Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81044.t1 | XP_003627461.2 | 99.9 | 821 | 1 | 0 | 1 | 821 | 1 | 821 | 0.00E+00 | 1503.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81044.t1 | X5JB51 | 81.4 | 816 | 137 | 4 | 18 | 820 | 12 | 825 | 0.0e+00 | 1228.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81044.t1 | G7L9W1 | 99.9 | 821 | 1 | 0 | 1 | 821 | 1 | 821 | 0.0e+00 | 1503.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049193 | MS.gene81044 | 0.802943 | 4.41E-49 | -1.69E-46 |
| MS.gene051020 | MS.gene81044 | 0.903187 | 4.50E-79 | -1.69E-46 |
| MS.gene052678 | MS.gene81044 | 0.803278 | 3.76E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene81044 | 0.826764 | 2.27E-54 | -1.69E-46 |
| MS.gene054585 | MS.gene81044 | 0.803261 | 3.79E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81044.t1 | MTR_8g023330 | 99.878 | 821 | 1 | 0 | 1 | 821 | 1 | 821 | 0.0 | 1675 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81044.t1 | AT5G12370 | 81.005 | 816 | 136 | 5 | 18 | 820 | 12 | 821 | 0.0 | 1313 |
| MS.gene81044.t1 | AT5G12370 | 81.005 | 816 | 136 | 5 | 18 | 820 | 12 | 821 | 0.0 | 1313 |
| MS.gene81044.t1 | AT5G12370 | 80.392 | 816 | 136 | 6 | 18 | 820 | 12 | 816 | 0.0 | 1298 |
Find 184 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATGCGTTGTTCGGGAATT+TGG | 0.126049 | 8.4:+71525519 | MS.gene81044:CDS |
| TTAATTTCTGCAGTACTTAA+TGG | 0.176363 | 8.4:+71527745 | MS.gene81044:intron |
| TATTACCTGAGACAAAATTT+TGG | 0.259562 | 8.4:-71529395 | None:intergenic |
| TTCTCGTTCGATGCGTTGTT+CGG | 0.268377 | 8.4:+71525511 | MS.gene81044:CDS |
| AGTTGCAGTTGCTAATTTAC+AGG | 0.271879 | 8.4:+71528032 | MS.gene81044:CDS |
| AGCAGCGGAGGATGCGGATT+TGG | 0.272779 | 8.4:-71525347 | None:intergenic |
| TTGCGCATCTTTCCGAATGC+TGG | 0.291509 | 8.4:-71534821 | None:intergenic |
| TGATTGTTGCAGCCTCTTTA+CGG | 0.294367 | 8.4:-71530064 | None:intergenic |
| GGAGATCTCTAGCAATTTCT+TGG | 0.301544 | 8.4:-71530475 | None:intergenic |
| GCCTAGATTTATTCAACTTC+GGG | 0.314366 | 8.4:+71535117 | MS.gene81044:intron |
| GCAGCGAGTCACCGCCCTTC+TGG | 0.324255 | 8.4:+71530253 | MS.gene81044:CDS |
| CAGCTAGAGAAAGGTGTAGA+TGG | 0.326386 | 8.4:+71527371 | MS.gene81044:intron |
| GACAAAAGCTTCTCAACTTC+AGG | 0.326594 | 8.4:-71525643 | None:intergenic |
| GCAGAGGCCGCGGCTGCTGC+TGG | 0.329546 | 8.4:+71532211 | MS.gene81044:CDS |
| ACAAGGGTTGCCAGTGTAGA+AGG | 0.332707 | 8.4:-71531827 | None:intergenic |
| CATCCTTGTGACTTGAAAAC+AGG | 0.334802 | 8.4:-71531140 | None:intergenic |
| TCATTTGCTGAAGAAGATAT+TGG | 0.334971 | 8.4:+71527949 | MS.gene81044:CDS |
| AGCCAGATTTCTGATTCATC+TGG | 0.335866 | 8.4:+71531313 | MS.gene81044:CDS |
| GCGGACACCAGGCTGGTTCT+AGG | 0.336230 | 8.4:+71529885 | MS.gene81044:CDS |
| AGCCCACGAGCAACATTATT+AGG | 0.340459 | 8.4:-71529930 | None:intergenic |
| GGCTTATCTTTCTCGGGTGC+TGG | 0.343834 | 8.4:+71533527 | MS.gene81044:CDS |
