Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79942.t1 | XP_013455379.1 | 85.1 | 618 | 88 | 2 | 1 | 614 | 1 | 618 | 7.90E-291 | 1010 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79942.t1 | A4FUF0 | 40.0 | 90 | 49 | 3 | 314 | 403 | 10 | 94 | 5.3e-09 | 65.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79942.t1 | A0A072UU80 | 85.1 | 618 | 88 | 2 | 1 | 614 | 1 | 618 | 5.7e-291 | 1010.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79942 | MS.gene067033 | PPI |
| MS.gene79942 | MS.gene007196 | PPI |
| MS.gene79942 | MS.gene75575 | PPI |
| MS.gene79942 | MS.gene24697 | PPI |
| MS.gene79942 | MS.gene045235 | PPI |
| MS.gene79942 | MS.gene045232 | PPI |
| MS.gene79942 | MS.gene55120 | PPI |
| MS.gene79942 | MS.gene46640 | PPI |
| MS.gene79942 | MS.gene050299 | PPI |
| MS.gene79942 | MS.gene045233 | PPI |
| MS.gene79942 | MS.gene95527 | PPI |
| MS.gene79942 | MS.gene037044 | PPI |
| MS.gene79130 | MS.gene79942 | PPI |
| MS.gene07741 | MS.gene79942 | PPI |
| MS.gene79942 | MS.gene77911 | PPI |
| MS.gene79942 | MS.gene92710 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79942.t1 | MTR_4g036445 | 88.673 | 618 | 66 | 2 | 1 | 614 | 1 | 618 | 0.0 | 1123 |
| MS.gene79942.t1 | MTR_1g049120 | 61.165 | 927 | 239 | 16 | 15 | 862 | 8 | 892 | 0.0 | 1021 |
| MS.gene79942.t1 | MTR_1g072780 | 49.315 | 657 | 273 | 18 | 248 | 862 | 310 | 948 | 2.49e-176 | 541 |
| MS.gene79942.t1 | MTR_2g047912 | 70.332 | 391 | 84 | 6 | 494 | 862 | 272 | 652 | 2.17e-175 | 528 |
| MS.gene79942.t1 | MTR_2g047912 | 47.607 | 397 | 144 | 12 | 23 | 365 | 9 | 395 | 1.02e-81 | 280 |
| MS.gene79942.t1 | MTR_1g066890 | 31.300 | 623 | 309 | 19 | 307 | 862 | 315 | 885 | 6.50e-70 | 252 |
| MS.gene79942.t1 | MTR_2g104120 | 30.148 | 607 | 315 | 14 | 310 | 862 | 258 | 809 | 1.60e-68 | 246 |
| MS.gene79942.t1 | MTR_2g104980 | 56.311 | 103 | 44 | 1 | 310 | 412 | 233 | 334 | 2.10e-34 | 138 |
| MS.gene79942.t1 | MTR_6g005840 | 35.484 | 186 | 116 | 4 | 309 | 493 | 271 | 453 | 5.88e-24 | 109 |
| MS.gene79942.t1 | MTR_6g005840 | 35.484 | 186 | 116 | 4 | 309 | 493 | 229 | 411 | 6.22e-24 | 109 |
| MS.gene79942.t1 | MTR_6g005960 | 35.484 | 186 | 116 | 4 | 309 | 493 | 211 | 393 | 3.61e-23 | 106 |
| MS.gene79942.t1 | MTR_7g113180 | 33.133 | 166 | 96 | 4 | 310 | 467 | 87 | 245 | 5.14e-21 | 100 |
| MS.gene79942.t1 | MTR_2g013200 | 54.808 | 104 | 19 | 5 | 61 | 163 | 69 | 145 | 6.42e-19 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79942.t1 | AT5G02950 | 32.028 | 562 | 319 | 15 | 313 | 862 | 98 | 608 | 2.35e-67 | 238 |
| MS.gene79942.t1 | AT5G02950 | 32.028 | 562 | 319 | 15 | 313 | 862 | 98 | 608 | 2.35e-67 | 238 |
| MS.gene79942.t1 | AT3G09670 | 35.519 | 366 | 195 | 10 | 309 | 665 | 196 | 529 | 4.66e-55 | 205 |
| MS.gene79942.t1 | AT3G09670 | 35.519 | 366 | 195 | 10 | 309 | 665 | 196 | 529 | 4.66e-55 | 205 |
| MS.gene79942.t1 | AT3G54760 | 37.226 | 274 | 124 | 6 | 609 | 860 | 471 | 718 | 1.51e-37 | 152 |
| MS.gene79942.t1 | AT3G54760 | 37.226 | 274 | 124 | 6 | 609 | 860 | 502 | 749 | 2.12e-37 | 152 |
| MS.gene79942.t1 | AT5G40340 | 41.011 | 178 | 99 | 6 | 310 | 485 | 125 | 298 | 1.99e-25 | 114 |
| MS.gene79942.t1 | AT5G40340 | 41.011 | 178 | 99 | 6 | 310 | 485 | 125 | 298 | 2.18e-25 | 114 |
| MS.gene79942.t1 | AT5G27650 | 33.690 | 187 | 114 | 6 | 310 | 489 | 171 | 354 | 6.28e-21 | 99.8 |
| MS.gene79942.t1 | AT3G05430 | 33.702 | 181 | 112 | 5 | 310 | 485 | 133 | 310 | 5.61e-20 | 96.7 |
| MS.gene79942.t1 | AT3G05430 | 33.702 | 181 | 112 | 5 | 310 | 485 | 133 | 310 | 5.66e-20 | 96.7 |
| MS.gene79942.t1 | AT3G27860 | 30.769 | 247 | 137 | 9 | 251 | 487 | 11 | 233 | 6.68e-15 | 79.7 |
| MS.gene79942.t1 | AT3G27860 | 30.769 | 247 | 137 | 9 | 251 | 487 | 11 | 233 | 6.68e-15 | 79.7 |
Find 236 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGAGGGAATGTCAAATTT+TGG | 0.168095 | 4.3:+63836746 | MS.gene79942:CDS |
| TTCTTTCTCTGATATGGTTT+GGG | 0.192247 | 4.3:+63837700 | MS.gene79942:CDS |
| TGCTATTTCGTTGCGTATTT+TGG | 0.192293 | 4.3:+63837812 | MS.gene79942:CDS |
| GGGTAGTTTCTTCATCTTCT+TGG | 0.215570 | 4.3:-63838947 | None:intergenic |
| TCAAATCCATCGTTTAAAAT+TGG | 0.222668 | 4.3:+63838634 | MS.gene79942:CDS |
| TTATTGTAACCGACCCTTTC+GGG | 0.236633 | 4.3:-63841139 | None:intergenic |
| ATTTGTGGAGATTCTGTTAA+AGG | 0.258827 | 4.3:+63836617 | MS.gene79942:CDS |
| AACCAAATGTTTAGGCGTTT+TGG | 0.264125 | 4.3:+63839313 | MS.gene79942:CDS |
| ATCTCAAGACGAGTCGAATA+TGG | 0.264577 | 4.3:+63837962 | MS.gene79942:CDS |
| TTTCTTTCTCTGATATGGTT+TGG | 0.268068 | 4.3:+63837699 | MS.gene79942:CDS |
| AACAACTTCATCAACAATAT+TGG | 0.288064 | 4.3:-63836870 | None:intergenic |
| TCTGTTTCAGATTCCTTTAG+TGG | 0.295593 | 4.3:-63839337 | None:intergenic |
| CTCAGCTGCTTGCATTTAAT+CGG | 0.313345 | 4.3:+63838203 | MS.gene79942:CDS |
| TGGTTTGTGGTTGCTCTTGC+CGG | 0.318469 | 4.3:+63840756 | MS.gene79942:CDS |
| TCGCTGTTTGTGTTGGTTCC+TGG | 0.319409 | 4.3:+63840897 | MS.gene79942:CDS |
| GAACAGACCGCAAAGGTTAA+AGG | 0.321406 | 4.3:+63837052 | MS.gene79942:CDS |
| CAATCACCGTCTCGAGAATC+TGG | 0.323985 | 4.3:-63838484 | None:intergenic |
| CTCCTCCTCTTGGAATGTTC+AGG | 0.329630 | 4.3:-63838532 | None:intergenic |
| GTGGTCTCGTAATGGTTGTT+TGG | 0.342056 | 4.3:+63840919 | MS.gene79942:CDS |
| TTTCTTGTACAGCAGAGGTT+GGG | 0.345467 | 4.3:+63841031 | MS.gene79942:intron |
| CTCGTAATGGTTGTTTGGGT+CGG | 0.352123 | 4.3:+63840924 | MS.gene79942:CDS |
| CAATTAACTTCGGCTGGCTT+TGG | 0.354897 | 4.3:-63839145 | None:intergenic |
| GTTATTGTAACCGACCCTTT+CGG | 0.354956 | 4.3:-63841140 | None:intergenic |
| AATCCTCCTTCGTGAGCTTC+CGG | 0.360341 | 4.3:+63840709 | MS.gene79942:CDS |
| GCAGGTTTGTCGGCAGCTAT+TGG | 0.362443 | 4.3:+63837353 | MS.gene79942:intron |
| GAAAGAATGTGTTTCGGAAC+AGG | 0.376759 | 4.3:+63837511 | MS.gene79942:CDS |
| GTCATCATCAAAGTGATCTA+TGG | 0.378320 | 4.3:-63838557 | None:intergenic |
| GGCTTTGGTGACTTAGCAGC+TGG | 0.383219 | 4.3:-63839130 | None:intergenic |
| GTCCAAAACGCCTAAACATT+TGG | 0.383688 | 4.3:-63839315 | None:intergenic |
| TTCACTATTTGCTGAAATGT+TGG | 0.384639 | 4.3:+63836667 | MS.gene79942:CDS |
| ATCCATGGCAGAAGCAGAAA+TGG | 0.385223 | 4.3:+63836484 | None:intergenic |
| AAGCACAATCTATAGCATTC+TGG | 0.385451 | 4.3:-63837931 | None:intergenic |
| CGAGGTCAATTCTGTTCCTT+CGG | 0.386330 | 4.3:+63839279 | MS.gene79942:CDS |
| GTGGCTGTTTATGCTTGGTT+TGG | 0.390939 | 4.3:+63840826 | MS.gene79942:CDS |
| CATATTCTATAAGTTTCATC+GGG | 0.394392 | 4.3:-63838117 | None:intergenic |
| TCGTCATACTCAACAGTTGT+AGG | 0.397359 | 4.3:-63838745 | None:intergenic |
| TTCTGTTGGTGCAGGTTTGT+CGG | 0.398560 | 4.3:+63837343 | MS.gene79942:intron |
| TATCTTACCTTTAACCTTTG+CGG | 0.399233 | 4.3:-63837059 | None:intergenic |
| CACATTCCACAGACCCATCT+AGG | 0.400964 | 4.3:-63836577 | None:intergenic |
| GATGACTTTGAAATGCAAAC+TGG | 0.405289 | 4.3:+63838574 | MS.gene79942:CDS |
| ATCGTGTCATAGATGTCTTT+AGG | 0.408022 | 4.3:-63838004 | None:intergenic |
| CTGTAATTGTGGCTGCTGAT+TGG | 0.409494 | 4.3:+63838893 | MS.gene79942:CDS |
| GAAGAAGAATTTGATGAAGC+TGG | 0.411787 | 4.3:+63837560 | MS.gene79942:CDS |
