Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32700.t1 | XP_003603295.2 | 99.4 | 964 | 6 | 0 | 21 | 984 | 225 | 1188 | 0.00E+00 | 1935.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32700.t1 | Q9LK40 | 70.7 | 976 | 256 | 8 | 21 | 984 | 215 | 1172 | 0.0e+00 | 1401.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32700.t1 | G7J9U6 | 99.4 | 964 | 6 | 0 | 21 | 984 | 225 | 1188 | 0.0e+00 | 1935.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050447 | MS.gene32700 | 0.828705 | 7.75E-55 | -1.69E-46 |
| MS.gene050448 | MS.gene32700 | 0.83766 | 4.56E-57 | -1.69E-46 |
| MS.gene056228 | MS.gene32700 | 0.825097 | 5.64E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32700 | MS.gene42606 | PPI |
| MS.gene014907 | MS.gene32700 | PPI |
| MS.gene32700 | MS.gene32699 | PPI |
| MS.gene32700 | MS.gene27025 | PPI |
| MS.gene023227 | MS.gene32700 | PPI |
| MS.gene32700 | MS.gene023462 | PPI |
| MS.gene32700 | MS.gene09000 | PPI |
| MS.gene32700 | MS.gene80187 | PPI |
| MS.gene32700 | MS.gene08846 | PPI |
| MS.gene32700 | MS.gene42607 | PPI |
| MS.gene32700 | MS.gene09247 | PPI |
| MS.gene32700 | MS.gene90747 | PPI |
| MS.gene35217 | MS.gene32700 | PPI |
| MS.gene08397 | MS.gene32700 | PPI |
| MS.gene32700 | MS.gene24205 | PPI |
| MS.gene028236 | MS.gene32700 | PPI |
| MS.gene32700 | MS.gene42612 | PPI |
| MS.gene80187 | MS.gene32700 | PPI |
| MS.gene80189 | MS.gene32700 | PPI |
| MS.gene32700 | MS.gene27287 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32700.t1 | MTR_3g105990 | 99.378 | 964 | 6 | 0 | 21 | 984 | 225 | 1188 | 0.0 | 1993 |
| MS.gene32700.t1 | MTR_0189s0050 | 97.627 | 295 | 7 | 0 | 21 | 315 | 223 | 517 | 0.0 | 602 |
| MS.gene32700.t1 | MTR_1g023500 | 36.283 | 1017 | 558 | 23 | 21 | 982 | 201 | 1182 | 0.0 | 582 |
| MS.gene32700.t1 | MTR_8g023445 | 31.213 | 1006 | 580 | 26 | 43 | 982 | 1041 | 2000 | 3.11e-125 | 420 |
| MS.gene32700.t1 | MTR_4g124030 | 28.644 | 988 | 565 | 34 | 83 | 980 | 242 | 1179 | 2.35e-89 | 310 |
| MS.gene32700.t1 | MTR_0002s0510 | 25.355 | 422 | 268 | 8 | 534 | 913 | 653 | 1069 | 3.80e-30 | 130 |
| MS.gene32700.t1 | MTR_4g051130 | 25.221 | 452 | 265 | 12 | 570 | 977 | 618 | 1040 | 2.63e-28 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32700.t1 | AT3G23780 | 70.697 | 976 | 256 | 8 | 21 | 984 | 215 | 1172 | 0.0 | 1415 |
| MS.gene32700.t1 | AT3G23780 | 70.697 | 976 | 256 | 8 | 21 | 984 | 215 | 1172 | 0.0 | 1415 |
| MS.gene32700.t1 | AT3G18090 | 70.317 | 977 | 259 | 8 | 21 | 984 | 97 | 1055 | 0.0 | 1412 |
| MS.gene32700.t1 | AT3G18090 | 67.445 | 814 | 234 | 8 | 21 | 821 | 97 | 892 | 0.0 | 1118 |
| MS.gene32700.t1 | AT3G18090 | 67.571 | 811 | 232 | 8 | 21 | 818 | 97 | 889 | 0.0 | 1116 |
| MS.gene32700.t1 | AT4G21710 | 36.578 | 1017 | 555 | 23 | 21 | 982 | 198 | 1179 | 0.0 | 575 |
| MS.gene32700.t1 | AT5G45140 | 31.787 | 1013 | 593 | 27 | 16 | 975 | 185 | 1152 | 3.32e-131 | 425 |
| MS.gene32700.t1 | AT5G45140 | 31.787 | 1013 | 593 | 27 | 16 | 975 | 185 | 1152 | 3.32e-131 | 425 |
| MS.gene32700.t1 | AT1G29940 | 27.365 | 983 | 582 | 28 | 83 | 980 | 234 | 1169 | 2.14e-83 | 293 |
| MS.gene32700.t1 | AT5G45140 | 29.421 | 639 | 387 | 19 | 16 | 623 | 185 | 790 | 5.86e-57 | 212 |
| MS.gene32700.t1 | ATCG00190 | 24.945 | 457 | 285 | 12 | 520 | 931 | 584 | 1027 | 1.65e-27 | 120 |
Find 241 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAAGACATTGTTAATTT+TGG | 0.067293 | 3.1:-83820962 | MS.gene32700:CDS |
| AAAGCATCGACTCTTATATT+TGG | 0.162091 | 3.1:+83821268 | None:intergenic |
| CTTGATATGTCATTCTTATT+AGG | 0.167440 | 3.1:-83821397 | MS.gene32700:CDS |
| GGTCCGATCGCTGATATTTA+TGG | 0.227588 | 3.1:-83819570 | MS.gene32700:CDS |
| TGTCGGGTCAGCGGGTGAAC+TGG | 0.228681 | 3.1:+83819482 | None:intergenic |
| AAATAGGATGGTTGTTAAAT+TGG | 0.238146 | 3.1:-83824217 | MS.gene32700:CDS |
| CCAAAGTCTGAATTCTATAA+TGG | 0.247666 | 3.1:-83821148 | MS.gene32700:CDS |
| TTGAAGTCCTCTTCTTCTTC+AGG | 0.252661 | 3.1:+83821490 | None:intergenic |
| AGTAATCTGCTCAAGATTAA+AGG | 0.253696 | 3.1:-83821577 | MS.gene32700:CDS |
| GCTCTGCAGAGAGACCTTTA+TGG | 0.256867 | 3.1:-83823682 | MS.gene32700:CDS |
| TTGGAGACCATTTGTAATAA+TGG | 0.265166 | 3.1:+83823618 | None:intergenic |
| GGAAAGATACAGAGTAAAAT+TGG | 0.269746 | 3.1:-83820941 | MS.gene32700:CDS |
| AAAAGGATGGAAAGGATTTC+TGG | 0.273074 | 3.1:-83823559 | MS.gene32700:CDS |
| GCATGGACAGAAGGGTGTTT+TGG | 0.274857 | 3.1:-83820423 | MS.gene32700:CDS |
| CAAAGCTGAAATTGAGAATA+AGG | 0.300709 | 3.1:-83821008 | MS.gene32700:CDS |
| TCTGGCGTGGTTGCAACTCT+TGG | 0.301923 | 3.1:-83823541 | MS.gene32700:CDS |
| TTCTTAGAGGAACGTGTAAA+AGG | 0.305968 | 3.1:-83823955 | MS.gene32700:CDS |
| GGGTTTCAAATATTCCATAC+TGG | 0.306856 | 3.1:-83824269 | MS.gene32700:CDS |
| CTCCAGTAGAAAACGCTCTT+TGG | 0.314169 | 3.1:+83823599 | None:intergenic |
| TGATGATACTACAACTGTTC+TGG | 0.316293 | 3.1:-83822617 | MS.gene32700:CDS |
| TAGCCTGAGAAGAATGCTTC+TGG | 0.321084 | 3.1:+83821311 | None:intergenic |
| GACAATAACTTTGCTCCATA+TGG | 0.333966 | 3.1:+83819203 | None:intergenic |
| TGAGTTGGCTGGTGAGCTGC+TGG | 0.335127 | 3.1:-83823755 | MS.gene32700:CDS |
| CGATTTGGAGGTATCAAGTT+TGG | 0.336084 | 3.1:-83819440 | MS.gene32700:CDS |
| TAAATCTTTCCAGTCCCTAT+TGG | 0.337687 | 3.1:-83821539 | MS.gene32700:CDS |
| CTTGGAAAACCTGGATATCT+TGG | 0.343060 | 3.1:-83821187 | MS.gene32700:CDS |
| TGTGCTTTAGCTTTATACTA+TGG | 0.343766 | 3.1:+83820819 | None:intergenic |
| CTGAAGCACCATGAGCTATC+AGG | 0.344112 | 3.1:+83819399 | None:intergenic |
| CCAAAATTAACAATGTCTTC+AGG | 0.345264 | 3.1:+83820962 | None:intergenic |
| AAGCATTCTTCTCAGGCTAT+TGG | 0.349703 | 3.1:-83821307 | MS.gene32700:CDS |
| CAGGTTAGGAGCCCAGTTCT+TGG | 0.351963 | 3.1:-83820464 | MS.gene32700:CDS |
| AGTCGCAGATGAAGAGAAAT+AGG | 0.352580 | 3.1:-83824233 | MS.gene32700:CDS |
| CTCCAACCCAGTCCCCATTT+AGG | 0.352720 | 3.1:+83822575 | None:intergenic |
| TAGCTCTGCCACAAATGATA+TGG | 0.355404 | 3.1:+83822540 | None:intergenic |
| CCATTACTGACCAGCTTCAT+AGG | 0.355712 | 3.1:-83820211 | MS.gene32700:intron |
| ATTGTTGATCTCATCGATTA+TGG | 0.355906 | 3.1:-83824075 | MS.gene32700:CDS |
| TGTGGATTTATAACAATATC+AGG | 0.355965 | 3.1:+83820350 | None:intergenic |
| TTCCAGTCCCTATTGGATAA+TGG | 0.357748 | 3.1:-83821532 | MS.gene32700:CDS |
| AAGCATCGACTCTTATATTT+GGG | 0.358815 | 3.1:+83821269 | None:intergenic |
| CCTGAATTTGACTTTGTCTT+CGG | 0.358897 | 3.1:+83819514 | None:intergenic |
| ATCGAACAGCTGAGGAAGTA+TGG | 0.360028 | 3.1:+83822660 | None:intergenic |
| GATGATGGCTTTCCATTTGT+TGG | 0.362742 | 3.1:-83820899 | MS.gene32700:CDS |
| ATCGGGCGGTGTGCTGATTC+CGG | 0.370475 | 3.1:-83820848 | MS.gene32700:CDS |
| CAATCACGCCATTATCCAAT+AGG | 0.374576 | 3.1:+83821524 | None:intergenic |
| TGCAAATTTGCTCCAACAAA+TGG | 0.379930 | 3.1:+83820887 | None:intergenic |
| GAGAACTTATCTCCAAGAAC+TGG | 0.386193 | 3.1:+83820452 | None:intergenic |
| CCGAAGACAAAGTCAAATTC+AGG | 0.388621 | 3.1:-83819514 | MS.gene32700:CDS |
| TGTTCAGATCTGAGCATATA+AGG | 0.389042 | 3.1:-83821036 | MS.gene32700:CDS |
| CGGACATGTGGTGCAGTCTC+TGG | 0.392560 | 3.1:+83819534 | None:intergenic |
| GTGATCTTGCGACCGGTATC+TGG | 0.396475 | 3.1:-83819296 | MS.gene32700:CDS |
| GTCGCTGACAGGAAGCGATT+TGG | 0.397585 | 3.1:-83819455 | MS.gene32700:CDS |
| CTGGCGTGGTTGCAACTCTT+GGG | 0.400314 | 3.1:-83823540 | MS.gene32700:CDS |
| TTCAGATTCCATATCATTTG+TGG | 0.401910 | 3.1:-83822548 | MS.gene32700:CDS |