| TCTCGTTCGATGCGTTGTTC+GGG | 0.347784 | 8.4:+71525512 | MS.gene81044:CDS |
| TGGAGAATAGATTGCTTTCT+CGG | 0.349635 | 8.4:+71529323 | MS.gene81044:CDS |
| AGAGATGCCTGCTCATATTC+AGG | 0.349710 | 8.4:-71531168 | None:intergenic |
| ACAAGCATTTCTGTCTGAAT+TGG | 0.352400 | 8.4:+71533584 | MS.gene81044:CDS |
| AAGCGTGACATTACCGAGTA+TGG | 0.355160 | 8.4:+71534588 | MS.gene81044:CDS |
| GGGTTGTGGCTTATCTTTCT+CGG | 0.358924 | 8.4:+71533520 | MS.gene81044:intron |
| TCTTTGCAATTCAGTTCAAC+AGG | 0.365052 | 8.4:+71529796 | MS.gene81044:intron |
| TTCCCTCAAATTAGCAGCTT+CGG | 0.376021 | 8.4:-71532028 | None:intergenic |
| TCTTGTAAATTTACCTTCCA+TGG | 0.376363 | 8.4:+71530298 | MS.gene81044:CDS |
| GCATTAGTTGGCCGGTGGTC+GGG | 0.380439 | 8.4:-71532816 | None:intergenic |
| TCTGCATTCACTGCTTTAGA+AGG | 0.381680 | 8.4:+71533552 | MS.gene81044:CDS |
| TCTGATTCATCTGGGACAAT+TGG | 0.388160 | 8.4:+71531322 | MS.gene81044:CDS |
| TTTGTTCAAGGATTCTTGTA+AGG | 0.398340 | 8.4:+71525666 | MS.gene81044:CDS |
| GGGAAATGCAACTGCGAGCC+GGG | 0.404849 | 8.4:+71528002 | MS.gene81044:CDS |
| CAAAAGCCTAGATATAGAAT+TGG | 0.406005 | 8.4:-71532402 | None:intergenic |
| AAAATTGACATAACTTCGTT+GGG | 0.407066 | 8.4:-71530104 | None:intergenic |
| CATCAGCACCTTCCGCTTCA+AGG | 0.409002 | 8.4:-71525576 | None:intergenic |
| CATCCAAACTGAGTTCTTTG+TGG | 0.409434 | 8.4:+71535164 | MS.gene81044:CDS |
| TAAAATTGACATAACTTCGT+TGG | 0.411385 | 8.4:-71530105 | None:intergenic |
| AGACCACAAAGAACTCAGTT+TGG | 0.414387 | 8.4:-71535167 | None:intergenic |
| TCTTGACATCGATGATTTCA+AGG | 0.414959 | 8.4:+71525384 | MS.gene81044:CDS |
| ATTGCTTGAGCTACGTAAAC+AGG | 0.415837 | 8.4:+71525690 | MS.gene81044:CDS |
| AACCTGTGATTTCTTTGTAC+AGG | 0.417363 | 8.4:-71529959 | None:intergenic |
| CACCTTGTGCAGGCATTAGT+TGG | 0.421090 | 8.4:-71532828 | None:intergenic |
| TCCCAGATGAATCAGAAATC+TGG | 0.424906 | 8.4:-71531315 | None:intergenic |
| TGCGCATCTTTCCGAATGCT+GGG | 0.425011 | 8.4:-71534820 | None:intergenic |
| GGCATTAGTTGGCCGGTGGT+CGG | 0.425834 | 8.4:-71532817 | None:intergenic |
| TCGGGAGCCATTCCATCATC+AGG | 0.427235 | 8.4:-71532798 | None:intergenic |
| TTTGAGGGAAAGATTTGTGC+TGG | 0.437594 | 8.4:+71532041 | MS.gene81044:CDS |
| GGTTGTGGCTTATCTTTCTC+GGG | 0.442710 | 8.4:+71533521 | MS.gene81044:CDS |
| TATCAGCTCAATAGTTTGAC+TGG | 0.445366 | 8.4:-71527652 | None:intergenic |
| GTTTGAAAGCTTTGCGAGGT+TGG | 0.449304 | 8.4:+71527397 | MS.gene81044:CDS |
| TGCTGCTGCTTGTGAAGAAA+TGG | 0.450519 | 8.4:+71532445 | MS.gene81044:CDS |
| GAGTCTTTCAACTTTGTTTG+AGG | 0.453466 | 8.4:+71534792 | MS.gene81044:CDS |
| TGCCTAGATTTATTCAACTT+CGG | 0.454376 | 8.4:+71535116 | MS.gene81044:intron |
| ATGGTTGCTGTACAACGTTC+AGG | 0.460896 | 8.4:+71532256 | MS.gene81044:CDS |
| CAATGTCTTCATTGTTGCTC+CGG | 0.462455 | 8.4:+71534768 | MS.gene81044:CDS |
| TTGAAAACAGGGACTCTGTC+AGG | 0.463495 | 8.4:-71531128 | None:intergenic |