| AAGAGATGAGTGACTCGTAT+TGG | 0.413019 | 4.3:+63839004 | MS.gene79942:CDS |
| TAGATGGGTCTGTGGAATGT+GGG | 0.413456 | 4.3:+63836579 | MS.gene79942:CDS |
| TTAATTGTAGGCCCTATTCC+CGG | 0.414493 | 4.3:+63839161 | MS.gene79942:CDS |
| TCCCAGTGTTATCTACAGTA+TGG | 0.416357 | 4.3:-63838033 | None:intergenic |
| TTCTTGTACAGCAGAGGTTG+GGG | 0.418343 | 4.3:+63841032 | MS.gene79942:intron |
| TGTTTGGGTCGGGTCGAGGC+TGG | 0.419183 | 4.3:+63840935 | MS.gene79942:CDS |
| TACCGGTGGCTTTGACCGAT+TGG | 0.419297 | 4.3:+63838162 | MS.gene79942:CDS |
| CAACAACAAGTTTAATATCA+TGG | 0.419612 | 4.3:-63836547 | None:intergenic |
| ATCGTTCGTGTCGCAAGGAT+CGG | 0.421736 | 4.3:+63840732 | MS.gene79942:CDS |
| GGGAAGAGAAAACTAAGATA+TGG | 0.422328 | 4.3:+63837581 | MS.gene79942:CDS |
| CAAGACTTAACCAAATGTTT+AGG | 0.424996 | 4.3:+63839305 | MS.gene79942:CDS |
| TCAGGTGAAACCAGGTGATC+TGG | 0.428952 | 4.3:-63838514 | None:intergenic |
| GAATCTGGAGTCCCATTCAT+TGG | 0.430347 | 4.3:-63838469 | None:intergenic |
| CGGCTGTGGCTGTTTATGCT+TGG | 0.430390 | 4.3:+63840821 | MS.gene79942:CDS |
| CGCAAGGATCGGGTGGTTTG+TGG | 0.431505 | 4.3:+63840743 | MS.gene79942:CDS |
| TCGTAATGGTTGTTTGGGTC+GGG | 0.434796 | 4.3:+63840925 | MS.gene79942:CDS |
| GAAACATCCAATTCATTCTC+AGG | 0.437601 | 4.3:-63838721 | None:intergenic |
| GTGATGTTGTCCTTCAGATT+CGG | 0.444453 | 4.3:+63840801 | MS.gene79942:CDS |
| CCTCCACAACGTTGTATCTC+TGG | 0.447611 | 4.3:-63838247 | None:intergenic |
| GGCCTACAATTAACTTCGGC+TGG | 0.450591 | 4.3:-63839151 | None:intergenic |
| AAAGCGTAAATGTAATTTCA+AGG | 0.454246 | 4.3:+63838405 | MS.gene79942:CDS |
| ATCTATGGCACTCCTCCTCT+TGG | 0.456054 | 4.3:-63838542 | None:intergenic |
| TAGTTCAGAAATAGTTCATC+AGG | 0.456384 | 4.3:+63837637 | MS.gene79942:CDS |
| TGGTCTCGTAATGGTTGTTT+GGG | 0.457443 | 4.3:+63840920 | MS.gene79942:CDS |
| TGATGGGGCGTTAGCTCGTC+CGG | 0.458064 | 4.3:+63836640 | MS.gene79942:CDS |
| ATCAACGACACCATCTGTCT+TGG | 0.462935 | 4.3:-63838692 | None:intergenic |
| GCTTGCTTGTTGCGGTGGTT+TGG | 0.466728 | 4.3:+63841084 | MS.gene79942:CDS |
| GGTGACTTAGCAGCTGGCTC+TGG | 0.468065 | 4.3:-63839124 | None:intergenic |
| CATGATATTAAACTTGTTGT+TGG | 0.469282 | 4.3:+63836548 | MS.gene79942:CDS |
| AAGTCGACAGAGCAAGCAAA+CGG | 0.474065 | 4.3:+63839359 | MS.gene79942:CDS |
| TGGTTGTTTGGGTCGGGTCG+AGG | 0.474820 | 4.3:+63840931 | MS.gene79942:CDS |
| AGAAAAGTATATTCTCCAAA+GGG | 0.475610 | 4.3:-63838832 | None:intergenic |
| TCGTTCGTGTCGCAAGGATC+GGG | 0.476663 | 4.3:+63840733 | MS.gene79942:CDS |
| TCTCAAGACGAGTCGAATAT+GGG | 0.476985 | 4.3:+63837963 | MS.gene79942:CDS |
| GGTTCCTGGTGGTCTCGTAA+TGG | 0.477780 | 4.3:+63840911 | MS.gene79942:CDS |
| TCGGAACAGGTTGGTTCAGA+TGG | 0.478265 | 4.3:+63837524 | MS.gene79942:CDS |
| ACATATTCTATAAGTTTCAT+CGG | 0.479992 | 4.3:-63838118 | None:intergenic |
| ATGGGGAATGATAAAGTTGA+TGG | 0.482691 | 4.3:+63836842 | MS.gene79942:CDS |
| ATTCTCGAGACGGTGATTGT+TGG | 0.483757 | 4.3:+63838488 | MS.gene79942:CDS |
| ACCCATTTCTGCTTCTGCCA+TGG | 0.485695 | 4.3:-63836486 | None:intergenic |
| ATTGTTGATGAAGTTGTTTG+TGG | 0.487188 | 4.3:+63836875 | MS.gene79942:CDS |
| ATTCTTGAAATCAGAGAAGA+AGG | 0.488652 | 4.3:-63838869 | None:intergenic |
| GGTCATGGCTGCTTCGACGC+CGG | 0.490472 | 4.3:+63840650 | MS.gene79942:CDS |
| AAAACCTATCCATGGTGGCC+TGG | 0.490876 | 4.3:+63837731 | MS.gene79942:CDS |
| GGTTGGTTCAGATGGTGGTC+AGG | 0.496421 | 4.3:+63837532 | MS.gene79942:CDS |
| GCTTCGACGCCGGAGACTAT+AGG | 0.497561 | 4.3:+63840660 | MS.gene79942:CDS |
| TAATTGTAGGCCCTATTCCC+GGG | 0.498461 | 4.3:+63839162 | MS.gene79942:CDS |
| AGGATGTCAGACCCAATGAA+TGG | 0.498908 | 4.3:+63838457 | MS.gene79942:CDS |
| AGATGGGTCTGTGGAATGTG+GGG | 0.499368 | 4.3:+63836580 | MS.gene79942:CDS |
| AGCCAGCCGAAGTTAATTGT+AGG | 0.504606 | 4.3:+63839149 | MS.gene79942:CDS |
| GGGTCGAGGCTGGTGTTCGC+AGG | 0.505041 | 4.3:+63840945 | MS.gene79942:CDS |
| TTGTTGGACTCCAGATCACC+TGG | 0.505467 | 4.3:+63838504 | MS.gene79942:CDS |
| ATGTTATCATTCCGCCCAAT+CGG | 0.506004 | 4.3:-63836716 | None:intergenic |
| TTTCAAGGATACTATGCATC+CGG | 0.510265 | 4.3:+63838420 | MS.gene79942:CDS |
| TCAACGACACCATCTGTCTT+GGG | 0.510692 | 4.3:-63838691 | None:intergenic |
| GGAGATTCTGTTAAAGGTGA+TGG | 0.511319 | 4.3:+63836623 | MS.gene79942:CDS |
| TCAGCAAATAGTGAAGTAAC+CGG | 0.511382 | 4.3:-63836659 | None:intergenic |
| TGTAGAGAAAGAATGTGTTT+CGG | 0.512683 | 4.3:+63837505 | MS.gene79942:CDS |
| AGTCGACAGAGCAAGCAAAC+GGG | 0.514954 | 4.3:+63839360 | MS.gene79942:CDS |
| GTTGTTGGTGAAACCCTAGA+TGG | 0.516784 | 4.3:+63836563 | MS.gene79942:CDS |
| AAGAAGAATTTGATGAAGCT+GGG | 0.516856 | 4.3:+63837561 | MS.gene79942:CDS |
| AACAACAAGTTTAATATCAT+GGG | 0.518805 | 4.3:-63836546 | None:intergenic |
| TGGACAGATATTTGATCCCT+CGG | 0.519248 | 4.3:+63837751 | MS.gene79942:CDS |
| GAATGCTATAGATTGTGCTT+TGG | 0.520043 | 4.3:+63837934 | MS.gene79942:CDS |
| TCTTTCTCTGATATGGTTTG+GGG | 0.522638 | 4.3:+63837701 | MS.gene79942:CDS |
| TGATCCTCAGTATTGACTAC+AGG | 0.526122 | 4.3:-63838340 | None:intergenic |
| GGATGTCAGACCCAATGAAT+GGG | 0.526690 | 4.3:+63838458 | MS.gene79942:CDS |
| AAGTTCATAACAAGCTCAGC+AGG | 0.528013 | 4.3:-63839253 | None:intergenic |
| CAGAAAAGTATATTCTCCAA+AGG | 0.529508 | 4.3:-63838833 | None:intergenic |
| AATCTGGAGTCCCATTCATT+GGG | 0.529750 | 4.3:-63838468 | None:intergenic |
| CGGCGGTTGTTTCGCGTCGG+TGG | 0.532207 | 4.3:+63840776 | MS.gene79942:CDS |
| CTCCAATCGGTCAAAGCCAC+CGG | 0.532939 | 4.3:-63838164 | None:intergenic |
| AAAGATGCACTTATGAAGCC+TGG | 0.535913 | 4.3:+63837614 | MS.gene79942:CDS |
| CTAGATGGGTCTGTGGAATG+TGG | 0.536941 | 4.3:+63836578 | MS.gene79942:CDS |
| TCCGGATCGTTCGTGTCGCA+AGG | 0.537115 | 4.3:+63840727 | MS.gene79942:CDS |
| TTGTCCTTCAGATTCGGCTG+TGG | 0.537183 | 4.3:+63840807 | MS.gene79942:CDS |
| TTTCAAGAATTCTGTAATTG+TGG | 0.537467 | 4.3:+63838882 | MS.gene79942:CDS |
| TCCATGGCAGAAGCAGAAAT+GGG | 0.539688 | 4.3:+63836485 | None:intergenic |
| TTGATATTGAACATGCCGAT+GGG | 0.541321 | 4.3:+63836824 | MS.gene79942:CDS |
| AGCAAGCAAACGGGCAAGAG+TGG | 0.541526 | 4.3:+63839369 | MS.gene79942:CDS |
| GAGGGATCAAATATCTGTCC+AGG | 0.543133 | 4.3:-63837749 | None:intergenic |
| TTGCAGATCGCTGTTTGTGT+TGG | 0.543227 | 4.3:+63840890 | MS.gene79942:CDS |
| ATGAAGAAACTACCCATGGC+TGG | 0.548434 | 4.3:+63838955 | MS.gene79942:CDS |
| GTGACTCGTATTGGACTGAC+CGG | 0.548594 | 4.3:+63839013 | MS.gene79942:CDS |
| GAACAATCTGATGTACTTGA+GGG | 0.548918 | 4.3:+63836977 | MS.gene79942:CDS |
| GTGCAGCTTGCTTGTTGCGG+TGG | 0.550214 | 4.3:+63841079 | MS.gene79942:CDS |
| TGGTTAAGTCTTGTTTCCGA+AGG | 0.551741 | 4.3:-63839295 | None:intergenic |
| AATTGGTGACTGTATTCGTA+GGG | 0.552178 | 4.3:+63838651 | MS.gene79942:CDS |
| ATCAGATACAGTTCCAGCCA+TGG | 0.552361 | 4.3:-63838968 | None:intergenic |
| GAGATTCTGTTAAAGGTGAT+GGG | 0.553601 | 4.3:+63836624 | MS.gene79942:CDS |
| GTCTGATATTGTTGATATCG+TGG | 0.556725 | 4.3:+63836790 | MS.gene79942:CDS |
| AAATTGGTGACTGTATTCGT+AGG | 0.556924 | 4.3:+63838650 | MS.gene79942:CDS |
| TAGCAATCTCAAGCTCCAAT+CGG | 0.557430 | 4.3:-63838177 | None:intergenic |
| CTGTCCAGGCCACCATGGAT+AGG | 0.557596 | 4.3:-63837735 | None:intergenic |
