Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82394.t1 | XP_003607817.1 | 99.6 | 269 | 1 | 0 | 25 | 293 | 25 | 293 | 2.40E-147 | 531.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82394.t1 | Q9SKZ1 | 84.0 | 269 | 43 | 0 | 25 | 293 | 28 | 296 | 1.2e-126 | 454.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82394.t1 | G7JHJ7 | 99.6 | 269 | 1 | 0 | 25 | 293 | 25 | 293 | 1.7e-147 | 531.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049887 | MS.gene82394 | 0.806274 | 8.91E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene82394 | 0.827794 | 1.28E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene82394 | 0.846278 | 2.40E-59 | -1.69E-46 |
| MS.gene054584 | MS.gene82394 | 0.818075 | 2.37E-52 | -1.69E-46 |
| MS.gene055890 | MS.gene82394 | 0.819931 | 8.96E-53 | -1.69E-46 |
| MS.gene055891 | MS.gene82394 | 0.850084 | 2.13E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82394.t1 | MTR_4g083230 | 99.317 | 293 | 2 | 0 | 1 | 293 | 1 | 293 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82394.t1 | AT2G32080 | 84.444 | 270 | 41 | 1 | 24 | 293 | 27 | 295 | 2.22e-167 | 466 |
| MS.gene82394.t1 | AT2G32080 | 83.704 | 270 | 44 | 0 | 24 | 293 | 27 | 296 | 2.01e-166 | 463 |
Find 88 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCCAGCTCAGGATGAAAT+TGG | 0.220182 | 4.2:+26233396 | MS.gene82394:CDS |
| TTCCTTTCTCCGGCATTTCC+TGG | 0.262031 | 4.2:+26230114 | MS.gene82394:CDS |
| GTTATTTCATTGCAGGTTGC+AGG | 0.287453 | 4.2:+26233598 | MS.gene82394:intron |
| GTTGGTGCTGGCTTCATATC+TGG | 0.289736 | 4.2:+26233318 | MS.gene82394:CDS |
| CCTCAGATATTCTTAGAAAA+TGG | 0.311616 | 4.2:-26233494 | None:intergenic |
| TAGAAGAGGCCGTTTCTTAA+AGG | 0.313607 | 4.2:+26230466 | MS.gene82394:CDS |
| TTGATCTTGGGAACAACAAT+AGG | 0.316191 | 4.2:+26233469 | MS.gene82394:CDS |
| GCGTAGATGGAGGGAAGCTC+CGG | 0.341711 | 4.2:+26229906 | None:intergenic |
| ATGAAGGGTGGGCAGCATTC+AGG | 0.344998 | 4.2:+26233087 | MS.gene82394:CDS |
| GGTGGTGGCGGCGGCGGCGG+TGG | 0.354507 | 4.2:+26229930 | MS.gene82394:CDS |
| TCAATCATTCTTCCATTGTC+GGG | 0.356300 | 4.2:+26233634 | MS.gene82394:CDS |
| GCCGCCGCCGCCACCACCCC+CGG | 0.359257 | 4.2:-26229925 | None:intergenic |
| TTGTTCCTGCAGGAAGTTCC+AGG | 0.375829 | 4.2:+26233063 | MS.gene82394:CDS |
| CTCAATCATTCTTCCATTGT+CGG | 0.380080 | 4.2:+26233633 | MS.gene82394:CDS |
| TGATCTTGGGAACAACAATA+GGG | 0.389790 | 4.2:+26233470 | MS.gene82394:CDS |
| GGTAGTAGCGGTGGTGGAGG+TGG | 0.398826 | 4.2:+26229951 | MS.gene82394:CDS |
| AGTAGCGGTGGTGGAGGTGG+AGG | 0.402015 | 4.2:+26229954 | MS.gene82394:CDS |
| GGCAGCATTCAGGAACATTC+TGG | 0.414246 | 4.2:+26233097 | MS.gene82394:CDS |
| ACCATCATCGTTCCTTTCTC+CGG | 0.417144 | 4.2:+26230104 | MS.gene82394:CDS |
| AAGCAGTTTCATGAGATTGT+TGG | 0.420908 | 4.2:+26233661 | MS.gene82394:CDS |
