Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79943.t1 | XP_013455379.1 | 85.9 | 631 | 73 | 3 | 1 | 627 | 1 | 619 | 6.70E-289 | 1003.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79943.t1 | A4FUF0 | 40.0 | 90 | 49 | 3 | 326 | 415 | 10 | 94 | 4.8e-09 | 65.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79943.t1 | A0A072UU80 | 85.9 | 631 | 73 | 3 | 1 | 627 | 1 | 619 | 4.8e-289 | 1003.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92710 | MS.gene79943 | PPI |
| MS.gene75575 | MS.gene79943 | PPI |
| MS.gene79943 | MS.gene037044 | PPI |
| MS.gene045232 | MS.gene79943 | PPI |
| MS.gene067033 | MS.gene79943 | PPI |
| MS.gene24697 | MS.gene79943 | PPI |
| MS.gene045233 | MS.gene79943 | PPI |
| MS.gene79943 | MS.gene007196 | PPI |
| MS.gene95527 | MS.gene79943 | PPI |
| MS.gene79943 | MS.gene045235 | PPI |
| MS.gene79130 | MS.gene79943 | PPI |
| MS.gene79943 | MS.gene55120 | PPI |
| MS.gene050299 | MS.gene79943 | PPI |
| MS.gene07741 | MS.gene79943 | PPI |
| MS.gene46640 | MS.gene79943 | PPI |
| MS.gene77911 | MS.gene79943 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79943.t1 | MTR_4g036445 | 85.624 | 633 | 75 | 3 | 1 | 629 | 1 | 621 | 0.0 | 1100 |
| MS.gene79943.t1 | MTR_1g049120 | 62.343 | 956 | 265 | 17 | 15 | 921 | 8 | 917 | 0.0 | 1064 |
| MS.gene79943.t1 | MTR_2g047912 | 76.271 | 413 | 89 | 3 | 511 | 923 | 275 | 678 | 0.0 | 625 |
| MS.gene79943.t1 | MTR_2g047912 | 56.364 | 275 | 76 | 4 | 23 | 263 | 13 | 277 | 3.83e-75 | 260 |
| MS.gene79943.t1 | MTR_1g072780 | 50.290 | 690 | 289 | 18 | 260 | 921 | 310 | 973 | 0.0 | 594 |
| MS.gene79943.t1 | MTR_2g104120 | 32.800 | 625 | 351 | 18 | 322 | 923 | 258 | 836 | 3.79e-82 | 283 |
| MS.gene79943.t1 | MTR_1g066890 | 39.249 | 293 | 130 | 7 | 319 | 611 | 315 | 559 | 1.22e-54 | 205 |
| MS.gene79943.t1 | MTR_1g066890 | 36.970 | 165 | 93 | 3 | 760 | 923 | 758 | 912 | 1.15e-21 | 101 |
| MS.gene79943.t1 | MTR_2g104980 | 58.252 | 103 | 42 | 1 | 322 | 424 | 233 | 334 | 4.08e-36 | 143 |
| MS.gene79943.t1 | MTR_6g005840 | 35.484 | 186 | 116 | 4 | 321 | 505 | 271 | 453 | 9.87e-26 | 114 |
| MS.gene79943.t1 | MTR_6g005840 | 35.484 | 186 | 116 | 4 | 321 | 505 | 229 | 411 | 1.23e-25 | 114 |
| MS.gene79943.t1 | MTR_6g005960 | 35.484 | 186 | 116 | 4 | 321 | 505 | 211 | 393 | 2.11e-24 | 110 |
| MS.gene79943.t1 | MTR_7g113180 | 33.735 | 166 | 95 | 4 | 322 | 479 | 87 | 245 | 9.03e-22 | 102 |
| MS.gene79943.t1 | MTR_2g013200 | 51.923 | 104 | 22 | 5 | 63 | 165 | 69 | 145 | 3.58e-16 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79943.t1 | AT5G02950 | 32.143 | 616 | 299 | 17 | 325 | 911 | 98 | 623 | 3.40e-75 | 259 |
| MS.gene79943.t1 | AT5G02950 | 32.143 | 616 | 299 | 17 | 325 | 911 | 98 | 623 | 3.40e-75 | 259 |
| MS.gene79943.t1 | AT3G09670 | 51.813 | 193 | 91 | 2 | 321 | 512 | 196 | 387 | 2.56e-56 | 208 |
| MS.gene79943.t1 | AT3G09670 | 51.813 | 193 | 91 | 2 | 321 | 512 | 196 | 387 | 2.56e-56 | 208 |
| MS.gene79943.t1 | AT3G54760 | 37.342 | 316 | 167 | 6 | 604 | 918 | 457 | 742 | 2.57e-43 | 169 |
| MS.gene79943.t1 | AT3G54760 | 37.342 | 316 | 167 | 6 | 604 | 918 | 488 | 773 | 2.91e-43 | 169 |
| MS.gene79943.t1 | AT5G40340 | 39.888 | 178 | 101 | 6 | 322 | 497 | 125 | 298 | 6.19e-27 | 119 |
| MS.gene79943.t1 | AT5G40340 | 39.888 | 178 | 101 | 6 | 322 | 497 | 125 | 298 | 6.59e-27 | 119 |
| MS.gene79943.t1 | AT5G27650 | 33.155 | 187 | 115 | 6 | 322 | 501 | 171 | 354 | 5.28e-21 | 99.8 |
| MS.gene79943.t1 | AT3G05430 | 33.333 | 159 | 99 | 3 | 322 | 476 | 133 | 288 | 3.14e-20 | 97.4 |
| MS.gene79943.t1 | AT3G05430 | 33.333 | 159 | 99 | 3 | 322 | 476 | 133 | 288 | 3.17e-20 | 97.1 |
| MS.gene79943.t1 | AT3G27860 | 31.797 | 217 | 128 | 8 | 293 | 499 | 27 | 233 | 5.62e-16 | 83.2 |
| MS.gene79943.t1 | AT3G27860 | 31.797 | 217 | 128 | 8 | 293 | 499 | 27 | 233 | 5.62e-16 | 83.2 |
Find 193 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCACAAAGTTGTATTTC+TGG | 0.189172 | 4.3:-63825657 | None:intergenic |
| TTCTTTCTCTGATATGGTTT+GGG | 0.192247 | 4.3:+63825110 | MS.gene79943:CDS |
| TGCTATTTCGTTGCGTATTT+TGG | 0.192293 | 4.3:+63825222 | MS.gene79943:CDS |
| ACAAATCCATCGTTTAAAAT+TGG | 0.229699 | 4.3:+63826044 | MS.gene79943:CDS |
| ATCGATGTGAGTGGTGTTTC+TGG | 0.239625 | 4.3:+63824368 | MS.gene79943:CDS |
| AAGATATGAGTGACTCAAAT+TGG | 0.253085 | 4.3:+63826414 | MS.gene79943:CDS |
| GTCTCAAGACGAGTCGAATA+TGG | 0.258530 | 4.3:+63825372 | MS.gene79943:CDS |
| TTTCTTTCTCTGATATGGTT+TGG | 0.268068 | 4.3:+63825109 | MS.gene79943:CDS |
| AACCATATGTTTAGGCGTTT+TGG | 0.275299 | 4.3:+63826704 | MS.gene79943:CDS |
| GGTGATTCTGTTAAGGGTGC+TGG | 0.281698 | 4.3:+63824035 | MS.gene79943:CDS |
| CTCCTTCTCTTGGAATGTTC+AGG | 0.288105 | 4.3:-63825942 | None:intergenic |
| GTCTGTGGAATGTGGGGTTC+AGG | 0.296770 | 4.3:+63823992 | MS.gene79943:CDS |
| GAACAGACCGCAAAGGTTAA+AGG | 0.321406 | 4.3:+63824476 | MS.gene79943:CDS |
| CAATCACCGTCTCGAGAATC+TGG | 0.323985 | 4.3:-63825894 | None:intergenic |
| GCGCGCTACGGCCACGGCCA+CGG | 0.337841 | 4.3:-63824060 | None:intergenic |
| GGGTGCTGGGGCCGTGGCCG+TGG | 0.340328 | 4.3:+63824049 | MS.gene79943:CDS |