| TGCCCGCTCAGATGCATCCG+AGG | 0.557951 | 4.3:-63837768 | None:intergenic |
| TGCCGGCGGTTGTTTCGCGT+CGG | 0.558696 | 4.3:+63840773 | MS.gene79942:CDS |
| GGAGTCAAATATGAGGCAAA+AGG | 0.560804 | 4.3:+63837481 | MS.gene79942:CDS |
| TTGGTGACAGATCATTTGCA+TGG | 0.561671 | 4.3:+63837831 | MS.gene79942:CDS |
| TTGTTGGTGAAACCCTAGAT+GGG | 0.562351 | 4.3:+63836564 | MS.gene79942:CDS |
| TGAACTATTTCTGAACTACC+AGG | 0.564289 | 4.3:-63837632 | None:intergenic |
| TGATAACATTGATGATGTTG+AGG | 0.565688 | 4.3:+63836730 | MS.gene79942:CDS |
| CACCGACGCGAAACAACCGC+CGG | 0.566863 | 4.3:-63840775 | None:intergenic |
| TTTGAAGGTGGTGACGGTCA+TGG | 0.567504 | 4.3:+63840635 | MS.gene79942:CDS |
| TGGAATGTTCAGGTGAAACC+AGG | 0.567728 | 4.3:-63838522 | None:intergenic |
| TAAGAAGTGTGTAGATGCAG+AGG | 0.570718 | 4.3:+63839396 | MS.gene79942:CDS |
| TTCCATCATGCAATGGCACA+TGG | 0.571641 | 4.3:-63837442 | None:intergenic |
| GATAACATTGATGATGTTGA+GGG | 0.572260 | 4.3:+63836731 | MS.gene79942:CDS |
| TTTAATATCATGGGCCACAA+TGG | 0.573129 | 4.3:-63836537 | None:intergenic |
| ACACTCAAATTACTGAGCAA+TGG | 0.575379 | 4.3:+63837417 | MS.gene79942:CDS |
| GATCCGGAAGCTCACGAAGG+AGG | 0.576435 | 4.3:-63840712 | None:intergenic |
| ACATTCCACAGACCCATCTA+GGG | 0.577354 | 4.3:-63836576 | None:intergenic |
| GATGGGTCTGTGGAATGTGG+GGG | 0.577375 | 4.3:+63836581 | MS.gene79942:CDS |
| GAACAGGTTGGTTCAGATGG+TGG | 0.577692 | 4.3:+63837527 | MS.gene79942:CDS |
| CAGAAATAGTTCATCAGGCA+CGG | 0.577908 | 4.3:+63837642 | MS.gene79942:CDS |
| GGTCATGATGAAGTCATTTG+TGG | 0.578468 | 4.3:+63836602 | MS.gene79942:CDS |
| ACAACCATTACGAGACCACC+AGG | 0.579517 | 4.3:-63840915 | None:intergenic |
| AATAAGCATCACACGTGGGG+TGG | 0.581145 | 4.3:+63838066 | MS.gene79942:CDS |
| TCCTTGCGACACGAACGATC+CGG | 0.583108 | 4.3:-63840728 | None:intergenic |
| ATTGGAGCTTGAGATTGCTA+AGG | 0.583274 | 4.3:+63838180 | MS.gene79942:CDS |
| TGAACAATCTGATGTACTTG+AGG | 0.586329 | 4.3:+63836976 | MS.gene79942:CDS |
| TCCCTCGGATGCATCTGAGC+GGG | 0.587317 | 4.3:+63837766 | MS.gene79942:CDS |
| ATGACTTTGAAATGCAAACT+GGG | 0.591679 | 4.3:+63838575 | MS.gene79942:CDS |
| TTGGAAAGAGATTTCATGCA+CGG | 0.592753 | 4.3:+63838912 | MS.gene79942:CDS |
| GAATGAAGCATCTCAGCTGA+AGG | 0.593084 | 4.3:+63837853 | MS.gene79942:CDS |
| CAAGCACACAGAGACCCCGA+AGG | 0.593350 | 4.3:-63840859 | None:intergenic |
| TTTGATATTGAACATGCCGA+TGG | 0.594443 | 4.3:+63836823 | MS.gene79942:CDS |
| CTGTTTGTGTTGGTTCCTGG+TGG | 0.595719 | 4.3:+63840900 | MS.gene79942:CDS |
| GAATGTGTTTCGGAACAGGT+TGG | 0.597469 | 4.3:+63837515 | MS.gene79942:CDS |
| CACCTGAACATTCCAAGAGG+AGG | 0.599443 | 4.3:+63838530 | MS.gene79942:CDS |
| TCGGCGAGGAGTCAAATATG+AGG | 0.599713 | 4.3:+63837474 | MS.gene79942:CDS |
| GTCGGCAGCTATTGGTAGTG+AGG | 0.600055 | 4.3:+63837361 | MS.gene79942:CDS |
| CAACTCATTCCCAAGACAGA+TGG | 0.601373 | 4.3:+63838682 | MS.gene79942:CDS |
| GCCATACTGTAGATAACACT+GGG | 0.603451 | 4.3:+63838032 | MS.gene79942:CDS |
| ACACTATCTAAGTTGCCTAC+CGG | 0.603998 | 4.3:+63838145 | MS.gene79942:CDS |
| TAGGGCACATTTCTCCACAA+TGG | 0.604810 | 4.3:+63837880 | MS.gene79942:CDS |
| TCAGATACAGTTCCAGCCAT+GGG | 0.605443 | 4.3:-63838967 | None:intergenic |
| GCAAAGTGAAAACCTATCCA+TGG | 0.606127 | 4.3:+63837723 | MS.gene79942:CDS |
| GTCAATACTGAGGATCAAGC+TGG | 0.611097 | 4.3:+63838346 | MS.gene79942:CDS |
| ATAGGGCCTACAATTAACTT+CGG | 0.611895 | 4.3:-63839155 | None:intergenic |
| CATCTGTCTTGGGAATGAGT+TGG | 0.612512 | 4.3:-63838681 | None:intergenic |
| TTCGTGTCGCAAGGATCGGG+TGG | 0.615243 | 4.3:+63840736 | MS.gene79942:CDS |
| TGTGCCATTGCATGATGGAA+AGG | 0.615296 | 4.3:+63837445 | MS.gene79942:CDS |
| AGCCATACTGTAGATAACAC+TGG | 0.620169 | 4.3:+63838031 | MS.gene79942:CDS |
| GCAGTGCAGCTTGCTTGTTG+CGG | 0.621037 | 4.3:+63841076 | MS.gene79942:CDS |
| AACAGAAAGAAGTAAAACAA+TGG | 0.622125 | 4.3:+63837030 | MS.gene79942:CDS |
| ATTTCATGCACGGATGAAGT+CGG | 0.625245 | 4.3:+63838922 | MS.gene79942:CDS |
| GACGCCGGAGACTATAGGTG+TGG | 0.625285 | 4.3:+63840665 | MS.gene79942:CDS |
| GCCCGCTCAGATGCATCCGA+GGG | 0.627415 | 4.3:-63837767 | None:intergenic |
| CTGCCCACACCTATAGTCTC+CGG | 0.628078 | 4.3:-63840669 | None:intergenic |
| AGCCATGTGCCATTGCATGA+TGG | 0.629049 | 4.3:+63837440 | MS.gene79942:CDS |
| GCATTCTCGTCTATATAACC+AGG | 0.629367 | 4.3:-63839229 | None:intergenic |
| ATCCCTCGGATGCATCTGAG+CGG | 0.632878 | 4.3:+63837765 | MS.gene79942:CDS |
| ATCAGAACACAATCATGCTG+AGG | 0.634853 | 4.3:+63839192 | MS.gene79942:CDS |
| ACGTTGTGGAGGCGTTGACA+AGG | 0.635296 | 4.3:+63838258 | MS.gene79942:CDS |
| ACAGCCACAGCCGAATCTGA+AGG | 0.636022 | 4.3:-63840811 | None:intergenic |
| GGGACTCCAGATTCTCGAGA+CGG | 0.640014 | 4.3:+63838478 | MS.gene79942:CDS |
| CATTCTGGAATGATTCTGAA+CGG | 0.640268 | 4.3:-63837916 | None:intergenic |
| AGTTGAAAAGTGCAATGCAA+AGG | 0.640652 | 4.3:+63836904 | MS.gene79942:CDS |
| AACAATGGAACAGACCGCAA+AGG | 0.641264 | 4.3:+63837045 | MS.gene79942:CDS |
| CGAAGGAACAGAATTGACCT+CGG | 0.643598 | 4.3:-63839278 | None:intergenic |
| CTATCTAAGTTGCCTACCGG+TGG | 0.644077 | 4.3:+63838148 | MS.gene79942:CDS |
| TCAACTTTATCATTCCCCAT+CGG | 0.645503 | 4.3:-63836839 | None:intergenic |
| AAGAAATAAGCATCACACGT+GGG | 0.646392 | 4.3:+63838062 | MS.gene79942:CDS |
| AGAAATAAGCATCACACGTG+GGG | 0.647299 | 4.3:+63838063 | MS.gene79942:CDS |
| ACGCCGGAGACTATAGGTGT+GGG | 0.650134 | 4.3:+63840666 | MS.gene79942:CDS |
| GAATCTGAAGGACAACATCA+CGG | 0.651282 | 4.3:-63840799 | None:intergenic |
| AATCGGTCAAAGCCACCGGT+AGG | 0.652954 | 4.3:-63838160 | None:intergenic |
| TCTTGTACAGCAGAGGTTGG+GGG | 0.655558 | 4.3:+63841033 | MS.gene79942:intron |
| TGATGAACAAAATTTGTGTG+AGG | 0.656644 | 4.3:+63838300 | MS.gene79942:CDS |
| TGATATTGAACATGCCGATG+GGG | 0.657087 | 4.3:+63836825 | MS.gene79942:CDS |
| TTTGTGGTTGCTCTTGCCGG+CGG | 0.658583 | 4.3:+63840759 | MS.gene79942:CDS |
| TGCAACTTCAGAAACCATTG+TGG | 0.658853 | 4.3:+63836523 | MS.gene79942:CDS |
| GGTGGATGAATCTCAAAATG+TGG | 0.659940 | 4.3:+63838084 | MS.gene79942:CDS |
| GCTTGTTATGAACTTTGCCG+AGG | 0.662578 | 4.3:+63839261 | MS.gene79942:CDS |
| AAGCACACAGAGACCCCGAA+GGG | 0.665319 | 4.3:-63840858 | None:intergenic |
| TCTCCACAATGGAAAAGCAG+AGG | 0.668805 | 4.3:+63837891 | MS.gene79942:CDS |
| AGATTCTGTTAAAGGTGATG+GGG | 0.670576 | 4.3:+63836625 | MS.gene79942:CDS |
| CCAGAGATACAACGTTGTGG+AGG | 0.670707 | 4.3:+63838247 | MS.gene79942:CDS |
| CAAGAAATAAGCATCACACG+TGG | 0.672704 | 4.3:+63838061 | MS.gene79942:CDS |
| AATATCTGTCCAGGCCACCA+TGG | 0.673733 | 4.3:-63837740 | None:intergenic |
| GAAGATGAAGAAACTACCCA+TGG | 0.677853 | 4.3:+63838951 | MS.gene79942:CDS |
| TTCTCGTCTATATAACCAGG+AGG | 0.679754 | 4.3:-63839226 | None:intergenic |
| TGAAACCCTAGATGGGTCTG+TGG | 0.694469 | 4.3:+63836571 | MS.gene79942:CDS |
| AACGATCCGGAAGCTCACGA+AGG | 0.705224 | 4.3:-63840715 | None:intergenic |
| TTGCCAGAGATACAACGTTG+TGG | 0.712309 | 4.3:+63838244 | MS.gene79942:CDS |
| TGACTCGTATTGGACTGACC+GGG | 0.716499 | 4.3:+63839014 | MS.gene79942:CDS |
| AAGTGAAAACCTATCCATGG+TGG | 0.718994 | 4.3:+63837726 | MS.gene79942:CDS |
