Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82103.t1 | XP_003619849.1 | 97 | 333 | 10 | 0 | 1 | 333 | 1 | 333 | 2.50E-185 | 657.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82103.t1 | Q9SE51 | 62.7 | 284 | 102 | 2 | 54 | 333 | 71 | 354 | 8.3e-105 | 381.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82103.t1 | G7KQ87 | 97.0 | 333 | 10 | 0 | 1 | 333 | 1 | 333 | 1.8e-185 | 657.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057321 | MS.gene82103 | 0.804345 | 2.26E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55980 | MS.gene82103 | PPI |
| MS.gene67725 | MS.gene82103 | PPI |
| MS.gene82103 | MS.gene00146 | PPI |
| MS.gene82103 | MS.gene058245 | PPI |
| MS.gene65650 | MS.gene82103 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82103.t1 | MTR_6g069850 | 96.997 | 333 | 10 | 0 | 1 | 333 | 1 | 333 | 0.0 | 658 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82103.t1 | AT3G17910 | 62.153 | 288 | 105 | 2 | 50 | 333 | 67 | 354 | 4.99e-133 | 383 |
| MS.gene82103.t1 | AT1G48510 | 38.344 | 326 | 174 | 8 | 24 | 330 | 21 | 338 | 9.00e-65 | 209 |
| MS.gene82103.t1 | AT1G48510 | 37.730 | 326 | 177 | 8 | 24 | 330 | 21 | 339 | 1.13e-64 | 209 |
| MS.gene82103.t1 | AT1G48510 | 38.344 | 326 | 172 | 9 | 24 | 330 | 21 | 336 | 1.49e-64 | 209 |
| MS.gene82103.t1 | AT1G48510 | 40.873 | 252 | 131 | 5 | 92 | 330 | 1 | 247 | 2.20e-58 | 190 |
Find 107 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAATCGTGGTGGAGATTT+TGG | 0.125508 | 6.1:+63652720 | MS.gene82103:CDS |
| TTCTGCAGCAGTTACATTTA+TGG | 0.156595 | 6.1:+63653827 | MS.gene82103:CDS |
| ATTTCAGGAGTTACTGAAAA+TGG | 0.240801 | 6.1:+63651867 | MS.gene82103:CDS |
| GCGGAGCTCCGCGAGGATTC+TGG | 0.267249 | 6.1:-63649060 | None:intergenic |
| CCACGTTCAAGAAGCATTTC+AGG | 0.288011 | 6.1:+63651852 | MS.gene82103:CDS |
| TGAAAGGAAAAGCTTCTAAA+TGG | 0.296461 | 6.1:+63649319 | MS.gene82103:intron |
| CATCCTCTGTTAACTAGAAT+TGG | 0.310516 | 6.1:-63652605 | None:intergenic |
| GAGCAATTGCATTTGGTCTT+GGG | 0.332922 | 6.1:+63649358 | MS.gene82103:CDS |
| ACTACCCCAACCACTTTGTT+AGG | 0.334533 | 6.1:-63653072 | None:intergenic |
| GGAGCAATTGCATTTGGTCT+TGG | 0.353787 | 6.1:+63649357 | MS.gene82103:CDS |
| GCGGAGTTGGATGGTGGCAT+TGG | 0.353910 | 6.1:-63649035 | None:intergenic |
| GAATCTAACTCCTCACTTGA+TGG | 0.362923 | 6.1:-63651765 | None:intergenic |
| CCAAAATCTCCACCACGATT+TGG | 0.379618 | 6.1:-63652720 | None:intergenic |
| CTACCTGGAGCAATTGCATT+TGG | 0.396302 | 6.1:+63649351 | MS.gene82103:CDS |
| TTCTGGAAGGCCGCAAGATC+GGG | 0.402652 | 6.1:-63653181 | None:intergenic |
| GGAAGAGGGTAAGGATTACT+TGG | 0.403772 | 6.1:-63653243 | None:intergenic |
| AAGTGAGGAGTTAGATTCTC+TGG | 0.408874 | 6.1:+63651770 | MS.gene82103:CDS |
| TAATGCCTTGATTCGAAGTT+CGG | 0.411268 | 6.1:+63653275 | MS.gene82103:CDS |
| ACCATGTTAATATGTAGTTT+AGG | 0.414596 | 6.1:-63653314 | None:intergenic |
| GAAGACCCGGGATCATTTGC+AGG | 0.418767 | 6.1:-63653126 | None:intergenic |
| TTGCATTTGGTCTTGGGAGT+TGG | 0.438591 | 6.1:+63649364 | MS.gene82103:CDS |
| AATGTTACAGATTAAAATGT+TGG | 0.450134 | 6.1:+63651689 | MS.gene82103:intron |
| CAATTCTAGTTAACAGAGGA+TGG | 0.450262 | 6.1:+63652606 | MS.gene82103:CDS |
| ATGATTTAGATTTACCTGTC+AGG | 0.450747 | 6.1:-63651930 | None:intergenic |
| GAGGATTCTGGCGGCGGAGT+TGG | 0.453922 | 6.1:-63649048 | None:intergenic |
| TAACACCTAACAAAGTGGTT+GGG | 0.455811 | 6.1:+63653067 | MS.gene82103:CDS |
| TTGCAGGAACAAATATGCTT+GGG | 0.457855 | 6.1:-63653110 | None:intergenic |
| TTTGCAGGAACAAATATGCT+TGG | 0.461261 | 6.1:-63653111 | None:intergenic |
| TATGCACCACTGAATTTCAA+TGG | 0.468291 | 6.1:-63651741 | None:intergenic |
| TTTCTGGAAGGCCGCAAGAT+CGG | 0.468311 | 6.1:-63653182 | None:intergenic |
| TGATCATGAACTGGCATAAG+AGG | 0.470339 | 6.1:-63651906 | None:intergenic |
| AGATTCTCTGGAATTTAGAA+AGG | 0.476299 | 6.1:+63651782 | MS.gene82103:CDS |
| TTTGTTCCTGCAAATGATCC+CGG | 0.482771 | 6.1:+63653120 | MS.gene82103:CDS |
| TCTTCTTCCTCCGATTCAAA+TGG | 0.486388 | 6.1:+63649167 | MS.gene82103:CDS |
| TGCCGGTGCGGGTGGAGATA+CGG | 0.487530 | 6.1:-63649082 | None:intergenic |
| CGCCGTATCTCCACCCGCAC+CGG | 0.488507 | 6.1:+63649080 | MS.gene82103:CDS |
| GATTGTTAGAAGAGAAGATA+AGG | 0.489684 | 6.1:+63649389 | MS.gene82103:CDS |
| CTGTCAGGATGATCATGAAC+TGG | 0.492334 | 6.1:-63651915 | None:intergenic |
| AGTGGAGCTTATGCCGGTGC+GGG | 0.493648 | 6.1:-63649093 | None:intergenic |
| GCTTGTGAAGGCGAAGGAAG+TGG | 0.494827 | 6.1:-63652689 | None:intergenic |
| GAGGATGGGTTCCCCGCAGT+TGG | 0.495591 | 6.1:+63652621 | MS.gene82103:CDS |
| CCGCAAGATCGGGCAATGCT+AGG | 0.495974 | 6.1:-63653171 | None:intergenic |
| TGAGTGCTTACCATTTGAAT+CGG | 0.500805 | 6.1:-63649177 | None:intergenic |
| TCGAAGTTCGGTGATGCCTC+AGG | 0.503538 | 6.1:+63653287 | MS.gene82103:CDS |
| ACGGCAGCAGCGGAGCTGAA+TGG | 0.506928 | 6.1:-63649122 | None:intergenic |
| CTCCGCGAGGATTCTGGCGG+CGG | 0.511589 | 6.1:-63649054 | None:intergenic |
| CCTTCGCCTTCACAAGCTGA+TGG | 0.512078 | 6.1:+63652695 | MS.gene82103:CDS |
