:-65416632 | None:intergenic |
| GTGTAAGCGGCGAAATTCGC+CGG | 0.514096 | 3.1:-65415929 | None:intergenic |
| AAGGCCAATGCAGTTGCACT+TGG | 0.514829 | 3.1:+65416649 | MS.gene79894:CDS |
| GTTTATTGATTATGATAGGT+TGG | 0.517688 | 3.1:+65416105 | MS.gene79894:CDS |
| ATGGGACTGGATCTACCTTC+TGG | 0.519276 | 3.1:+65415980 | MS.gene79894:CDS |
| CTTCGGAATATTTGTTGGTG+AGG | 0.520695 | 3.1:-65415769 | None:intergenic |
| CTTCCATAATCCCAATCTCT+AGG | 0.521993 | 3.1:-65416184 | None:intergenic |
| CTGAAAACCATCTTGTCTTG+TGG | 0.522347 | 3.1:+65416716 | MS.gene79894:CDS |
| CTAGAGATTGGGATTATGGA+AGG | 0.522411 | 3.1:+65416185 | MS.gene79894:CDS |
| ATAGGCCTTGAACCCTGGGG+TGG | 0.525456 | 3.1:-65416614 | None:intergenic |
| TGGAAATTACTTGATGAGCA+AGG | 0.526987 | 3.1:+65416669 | MS.gene79894:CDS |
| CCTTACTCCTCCAGGGGCCA+AGG | 0.527226 | 3.1:-65416936 | None:intergenic |
| TCTCACACTAGAGATTCAAA+AGG | 0.529312 | 3.1:+65417205 | MS.gene79894:CDS |
| AACCCCTGGAAGTCATAGCT+GGG | 0.531559 | 3.1:-65417130 | None:intergenic |
| TGCCCCAGCTATGACTTCCA+GGG | 0.531621 | 3.1:+65417127 | MS.gene79894:CDS |
| TCAGGCTGACCCTTCTTAGG+TGG | 0.531885 | 3.1:-65416478 | None:intergenic |
| TCTGGTGGACATTTGACTCA+TGG | 0.533259 | 3.1:+65415998 | MS.gene79894:CDS |
| TCATGATAGGATCATGGGAC+TGG | 0.541625 | 3.1:+65415967 | MS.gene79894:CDS |
| GCCCCTGGAGGAGTAAGGAT+TGG | 0.546720 | 3.1:+65416941 | MS.gene79894:CDS |
| GGAAATTACTTGATGAGCAA+GGG | 0.546759 | 3.1:+65416670 | MS.gene79894:CDS |
| GGTCCTCACAACCACCAGAT+TGG | 0.554648 | 3.1:+65416562 | MS.gene79894:CDS |
| ATTCGTTGCCGCCGTAGTAA+CGG | 0.556361 | 3.1:-65415805 | None:intergenic |
| GGTGGCGGCGTCGAGATGGA+AGG | 0.558501 | 3.1:-65415873 | None:intergenic |
| GTGAGGACCACCCTGAAGGG+AGG | 0.560471 | 3.1:-65416548 | None:intergenic |
| GTAGAAGATCATACCAGCCC+TGG | 0.560560 | 3.1:-65416440 | None:intergenic |
| AATCCTCATGATAGGATCAT+GGG | 0.561616 | 3.1:+65415962 | MS.gene79894:CDS |
| CCGCCGTAGTAACGGTTACC+GGG | 0.564640 | 3.1:-65415797 | None:intergenic |
| GCCCCAGCTATGACTTCCAG+GGG | 0.566659 | 3.1:+65417128 | MS.gene79894:CDS |
| TATTGATTATGATAGGTTGG+AGG | 0.566772 | 3.1:+65416108 | MS.gene79894:CDS |
| CATCTCGACGCCGCCACCTG+GGG | 0.569527 | 3.1:+65415878 | MS.gene79894:CDS |
| AGCCGAAATCTTCTTCCCAC+CGG | 0.572971 | 3.1:-65416032 | None:intergenic |
| AGCAGTGCCTTGGCCCCTGG+AGG | 0.580955 | 3.1:+65416929 | MS.gene79894:CDS |
| TGAGGACCACCCTGAAGGGA+GGG | 0.581330 | 3.1:-65416547 | None:intergenic |
| GGCTTCAATGACTGCGAAGG+AGG | 0.581885 | 3.1:-65415735 | None:intergenic |
| GGGCTGGTATGATCTTCTAC+CGG | 0.582673 | 3.1:+65416443 | MS.gene79894:CDS |
| TACTCTTGCAGGCAATAAGG+TGG | 0.583557 | 3.1:+65416850 | MS.gene79894:intron |
| TTCGCAGTCATTGAAGCCCT+AGG | 0.584856 | 3.1:+65415740 | MS.gene79894:CDS |
| AGTGTCTGAGCTGAAGTACA+AGG | 0.585877 | 3.1:+65417343 | MS.gene79894:CDS |
| AGGCGGTGAGAGCGCGTGAG+CGG | 0.589839 | 3.1:-65415853 | None:intergenic |
| TGTACTTCAGCTCAGACACT+AGG | 0.590369 | 3.1:-65417340 | None:intergenic |
| TGGTATGATCTTCTACCGGA+AGG | 0.596236 | 3.1:+65416447 | MS.gene79894:CDS |
| GAGGACCACCCTGAAGGGAG+GGG | 0.597307 | 3.1:-65416546 | None:intergenic |