| GCAGGTTTGTCGGCAGCTAT+TGG | 0.362443 | 4.3:+63824763 | MS.gene79943:CDS |
| GAAGAAGAATTTAATGAAGC+TGG | 0.362869 | 4.3:+63824970 | MS.gene79943:CDS |
| GGCCGTGGCCGTAGCGCGCC+CGG | 0.368754 | 4.3:+63824064 | MS.gene79943:CDS |
| GACGACTTCGAAATGCAAAC+TGG | 0.369537 | 4.3:+63825984 | MS.gene79943:CDS |
| GAAAGAATGTGTTTCGGAAC+AGG | 0.376759 | 4.3:+63824921 | MS.gene79943:CDS |
| GGGTAGTTTCTTCATCCTCT+TGG | 0.377859 | 4.3:-63826357 | None:intergenic |
| TTCACTATTTGCTGAAATGT+TGG | 0.384639 | 4.3:+63824091 | MS.gene79943:CDS |
| CACATTCCACAGACCCATCT+AGG | 0.389260 | 4.3:-63823983 | None:intergenic |
| CAAACCTTAACCATATGTTT+AGG | 0.391917 | 4.3:+63826696 | MS.gene79943:CDS |
| GTGATTCTGTTAAGGGTGCT+GGG | 0.393629 | 4.3:+63824036 | MS.gene79943:CDS |
| CATATTCTATAAGTTTCATC+GGG | 0.394392 | 4.3:-63825527 | None:intergenic |
| AAGCACAGTCTATAGCATTC+TGG | 0.394919 | 4.3:-63825341 | None:intergenic |
| TTCTGTTGGTGCAGGTTTGT+CGG | 0.398560 | 4.3:+63824753 | MS.gene79943:CDS |
| TATCTTACCTTTAACCTTTG+CGG | 0.399233 | 4.3:-63824483 | None:intergenic |
| CATTTGTGGTGATTCTGTTA+AGG | 0.401846 | 4.3:+63824028 | MS.gene79943:CDS |
| ATTGATGTCACTCCTTCTCT+TGG | 0.404257 | 4.3:-63825952 | None:intergenic |
| ATTTGTGGTGATTCTGTTAA+GGG | 0.407472 | 4.3:+63824029 | MS.gene79943:CDS |
| ATCGTGTCATAGATGTCTTT+AGG | 0.408022 | 4.3:-63825414 | None:intergenic |
| CTGTAATTGTGGCTGCTGAT+TGG | 0.409494 | 4.3:+63826303 | MS.gene79943:CDS |
| ATCCATGGCAGAAGCAGAAA+AGG | 0.416193 | 4.3:+63823902 | None:intergenic |
| AAACTACCCATGGCTGGAAC+TGG | 0.419246 | 4.3:+63826371 | MS.gene79943:CDS |
| TCAGCAAATAGTGAAGTAAC+CGG | 0.419526 | 4.3:-63824083 | None:intergenic |
| TACTGGTGGCTTTGATCGAT+TGG | 0.421819 | 4.3:+63825572 | MS.gene79943:CDS |
| TCAGGTGAAACCAGGTGATC+TGG | 0.428952 | 4.3:-63825924 | None:intergenic |
| GTTAATCGTAGGCCATATTC+CGG | 0.429226 | 4.3:+63826551 | MS.gene79943:CDS |
| GAATCTGGAGTCCCATTCAT+TGG | 0.430347 | 4.3:-63825879 | None:intergenic |
| AACGCCTAAACATATGGTTA+AGG | 0.435287 | 4.3:-63826700 | None:intergenic |
| GGGAAAAGAAAACTAACATA+TGG | 0.436804 | 4.3:+63824991 | MS.gene79943:CDS |
| TGATATTGAACATGCCGATT+GGG | 0.449657 | 4.3:+63824249 | MS.gene79943:CDS |
| GTCCAAAACGCCTAAACATA+TGG | 0.451508 | 4.3:-63826706 | None:intergenic |
| CGATTAACTTGGGCTGGCTC+TGG | 0.452688 | 4.3:-63826536 | None:intergenic |
| AAAGCGTAAATGTAATTTCA+AGG | 0.454246 | 4.3:+63825815 | MS.gene79943:CDS |
| TGTTAAGGGTGCTGGGGCCG+TGG | 0.456262 | 4.3:+63824043 | MS.gene79943:CDS |
| TAGTTCAGAAATAGTTCATC+AGG | 0.456384 | 4.3:+63825047 | MS.gene79943:CDS |
| ATTGGGAATGATAAAGTTGA+TGG | 0.457044 | 4.3:+63824266 | MS.gene79943:CDS |
| TACTATGCATCCAGCAAAGA+AGG | 0.457588 | 4.3:+63825839 | MS.gene79943:CDS |
| TCAACATAATCAACAGTTGT+AGG | 0.458971 | 4.3:-63826155 | None:intergenic |
| GCTTGTAGTTCTGTTGGTGC+AGG | 0.459611 | 4.3:+63824745 | MS.gene79943:CDS |
| AAGAAGAATTTAATGAAGCT+GGG | 0.461918 | 4.3:+63824971 | MS.gene79943:CDS |
| GAAACATCCAATCCATTCTC+AGG | 0.469929 | 4.3:-63826131 | None:intergenic |
| TAGATGGGTCTGTGGAATGT+GGG | 0.472616 | 4.3:+63823985 | MS.gene79943:CDS |
| AAGTCGACAGAGCAAGCAAA+CGG | 0.474065 | 4.3:+63826750 | MS.gene79943:CDS |
| TCAACGTCTCCATCTGTCTT+CGG | 0.475054 | 4.3:-63826101 | None:intergenic |
| TCGGAACAGGTTGGTTCAGA+TGG | 0.478265 | 4.3:+63824934 | MS.gene79943:CDS |
| ACATATTCTATAAGTTTCAT+CGG | 0.479992 | 4.3:-63825528 | None:intergenic |
| ATGGTTAAGGTTTGTTTCTG+AGG | 0.480633 | 4.3:-63826687 | None:intergenic |
| ATTCTCGAGACGGTGATTGT+TGG | 0.483757 | 4.3:+63825898 | MS.gene79943:CDS |
| CATTCTGGAATGATTCTAAA+CGG | 0.484135 | 4.3:-63825326 | None:intergenic |
| GAACAATCTGACGTCCTTGA+GGG | 0.485201 | 4.3:+63824401 | MS.gene79943:CDS |
| TCTCAAGACGAGTCGAATAT+GGG | 0.485338 | 4.3:+63825373 | MS.gene79943:CDS |
| ATTCTTGAAATCAGAGAAGA+AGG | 0.488652 | 4.3:-63826279 | None:intergenic |
| GGCCTACGATTAACTTGGGC+TGG | 0.494128 | 4.3:-63826542 | None:intergenic |
| AACCGGGCGCGCTACGGCCA+CGG | 0.497207 | 4.3:-63824066 | None:intergenic |
| GAATGCTATAGACTGTGCTT+TGG | 0.497440 | 4.3:+63825344 | MS.gene79943:CDS |
| AGAACCTACCCATGGTGGCC+TGG | 0.498118 | 4.3:+63825141 | MS.gene79943:CDS |
| AGTGAAGATAGCATATCATC+TGG | 0.502758 | 4.3:-63826200 | None:intergenic |
| TTGTTGACAATGAACAAGAT+TGG | 0.505222 | 4.3:+63825703 | MS.gene79943:CDS |
| TTGTTGGACTCCAGATCACC+TGG | 0.505467 | 4.3:+63825914 | MS.gene79943:CDS |
| AGGACGTCAGACCCAATGAA+TGG | 0.506637 | 4.3:+63825867 | MS.gene79943:CDS |
| AAAGCTTTGAACACTGCACT+TGG | 0.506705 | 4.3:-63826881 | None:intergenic |
| CATTGTCATTGTCAATGACC+CGG | 0.508721 | 4.3:-63826442 | None:intergenic |
| TGTAGAGAAAGAATGTGTTT+CGG | 0.512683 | 4.3:+63824915 | MS.gene79943:CDS |
| TTGATATTGAACATGCCGAT+TGG | 0.513289 | 4.3:+63824248 | MS.gene79943:CDS |
| TCCCAGTGTTGTCTACAGTC+TGG | 0.514788 | 4.3:-63825443 | None:intergenic |
| AGTCGACAGAGCAAGCAAAC+GGG | 0.514954 | 4.3:+63826751 | MS.gene79943:CDS |
| GAATGAAGCATCTCAGCTAA+AGG | 0.515864 | 4.3:+63825263 | MS.gene79943:CDS |
| GATGTTGGTGAAACCCTAGA+TGG | 0.516405 | 4.3:+63823969 | MS.gene79943:CDS |
| TGATCGTCTGTATTAACTGC+AGG | 0.518820 | 4.3:-63825750 | None:intergenic |
| TCTTTCTCTGATATGGTTTG+GGG | 0.522638 | 4.3:+63825111 | MS.gene79943:CDS |
