Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80187.t1 | XP_003603295.2 | 99.2 | 1022 | 8 | 0 | 1 | 1022 | 1 | 1022 | 0.00E+00 | 2017.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80187.t1 | Q9LK40 | 65.3 | 1006 | 310 | 11 | 34 | 1022 | 23 | 1006 | 0.0e+00 | 1315.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80187.t1 | G7J9U6 | 99.2 | 1022 | 8 | 0 | 1 | 1022 | 1 | 1022 | 0.0e+00 | 2017.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene80187 | 0.86402 | 1.64E-64 | -1.69E-46 |
| MS.gene049418 | MS.gene80187 | 0.816454 | 5.48E-52 | -1.69E-46 |
| MS.gene051248 | MS.gene80187 | 0.853051 | 3.09E-61 | -1.69E-46 |
| MS.gene051251 | MS.gene80187 | 0.800961 | 1.13E-48 | -1.69E-46 |
| MS.gene056228 | MS.gene80187 | 0.883689 | 3.63E-71 | -1.69E-46 |
| MS.gene059154 | MS.gene80187 | 0.891969 | 2.44E-74 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80187 | MS.gene24205 | PPI |
| MS.gene80187 | MS.gene42612 | PPI |
| MS.gene80187 | MS.gene27287 | PPI |
| MS.gene028236 | MS.gene80187 | PPI |
| MS.gene80187 | MS.gene023462 | PPI |
| MS.gene80189 | MS.gene80187 | PPI |
| MS.gene80187 | MS.gene42606 | PPI |
| MS.gene32700 | MS.gene80187 | PPI |
| MS.gene80187 | MS.gene32699 | PPI |
| MS.gene35217 | MS.gene80187 | PPI |
| MS.gene08397 | MS.gene80187 | PPI |
| MS.gene80187 | MS.gene08846 | PPI |
| MS.gene80187 | MS.gene27025 | PPI |
| MS.gene014907 | MS.gene80187 | PPI |
| MS.gene80187 | MS.gene09000 | PPI |
| MS.gene80187 | MS.gene42607 | PPI |
| MS.gene80187 | MS.gene09247 | PPI |
| MS.gene80187 | MS.gene32700 | PPI |
| MS.gene80187 | MS.gene90747 | PPI |
| MS.gene023227 | MS.gene80187 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80187.t1 | MTR_3g105990 | 99.217 | 1022 | 8 | 0 | 1 | 1022 | 1 | 1022 | 0.0 | 2112 |
| MS.gene80187.t1 | MTR_0189s0050 | 93.822 | 518 | 29 | 2 | 2 | 519 | 3 | 517 | 0.0 | 1014 |
| MS.gene80187.t1 | MTR_1g023500 | 33.140 | 1035 | 582 | 29 | 53 | 1022 | 36 | 1025 | 7.31e-163 | 511 |
| MS.gene80187.t1 | MTR_8g023445 | 28.906 | 1024 | 596 | 32 | 53 | 1020 | 894 | 1841 | 2.46e-98 | 342 |
| MS.gene80187.t1 | MTR_4g124030 | 25.000 | 1048 | 599 | 42 | 59 | 1011 | 31 | 986 | 3.24e-56 | 213 |
| MS.gene80187.t1 | MTR_4g051130 | 25.758 | 264 | 160 | 6 | 774 | 1008 | 618 | 874 | 1.66e-16 | 85.5 |
| MS.gene80187.t1 | MTR_0002s0510 | 24.382 | 283 | 182 | 5 | 738 | 993 | 653 | 930 | 2.07e-16 | 85.5 |
| MS.gene80187.t1 | MTR_1g022135 | 24.211 | 285 | 144 | 12 | 133 | 402 | 11 | 238 | 5.71e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80187.t1 | AT3G23780 | 64.815 | 1026 | 319 | 13 | 17 | 1022 | 3 | 1006 | 0.0 | 1337 |
| MS.gene80187.t1 | AT3G23780 | 64.815 | 1026 | 319 | 13 | 17 | 1022 | 3 | 1006 | 0.0 | 1337 |
| MS.gene80187.t1 | AT3G18090 | 65.635 | 905 | 275 | 9 | 136 | 1022 | 3 | 889 | 0.0 | 1213 |
| MS.gene80187.t1 | AT3G18090 | 65.635 | 905 | 275 | 9 | 136 | 1022 | 3 | 889 | 0.0 | 1212 |
| MS.gene80187.t1 | AT3G18090 | 65.635 | 905 | 275 | 9 | 136 | 1022 | 3 | 889 | 0.0 | 1211 |
| MS.gene80187.t1 | AT4G21710 | 33.237 | 1035 | 581 | 29 | 53 | 1022 | 33 | 1022 | 1.12e-159 | 503 |
| MS.gene80187.t1 | AT5G45140 | 29.816 | 1033 | 589 | 35 | 53 | 1020 | 39 | 1000 | 2.53e-105 | 356 |
| MS.gene80187.t1 | AT5G45140 | 29.816 | 1033 | 589 | 35 | 53 | 1020 | 39 | 1000 | 2.53e-105 | 356 |
| MS.gene80187.t1 | AT5G45140 | 29.462 | 818 | 468 | 28 | 53 | 827 | 39 | 790 | 5.30e-78 | 273 |
| MS.gene80187.t1 | AT1G29940 | 23.682 | 1043 | 618 | 35 | 53 | 1008 | 16 | 967 | 4.31e-51 | 196 |
| MS.gene80187.t1 | ATCG00190 | 25.077 | 323 | 202 | 9 | 716 | 1008 | 577 | 889 | 5.76e-15 | 80.5 |
Find 243 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAAGACATTGTTAATTT+TGG | 0.067293 | 3.1:-83876775 | MS.gene80187:CDS |
| AAAGCATCGACTCTTATATT+TGG | 0.162091 | 3.1:+83877081 | None:intergenic |
| CTTGATATGTCATTCTTATT+AGG | 0.167440 | 3.1:-83877210 | MS.gene80187:CDS |
| CGGAGGCTACTTTCTGATTA+AGG | 0.193770 | 3.1:-83880722 | MS.gene80187:CDS |
| AAATAGGATGGTTGTTAAAT+TGG | 0.238146 | 3.1:-83880028 | MS.gene80187:CDS |
| CCAAAGTCTGAATTCTATAA+TGG | 0.247666 | 3.1:-83876961 | MS.gene80187:CDS |
| TTGAAGTCCTCTTCTTCTTC+AGG | 0.252661 | 3.1:+83877303 | None:intergenic |
| CCTCTGCAACCTGGCATGTC+TGG | 0.253652 | 3.1:+83881234 | None:intergenic |
| AGTAATCTGCTCAAGATTAA+AGG | 0.253696 | 3.1:-83877390 | MS.gene80187:CDS |
| GCTCTGCAGAGAGACCTTTA+TGG | 0.256867 | 3.1:-83879493 | MS.gene80187:CDS |
| CGTTATGCTACGGTTAAGTT+TGG | 0.257432 | 3.1:-83881325 | MS.gene80187:CDS |
| TTGGAGACCATTTGTAATAA+TGG | 0.265166 | 3.1:+83879429 | None:intergenic |
| GGAAAGATACAGAGTAAAAT+TGG | 0.269746 | 3.1:-83876754 | MS.gene80187:CDS |
| AAAAGGATGGAAAGGATTTC+TGG | 0.273074 | 3.1:-83879370 | MS.gene80187:CDS |
| TACATTGATAAAGATATTAA+AGG | 0.273662 | 3.1:-83880847 | MS.gene80187:CDS |
| GCATGGACAGAAGGGTGTTT+TGG | 0.274857 | 3.1:-83876236 | MS.gene80187:CDS |
| TGATGATTCTACAACTGTTC+TGG | 0.282708 | 3.1:-83878428 | MS.gene80187:CDS |
| TACAATCAATTCATCAATTC+TGG | 0.294934 | 3.1:-83881433 | MS.gene80187:CDS |
| CAAAGCTGAAATTGAGAATA+AGG | 0.300709 | 3.1:-83876821 | MS.gene80187:CDS |
| TCTGGCGTGGTTGCAACTCT+TGG | 0.301923 | 3.1:-83879352 | MS.gene80187:CDS |
| TTCTTAGAGGAACGTGTAAA+AGG | 0.305968 | 3.1:-83879766 | MS.gene80187:CDS |
| GGGTTTCAAATATTCCATAC+TGG | 0.306856 | 3.1:-83880080 | MS.gene80187:CDS |
| CGCTTGAGCGACCTAAGTTT+TGG | 0.310792 | 3.1:-83881294 | MS.gene80187:CDS |
| CTCCAGTAGAAAACGCTCTT+TGG | 0.314169 | 3.1:+83879410 | None:intergenic |
| TAGCCTGAGAAGAATGCTTC+TGG | 0.321084 | 3.1:+83877124 | None:intergenic |
| TCATCAGCACCTTTCTTAGA+AGG | 0.322385 | 3.1:+83881355 | None:intergenic |
| ACCGAGTTCGTTGAGGATTT+CGG | 0.334040 | 3.1:+83881540 | None:intergenic |
| TGAGTTGGCTGGTGAGCTGC+TGG | 0.335127 | 3.1:-83879566 | MS.gene80187:CDS |
| TAAATCTTTCCAGTCCCTAT+TGG | 0.337687 | 3.1:-83877352 | MS.gene80187:CDS |
| CTTGGAAAACCTGGATATCT+TGG | 0.343060 | 3.1:-83877000 | MS.gene80187:CDS |
| TGTGCTTTAGCTTTATACTA+TGG | 0.343766 | 3.1:+83876632 | None:intergenic |
| CCAAAATTAACAATGTCTTC+AGG | 0.345264 | 3.1:+83876775 | None:intergenic |
| AAGCATTCTTCTCAGGCTAT+TGG | 0.349703 | 3.1:-83877120 | MS.gene80187:CDS |
| CAGGTTAGGAGCCCAGTTCT+TGG | 0.351963 | 3.1:-83876277 | MS.gene80187:CDS |
| AGTCGCAGATGAAGAGAAAT+AGG | 0.352580 | 3.1:-83880044 | MS.gene80187:CDS |
| CTCCAACCCAGTCCCCATTT+AGG | 0.352720 | 3.1:+83878386 | None:intergenic |
| TAGCTCTGCCACAAATGATA+TGG | 0.355404 | 3.1:+83878351 | None:intergenic |
| CCATTACTGACCAGCTTCAT+AGG | 0.355712 | 3.1:-83876024 | MS.gene80187:CDS |
| ATTGTTGATCTCATCGATTA+TGG | 0.355906 | 3.1:-83879886 | MS.gene80187:CDS |
| TGTGGATTTATAACAATATC+AGG | 0.355965 | 3.1:+83876163 | None:intergenic |
| TTCCAGTCCCTATTGGATAA+TGG | 0.357748 | 3.1:-83877345 | MS.gene80187:CDS |
| AAGCATCGACTCTTATATTT+GGG | 0.358815 | 3.1:+83877082 | None:intergenic |
| ATCGAACAGCTGAGGAAGTA+TGG | 0.360028 | 3.1:+83878471 | None:intergenic |
| GATACGAGGGAAATAACTAT+TGG | 0.360774 | 3.1:-83880820 | MS.gene80187:CDS |
| GATGATGGCTTTCCATTTGT+TGG | 0.362742 | 3.1:-83876712 | MS.gene80187:CDS |
| ATCGGGCGGTGTGCTGATTC+CGG | 0.370475 | 3.1:-83876661 | MS.gene80187:CDS |
| AGATCAGACTTGACCATAAC+AGG | 0.371245 | 3.1:+83880790 | None:intergenic |
| CAACGAACTCGGTGATGATA+TGG | 0.374454 | 3.1:-83881530 | MS.gene80187:CDS |
| CAATCACGCCATTATCCAAT+AGG | 0.374576 | 3.1:+83877337 | None:intergenic |
| TGCAAATTTGCTCCAACAAA+TGG | 0.379930 | 3.1:+83876700 | None:intergenic |
| GAGAACTTATCTCCAAGAAC+TGG | 0.386193 | 3.1:+83876265 | None:intergenic |