| ATTGAGAACGGCAGTGTAAG+CGG | 0.599880 | 3.1:-65415942 | None:intergenic |
| TGAGAGTTACTGCACGGTGA+AGG | 0.602137 | 3.1:-65417187 | None:intergenic |
| GGACTGGATCTACCTTCTGG+TGG | 0.603220 | 3.1:+65415983 | MS.gene79894:CDS |
| TAAGAGTTTAAGGGGTCCCA+GGG | 0.604324 | 3.1:+65416423 | MS.gene79894:CDS |
| GGAGATCCCACAAGACAAGA+TGG | 0.605521 | 3.1:-65416723 | None:intergenic |
| TAGAAGATCATACCAGCCCT+GGG | 0.606806 | 3.1:-65416439 | None:intergenic |
| GAATCCAGGCATATCAAATG+AGG | 0.608458 | 3.1:-65417318 | None:intergenic |
| CCAAAGTTGATCATTTGTGG+TGG | 0.609653 | 3.1:+65416151 | MS.gene79894:CDS |
| GCACCAATCTGGTGGTTGTG+AGG | 0.609752 | 3.1:-65416565 | None:intergenic |
| GTTGTGAGGACCACCCTGAA+GGG | 0.610275 | 3.1:-65416551 | None:intergenic |
| GTCAACGTTCAACCTTACTC+CGG | 0.614352 | 3.1:+65415902 | MS.gene79894:CDS |
| TAGGGCTTCAATGACTGCGA+AGG | 0.618421 | 3.1:-65415738 | None:intergenic |
| AAGGGATACAGTCTTGTCAC+CGG | 0.618890 | 3.1:+65416688 | MS.gene79894:CDS |
| ACAACCCATAAGAGTTTAAG+GGG | 0.623565 | 3.1:+65416415 | MS.gene79894:CDS |
| ATGGATCCAGTTAGTGAATG+GGG | 0.624625 | 3.1:+65415608 | MS.gene79894:CDS |
| GTTTACCGGTCAAGCCAAGA+GGG | 0.625923 | 3.1:-65416747 | None:intergenic |
| GGACCTAAGCCACCTAAGAA+GGG | 0.629365 | 3.1:+65416469 | MS.gene79894:CDS |
| CATGGTTACTATACTTCCGG+TGG | 0.629951 | 3.1:+65416016 | MS.gene79894:CDS |
| GGTATGATCTTCTACCGGAA+GGG | 0.631495 | 3.1:+65416448 | MS.gene79894:CDS |
| CCTATCATAATCAATAAACC+CGG | 0.635056 | 3.1:-65416101 | None:intergenic |
| TGTTCACAGTAATGTTACAG+AGG | 0.637542 | 3.1:-65416886 | None:intergenic |
| TCAACCTTACTCCGGCTCAC+CGG | 0.640516 | 3.1:+65415910 | MS.gene79894:CDS |
| TGAGTCAAATGTCCACCAGA+AGG | 0.641882 | 3.1:-65415995 | None:intergenic |
| AGGTTGAACGTTGACACCCC+AGG | 0.642017 | 3.1:-65415894 | None:intergenic |
| ACCAATCCTTACTCCTCCAG+GGG | 0.642453 | 3.1:-65416942 | None:intergenic |
| GGTTGTGAGGACCACCCTGA+AGG | 0.642881 | 3.1:-65416552 | None:intergenic |
| ATGCCCGGTAACCGTTACTA+CGG | 0.643010 | 3.1:+65415794 | MS.gene79894:CDS |
| GGCGGCGTCGAGATGGAAGG+CGG | 0.644858 | 3.1:-65415870 | None:intergenic |
| GGCATAGGCCTTGAACCCTG+GGG | 0.646667 | 3.1:-65416617 | None:intergenic |
| CAGCAAGAGCACCAATCTGG+TGG | 0.647474 | 3.1:-65416573 | None:intergenic |
| CCCGGTAACCGTTACTACGG+CGG | 0.648521 | 3.1:+65415797 | MS.gene79894:CDS |
| ATAAGGTGAATTCGACAACC+GGG | 0.649213 | 3.1:+65416083 | MS.gene79894:CDS |
| CTCACCAACAAATATTCCGA+AGG | 0.651545 | 3.1:+65415770 | MS.gene79894:CDS |
| AGGCAATGAGTTCGATTCCG+CGG | 0.655674 | 3.1:-65415700 | None:intergenic |
| CCTATCATGAGGATTGAGAA+CGG | 0.656550 | 3.1:-65415954 | None:intergenic |
| TGAAACAGGCCACCACCCCA+GGG | 0.657309 | 3.1:+65416602 | MS.gene79894:CDS |
| TACCGGTCAAGCCAAGAGGG+CGG | 0.661729 | 3.1:-65416744 | None:intergenic |
| AGTTTACCGGTCAAGCCAAG+AGG | 0.668683 | 3.1:-65416748 | None:intergenic |
| CTAGTGTGAGAGTTACTGCA+CGG | 0.681721 | 3.1:-65417193 | None:intergenic |
| AGTCCCATGATCCTATCATG+AGG | 0.682957 | 3.1:-65415965 | None:intergenic |
| ACCCCTGGAAGTCATAGCTG+GGG | 0.683408 | 3.1:-65417129 | None:intergenic |
