AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80168


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80168.t1 MTR_3g105760 95.664 715 15 2 1 715 1 699 0.0 1400
MS.gene80168.t1 MTR_4g026450 36.145 581 317 9 87 647 95 641 2.00e-122 382
MS.gene80168.t1 MTR_0053s0030 38.956 498 268 6 134 629 137 600 2.47e-114 360
MS.gene80168.t1 MTR_6g038750 39.228 492 265 7 131 620 123 582 4.62e-109 347
MS.gene80168.t1 MTR_1g046620 37.059 510 289 7 136 628 183 677 3.43e-103 333
MS.gene80168.t1 MTR_1g009860 35.343 481 294 6 136 611 130 598 4.38e-92 300
MS.gene80168.t1 MTR_1g009860 35.343 481 294 6 136 611 130 598 1.27e-91 299
MS.gene80168.t1 MTR_1g095480 33.991 456 268 5 140 573 203 647 6.96e-82 277
MS.gene80168.t1 MTR_1g095480 35.266 414 243 4 140 539 203 605 7.87e-80 267
MS.gene80168.t1 MTR_3g082750 37.692 390 226 4 134 518 198 575 5.76e-78 264
MS.gene80168.t1 MTR_3g094740 34.382 445 238 12 140 550 207 631 1.29e-69 242
MS.gene80168.t1 MTR_3g094740 34.382 445 238 12 140 550 207 631 1.95e-69 242
MS.gene80168.t1 MTR_8g091710 32.688 465 259 11 140 570 198 642 7.18e-69 240
MS.gene80168.t1 MTR_0224s0030 30.418 263 161 4 333 573 1 263 4.74e-39 146
MS.gene80168.t1 MTR_1g008980 27.068 399 277 9 124 518 41 429 7.19e-37 148
MS.gene80168.t1 MTR_5g077080 27.273 385 249 11 134 506 81 446 2.21e-33 135
MS.gene80168.t1 MTR_4g104070 29.971 347 197 12 117 435 39 367 3.16e-33 134
MS.gene80168.t1 MTR_5g068050 24.750 400 267 7 140 513 128 519 2.67e-31 129
MS.gene80168.t1 MTR_3g070410 29.762 252 169 3 135 385 85 329 5.55e-28 120
MS.gene80168.t1 MTR_4g091510 25.000 432 284 9 109 514 184 601 7.85e-28 119
MS.gene80168.t1 MTR_4g091510 25.000 432 284 9 109 514 189 606 8.56e-28 119
MS.gene80168.t1 MTR_8g464860 24.390 410 267 9 137 514 199 597 2.03e-25 112
MS.gene80168.t1 MTR_2g011640 24.427 393 263 8 143 514 272 651 9.76e-25 110
MS.gene80168.t1 MTR_1g085610 23.947 380 253 11 124 489 216 573 1.63e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80168.t1 AT5G24970 67.215 729 206 8 3 711 2 717 0.0 970
MS.gene80168.t1 AT5G24970 69.331 688 187 5 39 711 78 756 0.0 966
MS.gene80168.t1 AT5G24970 66.804 729 206 9 3 711 2 714 0.0 958
MS.gene80168.t1 AT1G79600 39.243 502 269 7 131 630 141 608 1.09e-119 375
MS.gene80168.t1 AT1G71810 38.192 542 294 8 89 622 65 573 5.77e-116 364
MS.gene80168.t1 AT3G24190 36.914 512 291 7 136 630 191 687 4.10e-99 323
MS.gene80168.t1 AT4G31390 36.581 503 290 10 136 627 166 650 2.38e-95 310
MS.gene80168.t1 AT4G31390 34.592 503 275 10 136 627 166 625 2.50e-85 283
MS.gene80168.t1 AT4G31390 35.684 468 272 10 171 627 2 451 5.09e-85 277
MS.gene80168.t1 AT2G39190 32.867 429 260 4 140 551 202 619 1.84e-74 257
MS.gene80168.t1 AT3G07700 35.678 398 236 5 129 518 177 562 3.06e-74 254
MS.gene80168.t1 AT3G07700 35.678 398 236 5 129 518 177 562 3.06e-74 254
MS.gene80168.t1 AT3G07700 35.678 398 236 5 129 518 177 562 3.06e-74 254
MS.gene80168.t1 AT3G07700 33.489 427 235 7 129 518 177 591 1.05e-68 239
MS.gene80168.t1 AT5G64940 33.413 416 230 9 140 520 222 625 6.16e-64 227
MS.gene80168.t1 AT5G64940 33.413 416 230 9 140 520 222 625 6.16e-64 227
MS.gene80168.t1 AT5G24810 26.733 303 217 3 135 435 96 395 1.81e-32 135
MS.gene80168.t1 AT1G65950 27.424 361 225 10 150 494 112 451 5.25e-32 130
MS.gene80168.t1 AT1G65950 27.548 363 226 10 150 496 112 453 9.27e-32 130