| TGTTCAGATCTGAGCATATA+AGG | 0.389042 | 3.1:-83876849 | MS.gene80187:CDS |
| CGAAGTGATAAGTTTAAGAC+TGG | 0.396101 | 3.1:-83880880 | MS.gene80187:CDS |
| GGAGGCTACTTTCTGATTAA+GGG | 0.396161 | 3.1:-83880721 | MS.gene80187:CDS |
| CTGGCGTGGTTGCAACTCTT+GGG | 0.400314 | 3.1:-83879351 | MS.gene80187:CDS |
| TTCAGATTCCATATCATTTG+TGG | 0.401910 | 3.1:-83878359 | MS.gene80187:CDS |
| ACCCTTCTGTCCATGCATAC+TGG | 0.403623 | 3.1:+83876243 | None:intergenic |
| TGGGGTGTTCAGTATTTGTT+TGG | 0.404123 | 3.1:-83877273 | MS.gene80187:CDS |
| ATTGATTGTACGAGTTGATT+TGG | 0.406359 | 3.1:+83881446 | None:intergenic |
| ACATTGATAAAGATATTAAA+GGG | 0.408591 | 3.1:-83880846 | MS.gene80187:CDS |
| TTGAAAGCAACAGCCCAGTA+TGG | 0.411906 | 3.1:+83880066 | None:intergenic |
| TTCGTTGAGGATTTCGGCGT+TGG | 0.412731 | 3.1:+83881546 | None:intergenic |
| TTCCTCAGCTGTTCGATTGT+GGG | 0.413594 | 3.1:-83878465 | MS.gene80187:CDS |
| AGAGGACTTCAAGACTGCTT+GGG | 0.413762 | 3.1:-83877292 | MS.gene80187:CDS |
| CAAAGTCTGAATTCTATAAT+GGG | 0.419058 | 3.1:-83876960 | MS.gene80187:CDS |
| CAACACCAACTACACAGAAA+TGG | 0.421651 | 3.1:-83881599 | MS.gene80187:CDS |
| TGCTGTTGTTTCGCTGAGAC+AGG | 0.424938 | 3.1:-83876551 | MS.gene80187:intron |
| TTTGGGATTTCTGGAGTCTC+AGG | 0.425430 | 3.1:-83876218 | MS.gene80187:CDS |
| TTTCCTTCGCGACAAACTCC+TGG | 0.425956 | 3.1:-83876136 | MS.gene80187:CDS |
| GTTGCAGGCATCCTTCTCAC+TGG | 0.426530 | 3.1:-83878591 | MS.gene80187:intron |
| AAGGATTCTCCGTCCACTCT+TGG | 0.429803 | 3.1:-83877418 | MS.gene80187:CDS |
| CTTCCTCAGCTGTTCGATTG+TGG | 0.430430 | 3.1:-83878466 | MS.gene80187:CDS |
| TCAGGTATATGTTATGAAGA+AGG | 0.434148 | 3.1:-83880905 | MS.gene80187:intron |
| AAATATTTCTGAAGAGACTC+TGG | 0.434667 | 3.1:-83880101 | MS.gene80187:CDS |
| GCATCCTTCTCACTGGGGTA+AGG | 0.434903 | 3.1:-83878584 | MS.gene80187:CDS |
| GAGAAGAATGCTTCTGGGAT+TGG | 0.435150 | 3.1:+83877130 | None:intergenic |
| ACAACTACTAGAGGCTGCTT+TGG | 0.435996 | 3.1:-83876113 | MS.gene80187:CDS |
| GACGCTTCCATTATTACAAA+TGG | 0.436306 | 3.1:-83879436 | MS.gene80187:CDS |
| AATTCAGCCATGGTTTGTAA+TGG | 0.438058 | 3.1:+83879319 | None:intergenic |
| AATGTCCATTTCTGTGTAGT+TGG | 0.438246 | 3.1:+83881594 | None:intergenic |
| GTTCTTCTACTAGCATATAC+TGG | 0.438779 | 3.1:-83879634 | MS.gene80187:CDS |
| CAAGCCGCTTTCGATTCCTT+CGG | 0.440812 | 3.1:-83881406 | MS.gene80187:CDS |
| GGTGACTGATTAAACCGTAT+TGG | 0.443432 | 3.1:+83881467 | None:intergenic |
| CTCTGCAACCTGGCATGTCT+GGG | 0.444306 | 3.1:+83881235 | None:intergenic |
| GAACTTCTCGTTCTCCATAA+AGG | 0.446635 | 3.1:+83879479 | None:intergenic |
| CGAAAGGGGTTATGTTCAAA+AGG | 0.455941 | 3.1:-83876608 | MS.gene80187:CDS |
| TCGGGCGGTGTGCTGATTCC+GGG | 0.456470 | 3.1:-83876660 | MS.gene80187:CDS |
| CAACTACTAGAGGCTGCTTT+GGG | 0.457722 | 3.1:-83876112 | MS.gene80187:CDS |
| GATGATTCTACAACTGTTCT+GGG | 0.458884 | 3.1:-83878427 | MS.gene80187:CDS |
| TATTGGGAGACTGCCTGTTA+TGG | 0.459953 | 3.1:-83880803 | MS.gene80187:CDS |
| AGCCATGGTTTGTAATGGAT+TGG | 0.460916 | 3.1:+83879324 | None:intergenic |
| CTAGAGGCTGCTTTGGGAAA+GGG | 0.461237 | 3.1:-83876106 | MS.gene80187:CDS |
| GTTATGCTACGGTTAAGTTT+GGG | 0.463498 | 3.1:-83881324 | MS.gene80187:CDS |
| TTCAGTACACAGGAAAGGTC+GGG | 0.465796 | 3.1:-83879276 | MS.gene80187:CDS |
| AAGAGGACTTCAAGACTGCT+TGG | 0.469345 | 3.1:-83877293 | MS.gene80187:CDS |
| CAGTATTTGTTTGGCAAAGA+GGG | 0.476056 | 3.1:-83877264 | MS.gene80187:CDS |
| GAGGAATGAGTTGCCTCATC+AGG | 0.478810 | 3.1:-83878314 | MS.gene80187:intron |
| GACACATCCTTTCAAAAGGA+TGG | 0.483147 | 3.1:-83879383 | MS.gene80187:CDS |
| CCATTATAGAATTCAGACTT+TGG | 0.484719 | 3.1:+83876961 | None:intergenic |
| CTTGGACACATCCTTTCAAA+AGG | 0.485028 | 3.1:-83879387 | MS.gene80187:CDS |
| TTACTCTGACCAAGATATCC+AGG | 0.485264 | 3.1:+83876991 | None:intergenic |
| GCAGCCTCTAGTAGTTGTCC+AGG | 0.486041 | 3.1:+83876118 | None:intergenic |
| ATACGAGGGAAATAACTATT+GGG | 0.487034 | 3.1:-83880819 | MS.gene80187:CDS |
| GGTGATCTCACTGTTACGCC+TGG | 0.488355 | 3.1:-83881385 | MS.gene80187:CDS |
| GTCTGAAAGAGTGGTCTTTG+TGG | 0.490054 | 3.1:+83877039 | None:intergenic |
| GTCATGTTCTTCGACCAATA+CGG | 0.490177 | 3.1:-83881481 | MS.gene80187:CDS |
| CACATTTATCGTCTGCCTCA+CGG | 0.490360 | 3.1:+83879821 | None:intergenic |
| ATCCCAGAAGCATTCTTCTC+AGG | 0.490953 | 3.1:-83877127 | MS.gene80187:CDS |
| CGCCATTATCCAATAGGGAC+TGG | 0.492490 | 3.1:+83877343 | None:intergenic |
| TGTTCTTCTTAATTCAGCCA+TGG | 0.493474 | 3.1:+83879309 | None:intergenic |
| TAGGATGGTTGTTAAATTGG+TGG | 0.495089 | 3.1:-83880025 | MS.gene80187:CDS |
| CAAAGTGGTGATATTATCAT+CGG | 0.496605 | 3.1:-83876679 | MS.gene80187:CDS |
| TTGCAGGCATCCTTCTCACT+GGG | 0.496735 | 3.1:-83878590 | MS.gene80187:intron |
| CCTTCACCACACCAAAACTT+AGG | 0.497897 | 3.1:+83881283 | None:intergenic |
| AACAAGAGGCTTGAGTTGGC+TGG | 0.508096 | 3.1:-83879577 | MS.gene80187:CDS |
| AATGGCTTCAACAGAGGAAG+TGG | 0.510195 | 3.1:+83876042 | None:intergenic |
| GAAAGTTGATGTTCACATCC+AGG | 0.510695 | 3.1:-83881191 | MS.gene80187:intron |
| GCATGGTCATGATTTGCAAA+TGG | 0.512791 | 3.1:+83877168 | None:intergenic |
| ATCCTTTCAAAAGGATGGAA+AGG | 0.513262 | 3.1:-83879378 | MS.gene80187:CDS |
| TTGCAAATCATGACCATGCT+AGG | 0.514874 | 3.1:-83877164 | MS.gene80187:CDS |
| CTCCAGTATGCATGGACAGA+AGG | 0.515563 | 3.1:-83876245 | MS.gene80187:CDS |
| AATCACGCCATTATCCAATA+GGG | 0.516901 | 3.1:+83877338 | None:intergenic |
| ACTAGAGGCTGCTTTGGGAA+AGG | 0.518204 | 3.1:-83876107 | MS.gene80187:CDS |
| TCTGATTAAGGGTGCTGAGA+AGG | 0.519826 | 3.1:-83880710 | MS.gene80187:intron |
| GGAAAGGGCATCGCTTGTGT+TGG | 0.523598 | 3.1:-83876091 | MS.gene80187:CDS |
| GGTTTCAAATATTCCATACT+GGG | 0.525085 | 3.1:-83880079 | MS.gene80187:CDS |
| ATATAATCAAGAAGATTCCT+TGG | 0.528881 | 3.1:-83876902 | MS.gene80187:CDS |
| AAAGCTAAAGCACACCGAAA+GGG | 0.531794 | 3.1:-83876623 | MS.gene80187:CDS |
| TCAACAGAGGAAGTGGAGAA+AGG | 0.532899 | 3.1:+83876049 | None:intergenic |
| AGCCTGAGAAGAATGCTTCT+GGG | 0.535263 | 3.1:+83877125 | None:intergenic |
| CCTATGAAGCTGGTCAGTAA+TGG | 0.535807 | 3.1:+83876024 | None:intergenic |
| TCGAAACAAGAGGCTTGAGT+TGG | 0.536571 | 3.1:-83879581 | MS.gene80187:CDS |
| AGATGCTTCCCAGACATGCC+AGG | 0.539702 | 3.1:-83881243 | MS.gene80187:CDS |
| AATATTTCTGAAGAGACTCT+GGG | 0.543313 | 3.1:-83880100 | MS.gene80187:CDS |
| TCTGATTGTCTTGGAAAACC+TGG | 0.545916 | 3.1:-83877009 | MS.gene80187:CDS |
| TTCCTAAATGGGGACTGGGT+TGG | 0.547112 | 3.1:-83878388 | MS.gene80187:CDS |
| GTTGATAGCCTTGATGATGA+TGG | 0.547320 | 3.1:-83876727 | MS.gene80187:CDS |
| TGGTCAAGTCTGATCTGTGT+TGG | 0.547872 | 3.1:-83880783 | MS.gene80187:CDS |
| ATGGTTGTTAAATTGGTGGA+AGG | 0.549390 | 3.1:-83880021 | MS.gene80187:CDS |
| TAAATGTGAAGCATTTCGTA+GGG | 0.550339 | 3.1:-83879806 | MS.gene80187:CDS |
| CTTTATACTATGGTCCGTCC+CGG | 0.551918 | 3.1:+83876642 | None:intergenic |
| AATGGCGTGATTGAGCTGAT+TGG | 0.554573 | 3.1:-83877327 | MS.gene80187:CDS |
| TGGAAGATTACCTATGAAGC+TGG | 0.555512 | 3.1:+83876014 | None:intergenic |
| TGCTAGGAAGCGGATGGGGA+AGG | 0.555662 | 3.1:-83879515 | MS.gene80187:CDS |
| GGCAAGGTATCTAGCTTACA+TGG | 0.555841 | 3.1:-83879662 | MS.gene80187:CDS |
| ATCGATTATGGAGAGGCAGA+TGG | 0.558185 | 3.1:-83879874 | MS.gene80187:CDS |
| GTGCGCATATTATCTGATGC+AGG | 0.558870 | 3.1:-83877441 | MS.gene80187:CDS |
| AAGTGCACTTTGCACATGCT+AGG | 0.559850 | 3.1:-83879531 | MS.gene80187:CDS |
| TTGGTGGAAGGTTCGACGGA+GGG | 0.559939 | 3.1:-83880009 | MS.gene80187:CDS |
| ATAAGTCATCCTCTGCAACC+TGG | 0.560391 | 3.1:+83881225 | None:intergenic |
| CAAACTTAACCGTAGCATAA+CGG | 0.562948 | 3.1:+83881326 | None:intergenic |