| GGAGCTTATGCCGGTGCGGG+TGG | 0.514671 | 6.1:-63649090 | None:intergenic |
| ATTCTGGCGGCGGAGTTGGA+TGG | 0.515747 | 6.1:-63649044 | None:intergenic |
| TCGAGGGAAGAGGTTGCAAA+TGG | 0.520408 | 6.1:+63651716 | MS.gene82103:CDS |
| CGGAGGAAGAAGAAAGTGTT+GGG | 0.522263 | 6.1:-63649157 | None:intergenic |
| ATCAAGGCATTAACATCCTT+AGG | 0.523796 | 6.1:-63653264 | None:intergenic |
| CATCACCGAACTTCGAATCA+AGG | 0.533561 | 6.1:-63653280 | None:intergenic |
| AGACCAAATGCAATTGCTCC+AGG | 0.535961 | 6.1:-63649354 | None:intergenic |
| GCATTAACATCCTTAGGAAG+AGG | 0.537524 | 6.1:-63653258 | None:intergenic |
| ATTAAAATGTTGGAGTATCG+AGG | 0.541307 | 6.1:+63651699 | MS.gene82103:CDS |
| CTTTGTTAGGTGTTACAGAC+GGG | 0.541494 | 6.1:-63653059 | None:intergenic |
| ACATCCTTAGGAAGAGGGTA+AGG | 0.544644 | 6.1:-63653252 | None:intergenic |
| ATTTAGAAAGGTTGTCTGCA+AGG | 0.547498 | 6.1:+63651794 | MS.gene82103:CDS |
| AAATGGTGGTTGTATCTACC+TGG | 0.550366 | 6.1:+63649336 | MS.gene82103:CDS |
| TTGTTCCTGCAAATGATCCC+GGG | 0.561035 | 6.1:+63653121 | MS.gene82103:CDS |
| TAATCCTTACCCTCTTCCTA+AGG | 0.561040 | 6.1:+63653248 | MS.gene82103:CDS |
| TTTAGAAAGGTTGTCTGCAA+GGG | 0.561782 | 6.1:+63651795 | MS.gene82103:CDS |
| CTGGCGGCGGAGTTGGATGG+TGG | 0.564227 | 6.1:-63649041 | None:intergenic |
| AAAGTGGTTGGGGTAGTTCG+CGG | 0.567812 | 6.1:+63653078 | MS.gene82103:CDS |
| TGTTGGAGTATCGAGGGAAG+AGG | 0.567895 | 6.1:+63651706 | MS.gene82103:CDS |
| CCTAGCATTGCCCGATCTTG+CGG | 0.570187 | 6.1:+63653171 | MS.gene82103:CDS |
| CAGTTCATGATCATCCTGAC+AGG | 0.571970 | 6.1:+63651916 | MS.gene82103:CDS |
| ACGGACAGTGGAGCTTATGC+CGG | 0.572072 | 6.1:-63649099 | None:intergenic |
| TTGGTTCCATCAGCTTGTGA+AGG | 0.572917 | 6.1:-63652701 | None:intergenic |
| TCGGAGGAAGAAGAAAGTGT+TGG | 0.577887 | 6.1:-63649158 | None:intergenic |
| GTAACACCTAACAAAGTGGT+TGG | 0.578249 | 6.1:+63653066 | MS.gene82103:CDS |
| CATTAACATCCTTAGGAAGA+GGG | 0.579056 | 6.1:-63653257 | None:intergenic |
| TAGGTGTTACAGACGGGACC+TGG | 0.581072 | 6.1:-63653053 | None:intergenic |
| AATTCTAGTTAACAGAGGAT+GGG | 0.581794 | 6.1:+63652607 | MS.gene82103:CDS |
| TTACATTTATGGCTTTCAAG+AGG | 0.585665 | 6.1:+63653838 | MS.gene82103:CDS |
| AACACCTAACAAAGTGGTTG+GGG | 0.588184 | 6.1:+63653068 | MS.gene82103:CDS |
| GGAATCAGAGACGGCAGCAG+CGG | 0.591224 | 6.1:-63649132 | None:intergenic |
| CAGTGGAGCTTATGCCGGTG+CGG | 0.598216 | 6.1:-63649094 | None:intergenic |
| CAGCAGCGGAGCTGAATGGA+CGG | 0.599068 | 6.1:-63649118 | None:intergenic |
| GTCTGTAACACCTAACAAAG+TGG | 0.600629 | 6.1:+63653062 | MS.gene82103:CDS |
| GGCTAAGACAGAGTAACAAG+AGG | 0.601471 | 6.1:+63653859 | MS.gene82103:CDS |
| GGAAGAAGAAAGTGTTGGGT+CGG | 0.602196 | 6.1:-63649153 | None:intergenic |
| TTAAAATGTTGGAGTATCGA+GGG | 0.604898 | 6.1:+63651700 | MS.gene82103:CDS |
| ATGTTAATATGTAGTTTAGG+TGG | 0.606805 | 6.1:-63653311 | None:intergenic |
| ACTTTGTTAGGTGTTACAGA+CGG | 0.608168 | 6.1:-63653060 | None:intergenic |
| CCTGAAATGCTTCTTGAACG+TGG | 0.609460 | 6.1:-63651852 | None:intergenic |
| CCATCAGCTTGTGAAGGCGA+AGG | 0.611701 | 6.1:-63652695 | None:intergenic |
| ATAGAACCACTGAGAAGACC+CGG | 0.614508 | 6.1:-63653139 | None:intergenic |
| GTGCTTACCATTTGAATCGG+AGG | 0.618003 | 6.1:-63649174 | None:intergenic |
| ATGGAACCATTGAAATTCAG+TGG | 0.619217 | 6.1:+63651735 | MS.gene82103:CDS |
| ACCTAAACTACATATTAACA+TGG | 0.626458 | 6.1:+63653313 | MS.gene82103:CDS |
| TGTTGGGTCGGAATCAGAGA+CGG | 0.630196 | 6.1:-63649141 | None:intergenic |
| AAGGAAAAGCTTCTAAATGG+TGG | 0.634466 | 6.1:+63649322 | MS.gene82103:intron |
| GAGCTCCGCGAGGATTCTGG+CGG | 0.639380 | 6.1:-63649057 | None:intergenic |
| GGAGCTGAATGGACGGACAG+TGG | 0.647696 | 6.1:-63649111 | None:intergenic |
| ATGTAGTTTAGGTGGTCCTG+AGG | 0.656016 | 6.1:-63653303 | None:intergenic |
| ATGATCCCGGGTCTTCTCAG+TGG | 0.657512 | 6.1:+63653133 | MS.gene82103:CDS |
| AAGCTGATGGAACCAAATCG+TGG | 0.670751 | 6.1:+63652708 | MS.gene82103:CDS |
| TCTCCAATTCTAGTTAACAG+AGG | 0.674448 | 6.1:+63652602 | MS.gene82103:CDS |
| CTCCGCCGCCAGAATCCTCG+CGG | 0.684824 | 6.1:+63649052 | MS.gene82103:CDS |
| TGGTGCATATCCATCAAGTG+AGG | 0.687984 | 6.1:+63651755 | MS.gene82103:CDS |
| CTGATGGAACCAAATCGTGG+TGG | 0.697330 | 6.1:+63652711 | MS.gene82103:CDS |
| TAGAACCACTGAGAAGACCC+GGG | 0.697971 | 6.1:-63653138 | None:intergenic |
| TAAAGAGTCTGTTATCAGTG+AGG | 0.699472 | 6.1:+63652745 | MS.gene82103:CDS |
| CGGTGCGGGTGGAGATACGG+CGG | 0.717755 | 6.1:-63649079 | None:intergenic |
| AGATACGGCGGAGCTCCGCG+AGG | 0.770953 | 6.1:-63649067 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATCTCTATAATTATATT+AGG | + | chr6.1:63649642-63649661 | MS.gene82103:intron | 10.0% |
| !!! | AAAAAATGAACTTTTTTTTA+AGG | - | chr6.1:63649264-63649283 | None:intergenic | 10.0% |
| !!! | AAAAATGAACTTTTTTTTAA+GGG | - | chr6.1:63649263-63649282 | None:intergenic | 10.0% |
| !!! | AATATTACATCTTTTATTTT+AGG | - | chr6.1:63653657-63653676 | None:intergenic | 10.0% |
| !!! | TAATTTTCTTAAATAATTAC+CGG | - | chr6.1:63649743-63649762 | None:intergenic | 10.0% |