| AACTCCTGTAGTCAATACTG+AGG | 0.723985 | 4.3:+63838336 | MS.gene79942:CDS |
| ATAGCTGACAACGATGTGAG+TGG | 0.732139 | 4.3:+63836935 | MS.gene79942:CDS |
| TTTCACCTGAACATTCCAAG+AGG | 0.733912 | 4.3:+63838527 | MS.gene79942:CDS |
| AACAATCTGATGTACTTGAG+GGG | 0.737887 | 4.3:+63836978 | MS.gene79942:CDS |
| ATATTCTATAAGTTTCATCG+GGG | 0.738354 | 4.3:-63838116 | None:intergenic |
| ATAAATGTTGAAGATCAACA+AGG | 0.751136 | 4.3:+63837007 | MS.gene79942:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTAAAAAAAAAAAAAA+AGG | - | chr4.3:63839773-63839792 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTTTTTAATAA+AGG | + | chr4.3:63839772-63839791 | MS.gene79942:intron | 0.0% |
| !!! | TTATAATATTTTCATTTACA+TGG | - | chr4.3:63840322-63840341 | None:intergenic | 10.0% |
| !! | GTTAAAAAAAAAAAAAGATG+CGG | + | chr4.3:63840395-63840414 | MS.gene79942:intron | 15.0% |
| !! | TAAAAGTAATAGATAATAAC+TGG | - | chr4.3:63839708-63839727 | None:intergenic | 15.0% |
| !! | TAAAGGAATATTCTAATAAA+CGG | + | chr4.3:63839789-63839808 | MS.gene79942:intron | 15.0% |
| !! | TTAAAAAAAAAAAAAGATGC+GGG | + | chr4.3:63840396-63840415 | MS.gene79942:intron | 15.0% |
| !!! | AGTGTTAATATAATTCATTT+TGG | + | chr4.3:63840369-63840388 | MS.gene79942:intron | 15.0% |
| !!! | TCATTTTCTCAAAATTTTAT+AGG | + | chr4.3:63837242-63837261 | MS.gene79942:intron | 15.0% |
| !! | AAAAGGATATGAATATTTCA+TGG | - | chr4.3:63839756-63839775 | None:intergenic | 20.0% |
| !! | AAATGAGTATTTAGGAAAAT+TGG | + | chr4.3:63839649-63839668 | MS.gene79942:intron | 20.0% |
| !! | AACAACAAGTTTAATATCAT+GGG | - | chr4.3:63836549-63836568 | None:intergenic | 20.0% |
| !! | AATTATCTGTTACATGAAAT+TGG | + | chr4.3:63839836-63839855 | MS.gene79942:intron | 20.0% |
| !! | ACATATTCTATAAGTTTCAT+CGG | - | chr4.3:63838121-63838140 | None:intergenic | 20.0% |
| !! | ACTTGATTAAATGAGAAATT+TGG | + | chr4.3:63839611-63839630 | MS.gene79942:intron | 20.0% |
| !! | ATTAAAGATCCAATTATCAT+GGG | + | chr4.3:63839512-63839531 | MS.gene79942:intron | 20.0% |
| !! | GTTAAAAAGTTCAACATATT+TGG | + | chr4.3:63839433-63839452 | MS.gene79942:intron | 20.0% |
| !! | TAAAAAAAAAAAAAGATGCG+GGG | + | chr4.3:63840397-63840416 | MS.gene79942:intron | 20.0% |
| !! | TATACTAATCTTATACATGA+CGG | + | chr4.3:63839729-63839748 | MS.gene79942:intron | 20.0% |
| !!! | ATCACTATAATACTTTGTTT+TGG | - | chr4.3:63840446-63840465 | None:intergenic | 20.0% |
| ! | AAAGCGTAAATGTAATTTCA+AGG | + | chr4.3:63838405-63838424 | MS.gene79942:CDS | 25.0% |
| ! | AACAACTTCATCAACAATAT+TGG | - | chr4.3:63836873-63836892 | None:intergenic | 25.0% |
| ! | AACAGAAAGAAGTAAAACAA+TGG | + | chr4.3:63837030-63837049 | MS.gene79942:CDS | 25.0% |
| ! | ATAAATGTTGAAGATCAACA+AGG | + | chr4.3:63837007-63837026 | MS.gene79942:CDS | 25.0% |
| ! | ATATTCTATAAGTTTCATCG+GGG | - | chr4.3:63838119-63838138 | None:intergenic | 25.0% |
| ! | ATCACAAACTTGTCTTAAAT+CGG | - | chr4.3:63840096-63840115 | None:intergenic | 25.0% |
| ! | CAACAACAAGTTTAATATCA+TGG | - | chr4.3:63836550-63836569 | None:intergenic | 25.0% |
| ! | CAGAATATGAAACATTAAGT+TGG | - | chr4.3:63839585-63839604 | None:intergenic | 25.0% |
| ! | CATATTCTATAAGTTTCATC+GGG | - | chr4.3:63838120-63838139 | None:intergenic | 25.0% |
| ! | GACAAAATTCAATGTAATCT+CGG | - | chr4.3:63837224-63837243 | None:intergenic | 25.0% |
| ! | GATTAAAGATCCAATTATCA+TGG | + | chr4.3:63839511-63839530 | MS.gene79942:intron | 25.0% |
| ! | TCTCAACAAAATGAGTATTT+AGG | + | chr4.3:63839641-63839660 | MS.gene79942:intron | 25.0% |
| ! | TTTCAAGAATTCTGTAATTG+TGG | + | chr4.3:63838882-63838901 | MS.gene79942:CDS | 25.0% |
| !! | AATTACATTTACGCTTTTGA+CGG | - | chr4.3:63838402-63838421 | None:intergenic | 25.0% |
| !! | AGAAAAGTATATTCTCCAAA+GGG | - | chr4.3:63838835-63838854 | None:intergenic | 25.0% |
| !! | TCAAATCCATCGTTTAAAAT+TGG | + | chr4.3:63838634-63838653 | MS.gene79942:CDS | 25.0% |
| !!! | AAGATATCTGCTGATTTTAT+TGG | + | chr4.3:63837076-63837095 | MS.gene79942:intron | 25.0% |
| !!! | AATTTTAAACGATGGATTTG+AGG | - | chr4.3:63838635-63838654 | None:intergenic | 25.0% |
| !!! | CATGATATTAAACTTGTTGT+TGG | + | chr4.3:63836548-63836567 | MS.gene79942:CDS | 25.0% |
| !!! | TTACTGTGTTATTTTGTTTC+TGG | - | chr4.3:63839933-63839952 | None:intergenic | 25.0% |
| AAGAAGAATTTGATGAAGCT+GGG | + | chr4.3:63837561-63837580 | MS.gene79942:CDS | 30.0% | |
| ATAGCATCAAACAATCTTCA+AGG | + | chr4.3:63840048-63840067 | MS.gene79942:intron | 30.0% | |
| ATTCTTGAAATCAGAGAAGA+AGG | - | chr4.3:63838872-63838891 | None:intergenic | 30.0% | |
| ATTTGTGGAGATTCTGTTAA+AGG | + | chr4.3:63836617-63836636 | MS.gene79942:CDS | 30.0% | |
| CAAGACTTAACCAAATGTTT+AGG | + | chr4.3:63839305-63839324 | MS.gene79942:CDS | 30.0% | |
| CATTACTTACTCTACAAACA+AGG | - | chr4.3:63839556-63839575 | None:intergenic | 30.0% | |
| CTTGTTTGTAGAGTAAGTAA+TGG | + | chr4.3:63839554-63839573 | MS.gene79942:intron | 30.0% | |
| TAGTTCAGAAATAGTTCATC+AGG | + | chr4.3:63837637-63837656 | MS.gene79942:CDS | 30.0% | |
| TATCTTACCTTTAACCTTTG+CGG | - | chr4.3:63837062-63837081 | None:intergenic | 30.0% | |
| TCAAAATAGTGTAGTGTCAT+TGG | - | chr4.3:63840285-63840304 | None:intergenic | 30.0% | |
| TCACAAACTTGTCTTAAATC+GGG | - | chr4.3:63840095-63840114 | None:intergenic | 30.0% | |
| TGATGAACAAAATTTGTGTG+AGG | + | chr4.3:63838300-63838319 | MS.gene79942:CDS | 30.0% | |
| TGTAGAGAAAGAATGTGTTT+CGG | + | chr4.3:63837505-63837524 | MS.gene79942:CDS | 30.0% | |
| TTCTTTCTCTGATATGGTTT+GGG | + | chr4.3:63837700-63837719 | MS.gene79942:CDS | 30.0% | |
| TTTCTTTCTCTGATATGGTT+TGG | + | chr4.3:63837699-63837718 | MS.gene79942:CDS | 30.0% | |
| ! | ATTACATTTACGCTTTTGAC+GGG | - | chr4.3:63838401-63838420 | None:intergenic | 30.0% |
| ! | ATTGTTGATGAAGTTGTTTG+TGG | + | chr4.3:63836875-63836894 | MS.gene79942:CDS | 30.0% |
| ! | CAGAAAAGTATATTCTCCAA+AGG | - | chr4.3:63838836-63838855 | None:intergenic | 30.0% |
| ! | GAAAAGAAGCAACATTTTAG+AGG | + | chr4.3:63839982-63840001 | MS.gene79942:intron | 30.0% |
| ! | GGAGAATATACTTTTCTGAA+TGG | + | chr4.3:63838838-63838857 | MS.gene79942:CDS | 30.0% |
| ! | TGTTTTTCCTGAGAATGAAT+TGG | + | chr4.3:63838714-63838733 | MS.gene79942:CDS | 30.0% |
| ! | TTCACTATTTGCTGAAATGT+TGG | + | chr4.3:63836667-63836686 | MS.gene79942:CDS | 30.0% |
| ! | TTGAGGGAATGTCAAATTTT+GGG | + | chr4.3:63836747-63836766 | MS.gene79942:CDS | 30.0% |
| !! | AAATGTTGCTTCTTTTCACT+TGG | - | chr4.3:63839979-63839998 | None:intergenic | 30.0% |
| !! | ATGACTTTGAAATGCAAACT+GGG | + | chr4.3:63838575-63838594 | MS.gene79942:CDS | 30.0% |
| !! | GATAACATTGATGATGTTGA+GGG | + | chr4.3:63836731-63836750 | MS.gene79942:CDS | 30.0% |
| !! | TGATAACATTGATGATGTTG+AGG | + | chr4.3:63836730-63836749 | MS.gene79942:CDS | 30.0% |
| !!! | ATCCTTTTTTCTTTCTTTGC+CGG | - | chr4.3:63838442-63838461 | None:intergenic | 30.0% |
| !!! | GACAAGTAGTTCTTTTTTTC+TGG | - | chr4.3:63839092-63839111 | None:intergenic | 30.0% |
| !!! | TCATGTTTTTTGCTAAACAC+TGG | - | chr4.3:63839493-63839512 | None:intergenic | 30.0% |
| !!! | TGTGTTCTGATTTTTTTTCC+CGG | - | chr4.3:63839183-63839202 | None:intergenic | 30.0% |