| GAGATCTCTAGCAATTTCTT+GGG | 0.466903 | 8.4:-71530474 | None:intergenic |
| GGTCAGACAGCTGCAAAGAT+AGG | 0.468831 | 8.4:+71527440 | MS.gene81044:CDS |
| TGACCGAAGCTGCTAATTTG+AGG | 0.470299 | 8.4:+71532025 | MS.gene81044:CDS |
| GAAGGTAAATTTACAAGAGA+TGG | 0.473391 | 8.4:-71530293 | None:intergenic |
| GATTATAAATCCCCTGATGA+TGG | 0.475182 | 8.4:+71532786 | MS.gene81044:CDS |
| ATTTACTTACTTGGTCTAGC+AGG | 0.475682 | 8.4:-71531868 | None:intergenic |
| GGGACAATTGGACGCTCAAA+GGG | 0.479565 | 8.4:+71531334 | MS.gene81044:CDS |
| TTGAGGGTACACCCAGCATT+CGG | 0.483355 | 8.4:+71534809 | MS.gene81044:CDS |
| GCTGCAGTATCTTCGCATGC+TGG | 0.484675 | 8.4:+71530433 | MS.gene81044:intron |
| TGATATGCAGGCAGAGGCCG+CGG | 0.485096 | 8.4:+71532201 | MS.gene81044:intron |
| AGTCTTTCAACTTTGTTTGA+GGG | 0.486146 | 8.4:+71534793 | MS.gene81044:CDS |
| GAAAGCTCCATCAGGTCACC+AGG | 0.489966 | 8.4:-71527782 | None:intergenic |
| GTTGCATTTCCCACCGCTGA+TGG | 0.490919 | 8.4:-71527991 | None:intergenic |
| TATAGCTGAAGGTCTTGAAC+GGG | 0.492792 | 8.4:+71531990 | MS.gene81044:CDS |
| GACATAACTTCGTTGGGTGA+AGG | 0.494136 | 8.4:-71530098 | None:intergenic |
| ACTCAGTTTGGATGCCAGCT+TGG | 0.495845 | 8.4:-71535155 | None:intergenic |
| TAGGACTACTTTGTGCAGCC+TGG | 0.497139 | 8.4:-71529911 | None:intergenic |
| GAAGGAAGCAGCGGAGGATG+CGG | 0.499532 | 8.4:-71525353 | None:intergenic |
| TAACTAATAGTTTGTCCAGA+AGG | 0.500273 | 8.4:-71530268 | None:intergenic |
| TGGGAAATGCAACTGCGAGC+CGG | 0.502525 | 8.4:+71528001 | MS.gene81044:CDS |
| ATGGAATGGCTCCCGACCAC+CGG | 0.502883 | 8.4:+71532805 | MS.gene81044:CDS |
| AACAAAGTTGAAAGACTCTC+CGG | 0.505806 | 8.4:-71534787 | None:intergenic |
| TGGGACAATTGGACGCTCAA+AGG | 0.511647 | 8.4:+71531333 | MS.gene81044:CDS |
| TTGTGCAGGCATTAGTTGGC+CGG | 0.512518 | 8.4:-71532824 | None:intergenic |
| AAAGAGGAGAAAGCTCCATC+AGG | 0.514653 | 8.4:-71527790 | None:intergenic |
| AAGTGCCATGCAACATTATG+TGG | 0.515645 | 8.4:+71529824 | MS.gene81044:CDS |
| GACCGAAGCTGCTAATTTGA+GGG | 0.517004 | 8.4:+71532026 | MS.gene81044:CDS |
| TGCAGATGCTCAGCGAGAAA+CGG | 0.519365 | 8.4:+71527629 | MS.gene81044:CDS |
| ACGTCCAATGTTTATTGATG+TGG | 0.519877 | 8.4:+71529851 | MS.gene81044:CDS |
| TAGCAGCCCTGGTGACCTGA+TGG | 0.522478 | 8.4:+71527775 | MS.gene81044:CDS |
| ACATAACTTCGTTGGGTGAA+GGG | 0.523172 | 8.4:-71530097 | None:intergenic |
| GGACTACAAGAGTGCCAAGC+TGG | 0.525447 | 8.4:+71535141 | MS.gene81044:CDS |
| ATGGAGTTCAATAGCAGCCC+TGG | 0.527765 | 8.4:+71527764 | MS.gene81044:CDS |
| ACCTGTGATTTCTTTGTACA+GGG | 0.529358 | 8.4:-71529958 | None:intergenic |
| AGCTAGAGAAAGGTGTAGAT+GGG | 0.530266 | 8.4:+71527372 | MS.gene81044:intron |
| TGCAGATACTGTCCGTAAAG+AGG | 0.531935 | 8.4:+71530052 | MS.gene81044:intron |
| AACTGTAGGATGTGGTGACT+TGG | 0.533812 | 8.4:+71530499 | MS.gene81044:CDS |
| GTAAGCAGCAGCCTCTGCAC+TGG | 0.537932 | 8.4:-71532480 | None:intergenic |