| !! | AAAATGAATTGTTTGTATTT+GGG | + | chr6.1:63653791-63653810 | MS.gene82103:intron | 15.0% |
| !! | AACCTTAACATTAATAAAAA+TGG | + | chr6.1:63653751-63653770 | MS.gene82103:intron | 15.0% |
| !! | ATTCAATTCATTATAACTAT+CGG | + | chr6.1:63649451-63649470 | MS.gene82103:intron | 15.0% |
| !! | GAATAAAAAAAATTAGTGAA+AGG | + | chr6.1:63653596-63653615 | MS.gene82103:intron | 15.0% |
| !! | TTAAACAATAAATGATATGA+TGG | - | chr6.1:63652795-63652814 | None:intergenic | 15.0% |
| !! | TTAACATTAATAAAAATGGT+TGG | + | chr6.1:63653755-63653774 | MS.gene82103:intron | 15.0% |
| !!! | AACCATTTTTATTAATGTTA+AGG | - | chr6.1:63653756-63653775 | None:intergenic | 15.0% |
| !!! | AACTATGTTTATATTGTTTT+TGG | + | chr6.1:63650922-63650941 | MS.gene82103:intron | 15.0% |
| !!! | AATGTTAATTGATTTGTTTT+TGG | + | chr6.1:63649288-63649307 | MS.gene82103:intron | 15.0% |
| !!! | ATTGATTTTGATTATAAGAA+AGG | + | chr6.1:63650445-63650464 | MS.gene82103:intron | 15.0% |
| !!! | GTTTTTTTTTTTTTTTTTGG+TGG | + | chr6.1:63649763-63649782 | MS.gene82103:intron | 15.0% |
| !!! | TTGATTTTGATTATAAGAAA+GGG | + | chr6.1:63650446-63650465 | MS.gene82103:intron | 15.0% |
| !! | AATGTTACAGATTAAAATGT+TGG | + | chr6.1:63651689-63651708 | MS.gene82103:intron | 20.0% |
| !! | ATAGCAGTAAATTTAAAAGA+TGG | - | chr6.1:63651272-63651291 | None:intergenic | 20.0% |
| !! | ATATGAAAATTGAAGAAACT+CGG | - | chr6.1:63652556-63652575 | None:intergenic | 20.0% |
| !! | ATATGTAAACAAACAACTTA+TGG | + | chr6.1:63651574-63651593 | MS.gene82103:intron | 20.0% |
| !! | CAAAATGAATTGTTTGTATT+TGG | + | chr6.1:63653790-63653809 | MS.gene82103:intron | 20.0% |
| !! | GATAAAAAATCAATCTATGT+GGG | + | chr6.1:63651828-63651847 | MS.gene82103:CDS | 20.0% |
| !! | GATAGTTATAATGAATTGAA+TGG | - | chr6.1:63649452-63649471 | None:intergenic | 20.0% |
| !! | GTATTTAGGAAAAATATGTT+TGG | + | chr6.1:63649931-63649950 | MS.gene82103:intron | 20.0% |
| !! | TATTTATATTTCAGTTTCAC+TGG | + | chr6.1:63652348-63652367 | MS.gene82103:intron | 20.0% |
| !! | TGATAAAAAATCAATCTATG+TGG | + | chr6.1:63651827-63651846 | MS.gene82103:CDS | 20.0% |
| !! | TTAAAACTAGGGATTATAAT+AGG | + | chr6.1:63649980-63649999 | MS.gene82103:intron | 20.0% |
| !!! | AATTTTATTCCTAGGTATTT+AGG | + | chr6.1:63649917-63649936 | MS.gene82103:intron | 20.0% |
| !!! | AGTTTACTAAATTTTATTCC+CGG | - | chr6.1:63650099-63650118 | None:intergenic | 20.0% |
| !!! | TATTATAATCCCTAGTTTTA+AGG | - | chr6.1:63649981-63650000 | None:intergenic | 20.0% |
| !!! | TGATTTTGATTATAAGAAAG+GGG | + | chr6.1:63650447-63650466 | MS.gene82103:intron | 20.0% |
| !!! | TTAATTGATTTGTTTTTGGT+TGG | + | chr6.1:63649292-63649311 | MS.gene82103:intron | 20.0% |
| ! | AACAATAAACATCAGAAAGT+TGG | - | chr6.1:63652239-63652258 | None:intergenic | 25.0% |
| ! | AAGTTATAATTGTAGATTCC+TGG | - | chr6.1:63650162-63650181 | None:intergenic | 25.0% |
| ! | AATCAAATAATGAAGATCGA+CGG | - | chr6.1:63650805-63650824 | None:intergenic | 25.0% |
| ! | AATGAATTGAATGGCAAAAA+TGG | - | chr6.1:63649443-63649462 | None:intergenic | 25.0% |
| ! | AATTTGATAAATTCCTCATG+CGG | + | chr6.1:63649208-63649227 | MS.gene82103:intron | 25.0% |
| ! | ACATGATTTATTGCAAATTG+CGG | + | chr6.1:63650599-63650618 | MS.gene82103:intron | 25.0% |
| ! | ACCATGTTAATATGTAGTTT+AGG | - | chr6.1:63653317-63653336 | None:intergenic | 25.0% |
| ! | ACCTAAACTACATATTAACA+TGG | + | chr6.1:63653313-63653332 | MS.gene82103:CDS | 25.0% |
| ! | AGAATTATGTCAGTGAAAAT+TGG | + | chr6.1:63650496-63650515 | MS.gene82103:intron | 25.0% |
| ! | AGTAAACTTGTAACAAACAT+AGG | + | chr6.1:63650111-63650130 | MS.gene82103:intron | 25.0% |
| ! | AGTTATAATTGTAGATTCCT+GGG | - | chr6.1:63650161-63650180 | None:intergenic | 25.0% |
| ! | AGTTTACCAAATTTATTCCT+AGG | + | chr6.1:63649865-63649884 | MS.gene82103:intron | 25.0% |
| ! | ATGTTAATATGTAGTTTAGG+TGG | - | chr6.1:63653314-63653333 | None:intergenic | 25.0% |
| ! | ATTATCTTCATTTGTTCTGA+AGG | + | chr6.1:63652274-63652293 | MS.gene82103:intron | 25.0% |
| ! | ATTCCTTGGAATATAAAGAT+GGG | + | chr6.1:63649894-63649913 | MS.gene82103:intron | 25.0% |
| ! | CAGAGTTCAAATATATTAAG+TGG | - | chr6.1:63650706-63650725 | None:intergenic | 25.0% |
| ! | CTTAATGCATCAAAAACTTA+TGG | - | chr6.1:63651221-63651240 | None:intergenic | 25.0% |
| ! | GTGAAAATTGGATACAAATT+TGG | + | chr6.1:63650508-63650527 | MS.gene82103:intron | 25.0% |
| ! | GTTAACCTTATAATATTCCA+AGG | + | chr6.1:63649953-63649972 | MS.gene82103:intron | 25.0% |
| ! | GTTATTCCTAGGAATAAATT+TGG | - | chr6.1:63649874-63649893 | None:intergenic | 25.0% |
| ! | TAATCTGTAACATTGTAAGA+TGG | - | chr6.1:63651683-63651702 | None:intergenic | 25.0% |
| ! | TATCTAGATCACTAACATAA+CGG | - | chr6.1:63651194-63651213 | None:intergenic | 25.0% |
| ! | TTCTCAGAATCAAAATTTCA+GGG | - | chr6.1:63650197-63650216 | None:intergenic | 25.0% |
| ! | TTTCTCAGAATCAAAATTTC+AGG | - | chr6.1:63650198-63650217 | None:intergenic | 25.0% |
| !! | AATTTTCCCAAAGAAAATGA+TGG | - | chr6.1:63650050-63650069 | None:intergenic | 25.0% |