| ACACTATCTAAGTTGCCTAC+TGG | 0.524971 | 4.3:+63825555 | MS.gene79943:CDS |
| AAGTTCATAACAAGCTCAGC+AGG | 0.528013 | 4.3:-63826644 | None:intergenic |
| GGACGTCAGACCCAATGAAT+GGG | 0.528030 | 4.3:+63825868 | MS.gene79943:CDS |
| GGTTGGTTCAGATGGTGGTC+GGG | 0.528631 | 4.3:+63824942 | MS.gene79943:CDS |
| AATCTGGAGTCCCATTCATT+GGG | 0.529750 | 4.3:-63825878 | None:intergenic |
| TGGTTAAGGTTTGTTTCTGA+GGG | 0.530544 | 4.3:-63826686 | None:intergenic |
| GTCTAATATTGTTGATATCG+TGG | 0.534021 | 4.3:+63824214 | MS.gene79943:CDS |
| AAATTGGTGACTATATTCGT+AGG | 0.534916 | 4.3:+63826060 | MS.gene79943:CDS |
| CACTTGGAGTGTAATTAAGC+TGG | 0.535263 | 4.3:-63826865 | None:intergenic |
| GTGACTCAAATTGGACTGAC+CGG | 0.535526 | 4.3:+63826423 | MS.gene79943:CDS |
| GAGGGATCAAATATCTGTCC+AGG | 0.536371 | 4.3:-63825159 | None:intergenic |
| TTTCAAGAATTCTGTAATTG+TGG | 0.537467 | 4.3:+63826292 | MS.gene79943:CDS |
| ATTGTAGATGAAGTTGTTTG+TGG | 0.540117 | 4.3:+63824299 | MS.gene79943:CDS |
| TTGGTGACAAATCATTTGCA+TGG | 0.541342 | 4.3:+63825241 | MS.gene79943:CDS |
| AGCAAGCAAACGGGCAAGAG+TGG | 0.541526 | 4.3:+63826760 | MS.gene79943:CDS |
| CAGAAAAGTATATTCTCCAA+GGG | 0.541983 | 4.3:-63826243 | None:intergenic |
| TCAGAAAAGTATATTCTCCA+AGG | 0.544625 | 4.3:-63826244 | None:intergenic |
| TTTGCACATGCCGATTGGGG+GGG | 0.546602 | 4.3:+63824130 | MS.gene79943:CDS |
| GTTCATGATGAAGTCATTTG+TGG | 0.546872 | 4.3:+63824014 | MS.gene79943:CDS |
| CTAGGGTTTCACCAACATCA+TGG | 0.546967 | 4.3:-63823965 | None:intergenic |
| TGCCCACTCAGATGCATCTG+AGG | 0.546971 | 4.3:-63825178 | None:intergenic |
| TTCCATCATGCAACAGCACA+TGG | 0.548238 | 4.3:-63824852 | None:intergenic |
| AATATGGCCTACGATTAACT+TGG | 0.550585 | 4.3:-63826547 | None:intergenic |
| TCAACTTTATCATTCCCAAT+CGG | 0.551031 | 4.3:-63824263 | None:intergenic |
| AGTGATGCTTGTAGTTCTGT+TGG | 0.553428 | 4.3:+63824739 | MS.gene79943:CDS |
| CACCTGAACATTCCAAGAGA+AGG | 0.554732 | 4.3:+63825940 | MS.gene79943:CDS |
| ATGAAGAAACTACCCATGGC+TGG | 0.555254 | 4.3:+63826365 | MS.gene79943:CDS |
| GAACAGGTTGGTTCAGATGG+TGG | 0.560765 | 4.3:+63824937 | MS.gene79943:CDS |
| GGAGTCAAATATGAGGCAAA+AGG | 0.560804 | 4.3:+63824891 | MS.gene79943:CDS |
| CTAGATGGGTCTGTGGAATG+TGG | 0.562841 | 4.3:+63823984 | MS.gene79943:CDS |
| TCCATGGCAGAAGCAGAAAA+GGG | 0.563521 | 4.3:+63823903 | None:intergenic |
| TGAACTATTTCTGAACTACC+AGG | 0.564289 | 4.3:-63825042 | None:intergenic |
| ATCAGATCCAGTTCCAGCCA+TGG | 0.566118 | 4.3:-63826378 | None:intergenic |
| TGAAGTAACCGGGCGCGCTA+CGG | 0.567068 | 4.3:-63824072 | None:intergenic |
| TGGAATGTTCAGGTGAAACC+AGG | 0.567728 | 4.3:-63825932 | None:intergenic |
| TAAGAAGTGTGTAGATGCAG+AGG | 0.570718 | 4.3:+63826787 | MS.gene79943:CDS |
| TAGGGTTTCACCAACATCAT+GGG | 0.571441 | 4.3:-63823964 | None:intergenic |
| ATATCTGTCCAGGCCACCAT+GGG | 0.571967 | 4.3:-63825149 | None:intergenic |
| ACGACTTCGAAATGCAAACT+GGG | 0.572627 | 4.3:+63825985 | MS.gene79943:CDS |
| AGGTTGGTTCAGATGGTGGT+CGG | 0.574310 | 4.3:+63824941 | MS.gene79943:CDS |
| TGAACAATCTGACGTCCTTG+AGG | 0.574629 | 4.3:+63824400 | MS.gene79943:CDS |
| ACACTCAAATTACTGAGCAA+TGG | 0.575379 | 4.3:+63824827 | MS.gene79943:CDS |
| ATTCTGTGCACGGATATAGT+TGG | 0.576192 | 4.3:+63826332 | MS.gene79943:CDS |
| ACATTCCACAGACCCATCTA+GGG | 0.577354 | 4.3:-63823982 | None:intergenic |
| CAGAAATAGTTCATCAGGCA+CGG | 0.577908 | 4.3:+63825052 | MS.gene79943:CDS |
| GCCAGACTGTAGACAACACT+GGG | 0.580489 | 4.3:+63825442 | MS.gene79943:CDS |
| AATAAGCATCACACGTGGGG+TGG | 0.581145 | 4.3:+63825476 | MS.gene79943:CDS |
| AGATGGGTCTGTGGAATGTG+GGG | 0.582027 | 4.3:+63823986 | MS.gene79943:CDS |
| ATTGGAGCTTGAGATTGCTA+AGG | 0.583274 | 4.3:+63825590 | MS.gene79943:CDS |
| AATTGGTGACTATATTCGTA+GGG | 0.586383 | 4.3:+63826061 | MS.gene79943:CDS |
| ACCATTGTGGCCCATGATGT+TGG | 0.590779 | 4.3:+63823954 | MS.gene79943:CDS |
| GTTAATACAGACGATCAAGC+TGG | 0.592793 | 4.3:+63825756 | MS.gene79943:CDS |
| AAAGATGCACTTGTGAAGCC+TGG | 0.594983 | 4.3:+63825024 | MS.gene79943:CDS |
| GAATGTGTTTCGGAACAGGT+TGG | 0.597469 | 4.3:+63824925 | MS.gene79943:CDS |
| TGATAACATTGATGATGTTG+AGG | 0.597794 | 4.3:+63824154 | MS.gene79943:CDS |
| AGTTGAAAAGTGCTATTCAA+AGG | 0.598334 | 4.3:+63824328 | MS.gene79943:CDS |
| GAACTCATTCCGAAGACAGA+TGG | 0.599666 | 4.3:+63826092 | MS.gene79943:CDS |
| TCGGCGAGGAGTCAAATATG+AGG | 0.599713 | 4.3:+63824884 | MS.gene79943:CDS |
| GTCGGCAGCTATTGGTAGTG+AGG | 0.600055 | 4.3:+63824771 | MS.gene79943:CDS |
| TCAGATCCAGTTCCAGCCAT+GGG | 0.600255 | 4.3:-63826377 | None:intergenic |
| GCCCACTCAGATGCATCTGA+GGG | 0.601078 | 4.3:-63825177 | None:intergenic |
| TTCTGAAAGCAATCATGCTG+AGG | 0.603160 | 4.3:+63826583 | MS.gene79943:CDS |
| TAGGGCACATTTCTCCACAA+TGG | 0.604810 | 4.3:+63825290 | MS.gene79943:CDS |
| GATAAAGTTGATGGCAAAGG+CGG | 0.607171 | 4.3:+63824275 | MS.gene79943:CDS |
| ACCAACATCATGGGCCACAA+TGG | 0.610071 | 4.3:-63823955 | None:intergenic |
| AACAATCTGACGTCCTTGAG+GGG | 0.613239 | 4.3:+63824402 | MS.gene79943:CDS |
| AGCCATGTGCTGTTGCATGA+TGG | 0.616493 | 4.3:+63824850 | MS.gene79943:CDS |
| GCATTCTCATCTATATAACC+AGG | 0.616725 | 4.3:-63826620 | None:intergenic |