| TGGGTACAAGTGTTAGCCGT+AGG | 0.538929 | 8.4:+71532061 | MS.gene81044:CDS |
| AACTAATAGTTTGTCCAGAA+GGG | 0.539419 | 8.4:-71530267 | None:intergenic |
| AATTTACAGGAATACTGTAA+TGG | 0.540802 | 8.4:+71528045 | MS.gene81044:CDS |
| ATGTGGTGACTTGGATGTTG+AGG | 0.541509 | 8.4:+71530508 | MS.gene81044:CDS |
| CAGGCTGGTTCTAGGTGACC+AGG | 0.542457 | 8.4:+71529893 | MS.gene81044:CDS |
| ACAAGGTTCTGCTAAACCAT+TGG | 0.545268 | 8.4:+71534353 | MS.gene81044:CDS |
| GCTTTCACCAGCAGCAGCCG+CGG | 0.547349 | 8.4:-71532218 | None:intergenic |
| TGAATATCCTGAATATGAGC+AGG | 0.548573 | 8.4:+71531161 | MS.gene81044:CDS |
| AAGTAACGTCCACCTTGTGC+AGG | 0.548777 | 8.4:-71532838 | None:intergenic |
| TAGACAATTATATAAAGTGA+AGG | 0.550063 | 8.4:+71531191 | MS.gene81044:CDS |
| TAAATCCCCTGATGATGGAA+TGG | 0.550669 | 8.4:+71532791 | MS.gene81044:CDS |
| AAGTAATGAATGCGGACACC+AGG | 0.550979 | 8.4:+71529874 | MS.gene81044:CDS |
| TAGGAGCCCACCTTCCTCCA+TGG | 0.552048 | 8.4:-71530315 | None:intergenic |
| GATTCACGTATATCAAGTGT+TGG | 0.552442 | 8.4:+71527419 | MS.gene81044:CDS |
| ATTGCTTTCTGCTGAGCAGA+AGG | 0.554493 | 8.4:+71532758 | MS.gene81044:CDS |
| GCCAGATTTCTGATTCATCT+GGG | 0.555340 | 8.4:+71531314 | MS.gene81044:CDS |
| TACCTTCCATGGAGGAAGGT+GGG | 0.556270 | 8.4:+71530309 | MS.gene81044:CDS |
| CAGCTGCAGCAGCCACCCTA+CGG | 0.557577 | 8.4:-71532077 | None:intergenic |
| GCTAGAGATCTCCGAACTGT+AGG | 0.560698 | 8.4:+71530485 | MS.gene81044:CDS |
| CGGAGCAACAATGAAGACAT+TGG | 0.565132 | 8.4:-71534767 | None:intergenic |
| CTGGTCACCTAGAACCAGCC+TGG | 0.568405 | 8.4:-71529892 | None:intergenic |
| ACTTCCACATCAATAAACAT+TGG | 0.568426 | 8.4:-71529855 | None:intergenic |
| TCATCGATGTCAAGAATGAG+AGG | 0.569090 | 8.4:-71525376 | None:intergenic |
| AATGAATGCGGACACCAGGC+TGG | 0.570633 | 8.4:+71529878 | MS.gene81044:CDS |
| TTTGGCACATTCTGCCATTG+TGG | 0.570870 | 8.4:-71529377 | None:intergenic |
| AGTCACCACATCCTACAGTT+CGG | 0.571064 | 8.4:-71530496 | None:intergenic |
| TGTGGTGACTTGGATGTTGA+GGG | 0.572093 | 8.4:+71530509 | MS.gene81044:CDS |
| TTGAGGGAAAGATTTGTGCT+GGG | 0.572490 | 8.4:+71532042 | MS.gene81044:CDS |
| AGTCCTAATAATGTTGCTCG+TGG | 0.576648 | 8.4:+71529927 | MS.gene81044:CDS |
| TTCTCAACTTCAGGAAACAA+AGG | 0.579565 | 8.4:-71525634 | None:intergenic |
| GCAGCATGTGCACCATCCAC+AGG | 0.579600 | 8.4:-71532428 | None:intergenic |
| GAGAGGGAAGGAAGCAGCGG+AGG | 0.581601 | 8.4:-71525359 | None:intergenic |
| AATTTACCTTCCATGGAGGA+AGG | 0.581654 | 8.4:+71530305 | MS.gene81044:CDS |
| CTTTGCAATTCAGTTCAACA+GGG | 0.582185 | 8.4:+71529797 | MS.gene81044:intron |
| GTTAGTCAATATATAGCTGA+AGG | 0.582343 | 8.4:+71531979 | MS.gene81044:CDS |
| GATCTCCGAACTGTAGGATG+TGG | 0.583156 | 8.4:+71530491 | MS.gene81044:CDS |
| AGGTCTTCTAATTTGAACGA+TGG | 0.584353 | 8.4:-71525556 | None:intergenic |
| GGGTACAAGTGTTAGCCGTA+GGG | 0.584528 | 8.4:+71532062 | MS.gene81044:CDS |
| ATATAGCTGAAGGTCTTGAA+CGG | 0.587830 | 8.4:+71531989 | MS.gene81044:CDS |