| !! | ATTTTCCCAAAGAAAATGAT+GGG | - | chr6.1:63650049-63650068 | None:intergenic | 25.0% |
| !! | CACTTAAACTTTATGACTTT+TGG | + | chr6.1:63652036-63652055 | MS.gene82103:intron | 25.0% |
| !! | CATAAGTTTTTGATGCATTA+AGG | + | chr6.1:63651219-63651238 | MS.gene82103:intron | 25.0% |
| !! | CATATTTTTCCTAAATACCT+AGG | - | chr6.1:63649929-63649948 | None:intergenic | 25.0% |
| !! | GTTTACTAAATTTTATTCCC+GGG | - | chr6.1:63650098-63650117 | None:intergenic | 25.0% |
| !! | GTTTTTATGATTTTATTCCC+AGG | + | chr6.1:63650141-63650160 | MS.gene82103:intron | 25.0% |
| !! | TTATTCCCATCATTTTCTTT+GGG | + | chr6.1:63650041-63650060 | MS.gene82103:intron | 25.0% |
| !! | TTTATTCCCATCATTTTCTT+TGG | + | chr6.1:63650040-63650059 | MS.gene82103:intron | 25.0% |
| !!! | AAATTTTGATTCTGAGAAAG+GGG | + | chr6.1:63650199-63650218 | MS.gene82103:intron | 25.0% |
| !!! | ATTTTGATTATAAGAAAGGG+GGG | + | chr6.1:63650449-63650468 | MS.gene82103:intron | 25.0% |
| !!! | GAAATTTTGATTCTGAGAAA+GGG | + | chr6.1:63650198-63650217 | MS.gene82103:intron | 25.0% |
| !!! | GATTTTGATTATAAGAAAGG+GGG | + | chr6.1:63650448-63650467 | MS.gene82103:intron | 25.0% |
| !!! | TGAAATTTTGATTCTGAGAA+AGG | + | chr6.1:63650197-63650216 | MS.gene82103:intron | 25.0% |
| !!! | TTGGAAAGAAAAGTTTTTAG+AGG | + | chr6.1:63652640-63652659 | MS.gene82103:CDS | 25.0% |
| AAATTCTCAGTCATAAGTAG+TGG | - | chr6.1:63653718-63653737 | None:intergenic | 30.0% | |
| AAATTGAGCTCTTTACCAAA+AGG | - | chr6.1:63651448-63651467 | None:intergenic | 30.0% | |
| AACACCTATGATCGAAAATT+TGG | + | chr6.1:63650378-63650397 | MS.gene82103:intron | 30.0% | |
| AATGACTTAGTCTACAAACT+TGG | + | chr6.1:63651011-63651030 | MS.gene82103:intron | 30.0% | |
| ACTGGATTCTCGAATTTAAA+AGG | + | chr6.1:63652366-63652385 | MS.gene82103:intron | 30.0% | |
| AGATTAATTCTATGCATCGA+CGG | - | chr6.1:63649629-63649648 | None:intergenic | 30.0% | |
| AGGTTCCTTGGAATATTATA+AGG | - | chr6.1:63649961-63649980 | None:intergenic | 30.0% | |
| AGTTTCTCACTTCATCAATA+TGG | - | chr6.1:63650771-63650790 | None:intergenic | 30.0% | |
| ATCAAATAATGAAGATCGAC+GGG | - | chr6.1:63650804-63650823 | None:intergenic | 30.0% | |
| ATGATTTAGATTTACCTGTC+AGG | - | chr6.1:63651933-63651952 | None:intergenic | 30.0% | |
| ATGTATCCACTTAAATCATG+CGG | + | chr6.1:63649514-63649533 | MS.gene82103:intron | 30.0% | |
| ATTCCCATCTTTATATTCCA+AGG | - | chr6.1:63649900-63649919 | None:intergenic | 30.0% | |
| ATTTCAGGAGTTACTGAAAA+TGG | + | chr6.1:63651867-63651886 | MS.gene82103:CDS | 30.0% | |
| ATTTGATAAATTCCTCATGC+GGG | + | chr6.1:63649209-63649228 | MS.gene82103:intron | 30.0% | |
| CAGAAATATTGTCGTTACTA+AGG | - | chr6.1:63650848-63650867 | None:intergenic | 30.0% | |
| CATTCCTTGGAATATAAAGA+TGG | + | chr6.1:63649893-63649912 | MS.gene82103:intron | 30.0% | |
| GAAAATTGGTTGACATTTGT+CGG | + | chr6.1:63649795-63649814 | MS.gene82103:intron | 30.0% | |
| GATATTTGTGGAGCTAATTT+AGG | + | chr6.1:63649542-63649561 | MS.gene82103:intron | 30.0% | |
| GATTGTTAGAAGAGAAGATA+AGG | + | chr6.1:63649389-63649408 | MS.gene82103:CDS | 30.0% | |
| GCAATGTTTCAAAATCAAAC+CGG | - | chr6.1:63653004-63653023 | None:intergenic | 30.0% | |
| GGTGGTGAATTTAAGAAAAT+TGG | + | chr6.1:63649781-63649800 | MS.gene82103:intron | 30.0% | |
| TACAGATCCTTATTCTTTCT+TGG | + | chr6.1:63653408-63653427 | MS.gene82103:intron | 30.0% | |
| TAGTGGAAAATATGTGAATG+CGG | + | chr6.1:63650887-63650906 | MS.gene82103:intron | 30.0% | |
| TCATTAGCCAAGAAAGAATA+AGG | - | chr6.1:63653418-63653437 | None:intergenic | 30.0% | |
| TCATTGTATTGTTCTGTTTC+TGG | + | chr6.1:63653676-63653695 | MS.gene82103:intron | 30.0% | |
| TGAAAGGAAAAGCTTCTAAA+TGG | + | chr6.1:63649319-63649338 | MS.gene82103:intron | 30.0% | |
| TGTTTACATATTATTCTGCC+AGG | - | chr6.1:63651565-63651584 | None:intergenic | 30.0% | |
| TTACATTTATGGCTTTCAAG+AGG | + | chr6.1:63653838-63653857 | MS.gene82103:CDS | 30.0% | |
| TTCTCGAATTTAAAAGGCTT+TGG | + | chr6.1:63652372-63652391 | MS.gene82103:intron | 30.0% | |
| TTTAAGCCATCTACATATCA+AGG | - | chr6.1:63651395-63651414 | None:intergenic | 30.0% | |
| ! | AAAACTTTTCTTTCCAACTG+CGG | - | chr6.1:63652637-63652656 | None:intergenic | 30.0% |
| ! | AAATTGTTGTTCTGTGTTTG+TGG | + | chr6.1:63650975-63650994 | MS.gene82103:intron | 30.0% |
| ! | AAGATGGGAATTTTATTCCT+AGG | + | chr6.1:63649909-63649928 | MS.gene82103:intron | 30.0% |
| ! | AATTCTAGTTAACAGAGGAT+GGG | + | chr6.1:63652607-63652626 | MS.gene82103:CDS | 30.0% |
| ! | ATTTTCCACTAGATCTGAAT+TGG | - | chr6.1:63650878-63650897 | None:intergenic | 30.0% |
| ! | GAACTTTACGTTTTTCCTTT+TGG | + | chr6.1:63652296-63652315 | MS.gene82103:intron | 30.0% |
| ! | GATGTTTTCATAATCTATCC+TGG | + | chr6.1:63651544-63651563 | MS.gene82103:intron | 30.0% |
| ! | TATGATGGAAAAATGACTAG+AGG | - | chr6.1:63652780-63652799 | None:intergenic | 30.0% |
| ! | TCAACATAGACAGTATTTTC+TGG | - | chr6.1:63653201-63653220 | None:intergenic | 30.0% |
| ! | TTGTGTTTTGCATACTATGA+TGG | + | chr6.1:63652131-63652150 | MS.gene82103:intron | 30.0% |