| !!! | TTTTTCTGGTTTTTCTGCAA+TGG | - | chr4.3:63839078-63839097 | None:intergenic | 30.0% |
| AAAGGAACAAGACACAAAAC+AGG | - | chr4.3:63840567-63840586 | None:intergenic | 35.0% | |
| AACAATCTGATGTACTTGAG+GGG | + | chr4.3:63836978-63836997 | MS.gene79942:CDS | 35.0% | |
| AAGAAATAAGCATCACACGT+GGG | + | chr4.3:63838062-63838081 | MS.gene79942:CDS | 35.0% | |
| AAGATCCAATTATCATGGGA+AGG | + | chr4.3:63839516-63839535 | MS.gene79942:intron | 35.0% | |
| AAGCACAATCTATAGCATTC+TGG | - | chr4.3:63837934-63837953 | None:intergenic | 35.0% | |
| ACACTCAAATTACTGAGCAA+TGG | + | chr4.3:63837417-63837436 | MS.gene79942:CDS | 35.0% | |
| AGATTCTGTTAAAGGTGATG+GGG | + | chr4.3:63836625-63836644 | MS.gene79942:CDS | 35.0% | |
| ATAGGGCCTACAATTAACTT+CGG | - | chr4.3:63839158-63839177 | None:intergenic | 35.0% | |
| ATCATCACACAAAACAGTCA+TGG | - | chr4.3:63840517-63840536 | None:intergenic | 35.0% | |
| ATCCGGCAAAGAAAGAAAAA+AGG | + | chr4.3:63838437-63838456 | MS.gene79942:CDS | 35.0% | |
| ATCGTGTCATAGATGTCTTT+AGG | - | chr4.3:63838007-63838026 | None:intergenic | 35.0% | |
| ATGGGGAATGATAAAGTTGA+TGG | + | chr4.3:63836842-63836861 | MS.gene79942:CDS | 35.0% | |
| CGAATTTCTACGAACATAGT+TGG | + | chr4.3:63839677-63839696 | MS.gene79942:intron | 35.0% | |
| GAAACATCCAATTCATTCTC+AGG | - | chr4.3:63838724-63838743 | None:intergenic | 35.0% | |
| GAACAATCTGATGTACTTGA+GGG | + | chr4.3:63836977-63836996 | MS.gene79942:CDS | 35.0% | |
| GAAGAAGAATTTGATGAAGC+TGG | + | chr4.3:63837560-63837579 | MS.gene79942:CDS | 35.0% | |
| GAATGCTATAGATTGTGCTT+TGG | + | chr4.3:63837934-63837953 | MS.gene79942:CDS | 35.0% | |
| GAGATTCTGTTAAAGGTGAT+GGG | + | chr4.3:63836624-63836643 | MS.gene79942:CDS | 35.0% | |
| GGGAAGAGAAAACTAAGATA+TGG | + | chr4.3:63837581-63837600 | MS.gene79942:CDS | 35.0% | |
| GGTCTTACATCAAACTATCT+AGG | + | chr4.3:63840069-63840088 | MS.gene79942:intron | 35.0% | |
| GTCATCATCAAAGTGATCTA+TGG | - | chr4.3:63838560-63838579 | None:intergenic | 35.0% | |
| GTCTGATATTGTTGATATCG+TGG | + | chr4.3:63836790-63836809 | MS.gene79942:CDS | 35.0% | |
| TCAACTTTATCATTCCCCAT+CGG | - | chr4.3:63836842-63836861 | None:intergenic | 35.0% | |
| TCAGCAAATAGTGAAGTAAC+CGG | - | chr4.3:63836662-63836681 | None:intergenic | 35.0% | |
| TCTGTTTCAGATTCCTTTAG+TGG | - | chr4.3:63839340-63839359 | None:intergenic | 35.0% | |
| TCTTTCTCTGATATGGTTTG+GGG | + | chr4.3:63837701-63837720 | MS.gene79942:CDS | 35.0% | |
| TGAACAATCTGATGTACTTG+AGG | + | chr4.3:63836976-63836995 | MS.gene79942:CDS | 35.0% | |
| TTGATATTGAACATGCCGAT+GGG | + | chr4.3:63836824-63836843 | MS.gene79942:CDS | 35.0% | |
| TTGGAAAGAGATTTCATGCA+CGG | + | chr4.3:63838912-63838931 | MS.gene79942:CDS | 35.0% | |
| TTGGTTACAAAAACCCGAAA+GGG | + | chr4.3:63841103-63841122 | MS.gene79942:CDS | 35.0% | |
| TTTAATATCATGGGCCACAA+TGG | - | chr4.3:63836540-63836559 | None:intergenic | 35.0% | |
| TTTCAAGGATACTATGCATC+CGG | + | chr4.3:63838420-63838439 | MS.gene79942:CDS | 35.0% | |
| TTTGATATTGAACATGCCGA+TGG | + | chr4.3:63836823-63836842 | MS.gene79942:CDS | 35.0% | |
| TTTGGTTACAAAAACCCGAA+AGG | + | chr4.3:63841102-63841121 | MS.gene79942:CDS | 35.0% | |
| ! | AAATAGTGTAGTGTCATTGG+TGG | - | chr4.3:63840282-63840301 | None:intergenic | 35.0% |
| ! | AAATTGGTGACTGTATTCGT+AGG | + | chr4.3:63838650-63838669 | MS.gene79942:CDS | 35.0% |
| ! | AACCAAATGTTTAGGCGTTT+TGG | + | chr4.3:63839313-63839332 | MS.gene79942:CDS | 35.0% |
| ! | AATTGGTGACTGTATTCGTA+GGG | + | chr4.3:63838651-63838670 | MS.gene79942:CDS | 35.0% |
| ! | AGTTGAAAAGTGCAATGCAA+AGG | + | chr4.3:63836904-63836923 | MS.gene79942:CDS | 35.0% |
| ! | ATATAACCAGGAGGTTTTTC+AGG | - | chr4.3:63839220-63839239 | None:intergenic | 35.0% |
| ! | ATCTCAGCTGAAGGATTTTA+GGG | + | chr4.3:63837862-63837881 | MS.gene79942:CDS | 35.0% |
| ! | ATGACTGTTTTGTGTGATGA+TGG | + | chr4.3:63840516-63840535 | MS.gene79942:intron | 35.0% |
| ! | ATTCAATGTAATCTCGGTGT+TGG | - | chr4.3:63837218-63837237 | None:intergenic | 35.0% |
| ! | CAGTCACCAATTTTAAACGA+TGG | - | chr4.3:63838643-63838662 | None:intergenic | 35.0% |
| ! | CATGATGGAAAGGAAAAACT+CGG | + | chr4.3:63837455-63837474 | MS.gene79942:CDS | 35.0% |
| ! | CGAGTTTTCTTTCTCTGATA+TGG | + | chr4.3:63837694-63837713 | MS.gene79942:CDS | 35.0% |
| ! | GTTGAGGGAATGTCAAATTT+TGG | + | chr4.3:63836746-63836765 | MS.gene79942:CDS | 35.0% |
| ! | TTTGGTGAATTTTTCCCTTC+GGG | + | chr4.3:63840844-63840863 | MS.gene79942:CDS | 35.0% |
| ! | TTTTCCTTTCCATCATGCAA+TGG | - | chr4.3:63837452-63837471 | None:intergenic | 35.0% |
| ! | TTTTCTTCCTGCTTAACTAG+TGG | + | chr4.3:63837104-63837123 | MS.gene79942:intron | 35.0% |
| !! | ACTGTTTCAGCTGATTTTGA+AGG | + | chr4.3:63840620-63840639 | MS.gene79942:CDS | 35.0% |
| !! | CATTCTGGAATGATTCTGAA+CGG | - | chr4.3:63837919-63837938 | None:intergenic | 35.0% |
| !! | GATGACTTTGAAATGCAAAC+TGG | + | chr4.3:63838574-63838593 | MS.gene79942:CDS | 35.0% |
| !! | GTTTGGTGAATTTTTCCCTT+CGG | + | chr4.3:63840843-63840862 | MS.gene79942:CDS | 35.0% |
| !! | TGAACTATTTCTGAACTACC+AGG | - | chr4.3:63837635-63837654 | None:intergenic | 35.0% |
| !!! | ATTTTTTGTCCTTGCAACAC+AGG | + | chr4.3:63840141-63840160 | MS.gene79942:intron | 35.0% |
| !!! | GATTTTTTTTCCCGGGAATA+GGG | - | chr4.3:63839175-63839194 | None:intergenic | 35.0% |
| !!! | GTGTTCTGATTTTTTTTCCC+GGG | - | chr4.3:63839182-63839201 | None:intergenic | 35.0% |
| !!! | TGATTTTTTTTCCCGGGAAT+AGG | - | chr4.3:63839176-63839195 | None:intergenic | 35.0% |
| !!! | TGCTATTTCGTTGCGTATTT+TGG | + | chr4.3:63837812-63837831 | MS.gene79942:CDS | 35.0% |
| !!! | TTTTATAGGTGTCGACATGT+CGG | + | chr4.3:63837256-63837275 | MS.gene79942:intron | 35.0% |
| !!! | TTTTTTGTCCTTGCAACACA+GGG | + | chr4.3:63840142-63840161 | MS.gene79942:intron | 35.0% |
| AAACTTATGAAGCGTGGACA+CGG | - | chr4.3:63837303-63837322 | None:intergenic | 40.0% | |
| AAAGATGCACTTATGAAGCC+TGG | + | chr4.3:63837614-63837633 | MS.gene79942:CDS | 40.0% | |
| AACGACATAGACCTCAATGT+TGG | - | chr4.3:63840212-63840231 | None:intergenic | 40.0% | |
| AACTCCTGTAGTCAATACTG+AGG | + | chr4.3:63838336-63838355 | MS.gene79942:CDS | 40.0% | |
| AAGAGATGAGTGACTCGTAT+TGG | + | chr4.3:63839004-63839023 | MS.gene79942:CDS | 40.0% | |
| AAGTGAAAACCTATCCATGG+TGG | + | chr4.3:63837726-63837745 | MS.gene79942:CDS | 40.0% | |
| AAGTTCATAACAAGCTCAGC+AGG | - | chr4.3:63839256-63839275 | None:intergenic | 40.0% | |
| ACACTATCTAAGTTGCCTAC+CGG | + | chr4.3:63838145-63838164 | MS.gene79942:CDS | 40.0% | |
| ACACTGGAGTGTAATTAAGC+TGG | - | chr4.3:63839477-63839496 | None:intergenic | 40.0% | |
| ACTCCTTTCGATGTGGAATA+TGG | + | chr4.3:63840239-63840258 | MS.gene79942:intron | 40.0% | |
| AGAAATAAGCATCACACGTG+GGG | + | chr4.3:63838063-63838082 | MS.gene79942:CDS | 40.0% | |
| AGCCATACTGTAGATAACAC+TGG | + | chr4.3:63838031-63838050 | MS.gene79942:CDS | 40.0% | |
| AGCTAGAAACTTATGAAGCG+TGG | - | chr4.3:63837309-63837328 | None:intergenic | 40.0% | |
| AGGGATCAAATAACCAACAC+AGG | + | chr4.3:63840161-63840180 | MS.gene79942:intron | 40.0% | |
| ATCAGAACACAATCATGCTG+AGG | + | chr4.3:63839192-63839211 | MS.gene79942:CDS | 40.0% | |