| ACCCTTCTGTCCATGCATAC+TGG | 0.403623 | 3.1:+83820430 | None:intergenic |
| TGGGGTGTTCAGTATTTGTT+TGG | 0.404123 | 3.1:-83821460 | MS.gene32700:CDS |
| TTGAAAGCAACAGCCCAGTA+TGG | 0.411906 | 3.1:+83824255 | None:intergenic |
| TTCCTCAGCTGTTCGATTGT+GGG | 0.413594 | 3.1:-83822654 | MS.gene32700:CDS |
| AGAGGACTTCAAGACTGCTT+GGG | 0.413762 | 3.1:-83821479 | MS.gene32700:CDS |
| CAAAGTCTGAATTCTATAAT+GGG | 0.419058 | 3.1:-83821147 | MS.gene32700:CDS |
| TGCTGTTGTTTCGCTGAGAC+AGG | 0.424938 | 3.1:-83820738 | MS.gene32700:intron |
| TTTGGGATTTCTGGAGTCTC+AGG | 0.425430 | 3.1:-83820405 | MS.gene32700:CDS |
| TTTCCTTCGCGACAAACTCC+TGG | 0.425956 | 3.1:-83820323 | MS.gene32700:CDS |
| GTTGCAGGCATCCTTCTCAC+TGG | 0.426530 | 3.1:-83822780 | MS.gene32700:intron |
| GGTCAGCGGGTGAACTGGGC+CGG | 0.426662 | 3.1:+83819487 | None:intergenic |
| TCCTGTCAGCGACAGGCTGT+CGG | 0.428603 | 3.1:+83819465 | None:intergenic |
| GTCCGATCGCTGATATTTAT+GGG | 0.428946 | 3.1:-83819569 | MS.gene32700:CDS |
| GTCGGGTCAGCGGGTGAACT+GGG | 0.429792 | 3.1:+83819483 | None:intergenic |
| AAGGATTCTCCGTCCACTCT+TGG | 0.429803 | 3.1:-83821605 | MS.gene32700:CDS |
| CTTCCTCAGCTGTTCGATTG+TGG | 0.430430 | 3.1:-83822655 | MS.gene32700:CDS |
| AAATATTTCTGAAGAGACTC+TGG | 0.434667 | 3.1:-83824290 | MS.gene32700:CDS |
| GCATCCTTCTCACTGGGGTA+AGG | 0.434903 | 3.1:-83822773 | MS.gene32700:CDS |
| GAGAAGAATGCTTCTGGGAT+TGG | 0.435150 | 3.1:+83821317 | None:intergenic |
| ACAACTACTAGAGGCTGCTT+TGG | 0.435996 | 3.1:-83820300 | MS.gene32700:CDS |
| GACGCTTCCATTATTACAAA+TGG | 0.436306 | 3.1:-83823625 | MS.gene32700:CDS |
| AATTCAGCCATGGTTTGTAA+TGG | 0.438058 | 3.1:+83823508 | None:intergenic |
| GTTCTTCTACTAGCATATAC+TGG | 0.438779 | 3.1:-83823823 | MS.gene32700:CDS |
| GAACTTCTCGTTCTCCATAA+AGG | 0.446635 | 3.1:+83823668 | None:intergenic |
| CGAAAGGGGTTATGTTCAAA+AGG | 0.455941 | 3.1:-83820795 | MS.gene32700:CDS |
| TCGGGCGGTGTGCTGATTCC+GGG | 0.456470 | 3.1:-83820847 | MS.gene32700:CDS |
| CAACTACTAGAGGCTGCTTT+GGG | 0.457722 | 3.1:-83820299 | MS.gene32700:CDS |
| CCTGTCAGCGACAGGCTGTC+GGG | 0.459295 | 3.1:+83819466 | None:intergenic |
| AGCCATGGTTTGTAATGGAT+TGG | 0.460916 | 3.1:+83823513 | None:intergenic |
| CTAGAGGCTGCTTTGGGAAA+GGG | 0.461237 | 3.1:-83820293 | MS.gene32700:CDS |
| TTCAGTACACAGGAAAGGTC+GGG | 0.465796 | 3.1:-83823465 | MS.gene32700:CDS |
| CGACAGGCTGTCGGGTCAGC+GGG | 0.468169 | 3.1:+83819474 | None:intergenic |
| AAGAGGACTTCAAGACTGCT+TGG | 0.469345 | 3.1:-83821480 | MS.gene32700:CDS |
| GATGATACTACAACTGTTCT+GGG | 0.472067 | 3.1:-83822616 | MS.gene32700:CDS |
| GCAGTCTCTGGTAGAATGTT+GGG | 0.473075 | 3.1:+83819546 | None:intergenic |
| TGCAGTCTCTGGTAGAATGT+TGG | 0.474735 | 3.1:+83819545 | None:intergenic |
| CAGTATTTGTTTGGCAAAGA+GGG | 0.476056 | 3.1:-83821451 | MS.gene32700:CDS |
| CGAGTATACAACGGAAGGAC+CGG | 0.476500 | 3.1:-83819599 | MS.gene32700:CDS |
| GAGGAATGAGTTGCCTCATC+AGG | 0.478810 | 3.1:-83822503 | MS.gene32700:intron |
| GACACATCCTTTCAAAAGGA+TGG | 0.483147 | 3.1:-83823572 | MS.gene32700:CDS |
| TGGAGCAAAGTTATTGTCTC+AGG | 0.484390 | 3.1:-83819198 | MS.gene32700:CDS |
| CCATTATAGAATTCAGACTT+TGG | 0.484719 | 3.1:+83821148 | None:intergenic |
| CTTGGACACATCCTTTCAAA+AGG | 0.485028 | 3.1:-83823576 | MS.gene32700:CDS |
| TTACTCTGACCAAGATATCC+AGG | 0.485264 | 3.1:+83821178 | None:intergenic |
| GCAGCCTCTAGTAGTTGTCC+AGG | 0.486041 | 3.1:+83820305 | None:intergenic |
| GTCTGAAAGAGTGGTCTTTG+TGG | 0.490054 | 3.1:+83821226 | None:intergenic |
| CACATTTATCGTCTGCCTCA+CGG | 0.490360 | 3.1:+83824010 | None:intergenic |
| ATCCCAGAAGCATTCTTCTC+AGG | 0.490953 | 3.1:-83821314 | MS.gene32700:CDS |
| CGCCATTATCCAATAGGGAC+TGG | 0.492490 | 3.1:+83821530 | None:intergenic |
| TGTTCTTCTTAATTCAGCCA+TGG | 0.493474 | 3.1:+83823498 | None:intergenic |
| TAGGATGGTTGTTAAATTGG+TGG | 0.495089 | 3.1:-83824214 | MS.gene32700:CDS |
| CAAAGTGGTGATATTATCAT+CGG | 0.496605 | 3.1:-83820866 | MS.gene32700:CDS |
| TTGCAGGCATCCTTCTCACT+GGG | 0.496735 | 3.1:-83822779 | MS.gene32700:intron |
| CCCGACAGCCTGTCGCTGAC+AGG | 0.497438 | 3.1:-83819466 | MS.gene32700:CDS |
| AATCGCTTCCTGTCAGCGAC+AGG | 0.499397 | 3.1:+83819458 | None:intergenic |
| AACAAGAGGCTTGAGTTGGC+TGG | 0.508096 | 3.1:-83823766 | MS.gene32700:CDS |
| AGTAGGGACCTCGAATCTTC+CGG | 0.508469 | 3.1:+83819270 | None:intergenic |
| AGGTATCAAGTTTGGTGAGA+TGG | 0.508789 | 3.1:-83819432 | MS.gene32700:CDS |
| AATGGCTTCAACAGAGGAAG+TGG | 0.510195 | 3.1:+83820229 | None:intergenic |
| ATCTTCCGGCCACCAGATAC+CGG | 0.512174 | 3.1:+83819284 | None:intergenic |
| GCATGGTCATGATTTGCAAA+TGG | 0.512791 | 3.1:+83821355 | None:intergenic |
| ATCCTTTCAAAAGGATGGAA+AGG | 0.513262 | 3.1:-83823567 | MS.gene32700:CDS |
| TTGCAAATCATGACCATGCT+AGG | 0.514874 | 3.1:-83821351 | MS.gene32700:CDS |
| CTCCAGTATGCATGGACAGA+AGG | 0.515563 | 3.1:-83820432 | MS.gene32700:CDS |
| AATCACGCCATTATCCAATA+GGG | 0.516901 | 3.1:+83821525 | None:intergenic |
| ACTAGAGGCTGCTTTGGGAA+AGG | 0.518204 | 3.1:-83820294 | MS.gene32700:CDS |
| GGAAAGGGCATCGCTTGTGT+TGG | 0.523598 | 3.1:-83820278 | MS.gene32700:CDS |
| GGTTTCAAATATTCCATACT+GGG | 0.525085 | 3.1:-83824268 | MS.gene32700:CDS |
| ATATAATCAAGAAGATTCCT+TGG | 0.528881 | 3.1:-83821089 | MS.gene32700:CDS |
| GTCTCAGGAGCTGTTCAGCA+TGG | 0.529733 | 3.1:-83819183 | MS.gene32700:CDS |
| AAAGCTAAAGCACACCGAAA+GGG | 0.531794 | 3.1:-83820810 | MS.gene32700:CDS |
| TCAACAGAGGAAGTGGAGAA+AGG | 0.532899 | 3.1:+83820236 | None:intergenic |
| AGCCTGAGAAGAATGCTTCT+GGG | 0.535263 | 3.1:+83821312 | None:intergenic |
| CCTATGAAGCTGGTCAGTAA+TGG | 0.535807 | 3.1:+83820211 | None:intergenic |
| TCGAAACAAGAGGCTTGAGT+TGG | 0.536571 | 3.1:-83823770 | MS.gene32700:CDS |
| AATATTTCTGAAGAGACTCT+GGG | 0.543313 | 3.1:-83824289 | MS.gene32700:CDS |
| TCTGATTGTCTTGGAAAACC+TGG | 0.545916 | 3.1:-83821196 | MS.gene32700:CDS |
| TGCGACCGGTATCTGGTGGC+CGG | 0.547112 | 3.1:-83819289 | MS.gene32700:CDS |
| TTCCTAAATGGGGACTGGGT+TGG | 0.547112 | 3.1:-83822577 | MS.gene32700:CDS |
| GTTGATAGCCTTGATGATGA+TGG | 0.547320 | 3.1:-83820914 | MS.gene32700:CDS |
| ATGGTTGTTAAATTGGTGGA+AGG | 0.549390 | 3.1:-83824210 | MS.gene32700:CDS |
| TAAATGTGAAGCATTTCGTA+GGG | 0.550339 | 3.1:-83823995 | MS.gene32700:CDS |
| CTTTATACTATGGTCCGTCC+CGG | 0.551918 | 3.1:+83820829 | None:intergenic |
| CTTTGCTCCATATGGAACAC+TGG | 0.552473 | 3.1:+83819211 | None:intergenic |
| AATGGCGTGATTGAGCTGAT+TGG | 0.554573 | 3.1:-83821514 | MS.gene32700:CDS |
| TGGAAGATTACCTATGAAGC+TGG | 0.555512 | 3.1:+83820201 | None:intergenic |
| TGCTAGGAAGCGGATGGGGA+AGG | 0.555662 | 3.1:-83823704 | MS.gene32700:CDS |
| GGCAAGGTATCTAGCTTACA+TGG | 0.555841 | 3.1:-83823851 | MS.gene32700:CDS |
| ATCGATTATGGAGAGGCAGA+TGG | 0.558185 | 3.1:-83824063 | MS.gene32700:CDS |
| GTGCGCATATTATCTGATGC+AGG | 0.558870 | 3.1:-83821628 | MS.gene32700:CDS |
| AAGTGCACTTTGCACATGCT+AGG | 0.559850 | 3.1:-83823720 | MS.gene32700:CDS |
| TTGGTGGAAGGTTCGACGGA+GGG | 0.559939 | 3.1:-83824198 | MS.gene32700:CDS |
| CAACGGAAGGACCGGTGAGA+TGG | 0.562507 | 3.1:-83819591 | MS.gene32700:CDS |
| GTGGTGGCCAGTGTTCCATA+TGG | 0.562685 | 3.1:-83819218 | MS.gene32700:CDS |
| TGGTGAGCTGCTGGAGCGCG+AGG | 0.563454 | 3.1:-83823746 | MS.gene32700:CDS |
| GCTGACAGGAAGCGATTTGG+AGG | 0.563584 | 3.1:-83819452 | MS.gene32700:CDS |
| GATTGGTCCTGAAGAAGAAG+AGG | 0.564149 | 3.1:-83821497 | MS.gene32700:CDS |