| TCCCTCAGATGCATCTGAGT+GGG | 0.618148 | 4.3:+63825176 | MS.gene79943:CDS |
| CCAGAAATACAACTTTGTGA+AGG | 0.619620 | 4.3:+63825657 | MS.gene79943:CDS |
| AATGATAAAGTTGATGGCAA+AGG | 0.621210 | 4.3:+63824272 | MS.gene79943:CDS |
| AACAGAAAGAAGTAAAACAA+TGG | 0.622125 | 4.3:+63824454 | MS.gene79943:CDS |
| CGGATATAGTTGGCACCAAG+AGG | 0.622839 | 4.3:+63826342 | MS.gene79943:CDS |
| TGACTCAAATTGGACTGACC+GGG | 0.622964 | 4.3:+63826424 | MS.gene79943:CDS |
| CTGTCCAGGCCACCATGGGT+AGG | 0.623900 | 4.3:-63825145 | None:intergenic |
| CTATCTAAGTTGCCTACTGG+TGG | 0.624727 | 4.3:+63825558 | MS.gene79943:CDS |
| CAGCAAATAGTGAAGTAACC+GGG | 0.625141 | 4.3:-63824082 | None:intergenic |
| TTGGAAAGAGATTCTGTGCA+CGG | 0.625171 | 4.3:+63826322 | MS.gene79943:CDS |
| ACTTTGTGAAGGCGTTGACA+AGG | 0.626364 | 4.3:+63825668 | MS.gene79943:CDS |
| ATATGGCCTACGATTAACTT+GGG | 0.629330 | 4.3:-63826546 | None:intergenic |
| AGCCAGACTGTAGACAACAC+TGG | 0.630022 | 4.3:+63825441 | MS.gene79943:CDS |
| CATCTATTAGCATCCCCTCA+AGG | 0.633543 | 4.3:-63824415 | None:intergenic |
| AATCGATCAAAGCCACCAGT+AGG | 0.638533 | 4.3:-63825570 | None:intergenic |
| ATCCCTCAGATGCATCTGAG+TGG | 0.638881 | 4.3:+63825175 | MS.gene79943:CDS |
| GGGACTCCAGATTCTCGAGA+CGG | 0.640014 | 4.3:+63825888 | MS.gene79943:CDS |
| AACAATGGAACAGACCGCAA+AGG | 0.641264 | 4.3:+63824469 | MS.gene79943:CDS |
| AATATCTGTCCAGGCCACCA+TGG | 0.643849 | 4.3:-63825150 | None:intergenic |
| AAGAAATAAGCATCACACGT+GGG | 0.646392 | 4.3:+63825472 | MS.gene79943:CDS |
| AGAAATAAGCATCACACGTG+GGG | 0.647299 | 4.3:+63825473 | MS.gene79943:CDS |
| TGATTCTGTTAAGGGTGCTG+GGG | 0.649891 | 4.3:+63824037 | MS.gene79943:CDS |
| AGAAAAGTATATTCTCCAAG+GGG | 0.651247 | 4.3:-63826242 | None:intergenic |
| TGCAACTTCAGAAACCATTG+TGG | 0.658853 | 4.3:+63823941 | MS.gene79943:CDS |
| AGCCAGCCCAAGTTAATCGT+AGG | 0.659455 | 4.3:+63826540 | MS.gene79943:CDS |
| GGTGGATGAATCTCAAAATG+TGG | 0.659940 | 4.3:+63825494 | MS.gene79943:CDS |
| GCTTGTTATGAACTTTGCCG+AGG | 0.662578 | 4.3:+63826652 | MS.gene79943:CDS |
| TGAGGGAACAGAATTGACCT+CGG | 0.667524 | 4.3:-63826669 | None:intergenic |
| TCTCCACAATGGAAAAGCAG+AGG | 0.668805 | 4.3:+63825301 | MS.gene79943:CDS |
| CAAGAAATAAGCATCACACG+TGG | 0.672704 | 4.3:+63825471 | MS.gene79943:CDS |
| GCAAAGTGAGAACCTACCCA+TGG | 0.672895 | 4.3:+63825133 | MS.gene79943:CDS |
| TTCTCATCTATATAACCAGG+AGG | 0.679754 | 4.3:-63826617 | None:intergenic |
| ATGTTGGTGAAACCCTAGAT+GGG | 0.684018 | 4.3:+63823970 | MS.gene79943:CDS |
| GAGGATGAAGAAACTACCCA+TGG | 0.684673 | 4.3:+63826361 | MS.gene79943:CDS |
| AAGTGAGAACCTACCCATGG+TGG | 0.686895 | 4.3:+63825136 | MS.gene79943:CDS |
| CAATGAACAAGATTGGTGCG+AGG | 0.693330 | 4.3:+63825710 | MS.gene79943:CDS |
| TGAAACCCTAGATGGGTCTG+TGG | 0.694469 | 4.3:+63823977 | MS.gene79943:CDS |
| ATAGCTGACATCGATGTGAG+TGG | 0.730677 | 4.3:+63824359 | MS.gene79943:CDS |
| ATATTCTATAAGTTTCATCG+GGG | 0.738354 | 4.3:-63825526 | None:intergenic |
| ATAGATGTTGAAGATCAACA+AGG | 0.760784 | 4.3:+63824431 | MS.gene79943:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTGATTTTTTAAATTTCT+CGG | - | chr4.3:63825783-63825802 | None:intergenic | 15.0% |
| !!! | TTTTGTCATCAAAATTTTAT+CGG | + | chr4.3:63824666-63824685 | MS.gene79943:intron | 15.0% |
| !! | ACATATTCTATAAGTTTCAT+CGG | - | chr4.3:63825531-63825550 | None:intergenic | 20.0% |
| ! | AAAGCGTAAATGTAATTTCA+AGG | + | chr4.3:63825815-63825834 | MS.gene79943:CDS | 25.0% |
| ! | AACAGAAAGAAGTAAAACAA+TGG | + | chr4.3:63824454-63824473 | MS.gene79943:CDS | 25.0% |
| ! | AAGAAGAATTTAATGAAGCT+GGG | + | chr4.3:63824971-63824990 | MS.gene79943:CDS | 25.0% |
| ! | ATATTCTATAAGTTTCATCG+GGG | - | chr4.3:63825529-63825548 | None:intergenic | 25.0% |
| ! | CATATTCTATAAGTTTCATC+GGG | - | chr4.3:63825530-63825549 | None:intergenic | 25.0% |
| ! | GCTAAAAAGTTCAACATATT+TGG | + | chr4.3:63826824-63826843 | MS.gene79943:CDS | 25.0% |
| ! | TTTCAAGAATTCTGTAATTG+TGG | + | chr4.3:63826292-63826311 | MS.gene79943:CDS | 25.0% |
| !! | AATTACATTTACGCTTTTGA+TGG | - | chr4.3:63825812-63825831 | None:intergenic | 25.0% |
| !! | ACAAATCCATCGTTTAAAAT+TGG | + | chr4.3:63826044-63826063 | MS.gene79943:CDS | 25.0% |
| !! | ATTACATTTACGCTTTTGAT+GGG | - | chr4.3:63825811-63825830 | None:intergenic | 25.0% |
| !!! | AATTTTAAACGATGGATTTG+TGG | - | chr4.3:63826045-63826064 | None:intergenic | 25.0% |
| AAGATATGAGTGACTCAAAT+TGG | + | chr4.3:63826414-63826433 | MS.gene79943:CDS | 30.0% | |
| ACTGGGAAAAATACAATTTC+TGG | + | chr4.3:63826002-63826021 | MS.gene79943:CDS | 30.0% | |
| ATAGATGTTGAAGATCAACA+AGG | + | chr4.3:63824431-63824450 | MS.gene79943:CDS | 30.0% | |
| ATTCTTGAAATCAGAGAAGA+AGG | - | chr4.3:63826282-63826301 | None:intergenic | 30.0% | |
| ATTGGGAATGATAAAGTTGA+TGG | + | chr4.3:63824266-63824285 | MS.gene79943:CDS | 30.0% | |
| ATTGTAGATGAAGTTGTTTG+TGG | + | chr4.3:63824299-63824318 | MS.gene79943:CDS | 30.0% | |
| ATTTGTGGTGATTCTGTTAA+GGG | + | chr4.3:63824029-63824048 | MS.gene79943:CDS | 30.0% | |
| CAAACCTTAACCATATGTTT+AGG | + | chr4.3:63826696-63826715 | MS.gene79943:CDS | 30.0% | |