| ATGGTTACTATACTTCCGGT+GGG | 0.689475 | 3.1:+65416017 | MS.gene79894:CDS |
| AGACAAGTTGCTGATAAGTG+TGG | 0.694051 | 3.1:+65416211 | MS.gene79894:CDS |
| GGATACAGTCTTGTCACCGG+AGG | 0.711688 | 3.1:+65416691 | MS.gene79894:CDS |
| TTGAACGTTGACACCCCAGG+TGG | 0.772161 | 3.1:-65415891 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTACAAGTTTATTAGTTTAC+CGG | - | chr3.1:65416764-65416783 | None:intergenic | 20.0% |
| ! | ATAGAAAATGCATCAACAAT+TGG | - | chr3.1:65416831-65416850 | None:intergenic | 25.0% |
| !! | GTTTATTGATTATGATAGGT+TGG | + | chr3.1:65416105-65416124 | MS.gene79894:CDS | 25.0% |
| AAAAAATGTTGCAATGTCGT+TGG | + | chr3.1:65416782-65416801 | MS.gene79894:intron | 30.0% | |
| AAAAATGTTGCAATGTCGTT+GGG | + | chr3.1:65416783-65416802 | MS.gene79894:intron | 30.0% | |
| AAATCATAAACAGCATTCTC+AGG | - | chr3.1:65416499-65416518 | None:intergenic | 30.0% | |
| AACAACCCATAAGAGTTTAA+GGG | + | chr3.1:65416414-65416433 | MS.gene79894:CDS | 30.0% | |
| ATCAACACTTTGCATAAACA+AGG | - | chr3.1:65417054-65417073 | None:intergenic | 30.0% | |
| CCTATCATAATCAATAAACC+CGG | - | chr3.1:65416104-65416123 | None:intergenic | 30.0% | |
| CTAGAGATTCAAAAGGAATA+TGG | + | chr3.1:65417212-65417231 | MS.gene79894:CDS | 30.0% | |
| TAAACAAGGACTTCCAATAT+TGG | - | chr3.1:65417040-65417059 | None:intergenic | 30.0% | |
| TTGGGTTTGATTGTTAAAGT+TGG | + | chr3.1:65416801-65416820 | MS.gene79894:intron | 30.0% | |
| ! | GGCGTTTTTCTTTTTCTATT+AGG | - | chr3.1:65415673-65415692 | None:intergenic | 30.0% |
| ! | TATTGATTATGATAGGTTGG+AGG | + | chr3.1:65416108-65416127 | MS.gene79894:CDS | 30.0% |
| ! | TTTCTTTTTCTATTAGGTCG+TGG | - | chr3.1:65415667-65415686 | None:intergenic | 30.0% |
| !! | ACTTTTGAAGGATTTCAACA+AGG | + | chr3.1:65417238-65417257 | MS.gene79894:CDS | 30.0% |
| !! | CTTTTGAAGGATTTCAACAA+GGG | + | chr3.1:65417239-65417258 | MS.gene79894:CDS | 30.0% |
| !!! | AGTTACTTTTTTGTGGATAC+AGG | + | chr3.1:65416351-65416370 | MS.gene79894:intron | 30.0% |
| AAGTGCTTATCCTAGAGATT+GGG | + | chr3.1:65416174-65416193 | MS.gene79894:CDS | 35.0% | |
| AATCCTCATGATAGGATCAT+GGG | + | chr3.1:65415962-65415981 | MS.gene79894:CDS | 35.0% | |
| ACAACCCATAAGAGTTTAAG+GGG | + | chr3.1:65416415-65416434 | MS.gene79894:CDS | 35.0% | |
| ACAATGTCACAGAACTCAAA+AGG | - | chr3.1:65416388-65416407 | None:intergenic | 35.0% | |
| ACTCATGGTTACTATACTTC+CGG | + | chr3.1:65416013-65416032 | MS.gene79894:CDS | 35.0% | |
| CAACAACCCATAAGAGTTTA+AGG | + | chr3.1:65416413-65416432 | MS.gene79894:CDS | 35.0% | |
| GGAAATTACTTGATGAGCAA+GGG | + | chr3.1:65416670-65416689 | MS.gene79894:CDS | 35.0% | |
| GTTGTCGAATTCACCTTATA+CGG | - | chr3.1:65416082-65416101 | None:intergenic | 35.0% | |
| TATAAGGTGAATTCGACAAC+CGG | + | chr3.1:65416082-65416101 | MS.gene79894:CDS | 35.0% | |
| TATCCTAGAGATTGGGATTA+TGG | + | chr3.1:65416181-65416200 | MS.gene79894:CDS | 35.0% | |
| TCTCACACTAGAGATTCAAA+AGG | + | chr3.1:65417205-65417224 | MS.gene79894:CDS | 35.0% | |
| TGAAAACCATCTTGTCTTGT+GGG | + | chr3.1:65416717-65416736 | MS.gene79894:CDS | 35.0% | |