| TCAGTATTTGTTTGGCAAAG+AGG | 0.564795 | 3.1:-83821452 | MS.gene32700:CDS |
| TGCACATGCTAGGAAGCGGA+TGG | 0.566345 | 3.1:-83823710 | MS.gene32700:CDS |
| GCGACAGGCTGTCGGGTCAG+CGG | 0.566910 | 3.1:+83819473 | None:intergenic |
| TCTGGTGGCCGGAAGATTCG+AGG | 0.567048 | 3.1:-83819278 | MS.gene32700:CDS |
| CACTCGTCAATAGATTCTGC+GGG | 0.567248 | 3.1:+83823919 | None:intergenic |
| GATGTCATTGTCTGAAAGAG+TGG | 0.567955 | 3.1:+83821217 | None:intergenic |
| TGTCTGTCGAGATACCTGTA+TGG | 0.568259 | 3.1:-83824137 | MS.gene32700:CDS |
| CACATGCTAGGAAGCGGATG+GGG | 0.569157 | 3.1:-83823708 | MS.gene32700:CDS |
| TAAAGCTAAAGCACACCGAA+AGG | 0.569174 | 3.1:-83820811 | MS.gene32700:CDS |
| GTTCAGTACACAGGAAAGGT+CGG | 0.569216 | 3.1:-83823466 | MS.gene32700:CDS |
| AAGCTAAAGCACACCGAAAG+GGG | 0.569664 | 3.1:-83820809 | MS.gene32700:CDS |
| AATTTCCCCTTCACAAAACA+AGG | 0.569701 | 3.1:-83820380 | MS.gene32700:CDS |
| CATCGGCTGATTCACAGAAA+CGG | 0.571228 | 3.1:+83819246 | None:intergenic |
| GTCAGTAATGGCTTCAACAG+AGG | 0.571703 | 3.1:+83820223 | None:intergenic |
| CAGCGATCGGACCATCTCAC+CGG | 0.571876 | 3.1:+83819580 | None:intergenic |
| GATAAGTTCTCCAGTATGCA+TGG | 0.571930 | 3.1:-83820440 | MS.gene32700:CDS |
| TAAATTGGTGGAAGGTTCGA+CGG | 0.574279 | 3.1:-83824202 | MS.gene32700:CDS |
| TCTCAGGAGCTGTTCAGCAT+GGG | 0.574908 | 3.1:-83819182 | MS.gene32700:CDS |
| ATGGAAAGCCATCATCATCA+AGG | 0.577034 | 3.1:+83820906 | None:intergenic |
| ACTGGCCACCACAATGTCAT+CGG | 0.577833 | 3.1:+83819229 | None:intergenic |
| ACCCCAGATGGTGAAAATTG+TGG | 0.578472 | 3.1:-83822736 | MS.gene32700:CDS |
| GCACATGCTAGGAAGCGGAT+GGG | 0.578542 | 3.1:-83823709 | MS.gene32700:CDS |
| TCAGCTGTTCGATTGTGGGA+TGG | 0.579309 | 3.1:-83822650 | MS.gene32700:CDS |
| ATAAATGTGAAGCATTTCGT+AGG | 0.579430 | 3.1:-83823996 | MS.gene32700:CDS |
| CATCATCAAGGCTATCAACT+CGG | 0.579816 | 3.1:+83820918 | None:intergenic |
| ACAATGACATCTGATTGTCT+TGG | 0.579927 | 3.1:-83821205 | MS.gene32700:CDS |
| TCCAGTATGCATGGACAGAA+GGG | 0.580759 | 3.1:-83820431 | MS.gene32700:CDS |
| TACCGCGCTGCAACGAAGCA+CGG | 0.580917 | 3.1:+83821059 | None:intergenic |
| GTATCTGAGACGAATCACTC+AGG | 0.581128 | 3.1:+83819351 | None:intergenic |
| AACCAATCCATTACAAACCA+TGG | 0.584723 | 3.1:-83823515 | MS.gene32700:CDS |
| ACGAATCACTCAGGGTGAAG+AGG | 0.588585 | 3.1:+83819360 | None:intergenic |
| GTATCTAGCTTACATGGTGA+AGG | 0.589191 | 3.1:-83823845 | MS.gene32700:CDS |
| GGCCCATAAATATCAGCGAT+CGG | 0.593035 | 3.1:+83819567 | None:intergenic |
| TGTCCAGGAGTTTGTCGCGA+AGG | 0.593618 | 3.1:+83820320 | None:intergenic |
| GTCTTTGTGGATAAAACAGT+TGG | 0.594545 | 3.1:+83821239 | None:intergenic |
| TGATTCACAGAAACGGCAGT+AGG | 0.595950 | 3.1:+83819253 | None:intergenic |
| GATGGAAAGGATTTCTGGCG+TGG | 0.598035 | 3.1:-83823554 | MS.gene32700:CDS |
| GAGGACTTCAAGACTGCTTG+GGG | 0.598252 | 3.1:-83821478 | MS.gene32700:CDS |
| AAAGTGGTGATATTATCATC+GGG | 0.600046 | 3.1:-83820865 | MS.gene32700:CDS |
| TACTAACAACCAAGAGTGGA+CGG | 0.601761 | 3.1:+83821596 | None:intergenic |
| GCACTCGTCAATAGATTCTG+CGG | 0.603702 | 3.1:+83823918 | None:intergenic |
| TTTATCGTCTGCCTCACGGA+TGG | 0.604454 | 3.1:+83824014 | None:intergenic |
| GATTAAAAGTGAACCTGATG+AGG | 0.605290 | 3.1:+83822490 | None:intergenic |
| TCGACGGAGGGAATTACAAA+CGG | 0.607790 | 3.1:-83824186 | MS.gene32700:CDS |
| TGACTTTGTCTTCGGACATG+TGG | 0.610967 | 3.1:+83819522 | None:intergenic |
| AGAACTTATCTCCAAGAACT+GGG | 0.614017 | 3.1:+83820453 | None:intergenic |
| GTGCTGTCTTCGAATGATGA+GGG | 0.614672 | 3.1:-83820770 | MS.gene32700:CDS |
| CGTGATTGCCTGATAGCTCA+TGG | 0.615327 | 3.1:-83819407 | MS.gene32700:CDS |
| ACTTTGCACATGCTAGGAAG+CGG | 0.619524 | 3.1:-83823714 | MS.gene32700:CDS |
| CAAACCTTACCCCAGTGAGA+AGG | 0.623788 | 3.1:+83822769 | None:intergenic |
| GATTCACAGAAACGGCAGTA+GGG | 0.625924 | 3.1:+83819254 | None:intergenic |
| TGCAAATGTGATCTTGCGAC+CGG | 0.628861 | 3.1:-83819303 | MS.gene32700:CDS |
| GGTACAACACTCTCCTAGCA+TGG | 0.629214 | 3.1:+83821338 | None:intergenic |
| TAATGGGCAGAATGCAATTG+TGG | 0.631335 | 3.1:-83821131 | MS.gene32700:CDS |
| AACTCCTGGACAACTACTAG+AGG | 0.636159 | 3.1:-83820309 | MS.gene32700:CDS |
| TCGTCAATAGATTCTGCGGG+TGG | 0.637226 | 3.1:+83823922 | None:intergenic |
| GCATATTATCTGATGCAGGA+AGG | 0.637268 | 3.1:-83821624 | MS.gene32700:CDS |
| TCAGTACACAGGAAAGGTCG+GGG | 0.637306 | 3.1:-83823464 | MS.gene32700:CDS |
| GCGGTGTGCTGATTCCGGGA+CGG | 0.638296 | 3.1:-83820843 | MS.gene32700:CDS |
| AAAGTCAAATTCAGGAACAC+CGG | 0.640672 | 3.1:-83819506 | MS.gene32700:CDS |
| ATCCCACAATCGAACAGCTG+AGG | 0.642137 | 3.1:+83822652 | None:intergenic |
| ACGAACGAGTATACAACGGA+AGG | 0.643362 | 3.1:-83819604 | MS.gene32700:CDS |
| GCAGATGAAGAGAAATAGGA+TGG | 0.645163 | 3.1:-83824229 | MS.gene32700:CDS |
| ATCGGTACTTACTACTCCTG+TGG | 0.646742 | 3.1:+83822693 | None:intergenic |
| AAGTATGGATTCAGTTACAT+CGG | 0.648107 | 3.1:+83822675 | None:intergenic |
| GTGGCTGTCAATGTGCATCT+CGG | 0.649101 | 3.1:-83821112 | MS.gene32700:CDS |
| TGATCTCATCGATTATGGAG+AGG | 0.650177 | 3.1:-83824070 | MS.gene32700:CDS |
| ACAAGTTCAGTACACAGGAA+AGG | 0.656004 | 3.1:-83823470 | MS.gene32700:CDS |
| CGAAGCACGGTTCATAACCA+AGG | 0.659189 | 3.1:+83821072 | None:intergenic |
| TGTGCTGTCTTCGAATGATG+AGG | 0.662109 | 3.1:-83820771 | MS.gene32700:CDS |
| TGAATCAGCCGATGACATTG+TGG | 0.662510 | 3.1:-83819237 | MS.gene32700:CDS |
| CAGAGCTACGAACTAGAAGA+CGG | 0.663373 | 3.1:-83822525 | MS.gene32700:CDS |
| TGTCGCGAAGGAAATGCATG+TGG | 0.663756 | 3.1:+83820332 | None:intergenic |
| ATGATACTACAACTGTTCTG+GGG | 0.665902 | 3.1:-83822615 | MS.gene32700:CDS |
| TATCTGAGACGAATCACTCA+GGG | 0.666324 | 3.1:+83819352 | None:intergenic |
| ATTGGTGGAAGGTTCGACGG+AGG | 0.669687 | 3.1:-83824199 | MS.gene32700:CDS |
| TGCTGTCTTCGAATGATGAG+GGG | 0.676097 | 3.1:-83820769 | MS.gene32700:CDS |
| AGATTACTAACAACCAAGAG+TGG | 0.676652 | 3.1:+83821592 | None:intergenic |
| AGGCAACAAGTTCAGTACAC+AGG | 0.677661 | 3.1:-83823475 | MS.gene32700:CDS |
| TCGCTTGTGTTGGTTCACTG+AGG | 0.682522 | 3.1:-83820268 | MS.gene32700:CDS |
| TGCAGGCATCCTTCTCACTG+GGG | 0.689696 | 3.1:-83822778 | MS.gene32700:intron |
| GTTGGAGCAAATTTGCAAAG+TGG | 0.689728 | 3.1:-83820881 | MS.gene32700:CDS |
| ATCAGCCGATGACATTGTGG+TGG | 0.700098 | 3.1:-83819234 | MS.gene32700:CDS |
| ATCTTGCGACCGGTATCTGG+TGG | 0.706820 | 3.1:-83819293 | MS.gene32700:CDS |
| AACCGTGCTTCGTTGCAGCG+CGG | 0.708946 | 3.1:-83821061 | MS.gene32700:CDS |
| AAATGTGAAGCATTTCGTAG+GGG | 0.709518 | 3.1:-83823994 | MS.gene32700:CDS |
| TCTCTTTGCATCCATCCGTG+AGG | 0.721646 | 3.1:-83824025 | MS.gene32700:CDS |
| GTGGTGATATTATCATCGGG+CGG | 0.734436 | 3.1:-83820862 | MS.gene32700:CDS |
| TGGCTGAATTAAGAAGAACA+AGG | 0.738169 | 3.1:-83823495 | MS.gene32700:CDS |
| AGCTACGAACTAGAAGACGG+AGG | 0.741616 | 3.1:-83822522 | MS.gene32700:CDS |
| GGGAACGAACGAGTATACAA+CGG | 0.771797 | 3.1:-83819608 | MS.gene32700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATATATATTCAGTTT+TGG | - | chr3.1:83821445-83821464 | MS.gene32700:CDS | 10.0% |
| !! | TAAAACTAAATAAAATTACC+TGG | - | chr3.1:83820273-83820292 | MS.gene32700:CDS | 15.0% |
| !! | TAAATAAGAGATTAATTTAC+AGG | + | chr3.1:83820499-83820518 | None:intergenic | 15.0% |
| !! | TCTTATGGATAAAAAAATTT+GGG | - | chr3.1:83822848-83822867 | MS.gene32700:intron | 15.0% |
| !! | TGTAATGTACAAAATAAATA+GGG | + | chr3.1:83823872-83823891 | None:intergenic | 15.0% |