| CAGAAAAAAGACAAACTACT+TGG | + | chr4.3:63826500-63826519 | MS.gene79943:CDS | 30.0% | |
| GAAGAAGAATTTAATGAAGC+TGG | + | chr4.3:63824970-63824989 | MS.gene79943:CDS | 30.0% | |
| GGGAAAAGAAAACTAACATA+TGG | + | chr4.3:63824991-63825010 | MS.gene79943:CDS | 30.0% | |
| GTCTAATATTGTTGATATCG+TGG | + | chr4.3:63824214-63824233 | MS.gene79943:CDS | 30.0% | |
| TAGTTCAGAAATAGTTCATC+AGG | + | chr4.3:63825047-63825066 | MS.gene79943:CDS | 30.0% | |
| TATCTTACCTTTAACCTTTG+CGG | - | chr4.3:63824486-63824505 | None:intergenic | 30.0% | |
| TCAACATAATCAACAGTTGT+AGG | - | chr4.3:63826158-63826177 | None:intergenic | 30.0% | |
| TCAACTTTATCATTCCCAAT+CGG | - | chr4.3:63824266-63824285 | None:intergenic | 30.0% | |
| TGTAGAGAAAGAATGTGTTT+CGG | + | chr4.3:63824915-63824934 | MS.gene79943:CDS | 30.0% | |
| TTCAATGTAATCACAAGTGT+CGG | - | chr4.3:63824646-63824665 | None:intergenic | 30.0% | |
| TTCTTTCTCTGATATGGTTT+GGG | + | chr4.3:63825110-63825129 | MS.gene79943:CDS | 30.0% | |
| TTGTTGACAATGAACAAGAT+TGG | + | chr4.3:63825703-63825722 | MS.gene79943:CDS | 30.0% | |
| TTTCTTTCTCTGATATGGTT+TGG | + | chr4.3:63825109-63825128 | MS.gene79943:CDS | 30.0% | |
| ! | AAATTGGTGACTATATTCGT+AGG | + | chr4.3:63826060-63826079 | MS.gene79943:CDS | 30.0% |
| ! | AATTGGTGACTATATTCGTA+GGG | + | chr4.3:63826061-63826080 | MS.gene79943:CDS | 30.0% |
| ! | AGAAAAGTATATTCTCCAAG+GGG | - | chr4.3:63826245-63826264 | None:intergenic | 30.0% |
| ! | ATCTCAGCTAAAGGATTTTA+GGG | + | chr4.3:63825272-63825291 | MS.gene79943:CDS | 30.0% |
| ! | CAGAAAAGTATATTCTCCAA+GGG | - | chr4.3:63826246-63826265 | None:intergenic | 30.0% |
| ! | CATGATGGAAAAGAAAAACT+CGG | + | chr4.3:63824865-63824884 | MS.gene79943:CDS | 30.0% |
| ! | GGAGAATATACTTTTCTGAA+TGG | + | chr4.3:63826248-63826267 | MS.gene79943:CDS | 30.0% |
| ! | TAGTCACCAATTTTAAACGA+TGG | - | chr4.3:63826053-63826072 | None:intergenic | 30.0% |
| ! | TCAGAAAAGTATATTCTCCA+AGG | - | chr4.3:63826247-63826266 | None:intergenic | 30.0% |
| ! | TGAGGAAATGTCAAATTTTG+TGG | + | chr4.3:63824172-63824191 | MS.gene79943:CDS | 30.0% |
| ! | TTCACTATTTGCTGAAATGT+TGG | + | chr4.3:63824091-63824110 | MS.gene79943:CDS | 30.0% |
| !! | AATGATAAAGTTGATGGCAA+AGG | + | chr4.3:63824272-63824291 | MS.gene79943:CDS | 30.0% |
| !! | AGTTGAAAAGTGCTATTCAA+AGG | + | chr4.3:63824328-63824347 | MS.gene79943:CDS | 30.0% |
| !! | CATTCTGGAATGATTCTAAA+CGG | - | chr4.3:63825329-63825348 | None:intergenic | 30.0% |
| !! | TGATAACATTGATGATGTTG+AGG | + | chr4.3:63824154-63824173 | MS.gene79943:CDS | 30.0% |
| !!! | CAAGTAGTTTGTCTTTTTTC+TGG | - | chr4.3:63826502-63826521 | None:intergenic | 30.0% |
| !!! | GATTGCTTTCAGAACTTTTT+TGG | - | chr4.3:63826577-63826596 | None:intergenic | 30.0% |
| !!! | TTTTTCTGGTTTTTCTGCAA+TGG | - | chr4.3:63826488-63826507 | None:intergenic | 30.0% |
| AACGCCTAAACATATGGTTA+AGG | - | chr4.3:63826703-63826722 | None:intergenic | 35.0% | |
| AAGAAATAAGCATCACACGT+GGG | + | chr4.3:63825472-63825491 | MS.gene79943:CDS | 35.0% | |
| AATATGGCCTACGATTAACT+TGG | - | chr4.3:63826550-63826569 | None:intergenic | 35.0% | |
| ACACTCAAATTACTGAGCAA+TGG | + | chr4.3:63824827-63824846 | MS.gene79943:CDS | 35.0% | |
| AGTGAAGATAGCATATCATC+TGG | - | chr4.3:63826203-63826222 | None:intergenic | 35.0% | |
| ATATGGCCTACGATTAACTT+GGG | - | chr4.3:63826549-63826568 | None:intergenic | 35.0% | |
| ATCCAGCAAAGAAGGAAAAA+AGG | + | chr4.3:63825847-63825866 | MS.gene79943:CDS | 35.0% | |
| ATCGTGTCATAGATGTCTTT+AGG | - | chr4.3:63825417-63825436 | None:intergenic | 35.0% | |
| CATTTGTGGTGATTCTGTTA+AGG | + | chr4.3:63824028-63824047 | MS.gene79943:CDS | 35.0% | |
| CCAGAAATACAACTTTGTGA+AGG | + | chr4.3:63825657-63825676 | MS.gene79943:CDS | 35.0% | |
| CCTTCACAAAGTTGTATTTC+TGG | - | chr4.3:63825660-63825679 | None:intergenic | 35.0% | |
| GCATTCTCATCTATATAACC+AGG | - | chr4.3:63826623-63826642 | None:intergenic | 35.0% | |
| GTTCATGATGAAGTCATTTG+TGG | + | chr4.3:63824014-63824033 | MS.gene79943:CDS | 35.0% | |
| TCAGCAAATAGTGAAGTAAC+CGG | - | chr4.3:63824086-63824105 | None:intergenic | 35.0% | |
| TCTTTCTCTGATATGGTTTG+GGG | + | chr4.3:63825111-63825130 | MS.gene79943:CDS | 35.0% | |
| TTCTCATCTATATAACCAGG+AGG | - | chr4.3:63826620-63826639 | None:intergenic | 35.0% | |
| TTGATATTGAACATGCCGAT+TGG | + | chr4.3:63824248-63824267 | MS.gene79943:CDS | 35.0% | |
| TTTGTTTCCTGCTTAACTAG+TGG | + | chr4.3:63824526-63824545 | MS.gene79943:intron | 35.0% | |
| ! | AACCATATGTTTAGGCGTTT+TGG | + | chr4.3:63826704-63826723 | MS.gene79943:CDS | 35.0% |
| ! | ATATAACCAGGAGGTTTTTC+AGG | - | chr4.3:63826611-63826630 | None:intergenic | 35.0% |
| ! | CATCTCAGCTAAAGGATTTT+AGG | + | chr4.3:63825271-63825290 | MS.gene79943:CDS | 35.0% |
| ! | CGAGTTTTCTTTCTCTGATA+TGG | + | chr4.3:63825104-63825123 | MS.gene79943:CDS | 35.0% |
| ! | GTTGATGTTTTTCCTGAGAA+TGG | + | chr4.3:63826119-63826138 | MS.gene79943:CDS | 35.0% |
| ! | TGATATTGAACATGCCGATT+GGG | + | chr4.3:63824249-63824268 | MS.gene79943:CDS | 35.0% |
| ! | TGTTTTTCCTGAGAATGGAT+TGG | + | chr4.3:63826124-63826143 | MS.gene79943:CDS | 35.0% |
| ! | TTGGTGACAAATCATTTGCA+TGG | + | chr4.3:63825241-63825260 | MS.gene79943:CDS | 35.0% |