| TGGTGAGCTGCTGGAGCGCG+AGG | 0.563454 | 3.1:-83879557 | MS.gene80187:CDS |
| GATTGGTCCTGAAGAAGAAG+AGG | 0.564149 | 3.1:-83877310 | MS.gene80187:CDS |
| TCAGTATTTGTTTGGCAAAG+AGG | 0.564795 | 3.1:-83877265 | MS.gene80187:CDS |
| TGCACATGCTAGGAAGCGGA+TGG | 0.566345 | 3.1:-83879521 | MS.gene80187:CDS |
| CACTCGTCAATAGATTCTGC+GGG | 0.567248 | 3.1:+83879730 | None:intergenic |
| GATGTCATTGTCTGAAAGAG+TGG | 0.567955 | 3.1:+83877030 | None:intergenic |
| TGTCTGTCGAGATACCTGTA+TGG | 0.568259 | 3.1:-83879948 | MS.gene80187:CDS |
| CACATGCTAGGAAGCGGATG+GGG | 0.569157 | 3.1:-83879519 | MS.gene80187:CDS |
| TAAAGCTAAAGCACACCGAA+AGG | 0.569174 | 3.1:-83876624 | MS.gene80187:CDS |
| GTTCAGTACACAGGAAAGGT+CGG | 0.569216 | 3.1:-83879277 | MS.gene80187:CDS |
| AAGCTAAAGCACACCGAAAG+GGG | 0.569664 | 3.1:-83876622 | MS.gene80187:CDS |
| AATTTCCCCTTCACAAAACA+AGG | 0.569701 | 3.1:-83876193 | MS.gene80187:CDS |
| GTCAGTAATGGCTTCAACAG+AGG | 0.571703 | 3.1:+83876036 | None:intergenic |
| GATAAGTTCTCCAGTATGCA+TGG | 0.571930 | 3.1:-83876253 | MS.gene80187:CDS |
| TAAATTGGTGGAAGGTTCGA+CGG | 0.574279 | 3.1:-83880013 | MS.gene80187:CDS |
| ATGGAAAGCCATCATCATCA+AGG | 0.577034 | 3.1:+83876719 | None:intergenic |
| ACCCCAGATGGTGAAAATTG+TGG | 0.578472 | 3.1:-83878547 | MS.gene80187:CDS |
| GCACATGCTAGGAAGCGGAT+GGG | 0.578542 | 3.1:-83879520 | MS.gene80187:CDS |
| TCAGCTGTTCGATTGTGGGA+TGG | 0.579309 | 3.1:-83878461 | MS.gene80187:CDS |
| ATAAATGTGAAGCATTTCGT+AGG | 0.579430 | 3.1:-83879807 | MS.gene80187:CDS |
| CATCATCAAGGCTATCAACT+CGG | 0.579816 | 3.1:+83876731 | None:intergenic |
| ACAATGACATCTGATTGTCT+TGG | 0.579927 | 3.1:-83877018 | MS.gene80187:CDS |
| TCCAGTATGCATGGACAGAA+GGG | 0.580759 | 3.1:-83876244 | MS.gene80187:CDS |
| TACCGCGCTGCAACGAAGCA+CGG | 0.580917 | 3.1:+83876872 | None:intergenic |
| GCCGAAATCCTCAACGAACT+CGG | 0.582900 | 3.1:-83881541 | MS.gene80187:CDS |
| AACCAATCCATTACAAACCA+TGG | 0.584723 | 3.1:-83879326 | MS.gene80187:CDS |
| GTATCTAGCTTACATGGTGA+AGG | 0.589191 | 3.1:-83879656 | MS.gene80187:CDS |
| TGGATGAGTGAAGCTGAGAA+AGG | 0.589890 | 3.1:-83880763 | MS.gene80187:CDS |
| TGCTACGGTTAAGTTTGGGA+AGG | 0.589935 | 3.1:-83881320 | MS.gene80187:CDS |
| TGTCCAGGAGTTTGTCGCGA+AGG | 0.593618 | 3.1:+83876133 | None:intergenic |
| GTCTTTGTGGATAAAACAGT+TGG | 0.594545 | 3.1:+83877052 | None:intergenic |
| GATGGAAAGGATTTCTGGCG+TGG | 0.598035 | 3.1:-83879365 | MS.gene80187:CDS |
| GAGGACTTCAAGACTGCTTG+GGG | 0.598252 | 3.1:-83877291 | MS.gene80187:CDS |
| CCAGACATGCCAGGTTGCAG+AGG | 0.599813 | 3.1:-83881234 | MS.gene80187:CDS |
| AAAGTGGTGATATTATCATC+GGG | 0.600046 | 3.1:-83876678 | MS.gene80187:CDS |
| TACTAACAACCAAGAGTGGA+CGG | 0.601761 | 3.1:+83877409 | None:intergenic |
| GCACTCGTCAATAGATTCTG+CGG | 0.603702 | 3.1:+83879729 | None:intergenic |
| TTTATCGTCTGCCTCACGGA+TGG | 0.604454 | 3.1:+83879825 | None:intergenic |
| TGAACATTACCGTTATGCTA+CGG | 0.604890 | 3.1:-83881335 | MS.gene80187:CDS |
| TCAACCACAATGGAACACAT+AGG | 0.605155 | 3.1:-83881640 | None:intergenic |
| TTCTTAGAAGGATCAAAACC+AGG | 0.605160 | 3.1:+83881367 | None:intergenic |
| GATTAAAAGTGAACCTGATG+AGG | 0.605290 | 3.1:+83878301 | None:intergenic |
| TCGACGGAGGGAATTACAAA+CGG | 0.607790 | 3.1:-83879997 | MS.gene80187:CDS |
| AGAACTTATCTCCAAGAACT+GGG | 0.614017 | 3.1:+83876266 | None:intergenic |
| GTGCTGTCTTCGAATGATGA+GGG | 0.614672 | 3.1:-83876583 | MS.gene80187:CDS |
| ACTTTGCACATGCTAGGAAG+CGG | 0.619524 | 3.1:-83879525 | MS.gene80187:CDS |
| TATTAAAGGGGAGGATACGA+GGG | 0.623722 | 3.1:-83880833 | MS.gene80187:CDS |
| CAAACCTTACCCCAGTGAGA+AGG | 0.623788 | 3.1:+83878580 | None:intergenic |
| TGATAAAGATATTAAAGGGG+AGG | 0.623822 | 3.1:-83880842 | MS.gene80187:CDS |
| ATATTAAAGGGGAGGATACG+AGG | 0.624427 | 3.1:-83880834 | MS.gene80187:CDS |
| GGTACAACACTCTCCTAGCA+TGG | 0.629214 | 3.1:+83877151 | None:intergenic |
| CATTGATAAAGATATTAAAG+GGG | 0.630419 | 3.1:-83880845 | MS.gene80187:CDS |
| TATCATCACCGAGTTCGTTG+AGG | 0.631249 | 3.1:+83881533 | None:intergenic |
| TAATGGGCAGAATGCAATTG+TGG | 0.631335 | 3.1:-83876944 | MS.gene80187:CDS |
| AACTCCTGGACAACTACTAG+AGG | 0.636159 | 3.1:-83876122 | MS.gene80187:CDS |
| TCGTCAATAGATTCTGCGGG+TGG | 0.637226 | 3.1:+83879733 | None:intergenic |
| GCATATTATCTGATGCAGGA+AGG | 0.637268 | 3.1:-83877437 | MS.gene80187:CDS |
| TCAGTACACAGGAAAGGTCG+GGG | 0.637306 | 3.1:-83879275 | MS.gene80187:CDS |
| GCGGTGTGCTGATTCCGGGA+CGG | 0.638296 | 3.1:-83876656 | MS.gene80187:CDS |
| ATCCCACAATCGAACAGCTG+AGG | 0.642137 | 3.1:+83878463 | None:intergenic |
| GCAGATGAAGAGAAATAGGA+TGG | 0.645163 | 3.1:-83880040 | MS.gene80187:CDS |
| ATCGGTACTTACTACTCCTG+TGG | 0.646742 | 3.1:+83878504 | None:intergenic |
| AAGTATGGATTCAGTTACAT+CGG | 0.648107 | 3.1:+83878486 | None:intergenic |
| GTGGCTGTCAATGTGCATCT+CGG | 0.649101 | 3.1:-83876925 | MS.gene80187:CDS |
| TGATCTCATCGATTATGGAG+AGG | 0.650177 | 3.1:-83879881 | MS.gene80187:CDS |
| GAAGTGATAAGTTTAAGACT+GGG | 0.651148 | 3.1:-83880879 | MS.gene80187:CDS |
| ACAAGTTCAGTACACAGGAA+AGG | 0.656004 | 3.1:-83879281 | MS.gene80187:CDS |
| CGAAGCACGGTTCATAACCA+AGG | 0.659189 | 3.1:+83876885 | None:intergenic |
| TGTGCTGTCTTCGAATGATG+AGG | 0.662109 | 3.1:-83876584 | MS.gene80187:CDS |
| CAGAGCTACGAACTAGAAGA+CGG | 0.663373 | 3.1:-83878336 | MS.gene80187:CDS |
| TGTCGCGAAGGAAATGCATG+TGG | 0.663756 | 3.1:+83876145 | None:intergenic |
| ATTGATCTTCATCGTCGTCG+AGG | 0.665163 | 3.1:+83881569 | None:intergenic |
| ATGATTCTACAACTGTTCTG+GGG | 0.666426 | 3.1:-83878426 | MS.gene80187:CDS |
| CGTAACAGTGAGATCACCGA+AGG | 0.669550 | 3.1:+83881390 | None:intergenic |
| ATTGGTGGAAGGTTCGACGG+AGG | 0.669687 | 3.1:-83880010 | MS.gene80187:CDS |
| ATCACCGAAGGAATCGAAAG+CGG | 0.675536 | 3.1:+83881402 | None:intergenic |
| TGCTGTCTTCGAATGATGAG+GGG | 0.676097 | 3.1:-83876582 | MS.gene80187:CDS |
| AGATTACTAACAACCAAGAG+TGG | 0.676652 | 3.1:+83877405 | None:intergenic |
| AGGCAACAAGTTCAGTACAC+AGG | 0.677661 | 3.1:-83879286 | MS.gene80187:CDS |
| TCGCTTGTGTTGGTTCACTG+AGG | 0.682522 | 3.1:-83876081 | MS.gene80187:CDS |
| GGTGATTGTGAATTTGACCA+CGG | 0.685666 | 3.1:-83880742 | MS.gene80187:CDS |
| TGCAGGCATCCTTCTCACTG+GGG | 0.689696 | 3.1:-83878589 | MS.gene80187:intron |
| GTTGGAGCAAATTTGCAAAG+TGG | 0.689728 | 3.1:-83876694 | MS.gene80187:CDS |
| TAATCAGAAAGTAGCCTCCG+TGG | 0.691875 | 3.1:+83880725 | None:intergenic |
| AACCGTGCTTCGTTGCAGCG+CGG | 0.708946 | 3.1:-83876874 | MS.gene80187:CDS |
| AAATGTGAAGCATTTCGTAG+GGG | 0.709518 | 3.1:-83879805 | MS.gene80187:CDS |
| TCTCTTTGCATCCATCCGTG+AGG | 0.721646 | 3.1:-83879836 | MS.gene80187:CDS |
| GTGGTGATATTATCATCGGG+CGG | 0.734436 | 3.1:-83876675 | MS.gene80187:CDS |
| TGGCTGAATTAAGAAGAACA+AGG | 0.738169 | 3.1:-83879306 | MS.gene80187:CDS |
| AGCTACGAACTAGAAGACGG+AGG | 0.741616 | 3.1:-83878333 | MS.gene80187:CDS |
| GATTGTGAATTTGACCACGG+AGG | 0.779801 | 3.1:-83880739 | MS.gene80187:CDS |
| GTATTGGTCGAAGAACATGA+CGG | 0.801822 | 3.1:+83881483 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATATATATTCAGTTT+TGG | - | chr3.1:83879764-83879783 | MS.gene80187:CDS | 10.0% |
| !! | ACATTGATAAAGATATTAAA+GGG | - | chr3.1:83876806-83876825 | MS.gene80187:CDS | 15.0% |
| !! | TAAAAATGAAAACTTTGTAA+AGG | + | chr3.1:83876505-83876524 | None:intergenic | 15.0% |
| !! | TAAAACTAAATAAAATTACC+TGG | - | chr3.1:83878594-83878613 | MS.gene80187:intron | 15.0% |
| !! | TAAATAAGAGATTAATTTAC+AGG | + | chr3.1:83878820-83878839 | None:intergenic | 15.0% |
| !! | TACATTGATAAAGATATTAA+AGG | - | chr3.1:83876805-83876824 | MS.gene80187:CDS | 15.0% |