| TGGAAATTACTTGATGAGCA+AGG | + | chr3.1:65416669-65416688 | MS.gene79894:CDS | 35.0% | |
| TGTGATATGGCTCATATTAG+TGG | + | chr3.1:65416247-65416266 | MS.gene79894:CDS | 35.0% | |
| TGTTCACAGTAATGTTACAG+AGG | - | chr3.1:65416889-65416908 | None:intergenic | 35.0% | |
| ! | AGACCAAAGTTGATCATTTG+TGG | + | chr3.1:65416148-65416167 | MS.gene79894:CDS | 35.0% |
| ! | CCGGGTTTATTGATTATGAT+AGG | + | chr3.1:65416101-65416120 | MS.gene79894:CDS | 35.0% |
| ! | GGAATATGGCAAACTTTTGA+AGG | + | chr3.1:65417226-65417245 | MS.gene79894:CDS | 35.0% |
| ! | TGCATTTTCTATACTCTTGC+AGG | + | chr3.1:65416839-65416858 | MS.gene79894:intron | 35.0% |
| ! | TGCTCTTTTGCTTTGTGATA+TGG | + | chr3.1:65416234-65416253 | MS.gene79894:CDS | 35.0% |
| ! | TTCGGAATATTTGTTGGTGA+GGG | - | chr3.1:65415771-65415790 | None:intergenic | 35.0% |
| !!! | GAGCTTGAGTTACTTTTTTG+TGG | + | chr3.1:65416344-65416363 | MS.gene79894:intron | 35.0% |
| !!! | GTGAACAAGAATGCTGTTTT+TGG | + | chr3.1:65416902-65416921 | MS.gene79894:CDS | 35.0% |
| ACTTCTCGACATCAGCTTTA+AGG | - | chr3.1:65417292-65417311 | None:intergenic | 40.0% | |
| AGACAAGTTGCTGATAAGTG+TGG | + | chr3.1:65416211-65416230 | MS.gene79894:CDS | 40.0% | |
| ATAAGGTGAATTCGACAACC+GGG | + | chr3.1:65416083-65416102 | MS.gene79894:CDS | 40.0% | |
| ATGGATCCAGTTAGTGAATG+GGG | + | chr3.1:65415608-65415627 | MS.gene79894:CDS | 40.0% | |
| ATGGTTACTATACTTCCGGT+GGG | + | chr3.1:65416017-65416036 | MS.gene79894:CDS | 40.0% | |
| ATTTCCAAGTGCAACTGCAT+TGG | - | chr3.1:65416656-65416675 | None:intergenic | 40.0% | |
| CAATCCTCATGATAGGATCA+TGG | + | chr3.1:65415961-65415980 | MS.gene79894:CDS | 40.0% | |
| CATGCCTTCGGAATATTTGT+TGG | - | chr3.1:65415777-65415796 | None:intergenic | 40.0% | |
| CCACCACAAATGATCAACTT+TGG | - | chr3.1:65416154-65416173 | None:intergenic | 40.0% | |
| CCTATCATGAGGATTGAGAA+CGG | - | chr3.1:65415957-65415976 | None:intergenic | 40.0% | |
| CTAGAGATTGGGATTATGGA+AGG | + | chr3.1:65416185-65416204 | MS.gene79894:CDS | 40.0% | |
| CTATACTCTTGCAGGCAATA+AGG | + | chr3.1:65416847-65416866 | MS.gene79894:intron | 40.0% | |
| CTATTAGGTCGTGGATTTCT+GGG | - | chr3.1:65415658-65415677 | None:intergenic | 40.0% | |
| CTCACCAACAAATATTCCGA+AGG | + | chr3.1:65415770-65415789 | MS.gene79894:CDS | 40.0% | |
| CTGAAAACCATCTTGTCTTG+TGG | + | chr3.1:65416716-65416735 | MS.gene79894:CDS | 40.0% | |
| CTTCCATAATCCCAATCTCT+AGG | - | chr3.1:65416187-65416206 | None:intergenic | 40.0% | |
| GAATCCAGGCATATCAAATG+AGG | - | chr3.1:65417321-65417340 | None:intergenic | 40.0% | |
| TCTATTAGGTCGTGGATTTC+TGG | - | chr3.1:65415659-65415678 | None:intergenic | 40.0% | |
| TGACATGAGCTTCTGTTAAC+AGG | + | chr3.1:65417104-65417123 | MS.gene79894:intron | 40.0% | |
| TTGTTGCTGCTCAGGTATTA+TGG | + | chr3.1:65416272-65416291 | MS.gene79894:intron | 40.0% | |
| ! | AAGATGGTTTTCAGTTCCTC+CGG | - | chr3.1:65416710-65416729 | None:intergenic | 40.0% |
| ! | CCAAAGTTGATCATTTGTGG+TGG | + | chr3.1:65416151-65416170 | MS.gene79894:CDS | 40.0% |
| ! | CTTCGGAATATTTGTTGGTG+AGG | - | chr3.1:65415772-65415791 | None:intergenic | 40.0% |