| !! | AGATTCTCTGGAATTTAGAA+AGG | + | chr6.1:63651782-63651801 | MS.gene82103:CDS | 30.0% |
| !! | ATTAAAATGTTGGAGTATCG+AGG | + | chr6.1:63651699-63651718 | MS.gene82103:CDS | 30.0% |
| !! | CCTAGTTTTTGTAAAAGATG+GGG | + | chr6.1:63653564-63653583 | MS.gene82103:intron | 30.0% |
| !! | GCCTAGTTTTTGTAAAAGAT+GGG | + | chr6.1:63653563-63653582 | MS.gene82103:intron | 30.0% |
| !! | TACGTTTTTCCTTTTGGTTA+AGG | + | chr6.1:63652302-63652321 | MS.gene82103:intron | 30.0% |
| !! | TCGAAAATTTGGTGCTATTT+AGG | + | chr6.1:63650389-63650408 | MS.gene82103:intron | 30.0% |
| !! | TTAAAATGTTGGAGTATCGA+GGG | + | chr6.1:63651700-63651719 | MS.gene82103:CDS | 30.0% |
| !! | TTACTATGTTGACTGTTTTG+TGG | + | chr6.1:63652096-63652115 | MS.gene82103:intron | 30.0% |
| !!! | AATTTTGATTCTGAGAAAGG+GGG | + | chr6.1:63650200-63650219 | MS.gene82103:intron | 30.0% |
| !!! | AGAATTTTTTGTGTGCCTTT+TGG | + | chr6.1:63651430-63651449 | MS.gene82103:intron | 30.0% |
| !!! | GTTTTTGGTTGGTTTATGAA+AGG | + | chr6.1:63649303-63649322 | MS.gene82103:intron | 30.0% |
| AAGGAAAAGCTTCTAAATGG+TGG | + | chr6.1:63649322-63649341 | MS.gene82103:intron | 35.0% | |
| AATAAAGTTCCCATGGAGAT+GGG | - | chr6.1:63650026-63650045 | None:intergenic | 35.0% | |
| ATAAATATTGAGCCGCAAGA+AGG | - | chr6.1:63652335-63652354 | None:intergenic | 35.0% | |
| ATGACTAGAAATCTCCTTGA+TGG | - | chr6.1:63651337-63651356 | None:intergenic | 35.0% | |
| ATGGAACCATTGAAATTCAG+TGG | + | chr6.1:63651735-63651754 | MS.gene82103:CDS | 35.0% | |
| ATTTAGAAAGGTTGTCTGCA+AGG | + | chr6.1:63651794-63651813 | MS.gene82103:CDS | 35.0% | |
| CATCCTCTGTTAACTAGAAT+TGG | - | chr6.1:63652608-63652627 | None:intergenic | 35.0% | |
| CATTAACATCCTTAGGAAGA+GGG | - | chr6.1:63653260-63653279 | None:intergenic | 35.0% | |
| CCATCTACATATCAAGGAAA+CGG | - | chr6.1:63651389-63651408 | None:intergenic | 35.0% | |
| CGACATAGCATAGTGTAATT+TGG | + | chr6.1:63650553-63650572 | MS.gene82103:intron | 35.0% | |
| CGCTACATAAACTCGATTTA+CGG | + | chr6.1:63652164-63652183 | MS.gene82103:intron | 35.0% | |
| CTATAAGTATAAGCATGCGT+CGG | - | chr6.1:63653507-63653526 | None:intergenic | 35.0% | |
| GGGAATAATCCTTAACCAAA+AGG | - | chr6.1:63652314-63652333 | None:intergenic | 35.0% | |
| GTACAACCAACTCAAAAACA+TGG | - | chr6.1:63652525-63652544 | None:intergenic | 35.0% | |
| TAAAGAGTCTGTTATCAGTG+AGG | + | chr6.1:63652745-63652764 | MS.gene82103:CDS | 35.0% | |
| TAAATATTGAGCCGCAAGAA+GGG | - | chr6.1:63652334-63652353 | None:intergenic | 35.0% | |
| TAACACCTAACAAAGTGGTT+GGG | + | chr6.1:63653067-63653086 | MS.gene82103:CDS | 35.0% | |
| TAAGGATTATTCCCTTCTTG+CGG | + | chr6.1:63652320-63652339 | MS.gene82103:intron | 35.0% | |
| TATGCACCACTGAATTTCAA+TGG | - | chr6.1:63651744-63651763 | None:intergenic | 35.0% | |
| TCACCATTACTTCAGATTGA+AGG | + | chr6.1:63653446-63653465 | MS.gene82103:intron | 35.0% | |
| TCCAAGGAACCTTAAAACTA+GGG | + | chr6.1:63649969-63649988 | MS.gene82103:intron | 35.0% | |
| TCTTAAGTCTTAACCCATCA+AGG | + | chr6.1:63651320-63651339 | MS.gene82103:intron | 35.0% | |
| TGACTAGAAATCTCCTTGAT+GGG | - | chr6.1:63651336-63651355 | None:intergenic | 35.0% | |
| TGAGTGCTTACCATTTGAAT+CGG | - | chr6.1:63649180-63649199 | None:intergenic | 35.0% | |
| TGTTTCAAAATCAAACCGGA+TGG | - | chr6.1:63653000-63653019 | None:intergenic | 35.0% | |
| TTCCAAGGAACCTTAAAACT+AGG | + | chr6.1:63649968-63649987 | MS.gene82103:intron | 35.0% | |
| TTCCAAGGAATGTTATTCCT+AGG | - | chr6.1:63649885-63649904 | None:intergenic | 35.0% | |
| TTCCTAGGAATAACATTCCT+TGG | + | chr6.1:63649880-63649899 | MS.gene82103:intron | 35.0% | |
| TTCTGCAGCAGTTACATTTA+TGG | + | chr6.1:63653827-63653846 | MS.gene82103:CDS | 35.0% | |
| TTGCAGGAACAAATATGCTT+GGG | - | chr6.1:63653113-63653132 | None:intergenic | 35.0% | |
| TTTAGAAAGGTTGTCTGCAA+GGG | + | chr6.1:63651795-63651814 | MS.gene82103:CDS | 35.0% | |
| TTTGCAGGAACAAATATGCT+TGG | - | chr6.1:63653114-63653133 | None:intergenic | 35.0% | |
| ! | AAACTTTTCTTTCCAACTGC+GGG | - | chr6.1:63652636-63652655 | None:intergenic | 35.0% |
| ! | ACTTTGTTAGGTGTTACAGA+CGG | - | chr6.1:63653063-63653082 | None:intergenic | 35.0% |
| ! | AGCACCAAATTTTCGATCAT+AGG | - | chr6.1:63650385-63650404 | None:intergenic | 35.0% |
| ! | ATCAAGGCATTAACATCCTT+AGG | - | chr6.1:63653267-63653286 | None:intergenic | 35.0% |
| ! | CAATTCTAGTTAACAGAGGA+TGG | + | chr6.1:63652606-63652625 | MS.gene82103:CDS | 35.0% |
| ! | CATAGACAGTATTTTCTGGA+AGG | - | chr6.1:63653197-63653216 | None:intergenic | 35.0% |
| ! | CCCCATCTTTTACAAAAACT+AGG | - | chr6.1:63653567-63653586 | None:intergenic | 35.0% |
| ! | GAATTGTTTGTATTTGGGAC+AGG | + | chr6.1:63653796-63653815 | MS.gene82103:intron | 35.0% |
| ! | GATTTTATTCCCATCTCCAT+GGG | + | chr6.1:63650014-63650033 | MS.gene82103:intron | 35.0% |
| ! | GGGAAAATTTTTCTATTCCC+AGG | + | chr6.1:63650061-63650080 | MS.gene82103:intron | 35.0% |
| ! | TAAGTAGACCATTCTAGAGA+AGG | - | chr6.1:63652079-63652098 | None:intergenic | 35.0% |