| !!! | TTTATTTTAATAGAAGCTTA+TGG | - | chr3.1:83820718-83820737 | MS.gene32700:intron | 15.0% |
| !! | AAAAAATTAGATTTCAGTTG+TGG | + | chr3.1:83822980-83822999 | None:intergenic | 20.0% |
| !! | ACAACTTAAAATGAAACTTT+GGG | + | chr3.1:83823827-83823846 | None:intergenic | 20.0% |
| !! | ATGTCTAACATATGATTAAA+TGG | - | chr3.1:83821299-83821318 | MS.gene32700:CDS | 20.0% |
| !! | CATTAAAGGATTAAAAAGAA+AGG | - | chr3.1:83819648-83819667 | MS.gene32700:intron | 20.0% |
| !! | CTAGGATAAAATAATTCTAT+TGG | + | chr3.1:83820139-83820158 | None:intergenic | 20.0% |
| !! | CTGTAATGTACAAAATAAAT+AGG | + | chr3.1:83823873-83823892 | None:intergenic | 20.0% |
| !! | GTCTTATGGATAAAAAAATT+TGG | - | chr3.1:83822847-83822866 | MS.gene32700:intron | 20.0% |
| !! | TAAAGTAAACTAAATCATGA+TGG | + | chr3.1:83823342-83823361 | None:intergenic | 20.0% |
| !! | TAGAAGTTAAAAGTAACTTA+CGG | + | chr3.1:83820093-83820112 | None:intergenic | 20.0% |
| !!! | ATAGTTATGTTTTAAGTATC+TGG | - | chr3.1:83821233-83821252 | MS.gene32700:CDS | 20.0% |
| !!! | ATTGATAGCAATATTATAAG+GGG | + | chr3.1:83820241-83820260 | None:intergenic | 20.0% |
| !!! | CTTTTTAATCCTTTAATGTT+CGG | + | chr3.1:83819646-83819665 | None:intergenic | 20.0% |
| !!! | GATTGATAGCAATATTATAA+GGG | + | chr3.1:83820242-83820261 | None:intergenic | 20.0% |
| !!! | TGATTGATAGCAATATTATA+AGG | + | chr3.1:83820243-83820262 | None:intergenic | 20.0% |
| !!! | TTTTTTAATGAATCTTGAAC+AGG | + | chr3.1:83823398-83823417 | None:intergenic | 20.0% |
| ! | AAATAGGATGGTTGTTAAAT+TGG | - | chr3.1:83819303-83819322 | MS.gene32700:CDS | 25.0% |
| ! | AATAGAGAACAACAAATGAA+AGG | - | chr3.1:83821512-83821531 | MS.gene32700:CDS | 25.0% |
| ! | AGAAGTTAAAAGTAACTTAC+GGG | + | chr3.1:83820092-83820111 | None:intergenic | 25.0% |
| ! | ATAGAGAACAACAAATGAAA+GGG | - | chr3.1:83821513-83821532 | MS.gene32700:CDS | 25.0% |
| ! | ATATAATCAAGAAGATTCCT+TGG | - | chr3.1:83822431-83822450 | MS.gene32700:intron | 25.0% |
| ! | ATCATAATTGAAGTAGTTCT+TGG | + | chr3.1:83822820-83822839 | None:intergenic | 25.0% |
| ! | CAAAGTCTGAATTCTATAAT+GGG | - | chr3.1:83822373-83822392 | MS.gene32700:intron | 25.0% |
| ! | CAAATTTATTGCAATTACTG+TGG | + | chr3.1:83821787-83821806 | None:intergenic | 25.0% |
| ! | CATAATTGGAAACATAACAT+AGG | + | chr3.1:83821697-83821716 | None:intergenic | 25.0% |
| ! | CTTGATATGTCATTCTTATT+AGG | - | chr3.1:83822123-83822142 | MS.gene32700:intron | 25.0% |
| ! | GACAACTTAAAATGAAACTT+TGG | + | chr3.1:83823828-83823847 | None:intergenic | 25.0% |
| ! | TAAACTACTTATACATGTGA+AGG | - | chr3.1:83820215-83820234 | MS.gene32700:CDS | 25.0% |
| ! | TATGATAAAATTTGCAGGTT+AGG | - | chr3.1:83823042-83823061 | MS.gene32700:intron | 25.0% |
| ! | TATTGAGACATGTTATTGTT+AGG | + | chr3.1:83823757-83823776 | None:intergenic | 25.0% |
| ! | TCAACAAGGGAAAAAAAATA+GGG | + | chr3.1:83821754-83821773 | None:intergenic | 25.0% |
| ! | TGTGGATTTATAACAATATC+AGG | + | chr3.1:83823173-83823192 | None:intergenic | 25.0% |
| ! | TGTTGTATGATAAAATTTGC+AGG | - | chr3.1:83823037-83823056 | MS.gene32700:intron | 25.0% |
| ! | TTCAACAAGGGAAAAAAAAT+AGG | + | chr3.1:83821755-83821774 | None:intergenic | 25.0% |
| ! | TTCACATGTATAAGTAGTTT+AGG | + | chr3.1:83820216-83820235 | None:intergenic | 25.0% |
| ! | TTGTGGACTTGTAAAAAATT+TGG | - | chr3.1:83820801-83820820 | MS.gene32700:CDS | 25.0% |
| !! | AAAGACAAAGTTTTCCTAAA+TGG | - | chr3.1:83820931-83820950 | MS.gene32700:CDS | 25.0% |
| !! | AAGACAAAGTTTTCCTAAAT+GGG | - | chr3.1:83820932-83820951 | MS.gene32700:CDS | 25.0% |
| !! | GAATATTTTATTGTAGATCC+AGG | - | chr3.1:83823683-83823702 | MS.gene32700:CDS | 25.0% |
| !! | GTTTACTTTAATTGCAGTTT+TGG | - | chr3.1:83823352-83823371 | MS.gene32700:intron | 25.0% |
| !! | TATGTTTTTCCGAACATTAA+AGG | - | chr3.1:83819634-83819653 | MS.gene32700:intron | 25.0% |
| !! | TGGCATATTATTTTCAACAA+GGG | + | chr3.1:83821767-83821786 | None:intergenic | 25.0% |
| !! | TGGTTACTTGTATTTTATGT+AGG | - | chr3.1:83823372-83823391 | MS.gene32700:intron | 25.0% |
| !! | TTGTTTGAAATTTGCTTTCT+GGG | - | chr3.1:83821340-83821359 | MS.gene32700:CDS | 25.0% |
| !! | TTTGTTTGAAATTTGCTTTC+TGG | - | chr3.1:83821339-83821358 | MS.gene32700:CDS | 25.0% |
| !!! | AGTGCTTTAAAATATGACAA+AGG | + | chr3.1:83821084-83821103 | None:intergenic | 25.0% |
| !!! | TGTTCTCTATTTCTACAAAA+AGG | + | chr3.1:83821503-83821522 | None:intergenic | 25.0% |
| !!! | TTTACTTTAAAACCCAGTTT+GGG | - | chr3.1:83823541-83823560 | MS.gene32700:CDS | 25.0% |
| AAACAGAAATGGTTAACACA+AGG | + | chr3.1:83821837-83821856 | None:intergenic | 30.0% | |
| AAAGTGGTGATATTATCATC+GGG | - | chr3.1:83822655-83822674 | MS.gene32700:CDS | 30.0% | |
| AAATGTGAAAAGAGCAGTAT+TGG | + | chr3.1:83821668-83821687 | None:intergenic | 30.0% | |
| AACTGAACTGAACTTTAAGT+TGG | + | chr3.1:83823523-83823542 | None:intergenic | 30.0% | |
| AAGGATTAAAAAGAAAGGCA+AGG | - | chr3.1:83819653-83819672 | MS.gene32700:intron | 30.0% | |
| AAGTATGGATTCAGTTACAT+CGG | + | chr3.1:83820848-83820867 | None:intergenic | 30.0% | |
| AATTGGAAACATAACATAGG+AGG | + | chr3.1:83821694-83821713 | None:intergenic | 30.0% | |
| AGTAATCTGCTCAAGATTAA+AGG | - | chr3.1:83821943-83821962 | MS.gene32700:intron | 30.0% | |
| CAAAGCTGAAATTGAGAATA+AGG | - | chr3.1:83822512-83822531 | MS.gene32700:CDS | 30.0% | |
| CAAAGTGGTGATATTATCAT+CGG | - | chr3.1:83822654-83822673 | MS.gene32700:CDS | 30.0% | |
| CAATAACATGTCTCAATATG+TGG | - | chr3.1:83823759-83823778 | MS.gene32700:CDS | 30.0% | |
| CCAAAATTAACAATGTCTTC+AGG | + | chr3.1:83822561-83822580 | None:intergenic | 30.0% | |
| CCAAAGTCTGAATTCTATAA+TGG | - | chr3.1:83822372-83822391 | MS.gene32700:intron | 30.0% | |
| CCATTATAGAATTCAGACTT+TGG | + | chr3.1:83822375-83822394 | None:intergenic | 30.0% | |
| GCAAAAAACAATATCCATAC+AGG | + | chr3.1:83819400-83819419 | None:intergenic | 30.0% | |
| GCTTACAAAGTCAACATAAT+TGG | + | chr3.1:83821711-83821730 | None:intergenic | 30.0% | |
| GGAAAGATACAGAGTAAAAT+TGG | - | chr3.1:83822579-83822598 | MS.gene32700:CDS | 30.0% | |
| GGTTTCAAATATTCCATACT+GGG | - | chr3.1:83819252-83819271 | MS.gene32700:CDS | 30.0% | |
| TATAAACCAATCTTTGACAG+AGG | + | chr3.1:83821429-83821448 | None:intergenic | 30.0% | |
| TGTGTTAACCATTTCTGTTT+AGG | - | chr3.1:83821837-83821856 | MS.gene32700:intron | 30.0% | |
| TTATGATGCATCTTGTCTTA+TGG | - | chr3.1:83822833-83822852 | MS.gene32700:intron | 30.0% | |
| TTCAGATTCCATATCATTTG+TGG | - | chr3.1:83820972-83820991 | MS.gene32700:CDS | 30.0% | |
| TTGGAGACCATTTGTAATAA+TGG | + | chr3.1:83819905-83819924 | None:intergenic | 30.0% | |
| ! | AAATATTTCTGAAGAGACTC+TGG | - | chr3.1:83819230-83819249 | MS.gene32700:CDS | 30.0% |
| ! | AATATTTCTGAAGAGACTCT+GGG | - | chr3.1:83819231-83819250 | MS.gene32700:CDS | 30.0% |
| ! | AGACAAAGTTTTCCTAAATG+GGG | - | chr3.1:83820933-83820952 | MS.gene32700:CDS | 30.0% |
| ! | ATAAATGTGAAGCATTTCGT+AGG | - | chr3.1:83819524-83819543 | MS.gene32700:CDS | 30.0% |
| ! | ATTGTTGATCTCATCGATTA+TGG | - | chr3.1:83819445-83819464 | MS.gene32700:CDS | 30.0% |
| ! | CATACAACAGTTTTTCTTAG+CGG | + | chr3.1:83823026-83823045 | None:intergenic | 30.0% |
| ! | CCTGAAGACATTGTTAATTT+TGG | - | chr3.1:83822558-83822577 | MS.gene32700:CDS | 30.0% |
| ! | GTGGCATATTATTTTCAACA+AGG | + | chr3.1:83821768-83821787 | None:intergenic | 30.0% |
| ! | TAAATGTGAAGCATTTCGTA+GGG | - | chr3.1:83819525-83819544 | MS.gene32700:CDS | 30.0% |