| !! | AATTTTATCGGTGTCTTGTC+AGG | + | chr4.3:63824678-63824697 | MS.gene79943:intron | 35.0% |
| !! | ATGGTTAAGGTTTGTTTCTG+AGG | - | chr4.3:63826690-63826709 | None:intergenic | 35.0% |
| !! | TGAACTATTTCTGAACTACC+AGG | - | chr4.3:63825045-63825064 | None:intergenic | 35.0% |
| !! | TGGTTAAGGTTTGTTTCTGA+GGG | - | chr4.3:63826689-63826708 | None:intergenic | 35.0% |
| !!! | TGCTATTTCGTTGCGTATTT+TGG | + | chr4.3:63825222-63825241 | MS.gene79943:CDS | 35.0% |
| AAGCACAGTCTATAGCATTC+TGG | - | chr4.3:63825344-63825363 | None:intergenic | 40.0% | |
| AAGTTCATAACAAGCTCAGC+AGG | - | chr4.3:63826647-63826666 | None:intergenic | 40.0% | |
| ACACTATCTAAGTTGCCTAC+TGG | + | chr4.3:63825555-63825574 | MS.gene79943:CDS | 40.0% | |
| ACGACTTCGAAATGCAAACT+GGG | + | chr4.3:63825985-63826004 | MS.gene79943:CDS | 40.0% | |
| AGAAATAAGCATCACACGTG+GGG | + | chr4.3:63825473-63825492 | MS.gene79943:CDS | 40.0% | |
| ATCTAGAAACCTGTGAAGCA+TGG | - | chr4.3:63824719-63824738 | None:intergenic | 40.0% | |
| ATTCTGTGCACGGATATAGT+TGG | + | chr4.3:63826332-63826351 | MS.gene79943:CDS | 40.0% | |
| ATTGATGTCACTCCTTCTCT+TGG | - | chr4.3:63825955-63825974 | None:intergenic | 40.0% | |
| ATTGGAGCTTGAGATTGCTA+AGG | + | chr4.3:63825590-63825609 | MS.gene79943:CDS | 40.0% | |
| CAAGAAATAAGCATCACACG+TGG | + | chr4.3:63825471-63825490 | MS.gene79943:CDS | 40.0% | |
| CACTTGGAGTGTAATTAAGC+TGG | - | chr4.3:63826868-63826887 | None:intergenic | 40.0% | |
| CAGAAATAGTTCATCAGGCA+CGG | + | chr4.3:63825052-63825071 | MS.gene79943:CDS | 40.0% | |
| CAGCAAATAGTGAAGTAACC+GGG | - | chr4.3:63824085-63824104 | None:intergenic | 40.0% | |
| CATTGTCATTGTCAATGACC+CGG | - | chr4.3:63826445-63826464 | None:intergenic | 40.0% | |
| CTGCCAGCAGTAAAAAAAGA+AGG | + | chr4.3:63825081-63825100 | MS.gene79943:CDS | 40.0% | |
| GAAACATCCAATCCATTCTC+AGG | - | chr4.3:63826134-63826153 | None:intergenic | 40.0% | |
| GAAAGAATGTGTTTCGGAAC+AGG | + | chr4.3:63824921-63824940 | MS.gene79943:CDS | 40.0% | |
| GAATGCTATAGACTGTGCTT+TGG | + | chr4.3:63825344-63825363 | MS.gene79943:CDS | 40.0% | |
| GGAGTCAAATATGAGGCAAA+AGG | + | chr4.3:63824891-63824910 | MS.gene79943:CDS | 40.0% | |
| GGTGGATGAATCTCAAAATG+TGG | + | chr4.3:63825494-63825513 | MS.gene79943:CDS | 40.0% | |
| GTCCAAAACGCCTAAACATA+TGG | - | chr4.3:63826709-63826728 | None:intergenic | 40.0% | |
| GTTAATACAGACGATCAAGC+TGG | + | chr4.3:63825756-63825775 | MS.gene79943:CDS | 40.0% | |
| GTTAATCGTAGGCCATATTC+CGG | + | chr4.3:63826551-63826570 | MS.gene79943:CDS | 40.0% | |
| GTTTCAACCACTAGTTAAGC+AGG | - | chr4.3:63824536-63824555 | None:intergenic | 40.0% | |
| TACTATGCATCCAGCAAAGA+AGG | + | chr4.3:63825839-63825858 | MS.gene79943:CDS | 40.0% | |
| TAGGGTTTCACCAACATCAT+GGG | - | chr4.3:63823967-63823986 | None:intergenic | 40.0% | |
| TCTCAAGACGAGTCGAATAT+GGG | + | chr4.3:63825373-63825392 | MS.gene79943:CDS | 40.0% | |
| TGATCGTCTGTATTAACTGC+AGG | - | chr4.3:63825753-63825772 | None:intergenic | 40.0% | |
| TGCAACTTCAGAAACCATTG+TGG | + | chr4.3:63823941-63823960 | MS.gene79943:CDS | 40.0% | |
| TTGGAAAGAGATTCTGTGCA+CGG | + | chr4.3:63826322-63826341 | MS.gene79943:CDS | 40.0% | |
| ! | AATCTGGAGTCCCATTCATT+GGG | - | chr4.3:63825881-63825900 | None:intergenic | 40.0% |
| ! | ACGTCTTCGATCAGAAGTAT+TGG | - | chr4.3:63824607-63824626 | None:intergenic | 40.0% |
| ! | AGTGATGCTTGTAGTTCTGT+TGG | + | chr4.3:63824739-63824758 | MS.gene79943:CDS | 40.0% |
| ! | ATGTTGGTGAAACCCTAGAT+GGG | + | chr4.3:63823970-63823989 | MS.gene79943:CDS | 40.0% |
| ! | GAATGAAGCATCTCAGCTAA+AGG | + | chr4.3:63825263-63825282 | MS.gene79943:CDS | 40.0% |
| ! | GGTTTTTCTGCAATGGATGT+TGG | - | chr4.3:63826481-63826500 | None:intergenic | 40.0% |
| ! | TAAGAAGTGTGTAGATGCAG+AGG | + | chr4.3:63826787-63826806 | MS.gene79943:CDS | 40.0% |
| ! | TTCTGAAAGCAATCATGCTG+AGG | + | chr4.3:63826583-63826602 | MS.gene79943:CDS | 40.0% |
| !! | AAAGCTTTGAACACTGCACT+TGG | - | chr4.3:63826884-63826903 | None:intergenic | 40.0% |
| !! | GATAAAGTTGATGGCAAAGG+CGG | + | chr4.3:63824275-63824294 | MS.gene79943:CDS | 40.0% |
| !!! | GAACTTTTTTGGCCGGAATA+TGG | - | chr4.3:63826566-63826585 | None:intergenic | 40.0% |
| !!! | GCTTTCAGAACTTTTTTGGC+CGG | - | chr4.3:63826573-63826592 | None:intergenic | 40.0% |
| !!! | GTCCTTTTTTCCTTCTTTGC+TGG | - | chr4.3:63825852-63825871 | None:intergenic | 40.0% |
| !!! | TCGCCTTCTTTTTTTACTGC+TGG | - | chr4.3:63825087-63825106 | None:intergenic | 40.0% |
| AAACCTGTGAAGCATGGACA+CGG | - | chr4.3:63824713-63824732 | None:intergenic | 45.0% | |
| AAAGATGCACTTGTGAAGCC+TGG | + | chr4.3:63825024-63825043 | MS.gene79943:CDS | 45.0% | |
| AACAATCTGACGTCCTTGAG+GGG | + | chr4.3:63824402-63824421 | MS.gene79943:CDS | 45.0% | |
| AACAATGGAACAGACCGCAA+AGG | + | chr4.3:63824469-63824488 | MS.gene79943:CDS | 45.0% | |
| AAGTCGACAGAGCAAGCAAA+CGG | + | chr4.3:63826750-63826769 | MS.gene79943:CDS | 45.0% | |
| AATCGATCAAAGCCACCAGT+AGG | - | chr4.3:63825573-63825592 | None:intergenic | 45.0% | |
| ACATTCCACAGACCCATCTA+GGG | - | chr4.3:63823985-63824004 | None:intergenic | 45.0% | |
| ATAGCTGACATCGATGTGAG+TGG | + | chr4.3:63824359-63824378 | MS.gene79943:CDS | 45.0% | |