| ! | TAATGCCTTGATTCGAAGTT+CGG | + | chr6.1:63653275-63653294 | MS.gene82103:CDS | 35.0% |
| ! | TCTCCAATTCTAGTTAACAG+AGG | + | chr6.1:63652602-63652621 | MS.gene82103:CDS | 35.0% |
| ! | TGATTTTATTCCCATCTCCA+TGG | + | chr6.1:63650013-63650032 | MS.gene82103:intron | 35.0% |
| !! | CAAATTTGGTGCATTGTTAG+CGG | + | chr6.1:63650522-63650541 | MS.gene82103:intron | 35.0% |
| !! | CGCCTAGTTTTTGTAAAAGA+TGG | + | chr6.1:63653562-63653581 | MS.gene82103:intron | 35.0% |
| !! | TCAAGGAGATTTCTAGTCAT+AGG | + | chr6.1:63651337-63651356 | MS.gene82103:intron | 35.0% |
| !! | TCAGAAAGTTGGTATGTACA+AGG | - | chr6.1:63652228-63652247 | None:intergenic | 35.0% |
| !! | TGTATTGTTCTGTTTCTGGA+GGG | + | chr6.1:63653680-63653699 | MS.gene82103:intron | 35.0% |
| !! | TTGTATTGTTCTGTTTCTGG+AGG | + | chr6.1:63653679-63653698 | MS.gene82103:intron | 35.0% |
| !!! | TCACTTCCATGTTTTTGAGT+TGG | + | chr6.1:63652516-63652535 | MS.gene82103:intron | 35.0% |
| AAATGGTGGTTGTATCTACC+TGG | + | chr6.1:63649336-63649355 | MS.gene82103:CDS | 40.0% | |
| AACACCTAACAAAGTGGTTG+GGG | + | chr6.1:63653068-63653087 | MS.gene82103:CDS | 40.0% | |
| AAGTGAGGAGTTAGATTCTC+TGG | + | chr6.1:63651770-63651789 | MS.gene82103:CDS | 40.0% | |
| AGCATCCAATCAACTCACAT+CGG | - | chr6.1:63649587-63649606 | None:intergenic | 40.0% | |
| ATATTCGGCTACAGTAGAGA+AGG | - | chr6.1:63651121-63651140 | None:intergenic | 40.0% | |
| ATTCACATTCACTGCGATAG+TGG | + | chr6.1:63650822-63650841 | MS.gene82103:intron | 40.0% | |
| ATTGCAAATTGCGGCTAAAG+CGG | + | chr6.1:63650608-63650627 | MS.gene82103:intron | 40.0% | |
| CACGTTGTCAGAATGTATGA+GGG | + | chr6.1:63649829-63649848 | MS.gene82103:intron | 40.0% | |
| CACTTTAGTGTTGTAGCTAG+CGG | + | chr6.1:63650631-63650650 | MS.gene82103:intron | 40.0% | |
| CCGTTTCCTTGATATGTAGA+TGG | + | chr6.1:63651386-63651405 | MS.gene82103:intron | 40.0% | |
| CGATAATCAAAGAGTGAACG+TGG | + | chr6.1:63651505-63651524 | MS.gene82103:intron | 40.0% | |
| GAATAAAGTTCCCATGGAGA+TGG | - | chr6.1:63650027-63650046 | None:intergenic | 40.0% | |
| GAATCTAACTCCTCACTTGA+TGG | - | chr6.1:63651768-63651787 | None:intergenic | 40.0% | |
| GAGCTCAATTTAGCGCTTAT+TGG | + | chr6.1:63651457-63651476 | MS.gene82103:intron | 40.0% | |
| GATTGGATGCTCGTGTAAAA+AGG | + | chr6.1:63649596-63649615 | MS.gene82103:intron | 40.0% | |
| GCATTAACATCCTTAGGAAG+AGG | - | chr6.1:63653261-63653280 | None:intergenic | 40.0% | |
| GTAACACCTAACAAAGTGGT+TGG | + | chr6.1:63653066-63653085 | MS.gene82103:CDS | 40.0% | |
| GTCTGTAACACCTAACAAAG+TGG | + | chr6.1:63653062-63653081 | MS.gene82103:CDS | 40.0% | |
| TAATCCTTACCCTCTTCCTA+AGG | + | chr6.1:63653248-63653267 | MS.gene82103:CDS | 40.0% | |
| TATCCACTTAAATCATGCGG+AGG | + | chr6.1:63649517-63649536 | MS.gene82103:intron | 40.0% | |
| TCACGGATCACATGAAATAG+TGG | - | chr6.1:63650671-63650690 | None:intergenic | 40.0% | |
| TCACGTTGTCAGAATGTATG+AGG | + | chr6.1:63649828-63649847 | MS.gene82103:intron | 40.0% | |
| TCTACATATCAAGGAAACGG+AGG | - | chr6.1:63651386-63651405 | None:intergenic | 40.0% | |
| TCTTCTTCCTCCGATTCAAA+TGG | + | chr6.1:63649167-63649186 | MS.gene82103:CDS | 40.0% | |
| TGATCATGAACTGGCATAAG+AGG | - | chr6.1:63651909-63651928 | None:intergenic | 40.0% | |
| TGATGGGAATAAAGTTCCCA+TGG | - | chr6.1:63650033-63650052 | None:intergenic | 40.0% | |
| TTTGTTCCTGCAAATGATCC+CGG | + | chr6.1:63653120-63653139 | MS.gene82103:CDS | 40.0% | |
| ! | AACTTTTCTTTCCAACTGCG+GGG | - | chr6.1:63652635-63652654 | None:intergenic | 40.0% |
| ! | ACGCCTTCAATCTGAAGTAA+TGG | - | chr6.1:63653452-63653471 | None:intergenic | 40.0% |
| ! | AGTGGCAGTGTTTTCAATCA+CGG | - | chr6.1:63650688-63650707 | None:intergenic | 40.0% |
| ! | CTTTGTTAGGTGTTACAGAC+GGG | - | chr6.1:63653062-63653081 | None:intergenic | 40.0% |
| ! | GAGCAATTGCATTTGGTCTT+GGG | + | chr6.1:63649358-63649377 | MS.gene82103:CDS | 40.0% |
| ! | TACGTAGACCTTCTCTAGAA+TGG | + | chr6.1:63652068-63652087 | MS.gene82103:intron | 40.0% |
| ! | TCCCAGGAACATTTTATACC+CGG | + | chr6.1:63650077-63650096 | MS.gene82103:intron | 40.0% |
| !!! | TCCCTAGTTTTAAGGTTCCT+TGG | - | chr6.1:63649973-63649992 | None:intergenic | 40.0% |
| !!! | TGATGTGCTGTGCTATTTTG+CGG | + | chr6.1:63651057-63651076 | MS.gene82103:intron | 40.0% |
| AACCAAACTAGACAGCGAAC+CGG | + | chr6.1:63652856-63652875 | MS.gene82103:intron | 45.0% | |
| AAGCTGATGGAACCAAATCG+TGG | + | chr6.1:63652708-63652727 | MS.gene82103:CDS | 45.0% | |
| ACACCAACACATGTTGGACA+TGG | - | chr6.1:63653478-63653497 | None:intergenic | 45.0% | |
| ACATATCAAGGAAACGGAGG+AGG | - | chr6.1:63651383-63651402 | None:intergenic | 45.0% | |
| ACATCCTTAGGAAGAGGGTA+AGG | - | chr6.1:63653255-63653274 | None:intergenic | 45.0% | |
| ACTACCCCAACCACTTTGTT+AGG | - | chr6.1:63653075-63653094 | None:intergenic | 45.0% | |
| AGACCAAATGCAATTGCTCC+AGG | - | chr6.1:63649357-63649376 | None:intergenic | 45.0% | |
| ATAGAACCACTGAGAAGACC+CGG | - | chr6.1:63653142-63653161 | None:intergenic | 45.0% | |
| ATGTAGTTTAGGTGGTCCTG+AGG | - | chr6.1:63653306-63653325 | None:intergenic | 45.0% | |