| ! | CTTTGAGAGTTTGCCGTATA+AGG | + | chr3.1:65416066-65416085 | MS.gene79894:CDS | 40.0% |
| ! | GAAGGAGGTGAAATTTTCTG+AGG | - | chr3.1:65415723-65415742 | None:intergenic | 40.0% |
| ! | GAAGTGCTTATCCTAGAGAT+TGG | + | chr3.1:65416173-65416192 | MS.gene79894:CDS | 40.0% |
| !! | GACTTCCAATATTGGCTTTC+TGG | - | chr3.1:65417032-65417051 | None:intergenic | 40.0% |
| !! | TCTTGCTGTTGCTTTGAAAC+AGG | + | chr3.1:65416588-65416607 | MS.gene79894:CDS | 40.0% |
| AGTCCCATGATCCTATCATG+AGG | - | chr3.1:65415968-65415987 | None:intergenic | 45.0% | |
| AGTGTCTGAGCTGAAGTACA+AGG | + | chr3.1:65417343-65417362 | MS.gene79894:CDS | 45.0% | |
| ATAAGAGTTTAAGGGGTCCC+AGG | + | chr3.1:65416422-65416441 | MS.gene79894:CDS | 45.0% | |
| ATTGAGAACGGCAGTGTAAG+CGG | - | chr3.1:65415945-65415964 | None:intergenic | 45.0% | |
| CATGGTTACTATACTTCCGG+TGG | + | chr3.1:65416016-65416035 | MS.gene79894:CDS | 45.0% | |
| CCGTTCTCAATCCTCATGAT+AGG | + | chr3.1:65415954-65415973 | MS.gene79894:CDS | 45.0% | |
| CGTCACCAGAAAGCCAATAT+TGG | + | chr3.1:65417024-65417043 | MS.gene79894:intron | 45.0% | |
| CTAGTGTGAGAGTTACTGCA+CGG | - | chr3.1:65417196-65417215 | None:intergenic | 45.0% | |
| GGGACCCCTTAAACTCTTAT+GGG | - | chr3.1:65416422-65416441 | None:intergenic | 45.0% | |
| GGTATGATCTTCTACCGGAA+GGG | + | chr3.1:65416448-65416467 | MS.gene79894:CDS | 45.0% | |
| GTCAACGTTCAACCTTACTC+CGG | + | chr3.1:65415902-65415921 | MS.gene79894:CDS | 45.0% | |
| GTGTTTCCCCATTCACTAAC+TGG | - | chr3.1:65415617-65415636 | None:intergenic | 45.0% | |
| TAAGAGTTTAAGGGGTCCCA+GGG | + | chr3.1:65416423-65416442 | MS.gene79894:CDS | 45.0% | |
| TACCAATCCTTACTCCTCCA+GGG | - | chr3.1:65416946-65416965 | None:intergenic | 45.0% | |
| TACTCTTGCAGGCAATAAGG+TGG | + | chr3.1:65416850-65416869 | MS.gene79894:intron | 45.0% | |
| TAGAAGATCATACCAGCCCT+GGG | - | chr3.1:65416442-65416461 | None:intergenic | 45.0% | |
| TCAGCCTCATTTGATATGCC+TGG | + | chr3.1:65417314-65417333 | MS.gene79894:CDS | 45.0% | |
| TCATGATAGGATCATGGGAC+TGG | + | chr3.1:65415967-65415986 | MS.gene79894:CDS | 45.0% | |
| TCTGGGTCTACGGTTACTAA+TGG | - | chr3.1:65415641-65415660 | None:intergenic | 45.0% | |
| TGAGTCAAATGTCCACCAGA+AGG | - | chr3.1:65415998-65416017 | None:intergenic | 45.0% | |
| TGGGACCCCTTAAACTCTTA+TGG | - | chr3.1:65416423-65416442 | None:intergenic | 45.0% | |
| TGGTATGATCTTCTACCGGA+AGG | + | chr3.1:65416447-65416466 | MS.gene79894:CDS | 45.0% | |
| TGTACTTCAGCTCAGACACT+AGG | - | chr3.1:65417343-65417362 | None:intergenic | 45.0% | |
| TTACCAATCCTTACTCCTCC+AGG | - | chr3.1:65416947-65416966 | None:intergenic | 45.0% | |
| TTCCGGTGGGAAGAAGATTT+CGG | + | chr3.1:65416030-65416049 | MS.gene79894:CDS | 45.0% | |
| ! | AAATATTCCGAAGGCATGCC+CGG | + | chr3.1:65415779-65415798 | MS.gene79894:CDS | 45.0% |
| ! | AAGGGATACAGTCTTGTCAC+CGG | + | chr3.1:65416688-65416707 | MS.gene79894:CDS | 45.0% |
| ! | AGCGGCAAATGTTTTCGATC+TGG | - | chr3.1:65415838-65415857 | None:intergenic | 45.0% |
| ! | TAGGTTGGAGGAGAAAGCTT+TGG | + | chr3.1:65416120-65416139 | MS.gene79894:CDS | 45.0% |