MS.gene80168.t1 AT5G50330 28.053 303 191 9 147 435 75 364 1.09e-31 129
MS.gene80168.t1 AT4G24810 26.374 364 230 10 95 434 14 363 3.48e-30 125
MS.gene80168.t1 AT4G24810 27.891 294 186 9 147 426 32 313 3.56e-30 122
MS.gene80168.t1 AT5G05200 24.500 400 268 6 140 513 129 520 4.01e-30 125
MS.gene80168.t1 AT4G24810 27.483 302 192 9 147 434 32 320 7.88e-30 123
MS.gene80168.t1 AT4G24810 27.483 302 192 9 147 434 32 320 7.88e-30 123
MS.gene80168.t1 AT2G39190 38.462 156 96 0 140 295 202 357 1.68e-29 121
MS.gene80168.t1 AT4G24810 28.159 277 174 8 147 410 32 296 5.26e-29 118
MS.gene80168.t1 AT4G24810 27.184 309 191 10 147 434 32 327 9.05e-28 117
MS.gene80168.t1 AT5G24810 24.551 334 216 5 135 435 96 426 9.35e-28 120
MS.gene80168.t1 AT5G50330 26.490 302 181 9 147 435 75 348 1.07e-26 114
MS.gene80168.t1 AT1G11390 23.750 400 271 6 143 520 219 606 1.63e-26 115
MS.gene80168.t1 AT2G40090 27.132 258 180 3 135 391 87 337 9.93e-23 103
MS.gene80168.t1 AT1G61640 23.291 395 267 8 143 514 216 597 1.72e-22 102
MS.gene80168.t1 AT1G61640 25.159 314 199 8 143 433 216 516 1.65e-19 93.6
MS.gene80168.t1 AT1G61640 29.448 163 104 4 143 295 216 377 1.20e-13 74.3

Find 151 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATAGTCCCAATATATTT+TGG 0.124853 3.4:+92354065 None:intergenic
GAATCACTGGAAAATAAATT+TGG 0.170233 3.4:-92358566 MS.gene80168:CDS
GGCAAATGACTTCCTTTCTT+TGG 0.174886 3.4:-92353044 MS.gene80168:CDS
CCTTCGCAAACCGTTTAAAT+TGG 0.209206 3.4:+92354842 None:intergenic
GTGATTGATTGTGCATTAAA+TGG 0.216408 3.4:-92351223 MS.gene80168:CDS
CATGAATAGAAGCACCAAAT+TGG 0.239350 3.4:+92355174 None:intergenic
CTCAAAATTCTTCTCATATC+AGG 0.250430 3.4:+92351947 None:intergenic
GCAAATGACTTCCTTTCTTT+GGG 0.259520 3.4:-92353043 MS.gene80168:CDS
TCAAAGCTCCCAAAATATAT+TGG 0.261791 3.4:-92354074 MS.gene80168:CDS
CTTGGGTCCTTTCTACATTA+AGG 0.265096 3.4:-92356460 MS.gene80168:intron
AGCCCTATACAAAGCCAAAA+AGG 0.282708 3.4:+92358487 None:intergenic
TTATTTCATTTCATGTCTTC+AGG 0.299658 3.4:-92358460 MS.gene80168:CDS
TCAAGAGCTTGCTAAATTAC+AGG 0.304551 3.4:-92355377 MS.gene80168:intron
ATAGTAAATTTGTGAACTTC+AGG 0.310511 3.4:+92350508 None:intergenic
GCTTTGCTGTTCCATATGAT+TGG 0.320639 3.4:-92354868 MS.gene80168:CDS
GTTACAGCTCATCTGCATTC+TGG 0.320870 3.4:-92354949 MS.gene80168:intron
AGTGCAACTGAGATTACTTT+AGG 0.322401 3.4:-92358837 MS.gene80168:CDS
AATAAATTTGGGATTACTCT+TGG 0.332032 3.4:-92358554 MS.gene80168:CDS
CTCCTCCTCCTTGCATAATC+AGG 0.333771 3.4:+92358590 None:intergenic
ATTGCAACATCAGTTGAAAA+TGG 0.333812 3.4:+92355212 None:intergenic
TCATTAGGACAGGTTTATAA+AGG 0.334663 3.4:-92355110 MS.gene80168:intron
AGATGTATCGAAACCCAATT+TGG 0.342391 3.4:-92355188 MS.gene80168:CDS
AATTCTCAAGCCCTTCTGTT+TGG 0.349573 3.4:-92351384 MS.gene80168:CDS
GAACTTGTCATTCGTAATAA+TGG 0.366162 3.4:-92351923 MS.gene80168:CDS
CTTTGCTGTTCCATATGATT+GGG 0.375820 3.4:-92354867 MS.gene80168:CDS
CAGTGAGTCTCAAGATTTCC+AGG 0.378705 3.4:-92352942 MS.gene80168:intron
AAATGTATATCAACCCCTTC+AGG 0.380628 3.4:+92353013 None:intergenic
CAAAGCTCCCAAAATATATT+GGG 0.384515 3.4:-92354073 MS.gene80168:CDS
GCGTTCTAGTCACAGATTGC+AGG 0.387424 3.4:-92350461 MS.gene80168:CDS
ATTCCTAGGCATTATCGTAT+TGG 0.390822 3.4:-92353581 MS.gene80168:CDS
GAAATCGATTATGTCCTAGA+AGG 0.396929 3.4:-92354545 MS.gene80168:CDS
ATGCACCACTGTACTGACTA+TGG 0.398218 3.4:-92354043 MS.gene80168:CDS