| !! | TCTTATGGATAAAAAAATTT+GGG | - | chr3.1:83881167-83881186 | MS.gene80187:intron | 15.0% |
| !!! | AAAAAAATTGCATTTTGATT+GGG | - | chr3.1:83877387-83877406 | MS.gene80187:CDS | 15.0% |
| !!! | AAGTTTTCATTTTTAAATGT+TGG | - | chr3.1:83876510-83876529 | MS.gene80187:intron | 15.0% |
| !!! | TAAAAAAATTGCATTTTGAT+TGG | - | chr3.1:83877386-83877405 | MS.gene80187:CDS | 15.0% |
| !!! | TGTAAAATGTTTTCAAAATA+CGG | - | chr3.1:83877338-83877357 | MS.gene80187:CDS | 15.0% |
| !!! | TTTATTTTAATAGAAGCTTA+TGG | - | chr3.1:83879039-83879058 | MS.gene80187:intron | 15.0% |
| !! | AAAAAATTAGATTTCAGTTG+TGG | + | chr3.1:83881299-83881318 | None:intergenic | 20.0% |
| !! | AATTTGTAGTTTCTATTTGA+TGG | - | chr3.1:83876547-83876566 | MS.gene80187:intron | 20.0% |
| !! | ATGTCTAACATATGATTAAA+TGG | - | chr3.1:83879620-83879639 | MS.gene80187:CDS | 20.0% |
| !! | CATTAAAGGATTAAAAAGAA+AGG | - | chr3.1:83877969-83877988 | MS.gene80187:intron | 20.0% |
| !! | CATTGATAAAGATATTAAAG+GGG | - | chr3.1:83876807-83876826 | MS.gene80187:CDS | 20.0% |
| !! | CTAGGATAAAATAATTCTAT+TGG | + | chr3.1:83878460-83878479 | None:intergenic | 20.0% |
| !! | GTCTTATGGATAAAAAAATT+TGG | - | chr3.1:83881166-83881185 | MS.gene80187:intron | 20.0% |
| !! | TAGAAGTTAAAAGTAACTTA+CGG | + | chr3.1:83878414-83878433 | None:intergenic | 20.0% |
| !!! | ATAGTTATGTTTTAAGTATC+TGG | - | chr3.1:83879554-83879573 | MS.gene80187:CDS | 20.0% |
| !!! | ATTGATAGCAATATTATAAG+GGG | + | chr3.1:83878562-83878581 | None:intergenic | 20.0% |
| !!! | CTTTTTAATCCTTTAATGTT+CGG | + | chr3.1:83877967-83877986 | None:intergenic | 20.0% |
| !!! | GATTGATAGCAATATTATAA+GGG | + | chr3.1:83878563-83878582 | None:intergenic | 20.0% |
| !!! | TGATTGATAGCAATATTATA+AGG | + | chr3.1:83878564-83878583 | None:intergenic | 20.0% |
| ! | AAAACACACACAAAAATCAA+AGG | + | chr3.1:83876621-83876640 | None:intergenic | 25.0% |
| ! | AAATAGGATGGTTGTTAAAT+TGG | - | chr3.1:83877624-83877643 | MS.gene80187:intron | 25.0% |
| ! | AATAGAGAACAACAAATGAA+AGG | - | chr3.1:83879831-83879850 | MS.gene80187:CDS | 25.0% |
| ! | AGAAGTTAAAAGTAACTTAC+GGG | + | chr3.1:83878413-83878432 | None:intergenic | 25.0% |
| ! | AGTCAAAATTGCAGAAATTT+GGG | - | chr3.1:83877280-83877299 | MS.gene80187:CDS | 25.0% |
| ! | ATAGAGAACAACAAATGAAA+GGG | - | chr3.1:83879832-83879851 | MS.gene80187:CDS | 25.0% |
| ! | ATATAATCAAGAAGATTCCT+TGG | - | chr3.1:83880750-83880769 | MS.gene80187:CDS | 25.0% |
| ! | ATCATAATTGAAGTAGTTCT+TGG | + | chr3.1:83881139-83881158 | None:intergenic | 25.0% |
| ! | CAAAGTCTGAATTCTATAAT+GGG | - | chr3.1:83880692-83880711 | MS.gene80187:intron | 25.0% |
| ! | CAAATTTATTGCAATTACTG+TGG | + | chr3.1:83880106-83880125 | None:intergenic | 25.0% |
| ! | CATAATTGGAAACATAACAT+AGG | + | chr3.1:83880016-83880035 | None:intergenic | 25.0% |
| ! | CTTGATATGTCATTCTTATT+AGG | - | chr3.1:83880442-83880461 | MS.gene80187:intron | 25.0% |
| ! | TAAACTACTTATACATGTGA+AGG | - | chr3.1:83878536-83878555 | MS.gene80187:CDS | 25.0% |
| ! | TACAATCAATTCATCAATTC+TGG | - | chr3.1:83876219-83876238 | MS.gene80187:CDS | 25.0% |
| ! | TAGTCAAAATTGCAGAAATT+TGG | - | chr3.1:83877279-83877298 | MS.gene80187:CDS | 25.0% |
| ! | TATGATAAAATTTGCAGGTT+AGG | - | chr3.1:83881361-83881380 | MS.gene80187:CDS | 25.0% |
| ! | TCAACAAGGGAAAAAAAATA+GGG | + | chr3.1:83880073-83880092 | None:intergenic | 25.0% |
| ! | TGTGGATTTATAACAATATC+AGG | + | chr3.1:83881492-83881511 | None:intergenic | 25.0% |
| ! | TGTTGTATGATAAAATTTGC+AGG | - | chr3.1:83881356-83881375 | MS.gene80187:CDS | 25.0% |
| ! | TTCAACAAGGGAAAAAAAAT+AGG | + | chr3.1:83880074-83880093 | None:intergenic | 25.0% |
| ! | TTCACATGTATAAGTAGTTT+AGG | + | chr3.1:83878537-83878556 | None:intergenic | 25.0% |
| ! | TTGTGGACTTGTAAAAAATT+TGG | - | chr3.1:83879122-83879141 | MS.gene80187:intron | 25.0% |
| !! | AAAGACAAAGTTTTCCTAAA+TGG | - | chr3.1:83879252-83879271 | MS.gene80187:intron | 25.0% |
| !! | AAGACAAAGTTTTCCTAAAT+GGG | - | chr3.1:83879253-83879272 | MS.gene80187:intron | 25.0% |
| !! | TATGTTTTTCCGAACATTAA+AGG | - | chr3.1:83877955-83877974 | MS.gene80187:intron | 25.0% |
| !! | TGGCATATTATTTTCAACAA+GGG | + | chr3.1:83880086-83880105 | None:intergenic | 25.0% |
| !! | TTGTTTGAAATTTGCTTTCT+GGG | - | chr3.1:83879661-83879680 | MS.gene80187:CDS | 25.0% |
| !! | TTTGTTTGAAATTTGCTTTC+TGG | - | chr3.1:83879660-83879679 | MS.gene80187:CDS | 25.0% |
| !!! | AGTGCTTTAAAATATGACAA+AGG | + | chr3.1:83879405-83879424 | None:intergenic | 25.0% |
| !!! | TATTTTGATGTTCAGATAAC+AGG | - | chr3.1:83876708-83876727 | MS.gene80187:CDS | 25.0% |
| !!! | TGTTCTCTATTTCTACAAAA+AGG | + | chr3.1:83879822-83879841 | None:intergenic | 25.0% |
| AAACAGAAATGGTTAACACA+AGG | + | chr3.1:83880156-83880175 | None:intergenic | 30.0% | |
| AAAGTGGTGATATTATCATC+GGG | - | chr3.1:83880974-83880993 | MS.gene80187:intron | 30.0% | |
| AAATGTGAAAAGAGCAGTAT+TGG | + | chr3.1:83879987-83880006 | None:intergenic | 30.0% | |
| AACCCTAAAACGTACAAAAT+CGG | + | chr3.1:83877016-83877035 | None:intergenic | 30.0% | |
| AAGGATTAAAAAGAAAGGCA+AGG | - | chr3.1:83877974-83877993 | MS.gene80187:intron | 30.0% | |
| AAGTATGGATTCAGTTACAT+CGG | + | chr3.1:83879169-83879188 | None:intergenic | 30.0% | |
| AATTGGAAACATAACATAGG+AGG | + | chr3.1:83880013-83880032 | None:intergenic | 30.0% | |
| ACAAGTAACAAAACTTATGC+AGG | + | chr3.1:83877096-83877115 | None:intergenic | 30.0% | |
| AGTAAAAAAAATCCCTAACC+TGG | + | chr3.1:83876482-83876501 | None:intergenic | 30.0% | |
| AGTAATCTGCTCAAGATTAA+AGG | - | chr3.1:83880262-83880281 | MS.gene80187:intron | 30.0% | |
| ATACGAGGGAAATAACTATT+GGG | - | chr3.1:83876833-83876852 | MS.gene80187:CDS | 30.0% | |
| CAAAGCTGAAATTGAGAATA+AGG | - | chr3.1:83880831-83880850 | MS.gene80187:CDS | 30.0% | |
| CAAAGTGGTGATATTATCAT+CGG | - | chr3.1:83880973-83880992 | MS.gene80187:intron | 30.0% | |
| CAAGTAACAAAACTTATGCA+GGG | + | chr3.1:83877095-83877114 | None:intergenic | 30.0% | |
| CCAAAATTAACAATGTCTTC+AGG | + | chr3.1:83880880-83880899 | None:intergenic | 30.0% | |
| CCAAAGTCTGAATTCTATAA+TGG | - | chr3.1:83880691-83880710 | MS.gene80187:intron | 30.0% | |
| CCATTATAGAATTCAGACTT+TGG | + | chr3.1:83880694-83880713 | None:intergenic | 30.0% | |
| GATAACACTGAACAAAAAAC+AGG | + | chr3.1:83877157-83877176 | None:intergenic | 30.0% | |
| GCAAAAAACAATATCCATAC+AGG | + | chr3.1:83877721-83877740 | None:intergenic | 30.0% | |
| GCTTACAAAGTCAACATAAT+TGG | + | chr3.1:83880030-83880049 | None:intergenic | 30.0% | |
| GGAAAGATACAGAGTAAAAT+TGG | - | chr3.1:83880898-83880917 | MS.gene80187:CDS | 30.0% | |
| GGTTTCAAATATTCCATACT+GGG | - | chr3.1:83877573-83877592 | MS.gene80187:intron | 30.0% | |
| TACAAAAGCAGTATTGTCTA+TGG | + | chr3.1:83877322-83877341 | None:intergenic | 30.0% | |
| TATAAACCAATCTTTGACAG+AGG | + | chr3.1:83879750-83879769 | None:intergenic | 30.0% | |
| TCAGGTATATGTTATGAAGA+AGG | - | chr3.1:83876747-83876766 | MS.gene80187:CDS | 30.0% | |
| TGATAAAGATATTAAAGGGG+AGG | - | chr3.1:83876810-83876829 | MS.gene80187:CDS | 30.0% | |
| TGTGTTAACCATTTCTGTTT+AGG | - | chr3.1:83880156-83880175 | MS.gene80187:intron | 30.0% | |
| TTATGATGCATCTTGTCTTA+TGG | - | chr3.1:83881152-83881171 | MS.gene80187:intron | 30.0% | |
| TTCAGATTCCATATCATTTG+TGG | - | chr3.1:83879293-83879312 | MS.gene80187:CDS | 30.0% | |
| TTGGAGACCATTTGTAATAA+TGG | + | chr3.1:83878226-83878245 | None:intergenic | 30.0% | |
| ! | AAATATTTCTGAAGAGACTC+TGG | - | chr3.1:83877551-83877570 | MS.gene80187:intron | 30.0% |
| ! | AATATTTCTGAAGAGACTCT+GGG | - | chr3.1:83877552-83877571 | MS.gene80187:intron | 30.0% |