| ATCTCAAGACGAGTCGAATA+TGG | + | chr4.3:63837962-63837981 | MS.gene79942:CDS | 40.0% | |
| ATGTTATCATTCCGCCCAAT+CGG | - | chr4.3:63836719-63836738 | None:intergenic | 40.0% | |
| ATTGGAGCTTGAGATTGCTA+AGG | + | chr4.3:63838180-63838199 | MS.gene79942:CDS | 40.0% | |
| ATTTCATGCACGGATGAAGT+CGG | + | chr4.3:63838922-63838941 | MS.gene79942:CDS | 40.0% | |
| CAAGAAATAAGCATCACACG+TGG | + | chr4.3:63838061-63838080 | MS.gene79942:CDS | 40.0% | |
| CAGAAATAGTTCATCAGGCA+CGG | + | chr4.3:63837642-63837661 | MS.gene79942:CDS | 40.0% | |
| CTCAGCTGCTTGCATTTAAT+CGG | + | chr4.3:63838203-63838222 | MS.gene79942:CDS | 40.0% | |
| CTGCCAGCAGTAAAAAAAGA+AGG | + | chr4.3:63837671-63837690 | MS.gene79942:CDS | 40.0% | |
| GAAAGAATGTGTTTCGGAAC+AGG | + | chr4.3:63837511-63837530 | MS.gene79942:CDS | 40.0% | |
| GAAGATGAAGAAACTACCCA+TGG | + | chr4.3:63838951-63838970 | MS.gene79942:CDS | 40.0% | |
| GAATCTGAAGGACAACATCA+CGG | - | chr4.3:63840802-63840821 | None:intergenic | 40.0% | |
| GCAAAGTGAAAACCTATCCA+TGG | + | chr4.3:63837723-63837742 | MS.gene79942:CDS | 40.0% | |
| GCATTCTCGTCTATATAACC+AGG | - | chr4.3:63839232-63839251 | None:intergenic | 40.0% | |
| GCCATACTGTAGATAACACT+GGG | + | chr4.3:63838032-63838051 | MS.gene79942:CDS | 40.0% | |
| GGAGATTCTGTTAAAGGTGA+TGG | + | chr4.3:63836623-63836642 | MS.gene79942:CDS | 40.0% | |
| GGAGTCAAATATGAGGCAAA+AGG | + | chr4.3:63837481-63837500 | MS.gene79942:CDS | 40.0% | |
| GGGATCAAATAACCAACACA+GGG | + | chr4.3:63840162-63840181 | MS.gene79942:intron | 40.0% | |
| GGGTAGTTTCTTCATCTTCT+TGG | - | chr4.3:63838950-63838969 | None:intergenic | 40.0% | |
| GGTCATGATGAAGTCATTTG+TGG | + | chr4.3:63836602-63836621 | MS.gene79942:CDS | 40.0% | |
| GGTGGATGAATCTCAAAATG+TGG | + | chr4.3:63838084-63838103 | MS.gene79942:CDS | 40.0% | |
| GTCCAAAACGCCTAAACATT+TGG | - | chr4.3:63839318-63839337 | None:intergenic | 40.0% | |
| GTGATGTTGTCCTTCAGATT+CGG | + | chr4.3:63840801-63840820 | MS.gene79942:CDS | 40.0% | |
| GTTATTGTAACCGACCCTTT+CGG | - | chr4.3:63841143-63841162 | None:intergenic | 40.0% | |
| GTTTCAACCACTAGTTAAGC+AGG | - | chr4.3:63837114-63837133 | None:intergenic | 40.0% | |
| TAGCAATCTCAAGCTCCAAT+CGG | - | chr4.3:63838180-63838199 | None:intergenic | 40.0% | |
| TAGCTGCTAGCTAATTACTC+TGG | - | chr4.3:63839873-63839892 | None:intergenic | 40.0% | |
| TATTTGATCCCTGTGTTGCA+AGG | - | chr4.3:63840153-63840172 | None:intergenic | 40.0% | |
| TCACCATATTCCACATCGAA+AGG | - | chr4.3:63840245-63840264 | None:intergenic | 40.0% | |
| TCCCAGTGTTATCTACAGTA+TGG | - | chr4.3:63838036-63838055 | None:intergenic | 40.0% | |
| TCGGTTACAAAAACCCGAAA+GGG | + | chr4.3:63841126-63841145 | MS.gene79942:CDS | 40.0% | |
| TCGTCATACTCAACAGTTGT+AGG | - | chr4.3:63838748-63838767 | None:intergenic | 40.0% | |
| TCTCAAGACGAGTCGAATAT+GGG | + | chr4.3:63837963-63837982 | MS.gene79942:CDS | 40.0% | |
| TGATATTGAACATGCCGATG+GGG | + | chr4.3:63836825-63836844 | MS.gene79942:CDS | 40.0% | |
| TGCAACTTCAGAAACCATTG+TGG | + | chr4.3:63836523-63836542 | MS.gene79942:CDS | 40.0% | |
| TGGACAGATATTTGATCCCT+CGG | + | chr4.3:63837751-63837770 | MS.gene79942:CDS | 40.0% | |
| TGGTCTCGTAATGGTTGTTT+GGG | + | chr4.3:63840920-63840939 | MS.gene79942:CDS | 40.0% | |
| TGTGTTGCACAAAAACCCTT+TGG | + | chr4.3:63838817-63838836 | MS.gene79942:CDS | 40.0% | |
| TTAATTGTAGGCCCTATTCC+CGG | + | chr4.3:63839161-63839180 | MS.gene79942:CDS | 40.0% | |
| TTACAAAAACCCGAAAGGGT+CGG | + | chr4.3:63841107-63841126 | MS.gene79942:CDS | 40.0% | |
| TTATTGTAACCGACCCTTTC+GGG | - | chr4.3:63841142-63841161 | None:intergenic | 40.0% | |
| TTCCACATCGAAAGGAGTAA+TGG | - | chr4.3:63840237-63840256 | None:intergenic | 40.0% | |
| TTCCATTACTCCTTTCGATG+TGG | + | chr4.3:63840232-63840251 | MS.gene79942:intron | 40.0% | |
| TTCTCGTCTATATAACCAGG+AGG | - | chr4.3:63839229-63839248 | None:intergenic | 40.0% | |
| TTTCACCTGAACATTCCAAG+AGG | + | chr4.3:63838527-63838546 | MS.gene79942:CDS | 40.0% | |
| TTTCTTGTACAGCAGAGGTT+GGG | + | chr4.3:63841031-63841050 | MS.gene79942:intron | 40.0% | |
| ! | AATCTGGAGTCCCATTCATT+GGG | - | chr4.3:63838471-63838490 | None:intergenic | 40.0% |
| ! | ACGTCTTCGATCAGAAGTAT+CGG | - | chr4.3:63837185-63837204 | None:intergenic | 40.0% |
| ! | AGTGATGCTTGTAGTTCTGT+TGG | + | chr4.3:63837329-63837348 | MS.gene79942:intron | 40.0% |
| ! | CATCTCAGCTGAAGGATTTT+AGG | + | chr4.3:63837861-63837880 | MS.gene79942:CDS | 40.0% |
| ! | GGTTTTTCTGCAATGGATGT+TGG | - | chr4.3:63839071-63839090 | None:intergenic | 40.0% |
| ! | GTGTTTTTCTTGTACAGCAG+AGG | + | chr4.3:63841026-63841045 | MS.gene79942:intron | 40.0% |
| ! | GTTTTTGTAACCGACCCTTT+CGG | - | chr4.3:63841120-63841139 | None:intergenic | 40.0% |
| ! | TAAGAAGTGTGTAGATGCAG+AGG | + | chr4.3:63839396-63839415 | MS.gene79942:CDS | 40.0% |
| ! | TCGATTTTGTACATGCCGAT+TGG | + | chr4.3:63836701-63836720 | MS.gene79942:CDS | 40.0% |
| ! | TTGGTGAATTTTTCCCTTCG+GGG | + | chr4.3:63840845-63840864 | MS.gene79942:CDS | 40.0% |
| ! | TTGGTGACAGATCATTTGCA+TGG | + | chr4.3:63837831-63837850 | MS.gene79942:CDS | 40.0% |
| ! | TTGTTGGTGAAACCCTAGAT+GGG | + | chr4.3:63836564-63836583 | MS.gene79942:CDS | 40.0% |
| ! | TTTTCTTGTACAGCAGAGGT+TGG | + | chr4.3:63841030-63841049 | MS.gene79942:intron | 40.0% |
| ! | TTTTTGTAACCGACCCTTTC+GGG | - | chr4.3:63841119-63841138 | None:intergenic | 40.0% |
| !! | CGATTTTGTACATGCCGATT+GGG | + | chr4.3:63836702-63836721 | MS.gene79942:CDS | 40.0% |
| !! | GTTTCAGCTGATTTTGAAGG+TGG | + | chr4.3:63840623-63840642 | MS.gene79942:CDS | 40.0% |
| !! | TGATCCTCAGTATTGACTAC+AGG | - | chr4.3:63838343-63838362 | None:intergenic | 40.0% |
| !! | TGGTTAAGTCTTGTTTCCGA+AGG | - | chr4.3:63839298-63839317 | None:intergenic | 40.0% |
| !!! | TCGCCTTCTTTTTTTACTGC+TGG | - | chr4.3:63837677-63837696 | None:intergenic | 40.0% |
| AAACAGGAGGAGAGATGATG+CGG | - | chr4.3:63840551-63840570 | None:intergenic | 45.0% | |
| AACAATGGAACAGACCGCAA+AGG | + | chr4.3:63837045-63837064 | MS.gene79942:CDS | 45.0% | |
| AAGTCGACAGAGCAAGCAAA+CGG | + | chr4.3:63839359-63839378 | MS.gene79942:CDS | 45.0% | |
| ACATTCCACAGACCCATCTA+GGG | - | chr4.3:63836579-63836598 | None:intergenic | 45.0% | |
| AGCAGCCTTCCCATGATAAT+TGG | - | chr4.3:63839524-63839543 | None:intergenic | 45.0% | |
| AGCCAGCCGAAGTTAATTGT+AGG | + | chr4.3:63839149-63839168 | MS.gene79942:CDS | 45.0% | |
| AGGATGTCAGACCCAATGAA+TGG | + | chr4.3:63838457-63838476 | MS.gene79942:CDS | 45.0% | |
| ATAGCTGACAACGATGTGAG+TGG | + | chr4.3:63836935-63836954 | MS.gene79942:CDS | 45.0% | |
| ATCAACGACACCATCTGTCT+TGG | - | chr4.3:63838695-63838714 | None:intergenic | 45.0% | |
| ATCAGATACAGTTCCAGCCA+TGG | - | chr4.3:63838971-63838990 | None:intergenic | 45.0% | |
| ATGAAGAAACTACCCATGGC+TGG | + | chr4.3:63838955-63838974 | MS.gene79942:CDS | 45.0% | |
| ATTCTCGAGACGGTGATTGT+TGG | + | chr4.3:63838488-63838507 | MS.gene79942:CDS | 45.0% | |
| CAAAATCCCTTGCGAGGAAA+AGG | - | chr4.3:63840585-63840604 | None:intergenic | 45.0% | |
| CAACTCATTCCCAAGACAGA+TGG | + | chr4.3:63838682-63838701 | MS.gene79942:CDS | 45.0% | |