| TATAACTGCACCATCAGCGG+TGG | 0.589728 | 8.4:+71527981 | MS.gene81044:CDS |
| CAACTGCAACTTCTAATCCC+CGG | 0.592935 | 8.4:-71528020 | None:intergenic |
| TTACCTTCCATGGAGGAAGG+TGG | 0.594101 | 8.4:+71530308 | MS.gene81044:CDS |
| CGGGAGCCATTCCATCATCA+GGG | 0.594514 | 8.4:-71532797 | None:intergenic |
| AGCCCACCTTCCTCCATGGA+AGG | 0.599178 | 8.4:-71530311 | None:intergenic |
| TGATGATAGCCGTGTTGCTG+AGG | 0.600567 | 8.4:+71527817 | MS.gene81044:CDS |
| ACGCACAAACTCTCCATACT+CGG | 0.602894 | 8.4:-71534601 | None:intergenic |
| AACTTCAGGAAACAAAGGAC+TGG | 0.603994 | 8.4:-71525629 | None:intergenic |
| CTGTTCAAGACTCTAAGCAT+CGG | 0.604463 | 8.4:+71526892 | MS.gene81044:CDS |
| TGCAGGCATTAGTTGGCCGG+TGG | 0.606547 | 8.4:-71532821 | None:intergenic |
| GCAGAGGCTGCTGCTTACAA+AGG | 0.607001 | 8.4:+71532485 | MS.gene81044:CDS |
| TTAGGGAAATCGCTTGCACA+AGG | 0.607632 | 8.4:+71534336 | MS.gene81044:intron |
| GTCCTAATAATGTTGCTCGT+GGG | 0.607795 | 8.4:+71529928 | MS.gene81044:CDS |
| ATCCTTGTGACTTGAAAACA+GGG | 0.615448 | 8.4:-71531139 | None:intergenic |
| AATGAGAGGGAAGGAAGCAG+CGG | 0.618027 | 8.4:-71525362 | None:intergenic |
| TACAGCAATGTCCAGTGCAG+AGG | 0.619762 | 8.4:+71532469 | MS.gene81044:CDS |
| TGGTATAACTGCACCATCAG+CGG | 0.620234 | 8.4:+71527978 | MS.gene81044:CDS |
| GGTCTTGAACGGGCTAGAGA+CGG | 0.622203 | 8.4:+71532000 | MS.gene81044:CDS |
| CAAATTAGAAGACCTTGAAG+CGG | 0.623512 | 8.4:+71525564 | MS.gene81044:CDS |
| GGAAATGCAACTGCGAGCCG+GGG | 0.626908 | 8.4:+71528003 | MS.gene81044:CDS |
| TAGATTTATTCAACTTCGGG+AGG | 0.627343 | 8.4:+71535120 | MS.gene81044:intron |
| AAAGATAGGAGATCATCTCC+AGG | 0.636715 | 8.4:+71527454 | MS.gene81044:CDS |
| TACAAGTGTTAGCCGTAGGG+TGG | 0.637190 | 8.4:+71532065 | MS.gene81044:CDS |
| TTAGAAGACCTTGAAGCGGA+AGG | 0.640761 | 8.4:+71525568 | MS.gene81044:CDS |
| TGTTGCCACATAATGTTGCA+TGG | 0.641848 | 8.4:-71529829 | None:intergenic |
| GGCCAACTAATGCCTGCACA+AGG | 0.644940 | 8.4:+71532826 | MS.gene81044:CDS |
| TTGAAGCAGCCTCAGCAACA+CGG | 0.645175 | 8.4:-71527826 | None:intergenic |
| CATCGATGTCAAGAATGAGA+GGG | 0.648376 | 8.4:-71525375 | None:intergenic |
| TGTGATTTCTTTGTACAGGG+AGG | 0.651555 | 8.4:-71529955 | None:intergenic |
| ATAACTGCACCATCAGCGGT+GGG | 0.654091 | 8.4:+71527982 | MS.gene81044:CDS |
| GAAAAGAGAATTGACCACAA+TGG | 0.656741 | 8.4:+71529363 | MS.gene81044:CDS |
| GATGTCAAGAATGAGAGGGA+AGG | 0.658525 | 8.4:-71525371 | None:intergenic |
| TATTGAAACTGTCATGGCTG+AGG | 0.659500 | 8.4:+71532520 | MS.gene81044:CDS |
| GCATTCGGAAAGATGCGCAA+AGG | 0.660387 | 8.4:+71534824 | MS.gene81044:CDS |
| TAATAGTTTGTCCAGAAGGG+CGG | 0.661141 | 8.4:-71530264 | None:intergenic |
| GAAGAAGATATTGGAAGACA+TGG | 0.664292 | 8.4:+71527958 | MS.gene81044:CDS |
| TCCCTGTACAAAGAAATCAC+AGG | 0.674837 | 8.4:+71529957 | MS.gene81044:CDS |
| TGTAGAAGAAATTACCTGTG+AGG | 0.676230 | 8.4:-71531455 | None:intergenic |