| ! | TATTTTGTACATTACAGAGC+TGG | - | chr3.1:83823876-83823895 | MS.gene32700:CDS | 30.0% |
| ! | TCAGTACGTTCTAAATGAAA+TGG | - | chr3.1:83820452-83820471 | MS.gene32700:CDS | 30.0% |
| !! | AAAGCATCGACTCTTATATT+TGG | + | chr3.1:83822255-83822274 | None:intergenic | 30.0% |
| !! | AAGCATCGACTCTTATATTT+GGG | + | chr3.1:83822254-83822273 | None:intergenic | 30.0% |
| !! | GTTTACTTTAAAACCCAGTT+TGG | - | chr3.1:83823540-83823559 | MS.gene32700:CDS | 30.0% |
| !! | GTTTTAAGTATCTGGAAACT+TGG | - | chr3.1:83821241-83821260 | MS.gene32700:CDS | 30.0% |
| !! | TGTGCTTTAGCTTTATACTA+TGG | + | chr3.1:83822704-83822723 | None:intergenic | 30.0% |
| !!! | TGGATATTGTTTTTTGCTCT+TGG | - | chr3.1:83819403-83819422 | MS.gene32700:CDS | 30.0% |
| AAAAGGATGGAAAGGATTTC+TGG | - | chr3.1:83819961-83819980 | MS.gene32700:intron | 35.0% | |
| AAAGTCAAATTCAGGAACAC+CGG | - | chr3.1:83824014-83824033 | MS.gene32700:CDS | 35.0% | |
| AACAACCTTCTTCCACTATA+TGG | + | chr3.1:83821133-83821152 | None:intergenic | 35.0% | |
| AACCAATCCATTACAAACCA+TGG | - | chr3.1:83820005-83820024 | MS.gene32700:intron | 35.0% | |
| AATCACGCCATTATCCAATA+GGG | + | chr3.1:83821998-83822017 | None:intergenic | 35.0% | |
| AATTTCCCCTTCACAAAACA+AGG | - | chr3.1:83823140-83823159 | MS.gene32700:intron | 35.0% | |
| ACAACCTTCTTCCACTATAT+GGG | + | chr3.1:83821132-83821151 | None:intergenic | 35.0% | |
| ACAATGACATCTGATTGTCT+TGG | - | chr3.1:83822315-83822334 | MS.gene32700:intron | 35.0% | |
| ACTGAACTGTGTCAAAAGTT+CGG | + | chr3.1:83823464-83823483 | None:intergenic | 35.0% | |
| AGAACTTATCTCCAAGAACT+GGG | + | chr3.1:83823070-83823089 | None:intergenic | 35.0% | |
| AGATTACTAACAACCAAGAG+TGG | + | chr3.1:83821931-83821950 | None:intergenic | 35.0% | |
| AGCTGATACTGAACATGAAA+TGG | + | chr3.1:83820392-83820411 | None:intergenic | 35.0% | |
| ATCCTTTCAAAAGGATGGAA+AGG | - | chr3.1:83819953-83819972 | MS.gene32700:intron | 35.0% | |
| ATGATACTACAACTGTTCTG+GGG | - | chr3.1:83820905-83820924 | MS.gene32700:CDS | 35.0% | |
| ATGGTTGTTAAATTGGTGGA+AGG | - | chr3.1:83819310-83819329 | MS.gene32700:CDS | 35.0% | |
| ATTGTCTTAGTAGCTTCAGA+TGG | - | chr3.1:83820593-83820612 | MS.gene32700:intron | 35.0% | |
| CACTTACTTTACATGAGTCA+TGG | - | chr3.1:83821100-83821119 | MS.gene32700:CDS | 35.0% | |
| CAGTATTTGTTTGGCAAAGA+GGG | - | chr3.1:83822069-83822088 | MS.gene32700:intron | 35.0% | |
| GACAATAACTTTGCTCCATA+TGG | + | chr3.1:83824320-83824339 | None:intergenic | 35.0% | |
| GACGCTTCCATTATTACAAA+TGG | - | chr3.1:83819895-83819914 | MS.gene32700:intron | 35.0% | |
| GATGATACTACAACTGTTCT+GGG | - | chr3.1:83820904-83820923 | MS.gene32700:CDS | 35.0% | |
| GATTAAAAGTGAACCTGATG+AGG | + | chr3.1:83821033-83821052 | None:intergenic | 35.0% | |
| GATTTCCACCTAAACAGAAA+TGG | + | chr3.1:83821848-83821867 | None:intergenic | 35.0% | |
| GCGCATATTTAACCTTCATT+CGG | + | chr3.1:83820166-83820185 | None:intergenic | 35.0% | |
| GGGTTTCAAATATTCCATAC+TGG | - | chr3.1:83819251-83819270 | MS.gene32700:CDS | 35.0% | |
| GTCTTTGTGGATAAAACAGT+TGG | + | chr3.1:83822284-83822303 | None:intergenic | 35.0% | |
| GTTAACCATTTCTGTTTAGG+TGG | - | chr3.1:83821840-83821859 | MS.gene32700:intron | 35.0% | |
| GTTCTTCTACTAGCATATAC+TGG | - | chr3.1:83819697-83819716 | MS.gene32700:intron | 35.0% | |
| TAAATCTTTCCAGTCCCTAT+TGG | - | chr3.1:83821981-83822000 | MS.gene32700:intron | 35.0% | |
| TAATAGAAGCTTATGGTTGC+AGG | - | chr3.1:83820725-83820744 | MS.gene32700:intron | 35.0% | |
| TACCTGGTCATTAAAACTCA+CGG | - | chr3.1:83820289-83820308 | MS.gene32700:CDS | 35.0% | |
| TAGGATGGTTGTTAAATTGG+TGG | - | chr3.1:83819306-83819325 | MS.gene32700:CDS | 35.0% | |
| TCAGTATTTGTTTGGCAAAG+AGG | - | chr3.1:83822068-83822087 | MS.gene32700:intron | 35.0% | |
| TGAAATGGAAGAAACAGAGA+TGG | + | chr3.1:83820377-83820396 | None:intergenic | 35.0% | |
| TGATGATACTACAACTGTTC+TGG | - | chr3.1:83820903-83820922 | MS.gene32700:CDS | 35.0% | |
| TGGCTGAATTAAGAAGAACA+AGG | - | chr3.1:83820025-83820044 | MS.gene32700:intron | 35.0% | |
| TGTTCAGATCTGAGCATATA+AGG | - | chr3.1:83822484-83822503 | MS.gene32700:intron | 35.0% | |
| TGTTCTTCTTAATTCAGCCA+TGG | + | chr3.1:83820025-83820044 | None:intergenic | 35.0% | |
| TTCTTAGAGGAACGTGTAAA+AGG | - | chr3.1:83819565-83819584 | MS.gene32700:CDS | 35.0% | |
| ! | AAATGTGAAGCATTTCGTAG+GGG | - | chr3.1:83819526-83819545 | MS.gene32700:CDS | 35.0% |
| ! | AATTCAGCCATGGTTTGTAA+TGG | + | chr3.1:83820015-83820034 | None:intergenic | 35.0% |
| ! | ATCCTTTCCATCCTTTTGAA+AGG | + | chr3.1:83819958-83819977 | None:intergenic | 35.0% |
| ! | CAAAAGCTTGAAAGCATGTT+AGG | - | chr3.1:83823661-83823680 | MS.gene32700:CDS | 35.0% |
| ! | CCTGAATTTGACTTTGTCTT+CGG | + | chr3.1:83824009-83824028 | None:intergenic | 35.0% |
| ! | CTAACATGCTTTCAAGCTTT+TGG | + | chr3.1:83823663-83823682 | None:intergenic | 35.0% |
| ! | CTTTTGAACATAACCCCTTT+CGG | + | chr3.1:83822727-83822746 | None:intergenic | 35.0% |
| ! | TGCAAATTTGCTCCAACAAA+TGG | + | chr3.1:83822636-83822655 | None:intergenic | 35.0% |
| !! | TGAACTGAACTTTAAGTTGG+CGG | + | chr3.1:83823520-83823539 | None:intergenic | 35.0% |
| !! | TTCAGGCTCGCTTTAAAAAT+AGG | - | chr3.1:83823793-83823812 | MS.gene32700:CDS | 35.0% |
| !!! | AACAATGCCTTGTTTTGTGA+AGG | + | chr3.1:83823150-83823169 | None:intergenic | 35.0% |
| !!! | ACAATGCCTTGTTTTGTGAA+GGG | + | chr3.1:83823149-83823168 | None:intergenic | 35.0% |
| AAAGCTAAAGCACACCGAAA+GGG | - | chr3.1:83822710-83822729 | MS.gene32700:CDS | 40.0% | |
| AAGCATTCTTCTCAGGCTAT+TGG | - | chr3.1:83822213-83822232 | MS.gene32700:intron | 40.0% | |
| ACAAGTTCAGTACACAGGAA+AGG | - | chr3.1:83820050-83820069 | MS.gene32700:intron | 40.0% | |
| ACGCTAGCACTATTAAGCAT+CGG | + | chr3.1:83823589-83823608 | None:intergenic | 40.0% | |
| AGATCAATCCCTGAAAAGGT+TGG | + | chr3.1:83820563-83820582 | None:intergenic | 40.0% | |
| AGATGGCCACCATAAAAACT+CGG | + | chr3.1:83820360-83820379 | None:intergenic | 40.0% | |
| AGCGGTCAAATACAACTTAG+AGG | + | chr3.1:83823008-83823027 | None:intergenic | 40.0% | |
| AGGTAGTGTACATAGAGACA+TGG | + | chr3.1:83821375-83821394 | None:intergenic | 40.0% | |
| AGTCGCAGATGAAGAGAAAT+AGG | - | chr3.1:83819287-83819306 | MS.gene32700:CDS | 40.0% | |
| ATGGAAAGCCATCATCATCA+AGG | + | chr3.1:83822617-83822636 | None:intergenic | 40.0% | |
| CAATCACGCCATTATCCAAT+AGG | + | chr3.1:83821999-83822018 | None:intergenic | 40.0% | |
| CACTTCACTATTCTAGTGCA+AGG | + | chr3.1:83821619-83821638 | None:intergenic | 40.0% | |
| CATCATCAAGGCTATCAACT+CGG | + | chr3.1:83822605-83822624 | None:intergenic | 40.0% | |
| CATTTACATCCCCTCAATGA+AGG | + | chr3.1:83820426-83820445 | None:intergenic | 40.0% | |
| CCGAAGACAAAGTCAAATTC+AGG | - | chr3.1:83824006-83824025 | MS.gene32700:CDS | 40.0% | |
| CCGTCGAAAAACTGATAACA+GGG | - | chr3.1:83819720-83819739 | MS.gene32700:intron | 40.0% | |
| CGAAAGGGGTTATGTTCAAA+AGG | - | chr3.1:83822725-83822744 | MS.gene32700:CDS | 40.0% | |
| CTTGGAAAACCTGGATATCT+TGG | - | chr3.1:83822333-83822352 | MS.gene32700:intron | 40.0% | |
| CTTGGACACATCCTTTCAAA+AGG | - | chr3.1:83819944-83819963 | MS.gene32700:intron | 40.0% | |
| GAACTTCTCGTTCTCCATAA+AGG | + | chr3.1:83819855-83819874 | None:intergenic | 40.0% | |
| GACACATCCTTTCAAAAGGA+TGG | - | chr3.1:83819948-83819967 | MS.gene32700:intron | 40.0% | |
| GACTAGATCAATCCCTGAAA+AGG | + | chr3.1:83820567-83820586 | None:intergenic | 40.0% | |