| ! | AGACAAAGTTTTCCTAAATG+GGG | - | chr3.1:83879254-83879273 | MS.gene80187:intron | 30.0% |
| ! | ATAAATGTGAAGCATTTCGT+AGG | - | chr3.1:83877845-83877864 | MS.gene80187:intron | 30.0% |
| ! | ATTGTTGATCTCATCGATTA+TGG | - | chr3.1:83877766-83877785 | MS.gene80187:intron | 30.0% |
| ! | CATACAACAGTTTTTCTTAG+CGG | + | chr3.1:83881345-83881364 | None:intergenic | 30.0% |
| ! | CCTGAAGACATTGTTAATTT+TGG | - | chr3.1:83880877-83880896 | MS.gene80187:CDS | 30.0% |
| ! | GAAGTGATAAGTTTAAGACT+GGG | - | chr3.1:83876773-83876792 | MS.gene80187:CDS | 30.0% |
| ! | GTGGCATATTATTTTCAACA+AGG | + | chr3.1:83880087-83880106 | None:intergenic | 30.0% |
| ! | TAAATGTGAAGCATTTCGTA+GGG | - | chr3.1:83877846-83877865 | MS.gene80187:intron | 30.0% |
| ! | TCAGTACGTTCTAAATGAAA+TGG | - | chr3.1:83878773-83878792 | MS.gene80187:intron | 30.0% |
| ! | TTTTGTTCAGTGTTATCCAA+TGG | - | chr3.1:83877160-83877179 | MS.gene80187:CDS | 30.0% |
| !! | AAAGCATCGACTCTTATATT+TGG | + | chr3.1:83880574-83880593 | None:intergenic | 30.0% |
| !! | AAGCATCGACTCTTATATTT+GGG | + | chr3.1:83880573-83880592 | None:intergenic | 30.0% |
| !! | ATTGATTGTACGAGTTGATT+TGG | + | chr3.1:83876209-83876228 | None:intergenic | 30.0% |
| !! | GTTTTAAGTATCTGGAAACT+TGG | - | chr3.1:83879562-83879581 | MS.gene80187:CDS | 30.0% |
| !! | TGTGCTTTAGCTTTATACTA+TGG | + | chr3.1:83881023-83881042 | None:intergenic | 30.0% |
| !!! | TACCGATTTTGTACGTTTTA+GGG | - | chr3.1:83877011-83877030 | MS.gene80187:CDS | 30.0% |
| !!! | TGGATATTGTTTTTTGCTCT+TGG | - | chr3.1:83877724-83877743 | MS.gene80187:intron | 30.0% |
| !!! | TGTGTGTGTTTTTGAAATGT+GGG | - | chr3.1:83876629-83876648 | MS.gene80187:CDS | 30.0% |
| !!! | TTACCGATTTTGTACGTTTT+AGG | - | chr3.1:83877010-83877029 | MS.gene80187:CDS | 30.0% |
| !!! | TTAGTCCCTTTTTTGCTTTA+GGG | - | chr3.1:83877121-83877140 | MS.gene80187:CDS | 30.0% |
| !!! | TTGTGTGTGTTTTTGAAATG+TGG | - | chr3.1:83876628-83876647 | MS.gene80187:CDS | 30.0% |
| !!! | TTTAGTCCCTTTTTTGCTTT+AGG | - | chr3.1:83877120-83877139 | MS.gene80187:CDS | 30.0% |
| AAAAGGATGGAAAGGATTTC+TGG | - | chr3.1:83878282-83878301 | MS.gene80187:intron | 35.0% | |
| AACAACCTTCTTCCACTATA+TGG | + | chr3.1:83879454-83879473 | None:intergenic | 35.0% | |
| AACCAATCCATTACAAACCA+TGG | - | chr3.1:83878326-83878345 | MS.gene80187:CDS | 35.0% | |
| AATGTCCATTTCTGTGTAGT+TGG | + | chr3.1:83876061-83876080 | None:intergenic | 35.0% | |
| AATGTGCTGCGTTAAAATGT+AGG | + | chr3.1:83877430-83877449 | None:intergenic | 35.0% | |
| AATTTCCCCTTCACAAAACA+AGG | - | chr3.1:83881459-83881478 | MS.gene80187:CDS | 35.0% | |
| ACAACCTTCTTCCACTATAT+GGG | + | chr3.1:83879453-83879472 | None:intergenic | 35.0% | |
| ACAATGACATCTGATTGTCT+TGG | - | chr3.1:83880634-83880653 | MS.gene80187:intron | 35.0% | |
| ACTACTTTGTGGCACATTTA+TGG | + | chr3.1:83877263-83877282 | None:intergenic | 35.0% | |
| AGAACTTATCTCCAAGAACT+GGG | + | chr3.1:83881389-83881408 | None:intergenic | 35.0% | |
| AGATTACTAACAACCAAGAG+TGG | + | chr3.1:83880250-83880269 | None:intergenic | 35.0% | |
| AGCTGATACTGAACATGAAA+TGG | + | chr3.1:83878713-83878732 | None:intergenic | 35.0% | |
| ATCCTTTCAAAAGGATGGAA+AGG | - | chr3.1:83878274-83878293 | MS.gene80187:intron | 35.0% | |
| ATGATTCTACAACTGTTCTG+GGG | - | chr3.1:83879226-83879245 | MS.gene80187:intron | 35.0% | |
| ATGGTTGTTAAATTGGTGGA+AGG | - | chr3.1:83877631-83877650 | MS.gene80187:intron | 35.0% | |
| ATTGTCTTAGTAGCTTCAGA+TGG | - | chr3.1:83878914-83878933 | MS.gene80187:intron | 35.0% | |
| CAAACTTAACCGTAGCATAA+CGG | + | chr3.1:83876329-83876348 | None:intergenic | 35.0% | |
| CACTTACTTTACATGAGTCA+TGG | - | chr3.1:83879421-83879440 | MS.gene80187:CDS | 35.0% | |
| CAGTATTTGTTTGGCAAAGA+GGG | - | chr3.1:83880388-83880407 | MS.gene80187:intron | 35.0% | |
| GACGCTTCCATTATTACAAA+TGG | - | chr3.1:83878216-83878235 | MS.gene80187:intron | 35.0% | |
| GATACGAGGGAAATAACTAT+TGG | - | chr3.1:83876832-83876851 | MS.gene80187:CDS | 35.0% | |
| GATGATTCTACAACTGTTCT+GGG | - | chr3.1:83879225-83879244 | MS.gene80187:intron | 35.0% | |
| GATTAAAAGTGAACCTGATG+AGG | + | chr3.1:83879354-83879373 | None:intergenic | 35.0% | |
| GATTTCCACCTAAACAGAAA+TGG | + | chr3.1:83880167-83880186 | None:intergenic | 35.0% | |
| GCGCATATTTAACCTTCATT+CGG | + | chr3.1:83878487-83878506 | None:intergenic | 35.0% | |
| GGGTTTCAAATATTCCATAC+TGG | - | chr3.1:83877572-83877591 | MS.gene80187:intron | 35.0% | |
| GTATTGTCTATGGCATATTG+TGG | + | chr3.1:83877312-83877331 | None:intergenic | 35.0% | |
| GTCTTTGTGGATAAAACAGT+TGG | + | chr3.1:83880603-83880622 | None:intergenic | 35.0% | |
| GTTAACCATTTCTGTTTAGG+TGG | - | chr3.1:83880159-83880178 | MS.gene80187:intron | 35.0% | |
| GTTATGCTACGGTTAAGTTT+GGG | - | chr3.1:83876328-83876347 | MS.gene80187:intron | 35.0% | |
| GTTCTTCTACTAGCATATAC+TGG | - | chr3.1:83878018-83878037 | MS.gene80187:intron | 35.0% | |
| TAAATGGTGGTCAATATTGC+AGG | - | chr3.1:83877229-83877248 | MS.gene80187:CDS | 35.0% | |
| TAATAGAAGCTTATGGTTGC+AGG | - | chr3.1:83879046-83879065 | MS.gene80187:intron | 35.0% | |
| TACCTGGTCATTAAAACTCA+CGG | - | chr3.1:83878610-83878629 | MS.gene80187:intron | 35.0% | |
| TAGGATGGTTGTTAAATTGG+TGG | - | chr3.1:83877627-83877646 | MS.gene80187:intron | 35.0% | |
| TCAGTATTTGTTTGGCAAAG+AGG | - | chr3.1:83880387-83880406 | MS.gene80187:intron | 35.0% | |
| TGAAATGGAAGAAACAGAGA+TGG | + | chr3.1:83878698-83878717 | None:intergenic | 35.0% | |
| TGAACATTACCGTTATGCTA+CGG | - | chr3.1:83876317-83876336 | MS.gene80187:intron | 35.0% | |
| TGATGATTCTACAACTGTTC+TGG | - | chr3.1:83879224-83879243 | MS.gene80187:intron | 35.0% | |
| TGGCTGAATTAAGAAGAACA+AGG | - | chr3.1:83878346-83878365 | MS.gene80187:CDS | 35.0% | |
| TGTTCAGATCTGAGCATATA+AGG | - | chr3.1:83880803-83880822 | MS.gene80187:CDS | 35.0% | |
| TGTTCTTCTTAATTCAGCCA+TGG | + | chr3.1:83878346-83878365 | None:intergenic | 35.0% | |
| TTCGTCCCTAAAGCAAAAAA+GGG | + | chr3.1:83877129-83877148 | None:intergenic | 35.0% | |
| TTCTTAGAAGGATCAAAACC+AGG | + | chr3.1:83876288-83876307 | None:intergenic | 35.0% | |
| TTCTTAGAGGAACGTGTAAA+AGG | - | chr3.1:83877886-83877905 | MS.gene80187:intron | 35.0% | |
| TTTCGTCCCTAAAGCAAAAA+AGG | + | chr3.1:83877130-83877149 | None:intergenic | 35.0% | |
| ! | AAATGTGAAGCATTTCGTAG+GGG | - | chr3.1:83877847-83877866 | MS.gene80187:intron | 35.0% |
| ! | AATTCAGCCATGGTTTGTAA+TGG | + | chr3.1:83878336-83878355 | None:intergenic | 35.0% |
| ! | ATCCTTTCCATCCTTTTGAA+AGG | + | chr3.1:83878279-83878298 | None:intergenic | 35.0% |
| ! | CGAAGTGATAAGTTTAAGAC+TGG | - | chr3.1:83876772-83876791 | MS.gene80187:CDS | 35.0% |
| ! | CTTTTGAACATAACCCCTTT+CGG | + | chr3.1:83881046-83881065 | None:intergenic | 35.0% |
| ! | TGCAAATTTGCTCCAACAAA+TGG | + | chr3.1:83880955-83880974 | None:intergenic | 35.0% |
| !! | GGTTTTGATCCTTCTAAGAA+AGG | - | chr3.1:83876288-83876307 | MS.gene80187:intron | 35.0% |
| !!! | AACAATGCCTTGTTTTGTGA+AGG | + | chr3.1:83881469-83881488 | None:intergenic | 35.0% |
| !!! | ACAATGCCTTGTTTTGTGAA+GGG | + | chr3.1:83881468-83881487 | None:intergenic | 35.0% |
| !!! | CTGCAATTTTGACTACTTTG+TGG | + | chr3.1:83877274-83877293 | None:intergenic | 35.0% |
| AAAGCTAAAGCACACCGAAA+GGG | - | chr3.1:83881029-83881048 | MS.gene80187:intron | 40.0% | |
| AAGCATTCTTCTCAGGCTAT+TGG | - | chr3.1:83880532-83880551 | MS.gene80187:intron | 40.0% | |
| ACAAGTTCAGTACACAGGAA+AGG | - | chr3.1:83878371-83878390 | MS.gene80187:CDS | 40.0% | |
| ACTTTGTGGCACATTTATGG+CGG | + | chr3.1:83877260-83877279 | None:intergenic | 40.0% | |
| AGATCAATCCCTGAAAAGGT+TGG | + | chr3.1:83878884-83878903 | None:intergenic | 40.0% | |