CTTTCAATGACCTTAAAATC+AGG 0.399857 3.4:+92352013 None:intergenic
CCTATTGCAGCAGCATCATT+AGG 0.400240 3.4:-92355125 MS.gene80168:CDS
AATCACTGGAAAATAAATTT+GGG 0.401318 3.4:-92358565 MS.gene80168:CDS
ATTAAGCTTACAGATGAAAC+AGG 0.402280 3.4:-92354006 MS.gene80168:CDS
TGCTCTTGTTATAAGAGCAT+TGG 0.407739 3.4:-92352068 MS.gene80168:CDS
CCTAATGATGCTGCTGCAAT+AGG 0.410003 3.4:+92355125 None:intergenic
TTCAATGCTATATACCGGTT+TGG 0.412458 3.4:-92358512 MS.gene80168:CDS
AGAAGGGACAGCTAAAGTTC+TGG 0.413956 3.4:-92352038 MS.gene80168:CDS
ATGAATAGAAGCACCAAATT+GGG 0.419093 3.4:+92355175 None:intergenic
AGAGCATTGGGATCACTAGA+AGG 0.419842 3.4:-92352055 MS.gene80168:CDS
CCAGAGGATATTGCGCTTTG+AGG 0.420718 3.4:-92351188 MS.gene80168:intron
TGAACATTTCAGGAGCGTAC+TGG 0.429436 3.4:-92350613 MS.gene80168:intron
AACCTTGTTGCGACAAATGA+TGG 0.435068 3.4:-92353641 MS.gene80168:CDS
CTTTGGGATTTATTCCTGAA+GGG 0.436339 3.4:-92353027 MS.gene80168:CDS
TTTCCATGCTGATCCTCATC+CGG 0.441250 3.4:-92353666 MS.gene80168:CDS
TTTGTCGCAACAAGGTTTCC+CGG 0.442301 3.4:+92353647 None:intergenic
TCTAGTAGCAGTTAATGAAA+TGG 0.449408 3.4:-92354806 MS.gene80168:intron
GCTCTTGTTATAAGAGCATT+GGG 0.455514 3.4:-92352067 MS.gene80168:CDS
CTGACTATGGAGTGGTTAGA+TGG 0.455767 3.4:-92354030 MS.gene80168:CDS
ATTACTTGCGGGGATGGAAA+TGG 0.456494 3.4:+92359084 None:intergenic
AGTGGACAACAATGCTTCTT+CGG 0.457905 3.4:-92350543 MS.gene80168:CDS
TGATTGATTGTGCATTAAAT+GGG 0.459548 3.4:-92351222 MS.gene80168:CDS
TTATGGTGCAGATATTCAAC+TGG 0.462990 3.4:-92358644 MS.gene80168:intron
TCTTTGGGATTTATTCCTGA+AGG 0.465436 3.4:-92353028 MS.gene80168:CDS
AAAGTTTCAATGCTATATAC+CGG 0.467023 3.4:-92358517 MS.gene80168:CDS
CATTCGTGAGGTGGTGAAGT+TGG 0.471424 3.4:-92350575 MS.gene80168:CDS
TGAAGTTGGCGCCAGGGGAG+TGG 0.472963 3.4:-92350561 MS.gene80168:CDS
GAGGTGGTGAAGTTGGCGCC+AGG 0.478413 3.4:-92350568 MS.gene80168:CDS
CGTGAAACTCTAATACGCTT+GGG 0.479943 3.4:-92356477 MS.gene80168:CDS
TTCCATGCTGATCCTCATCC+GGG 0.481310 3.4:-92353665 MS.gene80168:CDS
TATACTGTTGGTAATATGTC+AGG 0.481567 3.4:+92355403 None:intergenic
TAGAAGATTACTTGCGGGGA+TGG 0.482737 3.4:+92359078 None:intergenic
CTGATTATGCAAGGAGGAGG+AGG 0.483661 3.4:-92358589 MS.gene80168:CDS
GTGGAATCGGTTAGAGCGCC+TGG 0.485520 3.4:-92351891 MS.gene80168:intron
ATGGATCGATAAGGTGGAAT+CGG 0.486052 3.4:-92351904 MS.gene80168:CDS
GTAAAGCTTCTTTAAACAGA+AGG 0.487728 3.4:-92353978 MS.gene80168:CDS
TGCAGCAGCATCATTAGGAC+AGG 0.489237 3.4:-92355120 MS.gene80168:CDS
ATAAGTCTTCCAATAACAAA+AGG 0.490053 3.4:+92351983 None:intergenic
TCGTGAAACTCTAATACGCT+TGG 0.494159 3.4:-92356478 MS.gene80168:CDS
AAGGAGGAGGAGGGAATCAC+TGG 0.494567 3.4:-92358579 MS.gene80168:CDS
CATACATGATATCATATAGT+TGG 0.498022 3.4:+92352119 None:intergenic
CCAATTTAAACGGTTTGCGA+AGG 0.498384 3.4:-92354842 MS.gene80168:CDS
CTTATAACAAGAGCATAGTC+TGG 0.499339 3.4:+92352076 None:intergenic
ATTATTCATACTATCAGAGA+AGG 0.506198 3.4:-92351314 MS.gene80168:CDS
TCAAATGATTTCCAAACAGA+AGG 0.508253 3.4:+92351373 None:intergenic
AGCATTGTTGTCCACTCCCC+TGG 0.508780 3.4:+92350550 None:intergenic
CCGTTGACTCCTATCAGAAA+AGG 0.508783 3.4:+92352967 None:intergenic
TTTAGGAAAATGTATGCCAC+TGG 0.510552 3.4:-92358820 MS.gene80168:CDS
AAACTTGCCTTAATGTAGAA+AGG 0.510831 3.4:+92356453 None:intergenic
GAACATTTCAGGAGCGTACT+GGG 0.511774 3.4:-92350612 MS.gene80168:intron
TTTGGGATTTATTCCTGAAG+GGG 0.519258 3.4:-92353026 MS.gene80168:CDS