| CATCTGTCTTGGGAATGAGT+TGG | - | chr4.3:63838684-63838703 | None:intergenic | 45.0% | |
| CATTGCCATTGTCAATGACC+CGG | - | chr4.3:63839035-63839054 | None:intergenic | 45.0% | |
| CGAAGGAACAGAATTGACCT+CGG | - | chr4.3:63839281-63839300 | None:intergenic | 45.0% | |
| CGAGGTCAATTCTGTTCCTT+CGG | + | chr4.3:63839279-63839298 | MS.gene79942:CDS | 45.0% | |
| CTCGTAATGGTTGTTTGGGT+CGG | + | chr4.3:63840924-63840943 | MS.gene79942:CDS | 45.0% | |
| CTGTAATTGTGGCTGCTGAT+TGG | + | chr4.3:63838893-63838912 | MS.gene79942:CDS | 45.0% | |
| GAACAGACCGCAAAGGTTAA+AGG | + | chr4.3:63837052-63837071 | MS.gene79942:CDS | 45.0% | |
| GAATGTGTTTCGGAACAGGT+TGG | + | chr4.3:63837515-63837534 | MS.gene79942:CDS | 45.0% | |
| GAGGGATCAAATATCTGTCC+AGG | - | chr4.3:63837752-63837771 | None:intergenic | 45.0% | |
| GGAACAAGACACAAAACAGG+AGG | - | chr4.3:63840564-63840583 | None:intergenic | 45.0% | |
| GGATGTCAGACCCAATGAAT+GGG | + | chr4.3:63838458-63838477 | MS.gene79942:CDS | 45.0% | |
| GTCAATACTGAGGATCAAGC+TGG | + | chr4.3:63838346-63838365 | MS.gene79942:CDS | 45.0% | |
| GTCGGTTACAAAAACCCGAA+AGG | + | chr4.3:63841125-63841144 | MS.gene79942:CDS | 45.0% | |
| GTGGCTGTTTATGCTTGGTT+TGG | + | chr4.3:63840826-63840845 | MS.gene79942:CDS | 45.0% | |
| GTGGTCTCGTAATGGTTGTT+TGG | + | chr4.3:63840919-63840938 | MS.gene79942:CDS | 45.0% | |
| TAATTGTAGGCCCTATTCCC+GGG | + | chr4.3:63839162-63839181 | MS.gene79942:CDS | 45.0% | |
| TAGATGGGTCTGTGGAATGT+GGG | + | chr4.3:63836579-63836598 | MS.gene79942:CDS | 45.0% | |
| TAGGGCACATTTCTCCACAA+TGG | + | chr4.3:63837880-63837899 | MS.gene79942:CDS | 45.0% | |
| TCAACGACACCATCTGTCTT+GGG | - | chr4.3:63838694-63838713 | None:intergenic | 45.0% | |
| TCAGATACAGTTCCAGCCAT+GGG | - | chr4.3:63838970-63838989 | None:intergenic | 45.0% | |
| TCGTAATGGTTGTTTGGGTC+GGG | + | chr4.3:63840925-63840944 | MS.gene79942:CDS | 45.0% | |
| TCTCCACAATGGAAAAGCAG+AGG | + | chr4.3:63837891-63837910 | MS.gene79942:CDS | 45.0% | |
| TGGAATGTTCAGGTGAAACC+AGG | - | chr4.3:63838525-63838544 | None:intergenic | 45.0% | |
| TTCCATCATGCAATGGCACA+TGG | - | chr4.3:63837445-63837464 | None:intergenic | 45.0% | |
| TTCTGCAATGGATGTTGGAC+TGG | - | chr4.3:63839066-63839085 | None:intergenic | 45.0% | |
| TTCTGTTGGTGCAGGTTTGT+CGG | + | chr4.3:63837343-63837362 | MS.gene79942:intron | 45.0% | |
| TTCTTGTACAGCAGAGGTTG+GGG | + | chr4.3:63841032-63841051 | MS.gene79942:intron | 45.0% | |
| TTGCAGATCGCTGTTTGTGT+TGG | + | chr4.3:63840890-63840909 | MS.gene79942:CDS | 45.0% | |
| TTGCCAGAGATACAACGTTG+TGG | + | chr4.3:63838244-63838263 | MS.gene79942:CDS | 45.0% | |
| ! | CTCAATGTTGGTCTCTCACA+GGG | - | chr4.3:63840200-63840219 | None:intergenic | 45.0% |
| ! | CTTGTTCCTTTTCCTCGCAA+GGG | + | chr4.3:63840576-63840595 | MS.gene79942:intron | 45.0% |
| ! | GAATCTGGAGTCCCATTCAT+TGG | - | chr4.3:63838472-63838491 | None:intergenic | 45.0% |
| ! | GAATGAAGCATCTCAGCTGA+AGG | + | chr4.3:63837853-63837872 | MS.gene79942:CDS | 45.0% |
| ! | GTTGTTGGTGAAACCCTAGA+TGG | + | chr4.3:63836563-63836582 | MS.gene79942:CDS | 45.0% |
| ! | TCTTGTTCCTTTTCCTCGCA+AGG | + | chr4.3:63840575-63840594 | MS.gene79942:intron | 45.0% |
| ! | TGCCTTCGTGTTGGTATGTT+CGG | + | chr4.3:63840984-63841003 | MS.gene79942:intron | 45.0% |
| ! | TGTGCCATTGCATGATGGAA+AGG | + | chr4.3:63837445-63837464 | MS.gene79942:CDS | 45.0% |
| !! | CAATTAACTTCGGCTGGCTT+TGG | - | chr4.3:63839148-63839167 | None:intergenic | 45.0% |
| !! | GCTGATTTTGAAGGTGGTGA+CGG | + | chr4.3:63840629-63840648 | MS.gene79942:CDS | 45.0% |
| !! | GCTTGTTATGAACTTTGCCG+AGG | + | chr4.3:63839261-63839280 | MS.gene79942:CDS | 45.0% |
| !! | TAATCTCGGTGTTGGACACT+GGG | - | chr4.3:63837210-63837229 | None:intergenic | 45.0% |
| !! | TAGGCGTTTTGGACCACTAA+AGG | + | chr4.3:63839324-63839343 | MS.gene79942:CDS | 45.0% |
| !! | TTTTGTACATGCCGATTGGG+CGG | + | chr4.3:63836705-63836724 | MS.gene79942:CDS | 45.0% |
| AAAACCTATCCATGGTGGCC+TGG | + | chr4.3:63837731-63837750 | MS.gene79942:CDS | 50.0% | |
| AATAAGCATCACACGTGGGG+TGG | + | chr4.3:63838066-63838085 | MS.gene79942:CDS | 50.0% | |
| AATATCTGTCCAGGCCACCA+TGG | - | chr4.3:63837743-63837762 | None:intergenic | 50.0% | |
| AATCCTCCTTCGTGAGCTTC+CGG | + | chr4.3:63840709-63840728 | MS.gene79942:CDS | 50.0% | |
| ACAACCATTACGAGACCACC+AGG | - | chr4.3:63840918-63840937 | None:intergenic | 50.0% | |
| ACCCGAACATACCAACACGA+AGG | - | chr4.3:63840989-63841008 | None:intergenic | 50.0% | |
| ACTGACCGGGTCATTGACAA+TGG | + | chr4.3:63839027-63839046 | MS.gene79942:intron | 50.0% | |
| AGATGGGTCTGTGGAATGTG+GGG | + | chr4.3:63836580-63836599 | MS.gene79942:CDS | 50.0% | |
| AGTCGACAGAGCAAGCAAAC+GGG | + | chr4.3:63839360-63839379 | MS.gene79942:CDS | 50.0% | |
| ATCGTTCGTGTCGCAAGGAT+CGG | + | chr4.3:63840732-63840751 | MS.gene79942:CDS | 50.0% | |
| ATCTATGGCACTCCTCCTCT+TGG | - | chr4.3:63838545-63838564 | None:intergenic | 50.0% | |
| CAATCACCGTCTCGAGAATC+TGG | - | chr4.3:63838487-63838506 | None:intergenic | 50.0% | |
| CACATTCCACAGACCCATCT+AGG | - | chr4.3:63836580-63836599 | None:intergenic | 50.0% | |
| CACCTGAACATTCCAAGAGG+AGG | + | chr4.3:63838530-63838549 | MS.gene79942:CDS | 50.0% | |
| CCAGAGATACAACGTTGTGG+AGG | + | chr4.3:63838247-63838266 | MS.gene79942:CDS | 50.0% | |
| CCTCCACAACGTTGTATCTC+TGG | - | chr4.3:63838250-63838269 | None:intergenic | 50.0% | |
| CCTGTGAGAGACCAACATTG+AGG | + | chr4.3:63840198-63840217 | MS.gene79942:intron | 50.0% | |
| CTAGATGGGTCTGTGGAATG+TGG | + | chr4.3:63836578-63836597 | MS.gene79942:CDS | 50.0% | |
| CTATCTAAGTTGCCTACCGG+TGG | + | chr4.3:63838148-63838167 | MS.gene79942:CDS | 50.0% | |
| CTCCTCCTCTTGGAATGTTC+AGG | - | chr4.3:63838535-63838554 | None:intergenic | 50.0% | |
| GACGAACAAAATCCCTTGCG+AGG | - | chr4.3:63840591-63840610 | None:intergenic | 50.0% | |
| GGCCTACAATTAACTTCGGC+TGG | - | chr4.3:63839154-63839173 | None:intergenic | 50.0% | |
| GTGACTCGTATTGGACTGAC+CGG | + | chr4.3:63839013-63839032 | MS.gene79942:CDS | 50.0% | |
| TCAGGTGAAACCAGGTGATC+TGG | - | chr4.3:63838517-63838536 | None:intergenic | 50.0% | |
| TCGGCGAGGAGTCAAATATG+AGG | + | chr4.3:63837474-63837493 | MS.gene79942:CDS | 50.0% | |
| TCTTGTACAGCAGAGGTTGG+GGG | + | chr4.3:63841033-63841052 | MS.gene79942:intron | 50.0% | |
| TGAAACCCTAGATGGGTCTG+TGG | + | chr4.3:63836571-63836590 | MS.gene79942:CDS | 50.0% | |
| TGACTCGTATTGGACTGACC+GGG | + | chr4.3:63839014-63839033 | MS.gene79942:CDS | 50.0% | |
| TGGAAAGGAAAAACTCGGCG+AGG | + | chr4.3:63837460-63837479 | MS.gene79942:CDS | 50.0% | |
| TTGTCCTTCAGATTCGGCTG+TGG | + | chr4.3:63840807-63840826 | MS.gene79942:CDS | 50.0% | |
| TTGTTGGACTCCAGATCACC+TGG | + | chr4.3:63838504-63838523 | MS.gene79942:CDS | 50.0% | |
| TTTCGTAGCTGCCTTCGTGT+TGG | + | chr4.3:63840975-63840994 | MS.gene79942:intron | 50.0% | |
| ! | AGCCATGTGCCATTGCATGA+TGG | + | chr4.3:63837440-63837459 | MS.gene79942:CDS | 50.0% |
| ! | CCTCAATGTTGGTCTCTCAC+AGG | - | chr4.3:63840201-63840220 | None:intergenic | 50.0% |
| ! | GCCTTCGTGTTGGTATGTTC+GGG | + | chr4.3:63840985-63841004 | MS.gene79942:intron | 50.0% |