| ! | TCTGGTGGACATTTGACTCA+TGG | + | chr3.1:65415998-65416017 | MS.gene79894:CDS | 45.0% |
| !! | TGCATTGGCCTTAACTTGCT+TGG | - | chr3.1:65416641-65416660 | None:intergenic | 45.0% |
| !! | TTTTGGTGATAGCAGTGCCT+TGG | + | chr3.1:65416919-65416938 | MS.gene79894:CDS | 45.0% |
| AAACCCCTGGAAGTCATAGC+TGG | - | chr3.1:65417134-65417153 | None:intergenic | 50.0% | |
| AACCCCTGGAAGTCATAGCT+GGG | - | chr3.1:65417133-65417152 | None:intergenic | 50.0% | |
| AAGGCCAATGCAGTTGCACT+TGG | + | chr3.1:65416649-65416668 | MS.gene79894:CDS | 50.0% | |
| ACCAATCCTTACTCCTCCAG+GGG | - | chr3.1:65416945-65416964 | None:intergenic | 50.0% | |
| AGCCGAAATCTTCTTCCCAC+CGG | - | chr3.1:65416035-65416054 | None:intergenic | 50.0% | |
| AGCTATGACTTCCAGGGGTT+TGG | + | chr3.1:65417133-65417152 | MS.gene79894:CDS | 50.0% | |
| AGCTCAGACACTAGGAATCC+AGG | - | chr3.1:65417335-65417354 | None:intergenic | 50.0% | |
| AGGCAATGAGTTCGATTCCG+CGG | - | chr3.1:65415703-65415722 | None:intergenic | 50.0% | |
| AGTTTACCGGTCAAGCCAAG+AGG | - | chr3.1:65416751-65416770 | None:intergenic | 50.0% | |
| ATGCCCGGTAACCGTTACTA+CGG | + | chr3.1:65415794-65415813 | MS.gene79894:CDS | 50.0% | |
| ATGGGACTGGATCTACCTTC+TGG | + | chr3.1:65415980-65415999 | MS.gene79894:CDS | 50.0% | |
| ATTCGTTGCCGCCGTAGTAA+CGG | - | chr3.1:65415808-65415827 | None:intergenic | 50.0% | |
| GGACCTAAGCCACCTAAGAA+GGG | + | chr3.1:65416469-65416488 | MS.gene79894:CDS | 50.0% | |
| GGAGATCCCACAAGACAAGA+TGG | - | chr3.1:65416726-65416745 | None:intergenic | 50.0% | |
| GGCCTATGCCAAGCAAGTTA+AGG | + | chr3.1:65416630-65416649 | MS.gene79894:CDS | 50.0% | |
| GTAGAAGATCATACCAGCCC+TGG | - | chr3.1:65416443-65416462 | None:intergenic | 50.0% | |
| GTTTACCGGTCAAGCCAAGA+GGG | - | chr3.1:65416750-65416769 | None:intergenic | 50.0% | |
| TAGGGCTTCAATGACTGCGA+AGG | - | chr3.1:65415741-65415760 | None:intergenic | 50.0% | |
| TGACCCTTCTTAGGTGGCTT+AGG | - | chr3.1:65416475-65416494 | None:intergenic | 50.0% | |
| TGAGAGTTACTGCACGGTGA+AGG | - | chr3.1:65417190-65417209 | None:intergenic | 50.0% | |
| TTCGCAGTCATTGAAGCCCT+AGG | + | chr3.1:65415740-65415759 | MS.gene79894:CDS | 50.0% | |
| TTCTCAGGCTGACCCTTCTT+AGG | - | chr3.1:65416484-65416503 | None:intergenic | 50.0% | |
| ! | GGGCTGGTATGATCTTCTAC+CGG | + | chr3.1:65416443-65416462 | MS.gene79894:CDS | 50.0% |
| ! | GTCGTGGATTTCTGGGTCTA+CGG | - | chr3.1:65415651-65415670 | None:intergenic | 50.0% |
| ! | TTCCAGGGGTTTGGTTGAGA+AGG | + | chr3.1:65417142-65417161 | MS.gene79894:CDS | 50.0% |
| !! | CAACAGCAAGAGCACCAATC+TGG | - | chr3.1:65416579-65416598 | None:intergenic | 50.0% |
| !! | GGCCTTAACTTGCTTGGCAT+AGG | - | chr3.1:65416635-65416654 | None:intergenic | 50.0% |
| !! | TAGTGGTCTTGTTGCTGCTC+AGG | + | chr3.1:65416264-65416283 | MS.gene79894:CDS | 50.0% |
| ACCCCTGGAAGTCATAGCTG+GGG | - | chr3.1:65417132-65417151 | None:intergenic | 55.0% | |
| AGGTTGAACGTTGACACCCC+AGG | - | chr3.1:65415897-65415916 | None:intergenic | 55.0% | |
| GAAAAACGCCGTCAATGCCG+CGG | + | chr3.1:65415683-65415702 | MS.gene79894:CDS | 55.0% | |
| GCACCAATCTGGTGGTTGTG+AGG | - | chr3.1:65416568-65416587 | None:intergenic | 55.0% | |