TTTGGCTTTGTATAGGGCTG+CGG 0.520273 3.4:-92358483 MS.gene80168:CDS
CAGGAATAAATCCCAAAGAA+AGG 0.520817 3.4:+92353032 None:intergenic
CTGGAAATCTTGAGACTCAC+TGG 0.524828 3.4:+92352943 None:intergenic
TTGATGCAACAGCCAGGAAG+GGG 0.526224 3.4:+92358770 None:intergenic
TAATCGCGACTCTCTGAGCT+TGG 0.534400 3.4:-92353065 MS.gene80168:CDS
GCAACAAGGTTTCCCGGATG+AGG 0.535243 3.4:+92353653 None:intergenic
AGGGATTATACTGCTCTTTG+AGG 0.537260 3.4:-92353709 MS.gene80168:CDS
ATTCTTCTCATATCAGGACT+AGG 0.539845 3.4:+92351953 None:intergenic
GGTGGTGAAGTTGGCGCCAG+GGG 0.542731 3.4:-92350566 MS.gene80168:CDS
TATGGAACAGCAAAGCATCA+AGG 0.549400 3.4:+92354875 None:intergenic
TAAAGCTTCTTTAAACAGAA+GGG 0.550455 3.4:-92353977 MS.gene80168:CDS
CACATTAATACAGCTCGGAC+AGG 0.550830 3.4:-92355440 MS.gene80168:intron
CTTCTACTATATCCCGAAGA+AGG 0.551311 3.4:+92351272 None:intergenic
GACAACAATGCTTCTTCGGA+TGG 0.552834 3.4:-92350539 MS.gene80168:CDS
AGCTCTTGACAATATACTGT+TGG 0.553547 3.4:+92355391 None:intergenic
GCTGTAAAAGTTCAGAGGCC+AGG 0.555137 3.4:-92354916 MS.gene80168:CDS
TTCGTAATAATGGATCGATA+AGG 0.555778 3.4:-92351913 MS.gene80168:CDS
TTTGCTGTTCCATATGATTG+GGG 0.556819 3.4:-92354866 MS.gene80168:CDS
CCTCAAAGCGCAATATCCTC+TGG 0.559874 3.4:+92351188 None:intergenic
TTGAGGCAAATGCTCGAGGA+TGG 0.561214 3.4:-92353692 MS.gene80168:CDS
AGGTGGTGAAGTTGGCGCCA+GGG 0.561779 3.4:-92350567 MS.gene80168:CDS
CTCCTTGCATAATCAGGAGA+CGG 0.566045 3.4:+92358596 None:intergenic
CTCTTTGAGGCAAATGCTCG+AGG 0.566356 3.4:-92353696 MS.gene80168:CDS
GAATAATAAAAGATCTTCTG+TGG 0.567329 3.4:+92351330 None:intergenic
AAGAGCATAGTCTGGTGGGA+GGG 0.569585 3.4:+92352084 None:intergenic
AAATCGATTATGTCCTAGAA+GGG 0.569775 3.4:-92354544 MS.gene80168:CDS
TGCGGGGATGGAAATGGCGC+CGG 0.571024 3.4:+92359090 None:intergenic
CAAATGATTTCCAAACAGAA+GGG 0.573018 3.4:+92351374 None:intergenic
GTCAATGAAAGTGACATGCC+TGG 0.574169 3.4:+92354898 None:intergenic
ACAGATTGCAGGTAGCCGCT+TGG 0.574204 3.4:-92350450 MS.gene80168:CDS
GTAATAATGGATCGATAAGG+TGG 0.575385 3.4:-92351910 MS.gene80168:CDS
CAGAAGGGAACTCATTGACC+AGG 0.577015 3.4:-92353962 MS.gene80168:intron
ACTGGTTTCACCAACGTGCA+TGG 0.577158 3.4:-92358626 MS.gene80168:CDS
ATCCATCATTTGTCGCAACA+AGG 0.577514 3.4:+92353639 None:intergenic
ATGGAACAGCAAAGCATCAA+GGG 0.579318 3.4:+92354876 None:intergenic
CTCCGTCTCCTGATTATGCA+AGG 0.580889 3.4:-92358598 MS.gene80168:CDS
CTCCTGATTATGCAAGGAGG+AGG 0.582551 3.4:-92358592 MS.gene80168:CDS
TTTGATGCAACAGCCAGGAA+GGG 0.583586 3.4:+92358769 None:intergenic
ACTGGAATATCTGAGGAGGT+TGG 0.586654 3.4:-92358802 MS.gene80168:CDS
TAACAAGAGCATAGTCTGGT+GGG 0.586859 3.4:+92352080 None:intergenic
GTGACGATAAAGAGCGGCGA+AGG 0.590470 3.4:+92359114 None:intergenic
TTATTCATACTATCAGAGAA+GGG 0.597112 3.4:-92351313 MS.gene80168:CDS
AGTCCAATACGATAATGCCT+AGG 0.612005 3.4:+92353578 None:intergenic
GAGCATTGGGATCACTAGAA+GGG 0.612395 3.4:-92352054 MS.gene80168:CDS
TGATTATGCAAGGAGGAGGA+GGG 0.614228 3.4:-92358588 MS.gene80168:CDS
TGATGCAACAGCCAGGAAGG+GGG 0.617472 3.4:+92358771 None:intergenic
GATGCAACAGCCAGGAAGGG+GGG 0.624115 3.4:+92358772 None:intergenic
TAAGTAGAAGATTACTTGCG+GGG 0.624383 3.4:+92359074 None:intergenic
CGTTTCACACATCAATGAGG+AGG 0.624767 3.4:-92359141 None:intergenic
GTAGAGAGAAGCAAATCGCT+CGG 0.625793 3.4:+92354514 None:intergenic
TTGCTGTTCCATATGATTGG+GGG 0.633281 3.4:-92354865 MS.gene80168:CDS