| AGATCAGACTTGACCATAAC+AGG | + | chr3.1:83876865-83876884 | None:intergenic | 40.0% | |
| AGATGGCCACCATAAAAACT+CGG | + | chr3.1:83878681-83878700 | None:intergenic | 40.0% | |
| AGCGGTCAAATACAACTTAG+AGG | + | chr3.1:83881327-83881346 | None:intergenic | 40.0% | |
| AGGTAGTGTACATAGAGACA+TGG | + | chr3.1:83879696-83879715 | None:intergenic | 40.0% | |
| AGTCGCAGATGAAGAGAAAT+AGG | - | chr3.1:83877608-83877627 | MS.gene80187:intron | 40.0% | |
| ATATTAAAGGGGAGGATACG+AGG | - | chr3.1:83876818-83876837 | MS.gene80187:CDS | 40.0% | |
| ATGGAAAGCCATCATCATCA+AGG | + | chr3.1:83880936-83880955 | None:intergenic | 40.0% | |
| CAACACCAACTACACAGAAA+TGG | - | chr3.1:83876053-83876072 | MS.gene80187:CDS | 40.0% | |
| CACTTCACTATTCTAGTGCA+AGG | + | chr3.1:83879938-83879957 | None:intergenic | 40.0% | |
| CATCATCAAGGCTATCAACT+CGG | + | chr3.1:83880924-83880943 | None:intergenic | 40.0% | |
| CATTTACATCCCCTCAATGA+AGG | + | chr3.1:83878747-83878766 | None:intergenic | 40.0% | |
| CCGTCGAAAAACTGATAACA+GGG | - | chr3.1:83878041-83878060 | MS.gene80187:intron | 40.0% | |
| CGAAAGGGGTTATGTTCAAA+AGG | - | chr3.1:83881044-83881063 | MS.gene80187:intron | 40.0% | |
| CGTTATGCTACGGTTAAGTT+TGG | - | chr3.1:83876327-83876346 | MS.gene80187:intron | 40.0% | |
| CTTGGAAAACCTGGATATCT+TGG | - | chr3.1:83880652-83880671 | MS.gene80187:intron | 40.0% | |
| CTTGGACACATCCTTTCAAA+AGG | - | chr3.1:83878265-83878284 | MS.gene80187:intron | 40.0% | |
| GAACTTCTCGTTCTCCATAA+AGG | + | chr3.1:83878176-83878195 | None:intergenic | 40.0% | |
| GACACATCCTTTCAAAAGGA+TGG | - | chr3.1:83878269-83878288 | MS.gene80187:intron | 40.0% | |
| GACTAGATCAATCCCTGAAA+AGG | + | chr3.1:83878888-83878907 | None:intergenic | 40.0% | |
| GAGAACTTATCTCCAAGAAC+TGG | + | chr3.1:83881390-83881409 | None:intergenic | 40.0% | |
| GATAAGTTCTCCAGTATGCA+TGG | - | chr3.1:83881399-83881418 | MS.gene80187:CDS | 40.0% | |
| GATCAATCCCTGAAAAGGTT+GGG | + | chr3.1:83878883-83878902 | None:intergenic | 40.0% | |
| GATGTCATTGTCTGAAAGAG+TGG | + | chr3.1:83880625-83880644 | None:intergenic | 40.0% | |
| GCAGATGAAGAGAAATAGGA+TGG | - | chr3.1:83877612-83877631 | MS.gene80187:intron | 40.0% | |
| GCATATTATCTGATGCAGGA+AGG | - | chr3.1:83880215-83880234 | MS.gene80187:intron | 40.0% | |
| GGACTGTGTGTGTTAATTTC+AGG | - | chr3.1:83876729-83876748 | MS.gene80187:CDS | 40.0% | |
| GGTGACTGATTAAACCGTAT+TGG | + | chr3.1:83876188-83876207 | None:intergenic | 40.0% | |
| GGTGATTGTGAATTTGACCA+CGG | - | chr3.1:83876910-83876929 | MS.gene80187:CDS | 40.0% | |
| GTAAAAAATTTGGCTGCCAC+AGG | - | chr3.1:83879132-83879151 | MS.gene80187:intron | 40.0% | |
| GTCATGTTCTTCGACCAATA+CGG | - | chr3.1:83876171-83876190 | MS.gene80187:CDS | 40.0% | |
| GTGTTATCCAATGGCAGTTA+TGG | - | chr3.1:83877169-83877188 | MS.gene80187:CDS | 40.0% | |
| GTTGGAGCAAATTTGCAAAG+TGG | - | chr3.1:83880958-83880977 | MS.gene80187:intron | 40.0% | |
| GTTTGTTCGTAATCTGCACA+TGG | - | chr3.1:83881258-83881277 | MS.gene80187:CDS | 40.0% | |
| TAAAGCTAAAGCACACCGAA+AGG | - | chr3.1:83881028-83881047 | MS.gene80187:intron | 40.0% | |
| TAAATTGGTGGAAGGTTCGA+CGG | - | chr3.1:83877639-83877658 | MS.gene80187:intron | 40.0% | |
| TACTAACAACCAAGAGTGGA+CGG | + | chr3.1:83880246-83880265 | None:intergenic | 40.0% | |
| TATTAAAGGGGAGGATACGA+GGG | - | chr3.1:83876819-83876838 | MS.gene80187:CDS | 40.0% | |
| TCATCAGCACCTTTCTTAGA+AGG | + | chr3.1:83876300-83876319 | None:intergenic | 40.0% | |
| TCTGATTGTCTTGGAAAACC+TGG | - | chr3.1:83880643-83880662 | MS.gene80187:intron | 40.0% | |
| TGATGTTCACATCCAGGTTA+GGG | - | chr3.1:83876467-83876486 | MS.gene80187:intron | 40.0% | |
| TTACTCTGACCAAGATATCC+AGG | + | chr3.1:83880664-83880683 | None:intergenic | 40.0% | |
| TTGAAGTCCTCTTCTTCTTC+AGG | + | chr3.1:83880352-83880371 | None:intergenic | 40.0% | |
| TTGACCACCATTTACCACAT+CGG | + | chr3.1:83877223-83877242 | None:intergenic | 40.0% | |
| TTGATGTTCACATCCAGGTT+AGG | - | chr3.1:83876466-83876485 | MS.gene80187:intron | 40.0% | |
| TTGCAAATCATGACCATGCT+AGG | - | chr3.1:83880488-83880507 | MS.gene80187:intron | 40.0% | |
| TTGTCTATGGCATATTGTGG+TGG | + | chr3.1:83877309-83877328 | None:intergenic | 40.0% | |
| ! | AAGTTTTCCTAAATGGGGAC+TGG | - | chr3.1:83879259-83879278 | MS.gene80187:intron | 40.0% |
| ! | AGAACCCATATAGTGGAAGA+AGG | - | chr3.1:83879446-83879465 | MS.gene80187:CDS | 40.0% |
| ! | AGTCCACAATTTTCACCATC+TGG | + | chr3.1:83879111-83879130 | None:intergenic | 40.0% |
| ! | AGTTTTCCTAAATGGGGACT+GGG | - | chr3.1:83879260-83879279 | MS.gene80187:intron | 40.0% |
| ! | GAACGCTCTTCTTTTCTTAG+AGG | - | chr3.1:83877873-83877892 | MS.gene80187:intron | 40.0% |
| ! | GACTAGATGCCGAGTTTTTA+TGG | - | chr3.1:83878669-83878688 | MS.gene80187:intron | 40.0% |
| ! | GATGATGGCTTTCCATTTGT+TGG | - | chr3.1:83880940-83880959 | MS.gene80187:intron | 40.0% |
| ! | GCATGGTCATGATTTGCAAA+TGG | + | chr3.1:83880487-83880506 | None:intergenic | 40.0% |
| ! | GGAGGCTACTTTCTGATTAA+GGG | - | chr3.1:83876931-83876950 | MS.gene80187:CDS | 40.0% |
| ! | GTATCTAGCTTACATGGTGA+AGG | - | chr3.1:83877996-83878015 | MS.gene80187:intron | 40.0% |
| ! | GTATTGGTCGAAGAACATGA+CGG | + | chr3.1:83876172-83876191 | None:intergenic | 40.0% |
| ! | GTCCACAATTTTCACCATCT+GGG | + | chr3.1:83879110-83879129 | None:intergenic | 40.0% |
| ! | TAATGGGCAGAATGCAATTG+TGG | - | chr3.1:83880708-83880727 | MS.gene80187:intron | 40.0% |
| ! | TAGATGCCGAGTTTTTATGG+TGG | - | chr3.1:83878672-83878691 | MS.gene80187:intron | 40.0% |
| ! | TAGCTCTGCCACAAATGATA+TGG | + | chr3.1:83879304-83879323 | None:intergenic | 40.0% |
| ! | TCCACAATTTTCACCATCTG+GGG | + | chr3.1:83879109-83879128 | None:intergenic | 40.0% |
| ! | TGATCTCATCGATTATGGAG+AGG | - | chr3.1:83877771-83877790 | MS.gene80187:intron | 40.0% |
| ! | TGGGGTGTTCAGTATTTGTT+TGG | - | chr3.1:83880379-83880398 | MS.gene80187:intron | 40.0% |
| !! | AACCGTGAGTTTTAATGACC+AGG | + | chr3.1:83878615-83878634 | None:intergenic | 40.0% |
| !! | AGCCATGGTTTGTAATGGAT+TGG | + | chr3.1:83878331-83878350 | None:intergenic | 40.0% |
| !! | CCCTGTTATCAGTTTTTCGA+CGG | + | chr3.1:83878044-83878063 | None:intergenic | 40.0% |
| !! | CTAAGTTTTGGTGTGGTGAA+GGG | - | chr3.1:83876370-83876389 | MS.gene80187:intron | 40.0% |
| !! | GAAAGTTGATGTTCACATCC+AGG | - | chr3.1:83876461-83876480 | MS.gene80187:intron | 40.0% |
| !! | GTTGATAGCCTTGATGATGA+TGG | - | chr3.1:83880925-83880944 | MS.gene80187:intron | 40.0% |
| !!! | CAATGCCTTGTTTTGTGAAG+GGG | + | chr3.1:83881467-83881486 | None:intergenic | 40.0% |
| AACTCCTGGACAACTACTAG+AGG | - | chr3.1:83881530-83881549 | MS.gene80187:CDS | 45.0% | |
| AAGAGGACTTCAAGACTGCT+TGG | - | chr3.1:83880359-83880378 | MS.gene80187:intron | 45.0% | |
| AAGCTAAAGCACACCGAAAG+GGG | - | chr3.1:83881030-83881049 | MS.gene80187:intron | 45.0% | |
| AAGTGCACTTTGCACATGCT+AGG | - | chr3.1:83878121-83878140 | MS.gene80187:intron | 45.0% | |
| AATGGCGTGATTGAGCTGAT+TGG | - | chr3.1:83880325-83880344 | MS.gene80187:intron | 45.0% | |
| AATGGCTTCAACAGAGGAAG+TGG | + | chr3.1:83881613-83881632 | None:intergenic | 45.0% | |
| ACAACTACTAGAGGCTGCTT+TGG | - | chr3.1:83881539-83881558 | MS.gene80187:CDS | 45.0% | |
| ACAACTCACAAGGGGAAAGT+GGG | + | chr3.1:83879913-83879932 | None:intergenic | 45.0% | |
| ACCAATCTTTGACAGAGGAG+AGG | + | chr3.1:83879745-83879764 | None:intergenic | 45.0% | |
| ACCCCAGATGGTGAAAATTG+TGG | - | chr3.1:83879105-83879124 | MS.gene80187:intron | 45.0% | |
| ACCGAGTTCGTTGAGGATTT+CGG | + | chr3.1:83876115-83876134 | None:intergenic | 45.0% | |