| ATCGATGTGAGTGGTGTTTC+TGG | + | chr4.3:63824368-63824387 | MS.gene79943:CDS | 45.0% | |
| ATGAAGAAACTACCCATGGC+TGG | + | chr4.3:63826365-63826384 | MS.gene79943:CDS | 45.0% | |
| ATGTTATCATCCCCCCCAAT+CGG | - | chr4.3:63824143-63824162 | None:intergenic | 45.0% | |
| ATTCTCGAGACGGTGATTGT+TGG | + | chr4.3:63825898-63825917 | MS.gene79943:CDS | 45.0% | |
| CAATGAACAAGATTGGTGCG+AGG | + | chr4.3:63825710-63825729 | MS.gene79943:CDS | 45.0% | |
| CACCTGAACATTCCAAGAGA+AGG | + | chr4.3:63825940-63825959 | MS.gene79943:CDS | 45.0% | |
| CATCTATTAGCATCCCCTCA+AGG | - | chr4.3:63824418-63824437 | None:intergenic | 45.0% | |
| CTAGGGTTTCACCAACATCA+TGG | - | chr4.3:63823968-63823987 | None:intergenic | 45.0% | |
| CTATCTAAGTTGCCTACTGG+TGG | + | chr4.3:63825558-63825577 | MS.gene79943:CDS | 45.0% | |
| CTCCTTCTCTTGGAATGTTC+AGG | - | chr4.3:63825945-63825964 | None:intergenic | 45.0% | |
| CTGTAATTGTGGCTGCTGAT+TGG | + | chr4.3:63826303-63826322 | MS.gene79943:CDS | 45.0% | |
| GAACAATCTGACGTCCTTGA+GGG | + | chr4.3:63824401-63824420 | MS.gene79943:CDS | 45.0% | |
| GAACAGACCGCAAAGGTTAA+AGG | + | chr4.3:63824476-63824495 | MS.gene79943:CDS | 45.0% | |
| GAACTCATTCCGAAGACAGA+TGG | + | chr4.3:63826092-63826111 | MS.gene79943:CDS | 45.0% | |
| GAATGTGTTTCGGAACAGGT+TGG | + | chr4.3:63824925-63824944 | MS.gene79943:CDS | 45.0% | |
| GACGACTTCGAAATGCAAAC+TGG | + | chr4.3:63825984-63826003 | MS.gene79943:CDS | 45.0% | |
| GAGGATGAAGAAACTACCCA+TGG | + | chr4.3:63826361-63826380 | MS.gene79943:CDS | 45.0% | |
| GAGGGATCAAATATCTGTCC+AGG | - | chr4.3:63825162-63825181 | None:intergenic | 45.0% | |
| GGGTAGTTTCTTCATCCTCT+TGG | - | chr4.3:63826360-63826379 | None:intergenic | 45.0% | |
| GTCTCAAGACGAGTCGAATA+TGG | + | chr4.3:63825372-63825391 | MS.gene79943:CDS | 45.0% | |
| GTGACTCAAATTGGACTGAC+CGG | + | chr4.3:63826423-63826442 | MS.gene79943:CDS | 45.0% | |
| TAGATGGGTCTGTGGAATGT+GGG | + | chr4.3:63823985-63824004 | MS.gene79943:CDS | 45.0% | |
| TAGGGCACATTTCTCCACAA+TGG | + | chr4.3:63825290-63825309 | MS.gene79943:CDS | 45.0% | |
| TCAACGTCTCCATCTGTCTT+CGG | - | chr4.3:63826104-63826123 | None:intergenic | 45.0% | |
| TCTCCACAATGGAAAAGCAG+AGG | + | chr4.3:63825301-63825320 | MS.gene79943:CDS | 45.0% | |
| TGAACAATCTGACGTCCTTG+AGG | + | chr4.3:63824400-63824419 | MS.gene79943:CDS | 45.0% | |
| TGACTCAAATTGGACTGACC+GGG | + | chr4.3:63826424-63826443 | MS.gene79943:CDS | 45.0% | |
| TGAGGGAACAGAATTGACCT+CGG | - | chr4.3:63826672-63826691 | None:intergenic | 45.0% | |
| TGGAAAAGAAAAACTCGGCG+AGG | + | chr4.3:63824870-63824889 | MS.gene79943:CDS | 45.0% | |
| TGGAATGTTCAGGTGAAACC+AGG | - | chr4.3:63825935-63825954 | None:intergenic | 45.0% | |
| TGTGTTGCACAAAAACCCCT+TGG | + | chr4.3:63826227-63826246 | MS.gene79943:CDS | 45.0% | |
| TTCCATCATGCAACAGCACA+TGG | - | chr4.3:63824855-63824874 | None:intergenic | 45.0% | |
| TTCTGTTGGTGCAGGTTTGT+CGG | + | chr4.3:63824753-63824772 | MS.gene79943:CDS | 45.0% | |
| ! | CTCAGCTGCTTGCGTTTTAT+CGG | + | chr4.3:63825613-63825632 | MS.gene79943:CDS | 45.0% |
| ! | GAATCTGGAGTCCCATTCAT+TGG | - | chr4.3:63825882-63825901 | None:intergenic | 45.0% |
| ! | GATGTTGGTGAAACCCTAGA+TGG | + | chr4.3:63823969-63823988 | MS.gene79943:CDS | 45.0% |
| ! | TCGATTTTGCACATGCCGAT+TGG | + | chr4.3:63824125-63824144 | MS.gene79943:CDS | 45.0% |
| !! | ACTTTGTGAAGGCGTTGACA+AGG | + | chr4.3:63825668-63825687 | MS.gene79943:CDS | 45.0% |
| !! | ATTTTGCACATGCCGATTGG+GGG | + | chr4.3:63824128-63824147 | MS.gene79943:CDS | 45.0% |
| !! | CGATTTTGCACATGCCGATT+GGG | + | chr4.3:63824126-63824145 | MS.gene79943:CDS | 45.0% |
| !! | GATTTTGCACATGCCGATTG+GGG | + | chr4.3:63824127-63824146 | MS.gene79943:CDS | 45.0% |
| !! | GCTTGTTATGAACTTTGCCG+AGG | + | chr4.3:63826652-63826671 | MS.gene79943:CDS | 45.0% |
| !! | GTAATCACAAGTGTCGGTGT+CGG | - | chr4.3:63824640-63824659 | None:intergenic | 45.0% |
| !! | GTGATTCTGTTAAGGGTGCT+GGG | + | chr4.3:63824036-63824055 | MS.gene79943:CDS | 45.0% |
| !! | TACTGGTGGCTTTGATCGAT+TGG | + | chr4.3:63825572-63825591 | MS.gene79943:CDS | 45.0% |
| !! | TAGGCGTTTTGGACGACTAA+AGG | + | chr4.3:63826715-63826734 | MS.gene79943:CDS | 45.0% |
| !! | TGATTCTGTTAAGGGTGCTG+GGG | + | chr4.3:63824037-63824056 | MS.gene79943:CDS | 45.0% |
| AAACTACCCATGGCTGGAAC+TGG | + | chr4.3:63826371-63826390 | MS.gene79943:CDS | 50.0% | |
| AAGTGAGAACCTACCCATGG+TGG | + | chr4.3:63825136-63825155 | MS.gene79943:CDS | 50.0% | |
| AATAAGCATCACACGTGGGG+TGG | + | chr4.3:63825476-63825495 | MS.gene79943:CDS | 50.0% | |
| AATATCTGTCCAGGCCACCA+TGG | - | chr4.3:63825153-63825172 | None:intergenic | 50.0% | |
| ACCAACATCATGGGCCACAA+TGG | - | chr4.3:63823958-63823977 | None:intergenic | 50.0% | |
| ACCATTGTGGCCCATGATGT+TGG | + | chr4.3:63823954-63823973 | MS.gene79943:CDS | 50.0% | |
| AGATGGGTCTGTGGAATGTG+GGG | + | chr4.3:63823986-63824005 | MS.gene79943:CDS | 50.0% | |
| AGCCAGACTGTAGACAACAC+TGG | + | chr4.3:63825441-63825460 | MS.gene79943:CDS | 50.0% | |
| AGCCAGCCCAAGTTAATCGT+AGG | + | chr4.3:63826540-63826559 | MS.gene79943:CDS | 50.0% | |