ATAACAAGAGCATAGTCTGG+TGG 0.635486 3.4:+92352079 None:intergenic
GTATGCCACTGGAATATCTG+AGG 0.636314 3.4:-92358809 MS.gene80168:CDS
CAAGAGCATAGTCTGGTGGG+AGG 0.648205 3.4:+92352083 None:intergenic
TTCCCGGATGAGGATCAGCA+TGG 0.651555 3.4:+92353663 None:intergenic
GCAACATCAGTTGAAAATGG+AGG 0.657022 3.4:+92355215 None:intergenic
ATGGGAATCGTCAAGACCAG+AGG 0.657066 3.4:-92351204 MS.gene80168:CDS
TTGTAGCTGTAAAAGTTCAG+AGG 0.658581 3.4:-92354921 MS.gene80168:CDS
CGGAGTTTCACCATGCACGT+TGG 0.670314 3.4:+92358616 None:intergenic
ATGTCTTCAGGCTAACAATG+TGG 0.676678 3.4:-92358448 MS.gene80168:CDS
GCCGCTCTTTATCGTCACAC+CGG 0.677538 3.4:-92359109 MS.gene80168:CDS
GCCGGTGTGACGATAAAGAG+CGG 0.687153 3.4:+92359108 None:intergenic
AACCTCCTCAGATATTCCAG+TGG 0.700820 3.4:+92358804 None:intergenic
TATCGACAAATAGAGCCAAG+CGG 0.721754 3.4:+92350435 None:intergenic
CGTCTCCTGATTATGCAAGG+AGG 0.725178 3.4:-92358595 MS.gene80168:CDS
TGCCACTGGAATATCTGAGG+AGG 0.727240 3.4:-92358806 MS.gene80168:CDS
CCACTGTACTGACTATGGAG+TGG 0.738546 3.4:-92354038 MS.gene80168:CDS
CCACTCCATAGTCAGTACAG+TGG 0.754497 3.4:+92354038 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.4 gene 92350411 92359149 92350411 ID=MS.gene80168
chr3.4 mRNA 92350411 92359149 92350411 ID=MS.gene80168.t1;Parent=MS.gene80168
chr3.4 exon 92359089 92359149 92359089 ID=MS.gene80168.t1.exon1;Parent=MS.gene80168.t1
chr3.4 CDS 92359089 92359149 92359089 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92358765 92358873 92358765 ID=MS.gene80168.t1.exon2;Parent=MS.gene80168.t1
chr3.4 CDS 92358765 92358873 92358765 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92358409 92358655 92358409 ID=MS.gene80168.t1.exon3;Parent=MS.gene80168.t1
chr3.4 CDS 92358409 92358655 92358409 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92356461 92356502 92356461 ID=MS.gene80168.t1.exon4;Parent=MS.gene80168.t1
chr3.4 CDS 92356461 92356502 92356461 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92355378 92355449 92355378 ID=MS.gene80168.t1.exon5;Parent=MS.gene80168.t1
chr3.4 CDS 92355378 92355449 92355378 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92355111 92355246 92355111 ID=MS.gene80168.t1.exon6;Parent=MS.gene80168.t1
chr3.4 CDS 92355111 92355246 92355111 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92354807 92354964 92354807 ID=MS.gene80168.t1.exon7;Parent=MS.gene80168.t1
chr3.4 CDS 92354807 92354964 92354807 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92354501 92354585 92354501 ID=MS.gene80168.t1.exon8;Parent=MS.gene80168.t1
chr3.4 CDS 92354501 92354585 92354501 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92353963 92354132 92353963 ID=MS.gene80168.t1.exon9;Parent=MS.gene80168.t1
chr3.4 CDS 92353963 92354132 92353963 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92353568 92353729 92353568 ID=MS.gene80168.t1.exon10;Parent=MS.gene80168.t1
chr3.4 CDS 92353568 92353729 92353568 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92352943 92353101 92352943 ID=MS.gene80168.t1.exon11;Parent=MS.gene80168.t1
chr3.4 CDS 92352943 92353101 92352943 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92351892 92352152 92351892 ID=MS.gene80168.t1.exon12;Parent=MS.gene80168.t1