| GAGAACTTATCTCCAAGAAC+TGG | + | chr3.1:83823071-83823090 | None:intergenic | 40.0% | |
| GATAAGTTCTCCAGTATGCA+TGG | - | chr3.1:83823080-83823099 | MS.gene32700:intron | 40.0% | |
| GATCAATCCCTGAAAAGGTT+GGG | + | chr3.1:83820562-83820581 | None:intergenic | 40.0% | |
| GATGTCATTGTCTGAAAGAG+TGG | + | chr3.1:83822306-83822325 | None:intergenic | 40.0% | |
| GCAGATGAAGAGAAATAGGA+TGG | - | chr3.1:83819291-83819310 | MS.gene32700:CDS | 40.0% | |
| GCATATTATCTGATGCAGGA+AGG | - | chr3.1:83821896-83821915 | MS.gene32700:intron | 40.0% | |
| GTAAAAAATTTGGCTGCCAC+AGG | - | chr3.1:83820811-83820830 | MS.gene32700:CDS | 40.0% | |
| GTCCGATCGCTGATATTTAT+GGG | - | chr3.1:83823951-83823970 | MS.gene32700:CDS | 40.0% | |
| GTTGGAGCAAATTTGCAAAG+TGG | - | chr3.1:83822639-83822658 | MS.gene32700:CDS | 40.0% | |
| GTTTGTTCGTAATCTGCACA+TGG | - | chr3.1:83822939-83822958 | MS.gene32700:intron | 40.0% | |
| TAAAGCTAAAGCACACCGAA+AGG | - | chr3.1:83822709-83822728 | MS.gene32700:CDS | 40.0% | |
| TAAATTGGTGGAAGGTTCGA+CGG | - | chr3.1:83819318-83819337 | MS.gene32700:CDS | 40.0% | |
| TACTAACAACCAAGAGTGGA+CGG | + | chr3.1:83821927-83821946 | None:intergenic | 40.0% | |
| TCTGATTGTCTTGGAAAACC+TGG | - | chr3.1:83822324-83822343 | MS.gene32700:intron | 40.0% | |
| TGGAAGATTACCTATGAAGC+TGG | + | chr3.1:83823322-83823341 | None:intergenic | 40.0% | |
| TGGAGCAAAGTTATTGTCTC+AGG | - | chr3.1:83824322-83824341 | MS.gene32700:CDS | 40.0% | |
| TGGGAAAGAGCTTGAAATAC+CGG | - | chr3.1:83823560-83823579 | MS.gene32700:CDS | 40.0% | |
| TTACTCTGACCAAGATATCC+AGG | + | chr3.1:83822345-83822364 | None:intergenic | 40.0% | |
| TTCAAGCTCTTTCCCAAACT+GGG | + | chr3.1:83823556-83823575 | None:intergenic | 40.0% | |
| TTCCAGTCCCTATTGGATAA+TGG | - | chr3.1:83821988-83822007 | MS.gene32700:intron | 40.0% | |
| TTGAAGTCCTCTTCTTCTTC+AGG | + | chr3.1:83822033-83822052 | None:intergenic | 40.0% | |
| TTGCAAATCATGACCATGCT+AGG | - | chr3.1:83822169-83822188 | MS.gene32700:intron | 40.0% | |
| TTTCAAGCTCTTTCCCAAAC+TGG | + | chr3.1:83823557-83823576 | None:intergenic | 40.0% | |
| ! | AAGTTTTCCTAAATGGGGAC+TGG | - | chr3.1:83820938-83820957 | MS.gene32700:CDS | 40.0% |
| ! | AGAACCCATATAGTGGAAGA+AGG | - | chr3.1:83821125-83821144 | MS.gene32700:CDS | 40.0% |
| ! | AGGTATCAAGTTTGGTGAGA+TGG | - | chr3.1:83824088-83824107 | MS.gene32700:CDS | 40.0% |
| ! | AGTCCACAATTTTCACCATC+TGG | + | chr3.1:83820790-83820809 | None:intergenic | 40.0% |
| ! | AGTTTTCCTAAATGGGGACT+GGG | - | chr3.1:83820939-83820958 | MS.gene32700:CDS | 40.0% |
| ! | ATGTGGATTGCATTAGCTTC+AGG | - | chr3.1:83823776-83823795 | MS.gene32700:CDS | 40.0% |
| ! | GAACGCTCTTCTTTTCTTAG+AGG | - | chr3.1:83819552-83819571 | MS.gene32700:CDS | 40.0% |
| ! | GACTAGATGCCGAGTTTTTA+TGG | - | chr3.1:83820348-83820367 | MS.gene32700:CDS | 40.0% |
| ! | GATGATGGCTTTCCATTTGT+TGG | - | chr3.1:83822621-83822640 | MS.gene32700:CDS | 40.0% |
| ! | GCATGGTCATGATTTGCAAA+TGG | + | chr3.1:83822168-83822187 | None:intergenic | 40.0% |
| ! | GTATCTAGCTTACATGGTGA+AGG | - | chr3.1:83819675-83819694 | MS.gene32700:intron | 40.0% |
| ! | GTCCACAATTTTCACCATCT+GGG | + | chr3.1:83820789-83820808 | None:intergenic | 40.0% |
| ! | TAATGGGCAGAATGCAATTG+TGG | - | chr3.1:83822389-83822408 | MS.gene32700:intron | 40.0% |
| ! | TAGATGCCGAGTTTTTATGG+TGG | - | chr3.1:83820351-83820370 | MS.gene32700:CDS | 40.0% |
| ! | TAGCTCTGCCACAAATGATA+TGG | + | chr3.1:83820983-83821002 | None:intergenic | 40.0% |
| ! | TATCTGAGACGAATCACTCA+GGG | + | chr3.1:83824171-83824190 | None:intergenic | 40.0% |
| ! | TCCACAATTTTCACCATCTG+GGG | + | chr3.1:83820788-83820807 | None:intergenic | 40.0% |
| ! | TGATCTCATCGATTATGGAG+AGG | - | chr3.1:83819450-83819469 | MS.gene32700:CDS | 40.0% |
| ! | TGGGGTGTTCAGTATTTGTT+TGG | - | chr3.1:83822060-83822079 | MS.gene32700:intron | 40.0% |
| !! | AACCGTGAGTTTTAATGACC+AGG | + | chr3.1:83820294-83820313 | None:intergenic | 40.0% |
| !! | AGCCATGGTTTGTAATGGAT+TGG | + | chr3.1:83820010-83820029 | None:intergenic | 40.0% |
| !! | CCCTGTTATCAGTTTTTCGA+CGG | + | chr3.1:83819723-83819742 | None:intergenic | 40.0% |
| !! | CGATTTGGAGGTATCAAGTT+TGG | - | chr3.1:83824080-83824099 | MS.gene32700:CDS | 40.0% |
| !! | GTTGATAGCCTTGATGATGA+TGG | - | chr3.1:83822606-83822625 | MS.gene32700:CDS | 40.0% |
| !!! | CAATGCCTTGTTTTGTGAAG+GGG | + | chr3.1:83823148-83823167 | None:intergenic | 40.0% |
| AACTCCTGGACAACTACTAG+AGG | - | chr3.1:83823211-83823230 | MS.gene32700:intron | 45.0% | |
| AAGAGGACTTCAAGACTGCT+TGG | - | chr3.1:83822040-83822059 | MS.gene32700:intron | 45.0% | |
| AAGCTAAAGCACACCGAAAG+GGG | - | chr3.1:83822711-83822730 | MS.gene32700:CDS | 45.0% | |
| AAGTGCACTTTGCACATGCT+AGG | - | chr3.1:83819800-83819819 | MS.gene32700:intron | 45.0% | |
| AATGGCGTGATTGAGCTGAT+TGG | - | chr3.1:83822006-83822025 | MS.gene32700:intron | 45.0% | |
| AATGGCTTCAACAGAGGAAG+TGG | + | chr3.1:83823294-83823313 | None:intergenic | 45.0% | |
| ACAACTACTAGAGGCTGCTT+TGG | - | chr3.1:83823220-83823239 | MS.gene32700:intron | 45.0% | |
| ACAACTCACAAGGGGAAAGT+GGG | + | chr3.1:83821594-83821613 | None:intergenic | 45.0% | |
| ACCAATCTTTGACAGAGGAG+AGG | + | chr3.1:83821424-83821443 | None:intergenic | 45.0% | |
| ACCCCAGATGGTGAAAATTG+TGG | - | chr3.1:83820784-83820803 | MS.gene32700:CDS | 45.0% | |
| ACGAACGAGTATACAACGGA+AGG | - | chr3.1:83823916-83823935 | MS.gene32700:CDS | 45.0% | |
| ACTTTGCACATGCTAGGAAG+CGG | - | chr3.1:83819806-83819825 | MS.gene32700:intron | 45.0% | |
| AGAGGACTTCAAGACTGCTT+GGG | - | chr3.1:83822041-83822060 | MS.gene32700:intron | 45.0% | |
| AGCCTGAGAAGAATGCTTCT+GGG | + | chr3.1:83822211-83822230 | None:intergenic | 45.0% | |
| AGGCAACAAGTTCAGTACAC+AGG | - | chr3.1:83820045-83820064 | MS.gene32700:intron | 45.0% | |
| ATCGAACAGCTGAGGAAGTA+TGG | + | chr3.1:83820863-83820882 | None:intergenic | 45.0% | |
| ATCGATTATGGAGAGGCAGA+TGG | - | chr3.1:83819457-83819476 | MS.gene32700:CDS | 45.0% | |
| ATCGGTACTTACTACTCCTG+TGG | + | chr3.1:83820830-83820849 | None:intergenic | 45.0% | |
| CACATTTATCGTCTGCCTCA+CGG | + | chr3.1:83819513-83819532 | None:intergenic | 45.0% | |
| CACTCGTCAATAGATTCTGC+GGG | + | chr3.1:83819604-83819623 | None:intergenic | 45.0% | |
| CAGAGCTACGAACTAGAAGA+CGG | - | chr3.1:83820995-83821014 | MS.gene32700:CDS | 45.0% | |
| CATGGAGAGAACCCATATAG+TGG | - | chr3.1:83821118-83821137 | MS.gene32700:CDS | 45.0% | |
| CCAATCTTTGACAGAGGAGA+GGG | + | chr3.1:83821423-83821442 | None:intergenic | 45.0% | |
| CCATTACTGACCAGCTTCAT+AGG | - | chr3.1:83823309-83823328 | MS.gene32700:intron | 45.0% | |
| CCTATGAAGCTGGTCAGTAA+TGG | + | chr3.1:83823312-83823331 | None:intergenic | 45.0% | |
| CTCCAGTAGAAAACGCTCTT+TGG | + | chr3.1:83819924-83819943 | None:intergenic | 45.0% | |
| CTGTAATGCGCCTTCATTGA+GGG | - | chr3.1:83820413-83820432 | MS.gene32700:CDS | 45.0% | |
| CTTTATACTATGGTCCGTCC+CGG | + | chr3.1:83822694-83822713 | None:intergenic | 45.0% | |
| CTTTGCTCCATATGGAACAC+TGG | + | chr3.1:83824312-83824331 | None:intergenic | 45.0% | |
| GATCAGTGCAGTGCATAGTT+CGG | + | chr3.1:83823426-83823445 | None:intergenic | 45.0% | |
| GATTCACAGAAACGGCAGTA+GGG | + | chr3.1:83824269-83824288 | None:intergenic | 45.0% | |
| GCACTCGTCAATAGATTCTG+CGG | + | chr3.1:83819605-83819624 | None:intergenic | 45.0% | |
| GCAGTCTCTGGTAGAATGTT+GGG | + | chr3.1:83823977-83823996 | None:intergenic | 45.0% | |