| ACTGACCAGCTTCATAGGTA+AGG | - | chr3.1:83881633-83881652 | MS.gene80187:CDS | 45.0% | |
| ACTTTGCACATGCTAGGAAG+CGG | - | chr3.1:83878127-83878146 | MS.gene80187:intron | 45.0% | |
| AGAGGACTTCAAGACTGCTT+GGG | - | chr3.1:83880360-83880379 | MS.gene80187:intron | 45.0% | |
| AGCCTGAGAAGAATGCTTCT+GGG | + | chr3.1:83880530-83880549 | None:intergenic | 45.0% | |
| AGGCAACAAGTTCAGTACAC+AGG | - | chr3.1:83878366-83878385 | MS.gene80187:CDS | 45.0% | |
| ATAAGTCATCCTCTGCAACC+TGG | + | chr3.1:83876430-83876449 | None:intergenic | 45.0% | |
| ATCACCGAAGGAATCGAAAG+CGG | + | chr3.1:83876253-83876272 | None:intergenic | 45.0% | |
| ATCGAACAGCTGAGGAAGTA+TGG | + | chr3.1:83879184-83879203 | None:intergenic | 45.0% | |
| ATCGATTATGGAGAGGCAGA+TGG | - | chr3.1:83877778-83877797 | MS.gene80187:intron | 45.0% | |
| ATCGGTACTTACTACTCCTG+TGG | + | chr3.1:83879151-83879170 | None:intergenic | 45.0% | |
| ATTGATCTTCATCGTCGTCG+AGG | + | chr3.1:83876086-83876105 | None:intergenic | 45.0% | |
| CACATTTATCGTCTGCCTCA+CGG | + | chr3.1:83877834-83877853 | None:intergenic | 45.0% | |
| CACTCGTCAATAGATTCTGC+GGG | + | chr3.1:83877925-83877944 | None:intergenic | 45.0% | |
| CAGAGCTACGAACTAGAAGA+CGG | - | chr3.1:83879316-83879335 | MS.gene80187:CDS | 45.0% | |
| CATGGAGAGAACCCATATAG+TGG | - | chr3.1:83879439-83879458 | MS.gene80187:CDS | 45.0% | |
| CCAATCTTTGACAGAGGAGA+GGG | + | chr3.1:83879744-83879763 | None:intergenic | 45.0% | |
| CCATTACTGACCAGCTTCAT+AGG | - | chr3.1:83881628-83881647 | MS.gene80187:CDS | 45.0% | |
| CCTATGAAGCTGGTCAGTAA+TGG | + | chr3.1:83881631-83881650 | None:intergenic | 45.0% | |
| CCTTCACCACACCAAAACTT+AGG | + | chr3.1:83876372-83876391 | None:intergenic | 45.0% | |
| CTCCAGTAGAAAACGCTCTT+TGG | + | chr3.1:83878245-83878264 | None:intergenic | 45.0% | |
| CTGTAATGCGCCTTCATTGA+GGG | - | chr3.1:83878734-83878753 | MS.gene80187:intron | 45.0% | |
| CTTTATACTATGGTCCGTCC+CGG | + | chr3.1:83881013-83881032 | None:intergenic | 45.0% | |
| GATTGTGAATTTGACCACGG+AGG | - | chr3.1:83876913-83876932 | MS.gene80187:CDS | 45.0% | |
| GCACTCGTCAATAGATTCTG+CGG | + | chr3.1:83877926-83877945 | None:intergenic | 45.0% | |
| GCCGTCGAAAAACTGATAAC+AGG | - | chr3.1:83878040-83878059 | MS.gene80187:intron | 45.0% | |
| GGTCAAAATCTGCCACCAAT+AGG | + | chr3.1:83877197-83877216 | None:intergenic | 45.0% | |
| GTCAGTAATGGCTTCAACAG+AGG | + | chr3.1:83881619-83881638 | None:intergenic | 45.0% | |
| GTCTGAAAGAGTGGTCTTTG+TGG | + | chr3.1:83880616-83880635 | None:intergenic | 45.0% | |
| GTGCGCATATTATCTGATGC+AGG | - | chr3.1:83880211-83880230 | MS.gene80187:intron | 45.0% | |
| GTGCTGTCTTCGAATGATGA+GGG | - | chr3.1:83881069-83881088 | MS.gene80187:intron | 45.0% | |
| GTGGTGATATTATCATCGGG+CGG | - | chr3.1:83880977-83880996 | MS.gene80187:intron | 45.0% | |
| GTTCAGTACACAGGAAAGGT+CGG | - | chr3.1:83878375-83878394 | MS.gene80187:CDS | 45.0% | |
| TAACCTTCATTCGGTCAGCT+AGG | + | chr3.1:83878478-83878497 | None:intergenic | 45.0% | |
| TAATCAGAAAGTAGCCTCCG+TGG | + | chr3.1:83876930-83876949 | None:intergenic | 45.0% | |
| TAGCCTGAGAAGAATGCTTC+TGG | + | chr3.1:83880531-83880550 | None:intergenic | 45.0% | |
| TATCATCACCGAGTTCGTTG+AGG | + | chr3.1:83876122-83876141 | None:intergenic | 45.0% | |
| TATCCTAGCTGACCGAATGA+AGG | - | chr3.1:83878472-83878491 | MS.gene80187:CDS | 45.0% | |
| TATTGGGAGACTGCCTGTTA+TGG | - | chr3.1:83876849-83876868 | MS.gene80187:CDS | 45.0% | |
| TCAACAGAGGAAGTGGAGAA+AGG | + | chr3.1:83881606-83881625 | None:intergenic | 45.0% | |
| TCAGGGATTGATCTAGTCTC+TGG | - | chr3.1:83878890-83878909 | MS.gene80187:intron | 45.0% | |
| TCCAGTATGCATGGACAGAA+GGG | - | chr3.1:83881408-83881427 | MS.gene80187:CDS | 45.0% | |
| TCGAAACAAGAGGCTTGAGT+TGG | - | chr3.1:83878071-83878090 | MS.gene80187:intron | 45.0% | |
| TCGACGGAGGGAATTACAAA+CGG | - | chr3.1:83877655-83877674 | MS.gene80187:intron | 45.0% | |
| TCTGTAATGCGCCTTCATTG+AGG | - | chr3.1:83878733-83878752 | MS.gene80187:intron | 45.0% | |
| TGCAAGGTCACAACTCACAA+GGG | + | chr3.1:83879922-83879941 | None:intergenic | 45.0% | |
| TGCTACGGTTAAGTTTGGGA+AGG | - | chr3.1:83876332-83876351 | MS.gene80187:intron | 45.0% | |
| TGCTGTCTTCGAATGATGAG+GGG | - | chr3.1:83881070-83881089 | MS.gene80187:intron | 45.0% | |
| TGGATGAGTGAAGCTGAGAA+AGG | - | chr3.1:83876889-83876908 | MS.gene80187:CDS | 45.0% | |
| TGGTCAAGTCTGATCTGTGT+TGG | - | chr3.1:83876869-83876888 | MS.gene80187:CDS | 45.0% | |
| TGTAATGCGCCTTCATTGAG+GGG | - | chr3.1:83878735-83878754 | MS.gene80187:intron | 45.0% | |
| TGTCTGTCGAGATACCTGTA+TGG | - | chr3.1:83877704-83877723 | MS.gene80187:intron | 45.0% | |
| TGTGCTGTCTTCGAATGATG+AGG | - | chr3.1:83881068-83881087 | MS.gene80187:intron | 45.0% | |
| TTCAGTACACAGGAAAGGTC+GGG | - | chr3.1:83878376-83878395 | MS.gene80187:CDS | 45.0% | |
| TTCCTCAGCTGTTCGATTGT+GGG | - | chr3.1:83879187-83879206 | MS.gene80187:intron | 45.0% | |
| TTGAAAGCAACAGCCCAGTA+TGG | + | chr3.1:83877589-83877608 | None:intergenic | 45.0% | |
| ! | ACAATTTTCACCATCTGGGG+TGG | + | chr3.1:83879106-83879125 | None:intergenic | 45.0% |
| ! | ATCAACGTCCCAACCTTTTC+AGG | - | chr3.1:83878872-83878891 | MS.gene80187:intron | 45.0% |
| ! | CAACGAACTCGGTGATGATA+TGG | - | chr3.1:83876122-83876141 | MS.gene80187:CDS | 45.0% |
| ! | CAACTACTAGAGGCTGCTTT+GGG | - | chr3.1:83881540-83881559 | MS.gene80187:CDS | 45.0% |
| ! | CGGAGGCTACTTTCTGATTA+AGG | - | chr3.1:83876930-83876949 | MS.gene80187:CDS | 45.0% |
| ! | GATTGGTCCTGAAGAAGAAG+AGG | - | chr3.1:83880342-83880361 | MS.gene80187:intron | 45.0% |
| ! | GGCAAGGTATCTAGCTTACA+TGG | - | chr3.1:83877990-83878009 | MS.gene80187:intron | 45.0% |
| ! | GGGACGATTTTCGAAACAAG+AGG | - | chr3.1:83878061-83878080 | MS.gene80187:intron | 45.0% |
| ! | TAAGTGACAGCGTTTTGCAG+AGG | + | chr3.1:83879716-83879735 | None:intergenic | 45.0% |
| ! | TCAACGTCCCAACCTTTTCA+GGG | - | chr3.1:83878873-83878892 | MS.gene80187:intron | 45.0% |
| ! | TGTTTTCTTTCCACCCCAGA+TGG | - | chr3.1:83879093-83879112 | MS.gene80187:intron | 45.0% |
| !! | AGATTTTGACCTCACCGATG+TGG | - | chr3.1:83877206-83877225 | MS.gene80187:CDS | 45.0% |
| !! | ATCCCAGAAGCATTCTTCTC+AGG | - | chr3.1:83880525-83880544 | MS.gene80187:intron | 45.0% |
| !! | CCTAAGTTTTGGTGTGGTGA+AGG | - | chr3.1:83876369-83876388 | MS.gene80187:intron | 45.0% |
| !! | GAGAAGAATGCTTCTGGGAT+TGG | + | chr3.1:83880525-83880544 | None:intergenic | 45.0% |
| !! | TCTGATTAAGGGTGCTGAGA+AGG | - | chr3.1:83876942-83876961 | MS.gene80187:CDS | 45.0% |
| !! | TTTGGGATTTCTGGAGTCTC+AGG | - | chr3.1:83881434-83881453 | MS.gene80187:CDS | 45.0% |
| !!! | CATGGACAGAAGGGTGTTTT+GGG | - | chr3.1:83881417-83881436 | MS.gene80187:CDS | 45.0% |
| !!! | CTCCAAAGAGCGTTTTCTAC+TGG | - | chr3.1:83878240-83878259 | MS.gene80187:intron | 45.0% |
| !!! | GAAGGGTGTTTTGGGATTTC+TGG | - | chr3.1:83881425-83881444 | MS.gene80187:CDS | 45.0% |
| AAGGATTCTCCGTCCACTCT+TGG | - | chr3.1:83880234-83880253 | MS.gene80187:intron | 50.0% | |
| ACCCTTCTGTCCATGCATAC+TGG | + | chr3.1:83881412-83881431 | None:intergenic | 50.0% | |
| ACTCGGCATCTAGTCTACAC+AGG | + | chr3.1:83878664-83878683 | None:intergenic | 50.0% | |
| AGCTACGAACTAGAAGACGG+AGG | - | chr3.1:83879319-83879338 | MS.gene80187:CDS | 50.0% | |
| ATAGGCGCCATAACTGCCAT+TGG | + | chr3.1:83877179-83877198 | None:intergenic | 50.0% | |
| ATCCCACAATCGAACAGCTG+AGG | + | chr3.1:83879192-83879211 | None:intergenic | 50.0% | |
| ATGGCAGTTATGGCGCCTAT+TGG | - | chr3.1:83877179-83877198 | MS.gene80187:CDS | 50.0% | |
| CAAACCTTACCCCAGTGAGA+AGG | + | chr3.1:83879075-83879094 | None:intergenic | 50.0% | |