chr3.4 CDS 92351892 92352152 92351892 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92351189 92351461 92351189 ID=MS.gene80168.t1.exon13;Parent=MS.gene80168.t1
chr3.4 CDS 92351189 92351461 92351189 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
chr3.4 exon 92350411 92350623 92350411 ID=MS.gene80168.t1.exon14;Parent=MS.gene80168.t1
chr3.4 CDS 92350411 92350623 92350411 ID=cds.MS.gene80168.t1;Parent=MS.gene80168.t1
Gene Sequence

>MS.gene80168

ATGAGGAGGAATGCCTTCGCCGCTCTTTATCGTCACACCGGCGCCATTTCCATCCCCGCAAGTAATCTTCTACTTAACACTTTCCGCAAATTCATCGCTTCTAAATACTTTAATTTTTCCTTATTTAAATGCAATTATACAATTTCCGTTCTATAGCACCGGTTAGTTTTGATTTTGTTTTACTTGCTGAAATTATTGAATTTCAATGTTAGTTAGGTTAATTTTGATATTGTTGTTGTTGTATCATTTTGAGAGTGTGAGTGTTTTTTCTTGTAGAATTACGATATATAAGTGCAACTGAGATTACTTTAGGAAAATGTATGCCACTGGAATATCTGAGGAGGTTGGATTCCTGCCCCCCTTCCTGGCTGTTGCATCAAAATTCGTGAGTCGAATTGATTCCTTATACATATGATTTGATTAATATAAAATAATTTTGTTTAGGTTATGTTTTGTGATCTTCAAATTTTTGTTTGTGGGGGATTATGGTGCAGATATTCAACTGGTTTCACCAACGTGCATGGTGAAACTCCGTCTCCTGATTATGCAAGGAGGAGGAGGGAATCACTGGAAAATAAATTTGGGATTACTCTTGGAACTTATAGCTCTAAAAGTTTCAATGCTATATACCGGTTTGGTCCCTTTTTGGCTTTGTATAGGGCTGCGGTTATTTCATTTCATGTCTTCAGGCTAACAATGTGGCAGTTGTTTGTTGAAGACATACAAAAACGAGCAGTTAAGGTAATTGATTTTCTGTTACCAATACTTTCTATACAATTAAGCATATGCACTTAGAAAACAAACACACATAATTTTTGGTTTGGGATAATAGATCAATATGTTCAATTTGTTATGCATGAAGAATTAGCCACGGTTATAAAAGGCAACAACAAACCTTGCTTCTGCCATGATAAGGTCCTGGAAAGGGTTGGGTCCCATTGTAGGTATATTGTTGGCACAACCTTATTTTGTTTTTAGTAGAGGCTGACTTCACAACTCCATAGTTGCATATGAATTGATAACGGTGTCTATCTTGGACAATAACTCCTCCTCTGTTGCATTACATAGATGTCGTAATGTTATTTTTGGTTCATTTAAATCAGCTTGTACCGCTCTAGTACAATTTCAAGTGAGCAAAATTCATGATGTCGATATTATAGTCATAAATCCATACTTCCAATTCCGCTTTGTGGGAAGCGAAGCTAGTCAAGCGACTTTGCTTGTTCTTCTTGCTGTCAGTCTCGAGGATACAAGTATTTTTTTTCACAGTTATGTCGACAATAGTTTCTGTTGCTCTGAGATAAAAGCCATGTTACCAAATTGATTTTATGTTATCTCCTTCTCTGTTGACATTCAAGAACTTGTCTGCGTGCTTATTATTTTATCACCCTGTTTTTATTTGGTCAATTAATGTTTGATAGTTTTTCAGTTTAACACTACTGCTATTTTATAAAACCACGTGACCCTTTTGTTCCTCTTATACCCTAATTGGAACTCGTTAGAATATTCATCCTGTCATGCTTGTGTTCACATGATCATAAGCTTCTTTTTGACTTACGCTTTTTGTTGCCTTGGTTAATTAAGCTCGGTTTCGTGTGGGTGTTGCGTGCAGCTTGTTGCACAAGATACTTTCTCTTAATTTCTGTTAAAACTCAGTTGCTAGTTAGTAGTTAGATTTTTTTGTCACAATCATTTATTGCAAAATACCACCTTCACTCGTATCCGAACCTAGAGACTCAATTTCATTGTCATCACATCCAGAAATATAGTCGAGTTTATACTCAAATTTTCTCTGAAGTTTTCATTATACATTTTCTTAAATTTTCTTGTATTTTCTCAATGACTCCAAATGAAATATTGTTTTATTAACTGGTAATGATAGTCATGACTTCTCCTTGAAATCCACTCTCTTTCCTGGATATCACACTGTGTAGCTTCTGCTCTGACAAATGTCTCATCAAGATTCTGTGGAACTAGTTGAGAAAAATTATCTCCACTGTAAGCAACAAGTAGAAGGTGTTATTCGAAGTCACAAGTTGTGCAGTGTTTTGTGGTTAATCCATCGTTACCACCACGGTTCTTCAAAGAGTAAAATTAAGATGAAGTCATTGTTAATCCTCAGCACTCAAGTTTGGATGAGCAAGATTCACTACTTGCTTCCTGGTTGCTCCCTTCAATTTCATATATTTTTCTGCCTTGCTTCCTTGTATGTGTGCAGCGCACTTTGCACTTCTGGCAGTTTTGGGAGAAAATCCACAACGTTTTCCACACTTACACCTGAGAAACCCAGCGTGAACTTTTCGAGTTAAGTAGTGTAGAGAAGGGAAATAAATTTATTTAAGAATACGTAGCTCAAATAGTGAAGACTATAGATTTTAATTGTGTAATTTTTCAAATTAAATTACAACCATGTGTCTGCTTTATATTGATTGGTACGAGGTTGTTGGCAATGTCACTTTGTCTCATAATGTGCCCTCTTCCATTATGTGTCAACCATGTATTTAAGCACTACAAGATTTATCAAACCACATACATATTTCTTCCACCGACGTTTCTTCCAACAATAGAGTGCATATTCATATCTTTTAATACTTATAAGTGAAAAACTGACAGGAATGAACAATGACGTGAATACAATGTTTTGCAGTTTCGTGAAACTCTAATACGCTTGGGTCCTTTCTACATTAAGGCAAGTTTCTTTCAGTGGTTATTTCCTGTTGGTTTCTGGTTTTATCATGTCTTTTTCCTTTATTCTTTGCCTTATTCTTTTTATACCACAATGTTCCTGCTGTAGTTTGGCATATGCGTTTTTCTTTAACATGACTCTTTATCATACAAACTTATTATTACTCTAAAGTAAGTTTTTGTCTTGTTCCTAATATAAGATAAATTGACTGTTTCAAAGGCTTTTCATAACGTTATAGATGAAAATGTTTATTTTTATCTGTTTTATTATAAAATTCATCATCTACCTTTTGTTCTTGCTGTAGTTTGGCAAATGCATTTTTCATTAACATGACTCTTTATAATACAAACTTATTATTACTCTAAAGTAAGTTTTTGTCTTGTTCGTAATATAAAATAAATTGACCGTTTCAAAGGCTTTTCATAAAGTTATAGATGAAAATGTTTATTTTTATCTGTTTTATTTTGAAATTCATCACCTACCTTTATCTATTTTTACAGTCACTCATAGAAATCAATAATCATGTTTCCAGTTCTTCAACTCTAACTATAGTTACCCCTTTTATTTTATACTCCCTCCGTCCCATTTTAACTAAGCCTTTTGTTCATTTCACACATATTAAGAAAAAATGTATAGGTGAAAGAGAGAAAAAAATAGTTTTGAGTGTCTTGTCAAGTATTGGTGCATTCTTTCTTATCATAAATGCAAAGTGAAAGTAGTATTAATTAGAGTTATAATTGGAAAAAGTAATTATTATTGTATTGAAAAGTGAAATGGGTCAATTTTTTTGGGACAATATTTTTTTTGCAAATGACTCAGTTATTATGGGACGGAGGGAGTATTATTTTTTTGAGGTTTTGTTTTTTGTTTTTTTTCTTTTTTGGAATCAATTGAATGTGGGTTTCTCATATAATCTTCACAACATTATATATATACCATGTGGAACAAGTGTACTTGTTATATCAAAATTTTCAATATGTTATTTTATTTGACGTGGTCTGCACATTAATACAGCTCGGACAGGCATTGAGCACTAGACCTGACATATTACCAACAGTATATTGTCAAGAGCTTGCTAAATTACAGGTACAATGACCTCTTCCATTTTACTTTAACACATACAATCAAATATGGTAGATGCATGTATTGACCATTGTCATGCTCCTGGTTTTGTTATCTGGTATTGATGAAAACTTATAAATTTTTATTCATGCTAGGATCAAATACCTCCATTTTCAACTGATGTTGCAATCAGATGTATCGAAACCCAATTTGGTGCTTCTATTCATGAACTTTTTCGGGACATTAGCTCAGCTCCTATTGCAGCAGCATCATTAGGACAGGTTTATAAAGGTTTGTTACCAGCAATAATAAACTAGAATTTTATTCTAATTTGCATATTTGTTTGGCTTCTTCTTCTTAAATTTGGAACTTTAGAGTACTATAGACACATTTGAGGAAGATTGAAGTGTTTACTTTTGTTGCTTCAAGTGTTACAGCTCATCTGCATTCTGGAGAACTTGTAGCTGTAAAAGTTCAGAGGCCAGGCATGTCACTTTCATTGACCCTTGATGCTTTGCTGTTCCATATGATTGGGGGCCAATTTAAACGGTTTGCGAAGGCTCGCAAAGATCTTCTAGTAGCAGTTAATGAAATGGTGAGTTGCAAATCTATTGCCTTGGAGCACACAAATCTATTGTCGGCATTGTATATGACCCATTTTTCACCTAATATTGACAGTCTAATATCTCTGAAACCCACTTCAAACAATAAATTATTTTCGCATGTGTGTGAGCATGATCGTTACACCAGCTGACTGCTGTGGAGACATTTATATTTTCAGTTTACATTACAATTACTTCATATATTATTCAACAGGTCAGACACATGTTTGATGAAATCGATTATGTCCTAGAAGGGAAAAATGCCGAGCGATTTGCTTCTCTCTACTGTTCTTCTTCAAGTAAGTTCAACATCTGGCAAAAATTCCATTTACTGTTTTCTTTTATTGTACCTTTGGCATGTGCCTAGTTCAAGTGTTCAAAGCATATGTTGTAATCCCAAATTCAAAATTTAGATAATGCTTCACCAAATGTTAATTGAAGCATTTCTCCTAGAATTTTTTAATATTAGCTTTGGAGCAATTTACACATAAAAATCTAGCTTGCTGCTATTCAGAACTGATGATTGTTCCTAAAATATGAGAGGGCAATGTGCATTTCCAATGTGCTGTACATTTTTGTCTCTTATATGATGTATGGTTCTTTGGCATGCAATTTAGATTCGTGATTCTTTTGGATAGATGCTGATGATCAGGGCGACAAAATGCAGGCGGAGGTAATATAAAAAACAATAAAACAAAGTCAGTCAAAGCTCCCAAAATATATTGGGACTATACATGCACCACTGTACTGACTATGGAGTGGTTAGATGGAATTAAGCTTACAGATGAAACAGGTTTGAGTAAAGCTTCTTTAAACAGAAGGGAACTCATTGACCAGGTACGAGCCACATAAGTTTTCTTGGTCACATGCTTATAACAAGTTTACATGCATGATATCTCTTTCATGCCTTTGCTTGTTCGACTGTGTGTTTAGTTACTTAAATTAGTATGCTTACATGTAGTTATGAATAGCATTAAATGCAAGCATACATTTTCTTTTGGCAATATATTAACTGCATATGTTTACTTAATACCAATTGACGTCCTTATGTCTTTCTCATGACTTCGTAGGGATTATACTGCTCTTTGAGGCAAATGCTCGAGGATGGTTATTTCCATGCTGATCCTCATCCGGGAAACCTTGTTGCGACAAATGATGGATCACTTGCATATTTTGACTTTGGAATGATGGGGGATATTCCTAGGCATTATCGTATTGGACTTATTCAAATTGTGAGATGTTTGAACATTGCTCATTTTAATGGATGTAAAACTAATTAGTTTAAGTTAATTTCCACTACATTTGATGACAATTTCTTAAATGGAACACAATGTTTGAAAAGATCAATGTGAATTAAAGATGTTAGACATTTCAACATTTGGCAAGATAGTTGTTCCTTTCTCCTCGTAAAATGTATCATACTTATATCTATGAATTTAAAATTTCATGTGGGTGATTTATGTCAATGTAGTGAATGGTCTTCCTATTTGTGATCAATGGATTTGTTATATGTTGACTACTTCGTGAGTTATTTATCATTCATAAATAACTTTTTTATGATCTCTCTGAGAGGGTTTTTGTGCCTAACTTCTGAGCCATGTTTTATGAATTAAAAGCACTCAAATAGCTGTTGCATAATTGAGATACCCAATTTTCCCTAATTGTCTGTGACTAGTAATGAGTTTATCTCTCTTTCAGATTGTGCACTTTGTTAATCGCGACTCTCTGAGCTTGGCAAATGACTTCCTTTCTTTGGGATTTATTCCTGAAGGGGTTGATATACATTTAGTTTCTAATGCACTGCAAGCATCCTTTTCTGATAGGAGTCAACGGACCAGTGAGTCTCAAGATTTCCAGGTTTGTTTGTCCTTTATCCCGCATCTAAGGACCAACTGTCTGCTGGGTAATAGTTGTAACTGGTGTTATATTTTGGTCATCAACCATCATATCACAAAGCAGAGAATTCATAGCATTTCTCATATCATATGTTAATTGAGACGCTTGGTAGGAACTCCATTAGGAAGGATCGGCTGTGCATAATTTATCCTTCTGTTTTGTGATTATCATTAGATATATGAATGCTTGAATTTCCAAGGATAAATTCTTTGATGCAGTCCTGCTTTGGTATTAAGTATGTAAGTAGTCTCTTAGCCTCTTGTTGGAGGTCGACTGATGGGTCTCTGTTTCCAGTTGGCCTCAAATATGTAGAGAGACTGGTGGGCGATTCCAGTTGCCTTCAAATACGTAGATACTAGTGAGCTATTTTATGAGGGCTTATTCTTCTATGTCATTGTACTTGGTTTTCTCTTAACTTGAAAAAATTATCAATTCATGTGTACTTACCATGAACATACACACAATGTACACACAACAATTAGTGTTTGTCATTCAATTTTAGGCTTTTAATAGTTCAACAACTCACCAGCTGCCTGGTGACATCTATATAACAGTGCTGTAATATTTGCCTTGCTTTATTACTTCTCTGTGCTGAGCTTGAAAGCGTCAAAATTATTTGCTAAGATAATATTTCATTGATCCATTCCTCATAATGTCTTTAACATTAGCCGTTTGTTTTTATATCTATTTAAAGCACAATTTCAGGGTATCATGGCACTTTTTTAAAGTTCATTTTTTCTTTGAATTTCAGGGAGTCATGAACCAACTATATGATATCATGTATGAGTTTAACTTCTCCCTCCCACCAGACTATGCTCTTGTTATAAGAGCATTGGGATCACTAGAAGGGACAGCTAAAGTTCTGGATCCTGATTTTAAGGTCATTGAAAGTGCATATCCTTTTGTTATTGGAAGACTTATAGCAGATCCTAGTCCTGATATGAGAAGAATTTTGAGGGAACTTGTCATTCGTAATAATGGATCGATAAGGTGGAATCGGTTAGAGCGCCTGGTACGATATAAGTTTTTCTACCATGCTTCACATGTAATTATTACGTGGAATGTTGACTCCAATATTTTTTGTAAGCTCATCAACTTAAAACTGAAATTCATACAGCTGAAGTAAAACTACTTGAGTTGAGCTGTATGTGTCATAACTCCCCAAGTAAAAGGAATTGTTATTTGACATTTGTGTTTCATATATAACCACACACACGCACACACCTATACAAGCACATATACTTTTATGATTTATGATCACAGATGTATCATAACTTCTTTTTAGTTGTGCTTGCTTATAAGAGTTGTATAATCACCTCTAATTGTGTTGCATTGTAAATGCAAATCCCATTTCTTTCTGCACTAAAATTTGAATATTCTTATGAACAAAATTATTATACAACTTTGGACTAAATATAATATGAATGCCATTCTTGTTTCAGGTGGCAGCAATATCTGAACAAGCTTCAGAGCTAACCGAAGACCCTAATCCTGAAAAATTCTCAAGCCCTTCTGTTTGGAAATCATTTGATATGCATGCTGTCGTTGATTCCACAGAAGATCTTTTATTATTCATACTATCAGAGAAGGGTCAGAGAGTGCGTGTTTTCCTTCTTCGGGATATAGTAGAAGCAGCTGATGTGTTTCTGCAAGATGAAGTGATTGATTGTGCATTAAATGGGAATCGTCAAGACCAGAGGATATTGCGCTTTGAGGTATTGTCTTTAGTTAAAAAAAATTCATGCGTGTGTGTCCAGGGCAACACGAAGTTTCTTATGGCTCCCTGTCATGTACATAGGTTGTGCATTAAATGGCAATGTGGGGAGAAGTGCACAAATCTTAGTGTTTAGAGGGACACAGCGGGGTAGTCTATGATGGGATGGTAGTAATGGGATAGCTGTGGCAGAAGTTGGGTGACGGAAGTGGTAATGGGATGGCAGAGACAATAACATCAGTGGTGGGATAATGGCACATTTTAGATTGTAGTTTTGGAGGAAAGTGTTCCAGTGGCTTACCTGAAGGGATCTTGAAAAGGGTGAGAGCATTAGAGTATCATTAGTTGTGAACTGCTTGTGTGTTGTTCTTATAGTGTTGTCTAAACCCGTAACCCAAATTCCTTCCTGACAATGCTGAAGGATAAGGATTTTTAGTTGGGTTGAGTCAGTTATGTCTGGTAGGATGAGAGTAGGGGGGAGGGAGGGGGTAGGTGATACTCTTAACTACTAAATAATTCTACTCCATTAAATGGAATTGAAATTTTTTCTTTCCTGAACATTTCAGGAGCGTACTGGGAAATCTTTTCATTACATTCGTGAGGTGGTGAAGTTGGCGCCAGGGGAGTGGACAACAATGCTTCTTCGGATGGCAGTGAAGCCTGAAGTTCACAAATTTACTATAGACATTATTTCAGCTTTAGCTTTGCGTTCTAGTCACAGATTGCAGGTAGCCGCTTGGCTCTATTTGTCGATACTTTTACACAAATTATCTGATTAA

Protein sequence

>MS.gene80168.t1

MRRNAFAALYRHTGAISIPAKLRYISATEITLGKCMPLEYLRRLDSCPPSWLLHQNSYSTGFTNVHGETPSPDYARRRRESLENKFGITLGTYSSKSFNAIYRFGPFLALYRAAVISFHVFRLTMWQLFVEDIQKRAVKFRETLIRLGPFYIKLGQALSTRPDILPTVYCQELAKLQDQIPPFSTDVAIRCIETQFGASIHELFRDISSAPIAAASLGQVYKAHLHSGELVAVKVQRPGMSLSLTLDALLFHMIGGQFKRFAKARKDLLVAVNEMVRHMFDEIDYVLEGKNAERFASLYCSSSSGGNIKNNKTKSVKAPKIYWDYTCTTVLTMEWLDGIKLTDETGLSKASLNRRELIDQGLYCSLRQMLEDGYFHADPHPGNLVATNDGSLAYFDFGMMGDIPRHYRIGLIQIIVHFVNRDSLSLANDFLSLGFIPEGVDIHLVSNALQASFSDRSQRTSESQDFQGVMNQLYDIMYEFNFSLPPDYALVIRALGSLEGTAKVLDPDFKVIESAYPFVIGRLIADPSPDMRRILRELVIRNNGSIRWNRLERLVAAISEQASELTEDPNPEKFSSPSVWKSFDMHAVVDSTEDLLLFILSEKGQRVRVFLLRDIVEAADVFLQDEVIDCALNGNRQDQRILRFEERTGKSFHYIREVVKLAPGEWTTMLLRMAVKPEVHKFTIDIISALALRSSHRLQVAAWLYLSILLHKLSD