| CAGTTCATGATCATCCTGAC+AGG | + | chr6.1:63651916-63651935 | MS.gene82103:CDS | 45.0% | |
| CATCACCGAACTTCGAATCA+AGG | - | chr6.1:63653283-63653302 | None:intergenic | 45.0% | |
| CATGCGGAGGTAGATATTTG+TGG | + | chr6.1:63649530-63649549 | MS.gene82103:intron | 45.0% | |
| CATTCTGACAACGTGAACCT+CGG | - | chr6.1:63649824-63649843 | None:intergenic | 45.0% | |
| CCAAAATCTCCACCACGATT+TGG | - | chr6.1:63652723-63652742 | None:intergenic | 45.0% | |
| CCATGACTCAAAGATATCGC+CGG | - | chr6.1:63652878-63652897 | None:intergenic | 45.0% | |
| CCCGGGTATAAAATGTTCCT+GGG | - | chr6.1:63650081-63650100 | None:intergenic | 45.0% | |
| CCTGAAATGCTTCTTGAACG+TGG | - | chr6.1:63651855-63651874 | None:intergenic | 45.0% | |
| CTACCTCCGCATGATTTAAG+TGG | - | chr6.1:63649523-63649542 | None:intergenic | 45.0% | |
| CTACCTGGAGCAATTGCATT+TGG | + | chr6.1:63649351-63649370 | MS.gene82103:CDS | 45.0% | |
| CTAGTCATAGGCTCATGTTG+TGG | + | chr6.1:63651349-63651368 | MS.gene82103:intron | 45.0% | |
| CTGCTTCAAACCACTGAACT+AGG | + | chr6.1:63652903-63652922 | MS.gene82103:intron | 45.0% | |
| CTGTCAGGATGATCATGAAC+TGG | - | chr6.1:63651918-63651937 | None:intergenic | 45.0% | |
| GGAAGAGGGTAAGGATTACT+TGG | - | chr6.1:63653246-63653265 | None:intergenic | 45.0% | |
| GGAGCAATTGCATTTGGTCT+TGG | + | chr6.1:63649357-63649376 | MS.gene82103:CDS | 45.0% | |
| GGCTAAGACAGAGTAACAAG+AGG | + | chr6.1:63653859-63653878 | MS.gene82103:CDS | 45.0% | |
| GGGGAAGAGAGATAGAAAGA+AGG | + | chr6.1:63650468-63650487 | MS.gene82103:intron | 45.0% | |
| GTGCTTACCATTTGAATCGG+AGG | - | chr6.1:63649177-63649196 | None:intergenic | 45.0% | |
| GTTCCATGTCCAACATGTGT+TGG | + | chr6.1:63653472-63653491 | MS.gene82103:intron | 45.0% | |
| GTTGTTCTGTGTTTGTGGTG+AGG | + | chr6.1:63650980-63650999 | MS.gene82103:intron | 45.0% | |
| TCCACTAGATCTGAATTGGC+TGG | - | chr6.1:63650874-63650893 | None:intergenic | 45.0% | |
| TCCAGCCAATTCAGATCTAG+TGG | + | chr6.1:63650870-63650889 | MS.gene82103:intron | 45.0% | |
| TCCCGGGTATAAAATGTTCC+TGG | - | chr6.1:63650082-63650101 | None:intergenic | 45.0% | |
| TCGACATGTCAGTTTCGTGT+TGG | - | chr6.1:63649718-63649737 | None:intergenic | 45.0% | |
| TGGTGCATATCCATCAAGTG+AGG | + | chr6.1:63651755-63651774 | MS.gene82103:CDS | 45.0% | |
| TGTCCAACACCAACACATGT+TGG | - | chr6.1:63653484-63653503 | None:intergenic | 45.0% | |
| TTACCAGTTGCTTGCTTTGC+AGG | + | chr6.1:63652491-63652510 | MS.gene82103:intron | 45.0% | |
| TTGACATTTGTCGGATACCG+AGG | + | chr6.1:63649804-63649823 | MS.gene82103:intron | 45.0% | |
| TTGGTTCCATCAGCTTGTGA+AGG | - | chr6.1:63652704-63652723 | None:intergenic | 45.0% | |
| TTGTTCCTGCAAATGATCCC+GGG | + | chr6.1:63653121-63653140 | MS.gene82103:CDS | 45.0% | |
| ! | CCCAGGAACATTTTATACCC+GGG | + | chr6.1:63650078-63650097 | MS.gene82103:intron | 45.0% |
| ! | TCGGAGGAAGAAGAAAGTGT+TGG | - | chr6.1:63649161-63649180 | None:intergenic | 45.0% |
| ! | TGTCCAACATGTGTTGGTGT+TGG | + | chr6.1:63653478-63653497 | MS.gene82103:intron | 45.0% |
| ! | TTGATTCTGAGAAAGGGGGA+AGG | + | chr6.1:63650204-63650223 | MS.gene82103:intron | 45.0% |
| !! | CCAAATCGTGGTGGAGATTT+TGG | + | chr6.1:63652720-63652739 | MS.gene82103:CDS | 45.0% |
| !! | CCACGTTCAAGAAGCATTTC+AGG | + | chr6.1:63651852-63651871 | MS.gene82103:CDS | 45.0% |
| !! | CGGAGGAAGAAGAAAGTGTT+GGG | - | chr6.1:63649160-63649179 | None:intergenic | 45.0% |
| !! | GGAAGAAGAAAGTGTTGGGT+CGG | - | chr6.1:63649156-63649175 | None:intergenic | 45.0% |
| !! | TGACACCGATGTGAGTTGAT+TGG | + | chr6.1:63649579-63649598 | MS.gene82103:intron | 45.0% |
| !! | TTGCATTTGGTCTTGGGAGT+TGG | + | chr6.1:63649364-63649383 | MS.gene82103:CDS | 45.0% |
| !! | AAATAAATAATAAACATATT+CGG | - | chr6.1:63651136-63651155 | None:intergenic | 5.0% |
| !!! | TTAGTTTTTTTTTTTTTTTT+TGG | + | chr6.1:63649760-63649779 | MS.gene82103:intron | 5.0% |
| AAACAAGAACGACCCGCATG+AGG | - | chr6.1:63649224-63649243 | None:intergenic | 50.0% | |
| AAAGTGGTTGGGGTAGTTCG+CGG | + | chr6.1:63653078-63653097 | MS.gene82103:CDS | 50.0% | |
| AAGCCTGCAAAGCAAGCAAC+TGG | - | chr6.1:63652497-63652516 | None:intergenic | 50.0% | |
| CCGGCGATATCTTTGAGTCA+TGG | + | chr6.1:63652875-63652894 | MS.gene82103:intron | 50.0% | |
| CGAAACTGACATGTCGACAC+CGG | + | chr6.1:63649721-63649740 | MS.gene82103:intron | 50.0% | |
| CTGATGGAACCAAATCGTGG+TGG | + | chr6.1:63652711-63652730 | MS.gene82103:CDS | 50.0% | |
| CTGCGGATCGGTTATTTGAG+CGG | - | chr6.1:63652946-63652965 | None:intergenic | 50.0% | |
| CTTCAGCTGGTTGAACCATC+CGG | + | chr6.1:63652982-63653001 | MS.gene82103:intron | 50.0% | |
| GCAGTTTCGTCCTAGTTCAG+TGG | - | chr6.1:63652916-63652935 | None:intergenic | 50.0% | |
| GTATGAACCAGCACTGTCTG+CGG | - | chr6.1:63652963-63652982 | None:intergenic | 50.0% | |
| TAGAACCACTGAGAAGACCC+GGG | - | chr6.1:63653141-63653160 | None:intergenic | 50.0% | |
| TCGAGGGAAGAGGTTGCAAA+TGG | + | chr6.1:63651716-63651735 | MS.gene82103:CDS | 50.0% | |