| GCCGTCGAAAAACTGATAAC+AGG | - | chr3.1:83819719-83819738 | MS.gene32700:intron | 45.0% | |
| GGCCCATAAATATCAGCGAT+CGG | + | chr3.1:83823956-83823975 | None:intergenic | 45.0% | |
| GGGAACGAACGAGTATACAA+CGG | - | chr3.1:83823912-83823931 | MS.gene32700:CDS | 45.0% | |
| GGTCCGATCGCTGATATTTA+TGG | - | chr3.1:83823950-83823969 | MS.gene32700:CDS | 45.0% | |
| GTCAGTAATGGCTTCAACAG+AGG | + | chr3.1:83823300-83823319 | None:intergenic | 45.0% | |
| GTCTGAAAGAGTGGTCTTTG+TGG | + | chr3.1:83822297-83822316 | None:intergenic | 45.0% | |
| GTGCGCATATTATCTGATGC+AGG | - | chr3.1:83821892-83821911 | MS.gene32700:intron | 45.0% | |
| GTGCTGTCTTCGAATGATGA+GGG | - | chr3.1:83822750-83822769 | MS.gene32700:CDS | 45.0% | |
| GTGGTGATATTATCATCGGG+CGG | - | chr3.1:83822658-83822677 | MS.gene32700:CDS | 45.0% | |
| GTTCAGTACACAGGAAAGGT+CGG | - | chr3.1:83820054-83820073 | MS.gene32700:intron | 45.0% | |
| TAACCTTCATTCGGTCAGCT+AGG | + | chr3.1:83820157-83820176 | None:intergenic | 45.0% | |
| TAGCCTGAGAAGAATGCTTC+TGG | + | chr3.1:83822212-83822231 | None:intergenic | 45.0% | |
| TATCCTAGCTGACCGAATGA+AGG | - | chr3.1:83820151-83820170 | MS.gene32700:intron | 45.0% | |
| TCAACAGAGGAAGTGGAGAA+AGG | + | chr3.1:83823287-83823306 | None:intergenic | 45.0% | |
| TCAGGGATTGATCTAGTCTC+TGG | - | chr3.1:83820569-83820588 | MS.gene32700:intron | 45.0% | |
| TCCAGTATGCATGGACAGAA+GGG | - | chr3.1:83823089-83823108 | MS.gene32700:intron | 45.0% | |
| TCGAAACAAGAGGCTTGAGT+TGG | - | chr3.1:83819750-83819769 | MS.gene32700:intron | 45.0% | |
| TCGACGGAGGGAATTACAAA+CGG | - | chr3.1:83819334-83819353 | MS.gene32700:CDS | 45.0% | |
| TCTGTAATGCGCCTTCATTG+AGG | - | chr3.1:83820412-83820431 | MS.gene32700:CDS | 45.0% | |
| TGAATCAGCCGATGACATTG+TGG | - | chr3.1:83824283-83824302 | MS.gene32700:CDS | 45.0% | |
| TGACTTTGTCTTCGGACATG+TGG | + | chr3.1:83824001-83824020 | None:intergenic | 45.0% | |
| TGATTCACAGAAACGGCAGT+AGG | + | chr3.1:83824270-83824289 | None:intergenic | 45.0% | |
| TGCAAATGTGATCTTGCGAC+CGG | - | chr3.1:83824217-83824236 | MS.gene32700:CDS | 45.0% | |
| TGCAAGGTCACAACTCACAA+GGG | + | chr3.1:83821603-83821622 | None:intergenic | 45.0% | |
| TGCAGTCTCTGGTAGAATGT+TGG | + | chr3.1:83823978-83823997 | None:intergenic | 45.0% | |
| TGCTGTCTTCGAATGATGAG+GGG | - | chr3.1:83822751-83822770 | MS.gene32700:CDS | 45.0% | |
| TGTAATGCGCCTTCATTGAG+GGG | - | chr3.1:83820414-83820433 | MS.gene32700:CDS | 45.0% | |
| TGTCTGTCGAGATACCTGTA+TGG | - | chr3.1:83819383-83819402 | MS.gene32700:CDS | 45.0% | |
| TGTGCTGTCTTCGAATGATG+AGG | - | chr3.1:83822749-83822768 | MS.gene32700:CDS | 45.0% | |
| TTCAGTACACAGGAAAGGTC+GGG | - | chr3.1:83820055-83820074 | MS.gene32700:intron | 45.0% | |
| TTCCTCAGCTGTTCGATTGT+GGG | - | chr3.1:83820866-83820885 | MS.gene32700:CDS | 45.0% | |
| TTGAAAGCAACAGCCCAGTA+TGG | + | chr3.1:83819268-83819287 | None:intergenic | 45.0% | |
| ! | ACAATTTTCACCATCTGGGG+TGG | + | chr3.1:83820785-83820804 | None:intergenic | 45.0% |
| ! | ATCAACGTCCCAACCTTTTC+AGG | - | chr3.1:83820551-83820570 | MS.gene32700:intron | 45.0% |
| ! | CAACTACTAGAGGCTGCTTT+GGG | - | chr3.1:83823221-83823240 | MS.gene32700:intron | 45.0% |
| ! | CATCGGCTGATTCACAGAAA+CGG | + | chr3.1:83824277-83824296 | None:intergenic | 45.0% |
| ! | GATTGGTCCTGAAGAAGAAG+AGG | - | chr3.1:83822023-83822042 | MS.gene32700:intron | 45.0% |
| ! | GGAACTGGAAAGAGCATGTT+AGG | - | chr3.1:83823723-83823742 | MS.gene32700:CDS | 45.0% |
| ! | GGCAAGGTATCTAGCTTACA+TGG | - | chr3.1:83819669-83819688 | MS.gene32700:intron | 45.0% |
| ! | GGGACGATTTTCGAAACAAG+AGG | - | chr3.1:83819740-83819759 | MS.gene32700:intron | 45.0% |
| ! | GTATCTGAGACGAATCACTC+AGG | + | chr3.1:83824172-83824191 | None:intergenic | 45.0% |
| ! | TAAGTGACAGCGTTTTGCAG+AGG | + | chr3.1:83821395-83821414 | None:intergenic | 45.0% |
| ! | TCAACGTCCCAACCTTTTCA+GGG | - | chr3.1:83820552-83820571 | MS.gene32700:intron | 45.0% |
| ! | TGTTTTCTTTCCACCCCAGA+TGG | - | chr3.1:83820772-83820791 | MS.gene32700:CDS | 45.0% |
| !! | ATCCCAGAAGCATTCTTCTC+AGG | - | chr3.1:83822206-83822225 | MS.gene32700:intron | 45.0% |
| !! | CACTATTAAGCATCGGTCAC+CGG | + | chr3.1:83823582-83823601 | None:intergenic | 45.0% |
| !! | GAGAAGAATGCTTCTGGGAT+TGG | + | chr3.1:83822206-83822225 | None:intergenic | 45.0% |
| !! | TTTGGGATTTCTGGAGTCTC+AGG | - | chr3.1:83823115-83823134 | MS.gene32700:intron | 45.0% |
| !!! | ACAGAGCTGGCTTTTCAAGA+TGG | - | chr3.1:83823889-83823908 | MS.gene32700:CDS | 45.0% |
| !!! | AGAGCTGGCTTTTCAAGATG+GGG | - | chr3.1:83823891-83823910 | MS.gene32700:CDS | 45.0% |
| !!! | CAGAGCTGGCTTTTCAAGAT+GGG | - | chr3.1:83823890-83823909 | MS.gene32700:CDS | 45.0% |
| !!! | CATGGACAGAAGGGTGTTTT+GGG | - | chr3.1:83823098-83823117 | MS.gene32700:intron | 45.0% |
| !!! | CTCCAAAGAGCGTTTTCTAC+TGG | - | chr3.1:83819919-83819938 | MS.gene32700:intron | 45.0% |
| !!! | GAAGGGTGTTTTGGGATTTC+TGG | - | chr3.1:83823106-83823125 | MS.gene32700:intron | 45.0% |
| AAGGATTCTCCGTCCACTCT+TGG | - | chr3.1:83821915-83821934 | MS.gene32700:intron | 50.0% | |
| ACCCTTCTGTCCATGCATAC+TGG | + | chr3.1:83823093-83823112 | None:intergenic | 50.0% | |
| ACGAATCACTCAGGGTGAAG+AGG | + | chr3.1:83824163-83824182 | None:intergenic | 50.0% | |
| ACTCGGCATCTAGTCTACAC+AGG | + | chr3.1:83820343-83820362 | None:intergenic | 50.0% | |
| ACTGGCCACCACAATGTCAT+CGG | + | chr3.1:83824294-83824313 | None:intergenic | 50.0% | |
| AGCTACGAACTAGAAGACGG+AGG | - | chr3.1:83820998-83821017 | MS.gene32700:CDS | 50.0% | |
| AGTAGGGACCTCGAATCTTC+CGG | + | chr3.1:83824253-83824272 | None:intergenic | 50.0% | |
| ATCAGCCGATGACATTGTGG+TGG | - | chr3.1:83824286-83824305 | MS.gene32700:CDS | 50.0% | |
| ATCCCACAATCGAACAGCTG+AGG | + | chr3.1:83820871-83820890 | None:intergenic | 50.0% | |
| CAAACCTTACCCCAGTGAGA+AGG | + | chr3.1:83820754-83820773 | None:intergenic | 50.0% | |
| CACAACTCACAAGGGGAAAG+TGG | + | chr3.1:83821595-83821614 | None:intergenic | 50.0% | |
| CCCTCTCCTCTGTCAAAGAT+TGG | - | chr3.1:83821420-83821439 | MS.gene32700:CDS | 50.0% | |
| CGAAGCACGGTTCATAACCA+AGG | + | chr3.1:83822451-83822470 | None:intergenic | 50.0% | |
| CGAGTATACAACGGAAGGAC+CGG | - | chr3.1:83823921-83823940 | MS.gene32700:CDS | 50.0% | |
| CGCCATTATCCAATAGGGAC+TGG | + | chr3.1:83821993-83822012 | None:intergenic | 50.0% | |
| CGTGATTGCCTGATAGCTCA+TGG | - | chr3.1:83824113-83824132 | MS.gene32700:CDS | 50.0% | |
| CTCAATCGCGTCTCATTGCT+AGG | - | chr3.1:83823635-83823654 | MS.gene32700:CDS | 50.0% | |
| CTCCAGTATGCATGGACAGA+AGG | - | chr3.1:83823088-83823107 | MS.gene32700:intron | 50.0% | |
| CTTCCTCAGCTGTTCGATTG+TGG | - | chr3.1:83820865-83820884 | MS.gene32700:CDS | 50.0% | |
| GAGGAATGAGTTGCCTCATC+AGG | - | chr3.1:83821017-83821036 | MS.gene32700:CDS | 50.0% | |
| GAGGACTTCAAGACTGCTTG+GGG | - | chr3.1:83822042-83822061 | MS.gene32700:intron | 50.0% | |
| GCAAGGTCACAACTCACAAG+GGG | + | chr3.1:83821602-83821621 | None:intergenic | 50.0% | |
| GCTCTGCAGAGAGACCTTTA+TGG | - | chr3.1:83819838-83819857 | MS.gene32700:intron | 50.0% | |
| GGTACAACACTCTCCTAGCA+TGG | + | chr3.1:83822185-83822204 | None:intergenic | 50.0% | |
| GTGCAAGGTCACAACTCACA+AGG | + | chr3.1:83821604-83821623 | None:intergenic | 50.0% | |
| GTGGCTGTCAATGTGCATCT+CGG | - | chr3.1:83822408-83822427 | MS.gene32700:intron | 50.0% | |
| TCAGCTGTTCGATTGTGGGA+TGG | - | chr3.1:83820870-83820889 | MS.gene32700:CDS | 50.0% | |