| GGACTGGATCTACCTTCTGG+TGG | + | chr3.1:65415983-65416002 | MS.gene79894:CDS | 55.0% | |
| GGCTTCAATGACTGCGAAGG+AGG | - | chr3.1:65415738-65415757 | None:intergenic | 55.0% | |
| GGGACCTAAGCCACCTAAGA+AGG | + | chr3.1:65416468-65416487 | MS.gene79894:CDS | 55.0% | |
| GGTCCTCACAACCACCAGAT+TGG | + | chr3.1:65416562-65416581 | MS.gene79894:CDS | 55.0% | |
| GTCCTTCTCAACCAAACCCC+TGG | - | chr3.1:65417147-65417166 | None:intergenic | 55.0% | |
| GTGTAAGCGGCGAAATTCGC+CGG | - | chr3.1:65415932-65415951 | None:intergenic | 55.0% | |
| GTTGTGAGGACCACCCTGAA+GGG | - | chr3.1:65416554-65416573 | None:intergenic | 55.0% | |
| TAGGTGGCTTAGGTCCCTTC+CGG | - | chr3.1:65416465-65416484 | None:intergenic | 55.0% | |
| TCAACCTTACTCCGGCTCAC+CGG | + | chr3.1:65415910-65415929 | MS.gene79894:CDS | 55.0% | |
| TCAGGCTGACCCTTCTTAGG+TGG | - | chr3.1:65416481-65416500 | None:intergenic | 55.0% | |
| TGCCCCAGCTATGACTTCCA+GGG | + | chr3.1:65417127-65417146 | MS.gene79894:CDS | 55.0% | |
| TGGCATAGGCCTTGAACCCT+GGG | - | chr3.1:65416621-65416640 | None:intergenic | 55.0% | |
| TTGAACGTTGACACCCCAGG+TGG | - | chr3.1:65415894-65415913 | None:intergenic | 55.0% | |
| TTGGCATAGGCCTTGAACCC+TGG | - | chr3.1:65416622-65416641 | None:intergenic | 55.0% | |
| ! | GGATACAGTCTTGTCACCGG+AGG | + | chr3.1:65416691-65416710 | MS.gene79894:CDS | 55.0% |
| ! | GTTCGATTCCGCGGCATTGA+CGG | - | chr3.1:65415694-65415713 | None:intergenic | 55.0% |
| !! | CAGCAAGAGCACCAATCTGG+TGG | - | chr3.1:65416576-65416595 | None:intergenic | 55.0% |
| !! | GCTGTTTTCCCCTCCCTTCA+GGG | + | chr3.1:65416538-65416557 | MS.gene79894:CDS | 55.0% |
| !!! | TGCTGTTTTCCCCTCCCTTC+AGG | + | chr3.1:65416537-65416556 | MS.gene79894:CDS | 55.0% |
| AACGTTGACACCCCAGGTGG+CGG | - | chr3.1:65415891-65415910 | None:intergenic | 60.0% | |
| ACGGTTACCGGGCATGCCTT+CGG | - | chr3.1:65415789-65415808 | None:intergenic | 60.0% | |
| AGTTTAAGGGGTCCCAGGGC+TGG | + | chr3.1:65416427-65416446 | MS.gene79894:CDS | 60.0% | |
| ATAGGCCTTGAACCCTGGGG+TGG | - | chr3.1:65416617-65416636 | None:intergenic | 60.0% | |
| CCCGGTAACCGTTACTACGG+CGG | + | chr3.1:65415797-65415816 | MS.gene79894:CDS | 60.0% | |
| CCGCCGTAGTAACGGTTACC+GGG | - | chr3.1:65415800-65415819 | None:intergenic | 60.0% | |
| GCCCCAGCTATGACTTCCAG+GGG | + | chr3.1:65417128-65417147 | MS.gene79894:CDS | 60.0% | |
| GCCCCTGGAGGAGTAAGGAT+TGG | + | chr3.1:65416941-65416960 | MS.gene79894:CDS | 60.0% | |
| GCCGCCGTAGTAACGGTTAC+CGG | - | chr3.1:65415801-65415820 | None:intergenic | 60.0% | |
| GGCATAGGCCTTGAACCCTG+GGG | - | chr3.1:65416620-65416639 | None:intergenic | 60.0% | |
| GGTTGTGAGGACCACCCTGA+AGG | - | chr3.1:65416555-65416574 | None:intergenic | 60.0% | |
| GTGCCCCAGCTATGACTTCC+AGG | + | chr3.1:65417126-65417145 | MS.gene79894:CDS | 60.0% | |
| TACCGGTCAAGCCAAGAGGG+CGG | - | chr3.1:65416747-65416766 | None:intergenic | 60.0% | |
| TGAAACAGGCCACCACCCCA+GGG | + | chr3.1:65416602-65416621 | MS.gene79894:CDS | 60.0% | |
| TGAGGACCACCCTGAAGGGA+GGG | - | chr3.1:65416550-65416569 | None:intergenic | 60.0% | |
| TTGAAACAGGCCACCACCCC+AGG | + | chr3.1:65416601-65416620 | MS.gene79894:CDS | 60.0% | |
| TTGTGGGATCTCCGCCCTCT+TGG | + | chr3.1:65416733-65416752 | MS.gene79894:CDS | 60.0% | |
| ! | GTTTTCCCCTCCCTTCAGGG+TGG | + | chr3.1:65416541-65416560 | MS.gene79894:CDS | 60.0% |
| !! | GTTGGTGAGGGCGCTTCCTA+GGG | - | chr3.1:65415759-65415778 | None:intergenic | 60.0% |
| !! | TGTTGGTGAGGGCGCTTCCT+AGG | - | chr3.1:65415760-65415779 | None:intergenic | 60.0% |
| CCTTACTCCTCCAGGGGCCA+AGG | - | chr3.1:65416939-65416958 | None:intergenic | 65.0% | |
| CCTTGGCCCCTGGAGGAGTA+AGG | + | chr3.1:65416936-65416955 | MS.gene79894:CDS | 65.0% | |
| GAGGACCACCCTGAAGGGAG+GGG | - | chr3.1:65416549-65416568 | None:intergenic | 65.0% | |
| GATAGCAGTGCCTTGGCCCC+TGG | + | chr3.1:65416926-65416945 | MS.gene79894:CDS | 65.0% | |
| GGCGAAATTCGCCGGTGAGC+CGG | - | chr3.1:65415924-65415943 | None:intergenic | 65.0% | |
| GTGAGGACCACCCTGAAGGG+AGG | - | chr3.1:65416551-65416570 | None:intergenic | 65.0% | |
| TTCGCCGGTGAGCCGGAGTA+AGG | - | chr3.1:65415917-65415936 | None:intergenic | 65.0% | |
| ! | CTCCGCCCTCTTGGCTTGAC+CGG | + | chr3.1:65416742-65416761 | MS.gene79894:CDS | 65.0% |
| AGCAGTGCCTTGGCCCCTGG+AGG | + | chr3.1:65416929-65416948 | MS.gene79894:CDS | 70.0% | |
| CATCTCGACGCCGCCACCTG+GGG | + | chr3.1:65415878-65415897 | MS.gene79894:CDS | 70.0% | |
| CCATCTCGACGCCGCCACCT+GGG | + | chr3.1:65415877-65415896 | MS.gene79894:CDS | 70.0% | |
| GGCCACCACCCCAGGGTTCA+AGG | + | chr3.1:65416609-65416628 | MS.gene79894:CDS | 70.0% | |
| GGCCTTGAACCCTGGGGTGG+TGG | - | chr3.1:65416614-65416633 | None:intergenic | 70.0% | |
| TCCATCTCGACGCCGCCACC+TGG | + | chr3.1:65415876-65415895 | MS.gene79894:CDS | 70.0% | |
| ! | AGGCGGTGAGAGCGCGTGAG+CGG | - | chr3.1:65415856-65415875 | None:intergenic | 70.0% |
| ! | GGCGGCGTCGAGATGGAAGG+CGG | - | chr3.1:65415873-65415892 | None:intergenic | 70.0% |
| ! | GGTGGCGGCGTCGAGATGGA+AGG | - | chr3.1:65415876-65415895 | None:intergenic | 70.0% |
| ! | CCCAGGTGGCGGCGTCGAGA+TGG | - | chr3.1:65415880-65415899 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 65415608 | 65417370 | 65415608 | ID=MS.gene79894 |
| chr3.1 | mRNA | 65415608 | 65417370 | 65415608 | ID=MS.gene79894.t1;Parent=MS.gene79894 |
| chr3.1 | exon | 65415608 | 65416285 | 65415608 | ID=MS.gene79894.t1.exon1;Parent=MS.gene79894.t1 |
| chr3.1 | CDS | 65415608 | 65416285 | 65415608 | ID=cds.MS.gene79894.t1;Parent=MS.gene79894.t1 |
| chr3.1 | exon | 65416373 | 65416763 | 65416373 | ID=MS.gene79894.t1.exon2;Parent=MS.gene79894.t1 |
| chr3.1 | CDS | 65416373 | 65416763 | 65416373 | ID=cds.MS.gene79894.t1;Parent=MS.gene79894.t1 |
| chr3.1 | exon | 65416861 | 65416962 | 65416861 | ID=MS.gene79894.t1.exon3;Parent=MS.gene79894.t1 |
| chr3.1 | CDS | 65416861 | 65416962 | 65416861 | ID=cds.MS.gene79894.t1;Parent=MS.gene79894.t1 |
| chr3.1 | exon | 65417126 | 65417370 | 65417126 | ID=MS.gene79894.t1.exon4;Parent=MS.gene79894.t1 |
| chr3.1 | CDS | 65417126 | 65417370 | 65417126 | ID=cds.MS.gene79894.t1;Parent=MS.gene79894.t1 |
| Gene Sequence |
| Protein sequence |