| CACAACTCACAAGGGGAAAG+TGG | + | chr3.1:83879914-83879933 | None:intergenic | 50.0% | |
| CACCATTTACCACATCGGTG+AGG | + | chr3.1:83877218-83877237 | None:intergenic | 50.0% | |
| CCCTCTCCTCTGTCAAAGAT+TGG | - | chr3.1:83879741-83879760 | MS.gene80187:CDS | 50.0% | |
| CGAAGCACGGTTCATAACCA+AGG | + | chr3.1:83880770-83880789 | None:intergenic | 50.0% | |
| CGTAACAGTGAGATCACCGA+AGG | + | chr3.1:83876265-83876284 | None:intergenic | 50.0% | |
| CTCACCGATGTGGTAAATGG+TGG | - | chr3.1:83877216-83877235 | MS.gene80187:CDS | 50.0% | |
| CTCCAGTATGCATGGACAGA+AGG | - | chr3.1:83881407-83881426 | MS.gene80187:CDS | 50.0% | |
| CTTCCTCAGCTGTTCGATTG+TGG | - | chr3.1:83879186-83879205 | MS.gene80187:intron | 50.0% | |
| GACCTCACCGATGTGGTAAA+TGG | - | chr3.1:83877213-83877232 | MS.gene80187:CDS | 50.0% | |
| GAGGAATGAGTTGCCTCATC+AGG | - | chr3.1:83879338-83879357 | MS.gene80187:CDS | 50.0% | |
| GAGGACTTCAAGACTGCTTG+GGG | - | chr3.1:83880361-83880380 | MS.gene80187:intron | 50.0% | |
| GCAAGGTCACAACTCACAAG+GGG | + | chr3.1:83879921-83879940 | None:intergenic | 50.0% | |
| GCCGAAATCCTCAACGAACT+CGG | - | chr3.1:83876111-83876130 | MS.gene80187:CDS | 50.0% | |
| GCTCTGCAGAGAGACCTTTA+TGG | - | chr3.1:83878159-83878178 | MS.gene80187:intron | 50.0% | |
| GGTACAACACTCTCCTAGCA+TGG | + | chr3.1:83880504-83880523 | None:intergenic | 50.0% | |
| GTGCAAGGTCACAACTCACA+AGG | + | chr3.1:83879923-83879942 | None:intergenic | 50.0% | |
| GTGGCTGTCAATGTGCATCT+CGG | - | chr3.1:83880727-83880746 | MS.gene80187:CDS | 50.0% | |
| TCAGCTGTTCGATTGTGGGA+TGG | - | chr3.1:83879191-83879210 | MS.gene80187:intron | 50.0% | |
| TCAGTACACAGGAAAGGTCG+GGG | - | chr3.1:83878377-83878396 | MS.gene80187:CDS | 50.0% | |
| TCGTCAATAGATTCTGCGGG+TGG | + | chr3.1:83877922-83877941 | None:intergenic | 50.0% | |
| TCTCTTTGCATCCATCCGTG+AGG | - | chr3.1:83877816-83877835 | MS.gene80187:intron | 50.0% | |
| TGTCGCGAAGGAAATGCATG+TGG | + | chr3.1:83881510-83881529 | None:intergenic | 50.0% | |
| TTCCTAAATGGGGACTGGGT+TGG | - | chr3.1:83879264-83879283 | MS.gene80187:CDS | 50.0% | |
| TTCGTTGAGGATTTCGGCGT+TGG | + | chr3.1:83876109-83876128 | None:intergenic | 50.0% | |
| TTGCAGGCATCCTTCTCACT+GGG | - | chr3.1:83879062-83879081 | MS.gene80187:intron | 50.0% | |
| TTTATCGTCTGCCTCACGGA+TGG | + | chr3.1:83877830-83877849 | None:intergenic | 50.0% | |
| TTTCCTTCGCGACAAACTCC+TGG | - | chr3.1:83881516-83881535 | MS.gene80187:CDS | 50.0% | |
| ! | CAAGCCGCTTTCGATTCCTT+CGG | - | chr3.1:83876246-83876265 | MS.gene80187:CDS | 50.0% |
| ! | CGCTTGAGCGACCTAAGTTT+TGG | - | chr3.1:83876358-83876377 | MS.gene80187:intron | 50.0% |
| ! | GAGCGTTTTCTACTGGAGCT+TGG | - | chr3.1:83878247-83878266 | MS.gene80187:intron | 50.0% |
| !! | AACAAGAGGCTTGAGTTGGC+TGG | - | chr3.1:83878075-83878094 | MS.gene80187:intron | 50.0% |
| !! | ACTAGAGGCTGCTTTGGGAA+AGG | - | chr3.1:83881545-83881564 | MS.gene80187:CDS | 50.0% |
| !! | CTAGAGGCTGCTTTGGGAAA+GGG | - | chr3.1:83881546-83881565 | MS.gene80187:CDS | 50.0% |
| !! | GAGCGACCTAAGTTTTGGTG+TGG | - | chr3.1:83876363-83876382 | MS.gene80187:intron | 50.0% |
| !! | GATGGAAAGGATTTCTGGCG+TGG | - | chr3.1:83878287-83878306 | MS.gene80187:intron | 50.0% |
| !! | TCGCTTGTGTTGGTTCACTG+AGG | - | chr3.1:83881571-83881590 | MS.gene80187:CDS | 50.0% |
| !! | TGCTGTTGTTTCGCTGAGAC+AGG | - | chr3.1:83881101-83881120 | MS.gene80187:intron | 50.0% |
| !!! | GCATGGACAGAAGGGTGTTT+TGG | - | chr3.1:83881416-83881435 | MS.gene80187:CDS | 50.0% |
| AGATGCTTCCCAGACATGCC+AGG | - | chr3.1:83876409-83876428 | MS.gene80187:intron | 55.0% | |
| ATTGGTGGAAGGTTCGACGG+AGG | - | chr3.1:83877642-83877661 | MS.gene80187:intron | 55.0% | |
| CACATGCTAGGAAGCGGATG+GGG | - | chr3.1:83878133-83878152 | MS.gene80187:intron | 55.0% | |
| CAGGTTAGGAGCCCAGTTCT+TGG | - | chr3.1:83881375-83881394 | MS.gene80187:CDS | 55.0% | |
| CTCCAACCCAGTCCCCATTT+AGG | + | chr3.1:83879269-83879288 | None:intergenic | 55.0% | |
| CTCTGCAACCTGGCATGTCT+GGG | + | chr3.1:83876420-83876439 | None:intergenic | 55.0% | |
| CTGGCGTGGTTGCAACTCTT+GGG | - | chr3.1:83878301-83878320 | MS.gene80187:intron | 55.0% | |
| GCACATGCTAGGAAGCGGAT+GGG | - | chr3.1:83878132-83878151 | MS.gene80187:intron | 55.0% | |
| GCAGCCTCTAGTAGTTGTCC+AGG | + | chr3.1:83881537-83881556 | None:intergenic | 55.0% | |
| GCAGTTATGGCGCCTATTGG+TGG | - | chr3.1:83877182-83877201 | MS.gene80187:CDS | 55.0% | |
| GCATCCTTCTCACTGGGGTA+AGG | - | chr3.1:83879068-83879087 | MS.gene80187:intron | 55.0% | |
| GGTGATCTCACTGTTACGCC+TGG | - | chr3.1:83876267-83876286 | MS.gene80187:CDS | 55.0% | |
| GTTGCAGGCATCCTTCTCAC+TGG | - | chr3.1:83879061-83879080 | MS.gene80187:intron | 55.0% | |
| TCTGGCGTGGTTGCAACTCT+TGG | - | chr3.1:83878300-83878319 | MS.gene80187:intron | 55.0% | |
| TGCACATGCTAGGAAGCGGA+TGG | - | chr3.1:83878131-83878150 | MS.gene80187:intron | 55.0% | |
| TGCAGGCATCCTTCTCACTG+GGG | - | chr3.1:83879063-83879082 | MS.gene80187:intron | 55.0% | |
| TGTCCAGGAGTTTGTCGCGA+AGG | + | chr3.1:83881522-83881541 | None:intergenic | 55.0% | |
| TTGGTGGAAGGTTCGACGGA+GGG | - | chr3.1:83877643-83877662 | MS.gene80187:intron | 55.0% | |
| !! | GGAAAGGGCATCGCTTGTGT+TGG | - | chr3.1:83881561-83881580 | MS.gene80187:CDS | 55.0% |
| AACCGTGCTTCGTTGCAGCG+CGG | - | chr3.1:83880778-83880797 | MS.gene80187:CDS | 60.0% | |
| CCAGACATGCCAGGTTGCAG+AGG | - | chr3.1:83876418-83876437 | MS.gene80187:intron | 60.0% | |
| CCTCTGCAACCTGGCATGTC+TGG | + | chr3.1:83876421-83876440 | None:intergenic | 60.0% | |
| TACCGCGCTGCAACGAAGCA+CGG | + | chr3.1:83880783-83880802 | None:intergenic | 60.0% | |
| TGCTAGGAAGCGGATGGGGA+AGG | - | chr3.1:83878137-83878156 | MS.gene80187:intron | 60.0% | |
| ! | TGAGTTGGCTGGTGAGCTGC+TGG | - | chr3.1:83878086-83878105 | MS.gene80187:intron | 60.0% |
| !! | ATCGGGCGGTGTGCTGATTC+CGG | - | chr3.1:83880991-83881010 | MS.gene80187:intron | 60.0% |
| !! | GCGGTGTGCTGATTCCGGGA+CGG | - | chr3.1:83880996-83881015 | MS.gene80187:intron | 65.0% |
| !! | TCGGGCGGTGTGCTGATTCC+GGG | - | chr3.1:83880992-83881011 | MS.gene80187:intron | 65.0% |
| TGGTGAGCTGCTGGAGCGCG+AGG | - | chr3.1:83878095-83878114 | MS.gene80187:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 83876021 | 83881653 | 83876021 | ID=MS.gene80187 |
| chr3.1 | mRNA | 83876021 | 83881653 | 83876021 | ID=MS.gene80187.t1;Parent=MS.gene80187 |
| chr3.1 | exon | 83881192 | 83881653 | 83881192 | ID=MS.gene80187.t1.exon1;Parent=MS.gene80187.t1 |
| chr3.1 | CDS | 83881192 | 83881653 | 83881192 | ID=cds.MS.gene80187.t1;Parent=MS.gene80187.t1 |
| chr3.1 | exon | 83880711 | 83880923 | 83880711 | ID=MS.gene80187.t1.exon2;Parent=MS.gene80187.t1 |
| chr3.1 | CDS | 83880711 | 83880923 | 83880711 | ID=cds.MS.gene80187.t1;Parent=MS.gene80187.t1 |
| chr3.1 | exon | 83879262 | 83880142 | 83879262 | ID=MS.gene80187.t1.exon3;Parent=MS.gene80187.t1 |
| chr3.1 | CDS | 83879262 | 83880142 | 83879262 | ID=cds.MS.gene80187.t1;Parent=MS.gene80187.t1 |
| chr3.1 | exon | 83878315 | 83878606 | 83878315 | ID=MS.gene80187.t1.exon4;Parent=MS.gene80187.t1 |
| chr3.1 | CDS | 83878315 | 83878606 | 83878315 | ID=cds.MS.gene80187.t1;Parent=MS.gene80187.t1 |
| chr3.1 | exon | 83876552 | 83877496 | 83876552 | ID=MS.gene80187.t1.exon5;Parent=MS.gene80187.t1 |
| chr3.1 | CDS | 83876552 | 83877496 | 83876552 | ID=cds.MS.gene80187.t1;Parent=MS.gene80187.t1 |
| chr3.1 | exon | 83876021 | 83876296 | 83876021 | ID=MS.gene80187.t1.exon6;Parent=MS.gene80187.t1 |
| chr3.1 | CDS | 83876021 | 83876296 | 83876021 | ID=cds.MS.gene80187.t1;Parent=MS.gene80187.t1 |
| Gene Sequence |
| Protein sequence |