| ! | GCTTGTAGTTCTGTTGGTGC+AGG | + | chr4.3:63837335-63837354 | MS.gene79942:intron | 50.0% |
| ! | GTGTTGGTATGTTCGGGTCT+CGG | + | chr4.3:63840991-63841010 | MS.gene79942:intron | 50.0% |
| ! | TGGTTTGTGGTTGCTCTTGC+CGG | + | chr4.3:63840756-63840775 | MS.gene79942:CDS | 50.0% |
| !! | CTGTTTGTGTTGGTTCCTGG+TGG | + | chr4.3:63840900-63840919 | MS.gene79942:CDS | 50.0% |
| !! | GAACAGGTTGGTTCAGATGG+TGG | + | chr4.3:63837527-63837546 | MS.gene79942:CDS | 50.0% |
| !! | GCTCCTCTGCTTTTCCATTG+TGG | - | chr4.3:63837897-63837916 | None:intergenic | 50.0% |
| !! | GTAATCTCGGTGTTGGACAC+TGG | - | chr4.3:63837211-63837230 | None:intergenic | 50.0% |
| !! | TCGCTGTTTGTGTTGGTTCC+TGG | + | chr4.3:63840897-63840916 | MS.gene79942:CDS | 50.0% |
| !! | TCGGAACAGGTTGGTTCAGA+TGG | + | chr4.3:63837524-63837543 | MS.gene79942:CDS | 50.0% |
| !! | TTTGAAGGTGGTGACGGTCA+TGG | + | chr4.3:63840635-63840654 | MS.gene79942:CDS | 50.0% |
| AACGATCCGGAAGCTCACGA+AGG | - | chr4.3:63840718-63840737 | None:intergenic | 55.0% | |
| AAGCACACAGAGACCCCGAA+GGG | - | chr4.3:63840861-63840880 | None:intergenic | 55.0% | |
| AATCGGTCAAAGCCACCGGT+AGG | - | chr4.3:63838163-63838182 | None:intergenic | 55.0% | |
| ACAGCCACAGCCGAATCTGA+AGG | - | chr4.3:63840814-63840833 | None:intergenic | 55.0% | |
| ACGCCGGAGACTATAGGTGT+GGG | + | chr4.3:63840666-63840685 | MS.gene79942:CDS | 55.0% | |
| AGCAAGCAAACGGGCAAGAG+TGG | + | chr4.3:63839369-63839388 | MS.gene79942:CDS | 55.0% | |
| AGCGGAAGCAATCCCTGTGT+TGG | - | chr4.3:63840177-63840196 | None:intergenic | 55.0% | |
| AGGAGGAGAGATGATGCGGA+TGG | - | chr4.3:63840547-63840566 | None:intergenic | 55.0% | |
| AGGTTGGGGGCAACAGATCT+GGG | + | chr4.3:63841046-63841065 | MS.gene79942:CDS | 55.0% | |
| ATCCCTCGGATGCATCTGAG+CGG | + | chr4.3:63837765-63837784 | MS.gene79942:CDS | 55.0% | |
| CGGCTGTGGCTGTTTATGCT+TGG | + | chr4.3:63840821-63840840 | MS.gene79942:CDS | 55.0% | |
| CTCCAATCGGTCAAAGCCAC+CGG | - | chr4.3:63838167-63838186 | None:intergenic | 55.0% | |
| CTGCCCACACCTATAGTCTC+CGG | - | chr4.3:63840672-63840691 | None:intergenic | 55.0% | |
| GAGGCTCCTGAAAAACCTCC+TGG | + | chr4.3:63839211-63839230 | MS.gene79942:CDS | 55.0% | |
| GATGGGTCTGTGGAATGTGG+GGG | + | chr4.3:63836581-63836600 | MS.gene79942:CDS | 55.0% | |
| GCAGGTTTGTCGGCAGCTAT+TGG | + | chr4.3:63837353-63837372 | MS.gene79942:intron | 55.0% | |
| GGGACTCCAGATTCTCGAGA+CGG | + | chr4.3:63838478-63838497 | MS.gene79942:CDS | 55.0% | |
| GGTTCCTGGTGGTCTCGTAA+TGG | + | chr4.3:63840911-63840930 | MS.gene79942:CDS | 55.0% | |
| TCCTTGCGACACGAACGATC+CGG | - | chr4.3:63840731-63840750 | None:intergenic | 55.0% | |
| TCGTTCGTGTCGCAAGGATC+GGG | + | chr4.3:63840733-63840752 | MS.gene79942:CDS | 55.0% | |
| TTTGTGGTTGCTCTTGCCGG+CGG | + | chr4.3:63840759-63840778 | MS.gene79942:CDS | 55.0% | |
| ! | GCAGTGCAGCTTGCTTGTTG+CGG | + | chr4.3:63841076-63841095 | MS.gene79942:CDS | 55.0% |
| ! | GCTTGCTTGTTGCGGTGGTT+TGG | + | chr4.3:63841084-63841103 | MS.gene79942:CDS | 55.0% |
| ! | GGCTTTGGTGACTTAGCAGC+TGG | - | chr4.3:63839133-63839152 | None:intergenic | 55.0% |
| ! | GGTTGGTTCAGATGGTGGTC+AGG | + | chr4.3:63837532-63837551 | MS.gene79942:CDS | 55.0% |
| ! | TGTTGGTCTCTCACAGGGAG+CGG | - | chr4.3:63840195-63840214 | None:intergenic | 55.0% |
| !! | ACGTTGTGGAGGCGTTGACA+AGG | + | chr4.3:63838258-63838277 | MS.gene79942:CDS | 55.0% |
| !! | CGACATGTCGGTGTCATGTC+AGG | + | chr4.3:63837268-63837287 | MS.gene79942:intron | 55.0% |
| !! | GTCGGCAGCTATTGGTAGTG+AGG | + | chr4.3:63837361-63837380 | MS.gene79942:CDS | 55.0% |
| !! | TACCGGTGGCTTTGACCGAT+TGG | + | chr4.3:63838162-63838181 | MS.gene79942:CDS | 55.0% |
| CAAGCACACAGAGACCCCGA+AGG | - | chr4.3:63840862-63840881 | None:intergenic | 60.0% | |
| CGCAAGGATCGGGTGGTTTG+TGG | + | chr4.3:63840743-63840762 | MS.gene79942:CDS | 60.0% | |
| CTGTCCAGGCCACCATGGAT+AGG | - | chr4.3:63837738-63837757 | None:intergenic | 60.0% | |
| GACGCCGGAGACTATAGGTG+TGG | + | chr4.3:63840665-63840684 | MS.gene79942:CDS | 60.0% | |
| GAGGTTGGGGGCAACAGATC+TGG | + | chr4.3:63841045-63841064 | MS.gene79942:CDS | 60.0% | |
| GATCCGGAAGCTCACGAAGG+AGG | - | chr4.3:63840715-63840734 | None:intergenic | 60.0% | |
| GCTTCGACGCCGGAGACTAT+AGG | + | chr4.3:63840660-63840679 | MS.gene79942:CDS | 60.0% | |
| TCCCTCGGATGCATCTGAGC+GGG | + | chr4.3:63837766-63837785 | MS.gene79942:CDS | 60.0% | |
| TCCGGATCGTTCGTGTCGCA+AGG | + | chr4.3:63840727-63840746 | MS.gene79942:CDS | 60.0% | |
| TGGTTGTTTGGGTCGGGTCG+AGG | + | chr4.3:63840931-63840950 | MS.gene79942:CDS | 60.0% | |
| TGTTCGGGTCTCGGTGAGCT+TGG | + | chr4.3:63841000-63841019 | MS.gene79942:intron | 60.0% | |
| TTCGTGTCGCAAGGATCGGG+TGG | + | chr4.3:63840736-63840755 | MS.gene79942:CDS | 60.0% | |
| ! | GGTGACTTAGCAGCTGGCTC+TGG | - | chr4.3:63839127-63839146 | None:intergenic | 60.0% |
| ! | GTGCAGCTTGCTTGTTGCGG+TGG | + | chr4.3:63841079-63841098 | MS.gene79942:CDS | 60.0% |
| ! | TGATGGGGCGTTAGCTCGTC+CGG | + | chr4.3:63836640-63836659 | MS.gene79942:CDS | 60.0% |
| CACCGACGCGAAACAACCGC+CGG | - | chr4.3:63840778-63840797 | None:intergenic | 65.0% | |
| GCCCGCTCAGATGCATCCGA+GGG | - | chr4.3:63837770-63837789 | None:intergenic | 65.0% | |
| GGCTGGTGTTCGCAGGTTGC+TGG | + | chr4.3:63840952-63840971 | MS.gene79942:intron | 65.0% | |
| GGTCATGGCTGCTTCGACGC+CGG | + | chr4.3:63840650-63840669 | MS.gene79942:CDS | 65.0% | |
| TGCCCGCTCAGATGCATCCG+AGG | - | chr4.3:63837771-63837790 | None:intergenic | 65.0% | |
| TGTTTGGGTCGGGTCGAGGC+TGG | + | chr4.3:63840935-63840954 | MS.gene79942:CDS | 65.0% | |
| ! | TGCCGGCGGTTGTTTCGCGT+CGG | + | chr4.3:63840773-63840792 | MS.gene79942:CDS | 65.0% |
| GGGTCGAGGCTGGTGTTCGC+AGG | + | chr4.3:63840945-63840964 | MS.gene79942:CDS | 70.0% | |
| ! | CGGCGGTTGTTTCGCGTCGG+TGG | + | chr4.3:63840776-63840795 | MS.gene79942:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 63836488 | 63841166 | 63836488 | ID=MS.gene79942 |
| chr4.3 | mRNA | 63836488 | 63841166 | 63836488 | ID=MS.gene79942.t1;Parent=MS.gene79942 |
| chr4.3 | exon | 63836488 | 63837073 | 63836488 | ID=MS.gene79942.t1.exon1;Parent=MS.gene79942.t1 |
| chr4.3 | CDS | 63836488 | 63837073 | 63836488 | ID=cds.MS.gene79942.t1;Parent=MS.gene79942.t1 |
| chr4.3 | exon | 63837357 | 63839035 | 63837357 | ID=MS.gene79942.t1.exon2;Parent=MS.gene79942.t1 |
| chr4.3 | CDS | 63837357 | 63839035 | 63837357 | ID=cds.MS.gene79942.t1;Parent=MS.gene79942.t1 |
| chr4.3 | exon | 63839121 | 63839440 | 63839121 | ID=MS.gene79942.t1.exon3;Parent=MS.gene79942.t1 |
| chr4.3 | CDS | 63839121 | 63839440 | 63839121 | ID=cds.MS.gene79942.t1;Parent=MS.gene79942.t1 |
| chr4.3 | exon | 63840613 | 63840966 | 63840613 | ID=MS.gene79942.t1.exon4;Parent=MS.gene79942.t1 |
| chr4.3 | CDS | 63840613 | 63840966 | 63840613 | ID=cds.MS.gene79942.t1;Parent=MS.gene79942.t1 |
| chr4.3 | exon | 63841043 | 63841166 | 63841043 | ID=MS.gene79942.t1.exon5;Parent=MS.gene79942.t1 |
| chr4.3 | CDS | 63841043 | 63841166 | 63841043 | ID=cds.MS.gene79942.t1;Parent=MS.gene79942.t1 |
| Gene Sequence |
| Protein sequence |