| AGGACGTCAGACCCAATGAA+TGG | + | chr4.3:63825867-63825886 | MS.gene79943:CDS | 50.0% | |
| AGTCGACAGAGCAAGCAAAC+GGG | + | chr4.3:63826751-63826770 | MS.gene79943:CDS | 50.0% | |
| ATATCTGTCCAGGCCACCAT+GGG | - | chr4.3:63825152-63825171 | None:intergenic | 50.0% | |
| ATCAGATCCAGTTCCAGCCA+TGG | - | chr4.3:63826381-63826400 | None:intergenic | 50.0% | |
| ATCCCTCAGATGCATCTGAG+TGG | + | chr4.3:63825175-63825194 | MS.gene79943:CDS | 50.0% | |
| CAATCACCGTCTCGAGAATC+TGG | - | chr4.3:63825897-63825916 | None:intergenic | 50.0% | |
| CACATTCCACAGACCCATCT+AGG | - | chr4.3:63823986-63824005 | None:intergenic | 50.0% | |
| CGGATATAGTTGGCACCAAG+AGG | + | chr4.3:63826342-63826361 | MS.gene79943:CDS | 50.0% | |
| CTAGATGGGTCTGTGGAATG+TGG | + | chr4.3:63823984-63824003 | MS.gene79943:CDS | 50.0% | |
| GCAAAGTGAGAACCTACCCA+TGG | + | chr4.3:63825133-63825152 | MS.gene79943:CDS | 50.0% | |
| GCCAGACTGTAGACAACACT+GGG | + | chr4.3:63825442-63825461 | MS.gene79943:CDS | 50.0% | |
| GGACGTCAGACCCAATGAAT+GGG | + | chr4.3:63825868-63825887 | MS.gene79943:CDS | 50.0% | |
| TCAGATCCAGTTCCAGCCAT+GGG | - | chr4.3:63826380-63826399 | None:intergenic | 50.0% | |
| TCAGGTGAAACCAGGTGATC+TGG | - | chr4.3:63825927-63825946 | None:intergenic | 50.0% | |
| TCCCAGTGTTGTCTACAGTC+TGG | - | chr4.3:63825446-63825465 | None:intergenic | 50.0% | |
| TCCCTCAGATGCATCTGAGT+GGG | + | chr4.3:63825176-63825195 | MS.gene79943:CDS | 50.0% | |
| TCGGCGAGGAGTCAAATATG+AGG | + | chr4.3:63824884-63824903 | MS.gene79943:CDS | 50.0% | |
| TGAAACCCTAGATGGGTCTG+TGG | + | chr4.3:63823977-63823996 | MS.gene79943:CDS | 50.0% | |
| TTGTTGGACTCCAGATCACC+TGG | + | chr4.3:63825914-63825933 | MS.gene79943:CDS | 50.0% | |
| ! | AGCCATGTGCTGTTGCATGA+TGG | + | chr4.3:63824850-63824869 | MS.gene79943:CDS | 50.0% |
| ! | AGGTTGGTTCAGATGGTGGT+CGG | + | chr4.3:63824941-63824960 | MS.gene79943:CDS | 50.0% |
| ! | GCTTGTAGTTCTGTTGGTGC+AGG | + | chr4.3:63824745-63824764 | MS.gene79943:CDS | 50.0% |
| ! | GGTGATTCTGTTAAGGGTGC+TGG | + | chr4.3:63824035-63824054 | MS.gene79943:CDS | 50.0% |
| !! | GAACAGGTTGGTTCAGATGG+TGG | + | chr4.3:63824937-63824956 | MS.gene79943:CDS | 50.0% |
| !! | GCTCCTCTGCTTTTCCATTG+TGG | - | chr4.3:63825307-63825326 | None:intergenic | 50.0% |
| !! | TCGGAACAGGTTGGTTCAGA+TGG | + | chr4.3:63824934-63824953 | MS.gene79943:CDS | 50.0% |
| !! | TTTTGCACATGCCGATTGGG+GGG | + | chr4.3:63824129-63824148 | MS.gene79943:CDS | 50.0% |
| AGCAAGCAAACGGGCAAGAG+TGG | + | chr4.3:63826760-63826779 | MS.gene79943:CDS | 55.0% | |
| GAGGCTCCTGAAAAACCTCC+TGG | + | chr4.3:63826602-63826621 | MS.gene79943:CDS | 55.0% | |
| GCAGGTTTGTCGGCAGCTAT+TGG | + | chr4.3:63824763-63824782 | MS.gene79943:CDS | 55.0% | |
| GCCCACTCAGATGCATCTGA+GGG | - | chr4.3:63825180-63825199 | None:intergenic | 55.0% | |
| GGGACTCCAGATTCTCGAGA+CGG | + | chr4.3:63825888-63825907 | MS.gene79943:CDS | 55.0% | |
| GTCTGTGGAATGTGGGGTTC+AGG | + | chr4.3:63823992-63824011 | MS.gene79943:CDS | 55.0% | |
| TGCCCACTCAGATGCATCTG+AGG | - | chr4.3:63825181-63825200 | None:intergenic | 55.0% | |
| TGTCCGTGTCCATGCTTCAC+AGG | + | chr4.3:63824707-63824726 | MS.gene79943:intron | 55.0% | |
| ! | GGCCTACGATTAACTTGGGC+TGG | - | chr4.3:63826545-63826564 | None:intergenic | 55.0% |
| ! | GGTTGGTTCAGATGGTGGTC+GGG | + | chr4.3:63824942-63824961 | MS.gene79943:CDS | 55.0% |
| ! | TTTGCACATGCCGATTGGGG+GGG | + | chr4.3:63824130-63824149 | MS.gene79943:CDS | 55.0% |
| !! | CGATTAACTTGGGCTGGCTC+TGG | - | chr4.3:63826539-63826558 | None:intergenic | 55.0% |
| !! | GTCGGCAGCTATTGGTAGTG+AGG | + | chr4.3:63824771-63824790 | MS.gene79943:CDS | 55.0% |
| AGAACCTACCCATGGTGGCC+TGG | + | chr4.3:63825141-63825160 | MS.gene79943:CDS | 60.0% | |
| TGAAGTAACCGGGCGCGCTA+CGG | - | chr4.3:63824075-63824094 | None:intergenic | 60.0% | |
| !! | AAGTGTCGGTGTCGGACGCT+GGG | - | chr4.3:63824632-63824651 | None:intergenic | 60.0% |
| CTGTCCAGGCCACCATGGGT+AGG | - | chr4.3:63825148-63825167 | None:intergenic | 65.0% | |
| !! | CAAGTGTCGGTGTCGGACGC+TGG | - | chr4.3:63824633-63824652 | None:intergenic | 65.0% |
| !! | TGTTAAGGGTGCTGGGGCCG+TGG | + | chr4.3:63824043-63824062 | MS.gene79943:CDS | 65.0% |
| AACCGGGCGCGCTACGGCCA+CGG | - | chr4.3:63824069-63824088 | None:intergenic | 75.0% | |
| ! | GCGCGCTACGGCCACGGCCA+CGG | - | chr4.3:63824063-63824082 | None:intergenic | 80.0% |
| ! | GGCCGTGGCCGTAGCGCGCC+CGG | + | chr4.3:63824064-63824083 | MS.gene79943:CDS | 85.0% |
| !!! | GGGTGCTGGGGCCGTGGCCG+TGG | + | chr4.3:63824049-63824068 | MS.gene79943:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 63823906 | 63826922 | 63823906 | ID=MS.gene79943 |
| chr4.3 | mRNA | 63823906 | 63826922 | 63823906 | ID=MS.gene79943.t1;Parent=MS.gene79943 |
| chr4.3 | exon | 63823906 | 63824497 | 63823906 | ID=MS.gene79943.t1.exon1;Parent=MS.gene79943.t1 |
| chr4.3 | CDS | 63823906 | 63824497 | 63823906 | ID=cds.MS.gene79943.t1;Parent=MS.gene79943.t1 |
| chr4.3 | exon | 63824737 | 63826922 | 63824737 | ID=MS.gene79943.t1.exon2;Parent=MS.gene79943.t1 |
| chr4.3 | CDS | 63824737 | 63826922 | 63824737 | ID=cds.MS.gene79943.t1;Parent=MS.gene79943.t1 |
| Gene Sequence |
| Protein sequence |