| GCATCGGAGGACACTAGCTG+AGG | 0.679017 | 8.4:+71526908 | MS.gene81044:CDS |
| TTCAAGACTCTAAGCATCGG+AGG | 0.680226 | 8.4:+71526895 | MS.gene81044:CDS |
| TTTGCAATTCAGTTCAACAG+GGG | 0.681285 | 8.4:+71529798 | MS.gene81044:intron |
| ACAGTGTATTGAAACTGTCA+TGG | 0.681812 | 8.4:+71532514 | MS.gene81044:CDS |
| GGGAGCCATTCCATCATCAG+GGG | 0.688385 | 8.4:-71532796 | None:intergenic |
| TGTAAATTTACCTTCCATGG+AGG | 0.688790 | 8.4:+71530301 | MS.gene81044:CDS |
| GGTTGTTTGAAAGCTTTGCG+AGG | 0.691348 | 8.4:+71527393 | MS.gene81044:CDS |
| TTGTAACAGAGTTTGTGCGT+TGG | 0.693074 | 8.4:+71531398 | MS.gene81044:CDS |
| AAAGCTCCATCAGGTCACCA+GGG | 0.716414 | 8.4:-71527781 | None:intergenic |
| TGATGTGGAAGTAATGAATG+CGG | 0.755616 | 8.4:+71529866 | MS.gene81044:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 71525304 | 71535192 | 71525304 | ID=MS.gene81044 |
| chr8.4 | mRNA | 71525304 | 71535192 | 71525304 | ID=MS.gene81044.t1;Parent=MS.gene81044 |
| chr8.4 | exon | 71525304 | 71525405 | 71525304 | ID=MS.gene81044.t1.exon1;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71525304 | 71525405 | 71525304 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71525505 | 71525711 | 71525505 | ID=MS.gene81044.t1.exon2;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71525505 | 71525711 | 71525505 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71526855 | 71526929 | 71526855 | ID=MS.gene81044.t1.exon3;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71526855 | 71526929 | 71526855 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71527374 | 71527475 | 71527374 | ID=MS.gene81044.t1.exon4;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71527374 | 71527475 | 71527374 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71527627 | 71527677 | 71527627 | ID=MS.gene81044.t1.exon5;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71527627 | 71527677 | 71527627 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71527758 | 71527863 | 71527758 | ID=MS.gene81044.t1.exon6;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71527758 | 71527863 | 71527758 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71527947 | 71528066 | 71527947 | ID=MS.gene81044.t1.exon7;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71527947 | 71528066 | 71527947 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71529320 | 71529411 | 71529320 | ID=MS.gene81044.t1.exon8;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71529320 | 71529411 | 71529320 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71529810 | 71529978 | 71529810 | ID=MS.gene81044.t1.exon9;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71529810 | 71529978 | 71529810 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71530057 | 71530133 | 71530057 | ID=MS.gene81044.t1.exon10;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71530057 | 