| TGTTGGGTCGGAATCAGAGA+CGG | - | chr6.1:63649144-63649163 | None:intergenic | 50.0% | |
| ! | TTTCTGGAAGGCCGCAAGAT+CGG | - | chr6.1:63653185-63653204 | None:intergenic | 50.0% |
| !! | GTGCTGGTTCATACTTCAGC+TGG | + | chr6.1:63652969-63652988 | MS.gene82103:intron | 50.0% |
| !! | TGTCAGCGTCGTGTTGGTTT+CGG | - | chr6.1:63650303-63650322 | None:intergenic | 50.0% |
| !! | TGTTGGAGTATCGAGGGAAG+AGG | + | chr6.1:63651706-63651725 | MS.gene82103:CDS | 50.0% |
| AACCAGCACTGTCTGCGGAT+CGG | - | chr6.1:63652958-63652977 | None:intergenic | 55.0% | |
| ACGGACAGTGGAGCTTATGC+CGG | - | chr6.1:63649102-63649121 | None:intergenic | 55.0% | |
| ATGATCCCGGGTCTTCTCAG+TGG | + | chr6.1:63653133-63653152 | MS.gene82103:CDS | 55.0% | |
| CCATCAGCTTGTGAAGGCGA+AGG | - | chr6.1:63652698-63652717 | None:intergenic | 55.0% | |
| CCTAGCATTGCCCGATCTTG+CGG | + | chr6.1:63653171-63653190 | MS.gene82103:CDS | 55.0% | |
| CCTTCGCCTTCACAAGCTGA+TGG | + | chr6.1:63652695-63652714 | MS.gene82103:CDS | 55.0% | |
| GAAGACCCGGGATCATTTGC+AGG | - | chr6.1:63653129-63653148 | None:intergenic | 55.0% | |
| GCTTGTGAAGGCGAAGGAAG+TGG | - | chr6.1:63652692-63652711 | None:intergenic | 55.0% | |
| ! | TAGGTGTTACAGACGGGACC+TGG | - | chr6.1:63653056-63653075 | None:intergenic | 55.0% |
| ! | TCGAAGTTCGGTGATGCCTC+AGG | + | chr6.1:63653287-63653306 | MS.gene82103:CDS | 55.0% |
| ! | TCGACTTGTCAGCGTCGTGT+TGG | - | chr6.1:63650309-63650328 | None:intergenic | 55.0% |
| ! | TTCTGGAAGGCCGCAAGATC+GGG | - | chr6.1:63653184-63653203 | None:intergenic | 55.0% |
| AACCGATCCGCAGACAGTGC+TGG | + | chr6.1:63652953-63652972 | MS.gene82103:intron | 60.0% | |
| AGTGGAGCTTATGCCGGTGC+GGG | - | chr6.1:63649096-63649115 | None:intergenic | 60.0% | |
| ATTCTGGCGGCGGAGTTGGA+TGG | - | chr6.1:63649047-63649066 | None:intergenic | 60.0% | |
| CAGCAGCGGAGCTGAATGGA+CGG | - | chr6.1:63649121-63649140 | None:intergenic | 60.0% | |
| CAGTGGAGCTTATGCCGGTG+CGG | - | chr6.1:63649097-63649116 | None:intergenic | 60.0% | |
| CCGCAAGATCGGGCAATGCT+AGG | - | chr6.1:63653174-63653193 | None:intergenic | 60.0% | |
| CGACGCTGACAAGTCGACAC+TGG | + | chr6.1:63650312-63650331 | MS.gene82103:intron | 60.0% | |
| GGAATCAGAGACGGCAGCAG+CGG | - | chr6.1:63649135-63649154 | None:intergenic | 60.0% | |
| GGAGCTGAATGGACGGACAG+TGG | - | chr6.1:63649114-63649133 | None:intergenic | 60.0% | |
| !! | CGCCGGTTCGCTGTCTAGTT+TGG | - | chr6.1:63652861-63652880 | None:intergenic | 60.0% |
| ACGGCAGCAGCGGAGCTGAA+TGG | - | chr6.1:63649125-63649144 | None:intergenic | 65.0% | |
| GAGCTCCGCGAGGATTCTGG+CGG | - | chr6.1:63649060-63649079 | None:intergenic | 65.0% | |
| GAGGATTCTGGCGGCGGAGT+TGG | - | chr6.1:63649051-63649070 | None:intergenic | 65.0% | |
| TGCCGGTGCGGGTGGAGATA+CGG | - | chr6.1:63649085-63649104 | None:intergenic | 65.0% | |
| ! | GAGGATGGGTTCCCCGCAGT+TGG | + | chr6.1:63652621-63652640 | MS.gene82103:CDS | 65.0% |
| AGATACGGCGGAGCTCCGCG+AGG | - | chr6.1:63649070-63649089 | None:intergenic | 70.0% | |
| CGCCGTATCTCCACCCGCAC+CGG | + | chr6.1:63649080-63649099 | MS.gene82103:CDS | 70.0% | |
| CGGTGCGGGTGGAGATACGG+CGG | - | chr6.1:63649082-63649101 | None:intergenic | 70.0% | |
| CTCCGCCGCCAGAATCCTCG+CGG | + | chr6.1:63649052-63649071 | MS.gene82103:CDS | 70.0% | |
| CTCCGCGAGGATTCTGGCGG+CGG | - | chr6.1:63649057-63649076 | None:intergenic | 70.0% | |
| CTGGCGGCGGAGTTGGATGG+TGG | - | chr6.1:63649044-63649063 | None:intergenic | 70.0% | |
| GCGGAGCTCCGCGAGGATTC+TGG | - | chr6.1:63649063-63649082 | None:intergenic | 70.0% | |
| GGAGCTTATGCCGGTGCGGG+TGG | - | chr6.1:63649093-63649112 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 63649038 | 63653887 | 63649038 | ID=MS.gene82103 |
| chr6.1 | mRNA | 63649038 | 63653887 | 63649038 | ID=MS.gene82103.t1;Parent=MS.gene82103 |
| chr6.1 | exon | 63649038 | 63649188 | 63649038 | ID=MS.gene82103.t1.exon1;Parent=MS.gene82103.t1 |
| chr6.1 | CDS | 63649038 | 63649188 | 63649038 | ID=cds.MS.gene82103.t1;Parent=MS.gene82103.t1 |
| chr6.1 | exon | 63649325 | 63649410 | 63649325 | ID=MS.gene82103.t1.exon2;Parent=MS.gene82103.t1 |
| chr6.1 | CDS | 63649325 | 63649410 | 63649325 | ID=cds.MS.gene82103.t1;Parent=MS.gene82103.t1 |
| chr6.1 | exon | 63651699 | 63651937 | 63651699 | ID=MS.gene82103.t1.exon3;Parent=MS.gene82103.t1 |
| chr6.1 | CDS | 63651699 | 63651937 | 63651699 | ID=cds.MS.gene82103.t1;Parent=MS.gene82103.t1 |
| chr6.1 | exon | 63652595 | 63652766 | 63652595 | ID=MS.gene82103.t1.exon4;Parent=MS.gene82103.t1 |
| chr6.1 | CDS | 63652595 | 63652766 | 63652595 | ID=cds.MS.gene82103.t1;Parent=MS.gene82103.t1 |
| chr6.1 | exon | 63653051 | 63653334 | 63653051 | ID=MS.gene82103.t1.exon5;Parent=MS.gene82103.t1 |
| chr6.1 | CDS | 63653051 | 63653334 | 63653051 | ID=cds.MS.gene82103.t1;Parent=MS.gene82103.t1 |
| chr6.1 | exon | 63653818 | 63653887 | 63653818 | ID=MS.gene82103.t1.exon6;Parent=MS.gene82103.t1 |
| chr6.1 | CDS | 63653818 | 63653887 | 63653818 | ID=cds.MS.gene82103.t1;Parent=MS.gene82103.t1 |
| Gene Sequence |
| Protein sequence |