| TCAGTACACAGGAAAGGTCG+GGG | - | chr3.1:83820056-83820075 | MS.gene32700:intron | 50.0% | |
| TCGTCAATAGATTCTGCGGG+TGG | + | chr3.1:83819601-83819620 | None:intergenic | 50.0% | |
| TCTCAGGAGCTGTTCAGCAT+GGG | - | chr3.1:83824338-83824357 | MS.gene32700:CDS | 50.0% | |
| TCTCTTTGCATCCATCCGTG+AGG | - | chr3.1:83819495-83819514 | MS.gene32700:CDS | 50.0% | |
| TGTCGCGAAGGAAATGCATG+TGG | + | chr3.1:83823191-83823210 | None:intergenic | 50.0% | |
| TTCCTAAATGGGGACTGGGT+TGG | - | chr3.1:83820943-83820962 | MS.gene32700:CDS | 50.0% | |
| TTGCAGGCATCCTTCTCACT+GGG | - | chr3.1:83820741-83820760 | MS.gene32700:CDS | 50.0% | |
| TTTATCGTCTGCCTCACGGA+TGG | + | chr3.1:83819509-83819528 | None:intergenic | 50.0% | |
| TTTCCTTCGCGACAAACTCC+TGG | - | chr3.1:83823197-83823216 | MS.gene32700:intron | 50.0% | |
| ! | CTGAAGCACCATGAGCTATC+AGG | + | chr3.1:83824124-83824143 | None:intergenic | 50.0% |
| ! | GAGCGTTTTCTACTGGAGCT+TGG | - | chr3.1:83819926-83819945 | MS.gene32700:intron | 50.0% |
| !! | AACAAGAGGCTTGAGTTGGC+TGG | - | chr3.1:83819754-83819773 | MS.gene32700:intron | 50.0% |
| !! | ACTAGAGGCTGCTTTGGGAA+AGG | - | chr3.1:83823226-83823245 | MS.gene32700:intron | 50.0% |
| !! | CTAGAGGCTGCTTTGGGAAA+GGG | - | chr3.1:83823227-83823246 | MS.gene32700:intron | 50.0% |
| !! | GATGGAAAGGATTTCTGGCG+TGG | - | chr3.1:83819966-83819985 | MS.gene32700:intron | 50.0% |
| !! | TCGCTTGTGTTGGTTCACTG+AGG | - | chr3.1:83823252-83823271 | MS.gene32700:intron | 50.0% |
| !! | TGCTGTTGTTTCGCTGAGAC+AGG | - | chr3.1:83822782-83822801 | MS.gene32700:intron | 50.0% |
| !!! | GAGCTGGCTTTTCAAGATGG+GGG | - | chr3.1:83823892-83823911 | MS.gene32700:CDS | 50.0% |
| !!! | GCATGGACAGAAGGGTGTTT+TGG | - | chr3.1:83823097-83823116 | MS.gene32700:intron | 50.0% |
| AATCGCTTCCTGTCAGCGAC+AGG | + | chr3.1:83824065-83824084 | None:intergenic | 55.0% | |
| ATCTTCCGGCCACCAGATAC+CGG | + | chr3.1:83824239-83824258 | None:intergenic | 55.0% | |
| ATCTTGCGACCGGTATCTGG+TGG | - | chr3.1:83824227-83824246 | MS.gene32700:CDS | 55.0% | |
| ATTGGTGGAAGGTTCGACGG+AGG | - | chr3.1:83819321-83819340 | MS.gene32700:CDS | 55.0% | |
| CACATGCTAGGAAGCGGATG+GGG | - | chr3.1:83819812-83819831 | MS.gene32700:intron | 55.0% | |
| CAGGCTCGCTTTCAGGCTTT+CGG | - | chr3.1:83823702-83823721 | MS.gene32700:CDS | 55.0% | |
| CAGGTTAGGAGCCCAGTTCT+TGG | - | chr3.1:83823056-83823075 | MS.gene32700:intron | 55.0% | |
| CGCTTTCAGGCTTTCGGAAC+TGG | - | chr3.1:83823708-83823727 | MS.gene32700:CDS | 55.0% | |
| CTCCAACCCAGTCCCCATTT+AGG | + | chr3.1:83820948-83820967 | None:intergenic | 55.0% | |
| CTGGCGTGGTTGCAACTCTT+GGG | - | chr3.1:83819980-83819999 | MS.gene32700:intron | 55.0% | |
| GCACATGCTAGGAAGCGGAT+GGG | - | chr3.1:83819811-83819830 | MS.gene32700:intron | 55.0% | |
| GCAGCCTCTAGTAGTTGTCC+AGG | + | chr3.1:83823218-83823237 | None:intergenic | 55.0% | |
| GCATCCTTCTCACTGGGGTA+AGG | - | chr3.1:83820747-83820766 | MS.gene32700:CDS | 55.0% | |
| GTAGATCCAGGCTCGCTTTC+AGG | - | chr3.1:83823695-83823714 | MS.gene32700:CDS | 55.0% | |
| GTCGCTGACAGGAAGCGATT+TGG | - | chr3.1:83824065-83824084 | MS.gene32700:CDS | 55.0% | |
| GTCTCAGGAGCTGTTCAGCA+TGG | - | chr3.1:83824337-83824356 | MS.gene32700:CDS | 55.0% | |
| GTGATCTTGCGACCGGTATC+TGG | - | chr3.1:83824224-83824243 | MS.gene32700:CDS | 55.0% | |
| GTGGTGGCCAGTGTTCCATA+TGG | - | chr3.1:83824302-83824321 | MS.gene32700:CDS | 55.0% | |
| GTTGCAGGCATCCTTCTCAC+TGG | - | chr3.1:83820740-83820759 | MS.gene32700:CDS | 55.0% | |
| TCTGGCGTGGTTGCAACTCT+TGG | - | chr3.1:83819979-83819998 | MS.gene32700:intron | 55.0% | |
| TGCACATGCTAGGAAGCGGA+TGG | - | chr3.1:83819810-83819829 | MS.gene32700:intron | 55.0% | |
| TGCAGGCATCCTTCTCACTG+GGG | - | chr3.1:83820742-83820761 | MS.gene32700:CDS | 55.0% | |
| TGTCCAGGAGTTTGTCGCGA+AGG | + | chr3.1:83823203-83823222 | None:intergenic | 55.0% | |
| TTGGTGGAAGGTTCGACGGA+GGG | - | chr3.1:83819322-83819341 | MS.gene32700:CDS | 55.0% | |
| ! | GCTGACAGGAAGCGATTTGG+AGG | - | chr3.1:83824068-83824087 | MS.gene32700:CDS | 55.0% |
| !! | GGAAAGGGCATCGCTTGTGT+TGG | - | chr3.1:83823242-83823261 | MS.gene32700:intron | 55.0% |
| AACCGTGCTTCGTTGCAGCG+CGG | - | chr3.1:83822459-83822478 | MS.gene32700:intron | 60.0% | |
| CAACGGAAGGACCGGTGAGA+TGG | - | chr3.1:83823929-83823948 | MS.gene32700:CDS | 60.0% | |
| CAGCGATCGGACCATCTCAC+CGG | + | chr3.1:83823943-83823962 | None:intergenic | 60.0% | |
| CGAAAGCCTGAAAGCGAGCC+TGG | + | chr3.1:83823704-83823723 | None:intergenic | 60.0% | |
| CGGACATGTGGTGCAGTCTC+TGG | + | chr3.1:83823989-83824008 | None:intergenic | 60.0% | |
| TACCGCGCTGCAACGAAGCA+CGG | + | chr3.1:83822464-83822483 | None:intergenic | 60.0% | |
| TCCTGTCAGCGACAGGCTGT+CGG | + | chr3.1:83824058-83824077 | None:intergenic | 60.0% | |
| TCTGGTGGCCGGAAGATTCG+AGG | - | chr3.1:83824242-83824261 | MS.gene32700:CDS | 60.0% | |
| TGCTAGGAAGCGGATGGGGA+AGG | - | chr3.1:83819816-83819835 | MS.gene32700:intron | 60.0% | |
| ! | TGAGTTGGCTGGTGAGCTGC+TGG | - | chr3.1:83819765-83819784 | MS.gene32700:intron | 60.0% |
| !! | ATCGGGCGGTGTGCTGATTC+CGG | - | chr3.1:83822672-83822691 | MS.gene32700:CDS | 60.0% |
| CCTGTCAGCGACAGGCTGTC+GGG | + | chr3.1:83824057-83824076 | None:intergenic | 65.0% | |
| GTCGGGTCAGCGGGTGAACT+GGG | + | chr3.1:83824040-83824059 | None:intergenic | 65.0% | |
| TGCGACCGGTATCTGGTGGC+CGG | - | chr3.1:83824231-83824250 | MS.gene32700:CDS | 65.0% | |
| TGTCGGGTCAGCGGGTGAAC+TGG | + | chr3.1:83824041-83824060 | None:intergenic | 65.0% | |
| !! | GCGGTGTGCTGATTCCGGGA+CGG | - | chr3.1:83822677-83822696 | MS.gene32700:CDS | 65.0% |
| !! | TCGGGCGGTGTGCTGATTCC+GGG | - | chr3.1:83822673-83822692 | MS.gene32700:CDS | 65.0% |
| CCCGACAGCCTGTCGCTGAC+AGG | - | chr3.1:83824054-83824073 | MS.gene32700:CDS | 70.0% | |
| CGACAGGCTGTCGGGTCAGC+GGG | + | chr3.1:83824049-83824068 | None:intergenic | 70.0% | |
| GCGACAGGCTGTCGGGTCAG+CGG | + | chr3.1:83824050-83824069 | None:intergenic | 70.0% | |
| GGTCAGCGGGTGAACTGGGC+CGG | + | chr3.1:83824036-83824055 | None:intergenic | 70.0% | |
| TGGTGAGCTGCTGGAGCGCG+AGG | - | chr3.1:83819774-83819793 | MS.gene32700:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 83819148 | 83824394 | 83819148 | ID=MS.gene32700 |
| chr3.1 | mRNA | 83819148 | 83824394 | 83819148 | ID=MS.gene32700.t1;Parent=MS.gene32700 |
| chr3.1 | exon | 83823451 | 83824394 | 83823451 | ID=MS.gene32700.t1.exon1;Parent=MS.gene32700.t1 |
| chr3.1 | CDS | 83823451 | 83824394 | 83823451 | ID=cds.MS.gene32700.t1;Parent=MS.gene32700.t1 |
| chr3.1 | exon | 83822504 | 83822795 | 83822504 | ID=MS.gene32700.t1.exon2;Parent=MS.gene32700.t1 |
| chr3.1 | CDS | 83822504 | 83822795 | 83822504 | ID=cds.MS.gene32700.t1;Parent=MS.gene32700.t1 |
| chr3.1 | exon | 83820739 | 83821683 | 83820739 | ID=MS.gene32700.t1.exon3;Parent=MS.gene32700.t1 |
| chr3.1 | CDS | 83820739 | 83821683 | 83820739 | ID=cds.MS.gene32700.t1;Parent=MS.gene32700.t1 |
| chr3.1 | exon | 83820212 | 83820483 | 83820212 | ID=MS.gene32700.t1.exon4;Parent=MS.gene32700.t1 |
| chr3.1 | CDS | 83820212 | 83820483 | 83820212 | ID=cds.MS.gene32700.t1;Parent=MS.gene32700.t1 |
| chr3.1 | exon | 83819148 | 83819649 | 83819148 | ID=MS.gene32700.t1.exon5;Parent=MS.gene32700.t1 |
| chr3.1 | CDS | 83819148 | 83819649 | 83819148 | ID=cds.MS.gene32700.t1;Parent=MS.gene32700.t1 |
| Gene Sequence |
| Protein sequence |