71530133 | 71530057 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71530242 | 71530340 | 71530242 | ID=MS.gene81044.t1.exon11;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71530242 | 71530340 | 71530242 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71530440 | 71530530 | 71530440 | ID=MS.gene81044.t1.exon12;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71530440 | 71530530 | 71530440 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71531127 | 71531212 | 71531127 | ID=MS.gene81044.t1.exon13;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71531127 | 71531212 | 71531127 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71531292 | 71531462 | 71531292 | ID=MS.gene81044.t1.exon14;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71531292 | 71531462 | 71531292 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71531827 | 71531880 | 71531827 | ID=MS.gene81044.t1.exon15;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71531827 | 71531880 | 71531827 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71531979 | 71532107 | 71531979 | ID=MS.gene81044.t1.exon16;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71531979 | 71532107 | 71531979 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71532211 | 71532303 | 71532211 | ID=MS.gene81044.t1.exon17;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71532211 | 71532303 | 71532211 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71532395 | 71532541 | 71532395 | ID=MS.gene81044.t1.exon18;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71532395 | 71532541 | 71532395 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71532750 | 71532847 | 71532750 | ID=MS.gene81044.t1.exon19;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71532750 | 71532847 | 71532750 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71533521 | 71533605 | 71533521 | ID=MS.gene81044.t1.exon20;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71533521 | 71533605 | 71533521 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71534340 | 71534398 | 71534340 | ID=MS.gene81044.t1.exon21;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71534340 | 71534398 | 71534340 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71534572 | 71534670 | 71534572 | ID=MS.gene81044.t1.exon22;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71534572 | 71534670 | 71534572 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71534762 | 71534845 | 71534762 | ID=MS.gene81044.t1.exon23;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71534762 | 71534845 | 71534762 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| chr8.4 | exon | 71535123 | 71535192 | 71535123 | ID=MS.gene81044.t1.exon24;Parent=MS.gene81044.t1 |
| chr8.4 | CDS | 71535123 | 71535192 | 71535123 | ID=cds.MS.gene81044.t1;Parent=MS.gene81044.t1 |
| Gene Sequence |
| Protein sequence |