| CATACCCTCAATTCGGTCCT+TGG | 0.435320 | 4.2:-26233701 | None:intergenic |
| GTCGGTTGATTTGCCAGCTC+AGG | 0.437800 | 4.2:+26233386 | MS.gene82394:CDS |
| CGTAGATGGAGGGAAGCTCC+GGG | 0.443509 | 4.2:+26229907 | None:intergenic |
| TGCTGCCCACCCTTCATCCC+TGG | 0.445063 | 4.2:-26233081 | None:intergenic |
| ATGAAACCTGATTCGGAAGA+AGG | 0.447366 | 4.2:-26233148 | None:intergenic |
| TCAGGATGAAATTGGGAACT+TGG | 0.448346 | 4.2:+26233404 | MS.gene82394:CDS |
| CTTTCAGATGATGTTGGTGC+TGG | 0.450565 | 4.2:+26233306 | MS.gene82394:CDS |
| AATTTAGCATTCATCTTTGA+GGG | 0.451848 | 4.2:-26233753 | None:intergenic |
| AGCGGTGGTGGAGGTGGAGG+TGG | 0.451963 | 4.2:+26229957 | MS.gene82394:CDS |
| TTGATCAGCTCTGATCACTT+TGG | 0.454267 | 4.2:-26233433 | None:intergenic |
| TGAGATTGTTGGTCACTTTG+TGG | 0.454440 | 4.2:+26233672 | MS.gene82394:CDS |
| CAATTTAGCATTCATCTTTG+AGG | 0.455509 | 4.2:-26233754 | None:intergenic |
| TGCCAGCTCAGGATGAAATT+GGG | 0.464017 | 4.2:+26233397 | MS.gene82394:CDS |
| CAAAAGAATGAAACCTGATT+CGG | 0.468159 | 4.2:-26233155 | None:intergenic |
| ATCAAGAAACCAGGAAATGC+CGG | 0.469535 | 4.2:-26230123 | None:intergenic |
| GCAGGAAGTTCCAGGGATGA+AGG | 0.480780 | 4.2:+26233071 | MS.gene82394:CDS |
| AACCAGGAAATGCCGGAGAA+AGG | 0.481593 | 4.2:-26230116 | None:intergenic |
| TAGATGGAGGGAAGCTCCGG+GGG | 0.484528 | 4.2:+26229909 | None:intergenic |
| CAGGATGAAATTGGGAACTT+GGG | 0.489960 | 4.2:+26233405 | MS.gene82394:CDS |
| TGTCTGAAGCTTCTGTCAGC+AGG | 0.503389 | 4.2:+26233024 | MS.gene82394:CDS |
| GGCGGTGGTAGTAGCGGTGG+TGG | 0.504090 | 4.2:+26229945 | MS.gene82394:CDS |
| GGTGGTAGTAGCGGTGGTGG+AGG | 0.515981 | 4.2:+26229948 | MS.gene82394:CDS |
| CGACTACTTTCAGATGATGT+TGG | 0.519100 | 4.2:+26233300 | MS.gene82394:CDS |
| CAATTATTATGTTAATTCTG+AGG | 0.522336 | 4.2:+26230151 | MS.gene82394:CDS |
| CAACTGACATACCCTCAATT+CGG | 0.522913 | 4.2:-26233708 | None:intergenic |
| AGGTGGAGGTGGTGCTGACG+TGG | 0.524355 | 4.2:+26229968 | MS.gene82394:CDS |
| TTCCCAATTTCATCCTGAGC+TGG | 0.526038 | 4.2:-26233399 | None:intergenic |
| TGGATATTGGCGTAGATGGA+GGG | 0.535298 | 4.2:+26229897 | None:intergenic |
| AAGTAAGTACCTTTAAGAAA+CGG | 0.537669 | 4.2:-26230475 | None:intergenic |
| AATCACCAAGGACCGAATTG+AGG | 0.544438 | 4.2:+26233696 | MS.gene82394:CDS |
| AGCACTATAATTGTTCCTGC+AGG | 0.545453 | 4.2:+26233053 | MS.gene82394:CDS |
| ACAGCAAAATTCTGAATCCT+CGG | 0.546233 | 4.2:+26233275 | MS.gene82394:intron |
| ATCACCAAGGACCGAATTGA+GGG | 0.546646 | 4.2:+26233697 | MS.gene82394:CDS |
| CTTCTGAATTGAATGTGGAC+AGG | 0.549374 | 4.2:+26233364 | MS.gene82394:CDS |
| TCATCCCTGGAACTTCCTGC+AGG | 0.551352 | 4.2:-26233068 | None:intergenic |
| GGCGGCGGCGGTGGTAGTAG+CGG | 0.558217 | 4.2:+26229939 | MS.gene82394:CDS |
| AAGTTCCAGGGATGAAGGGT+GGG | 0.558834 | 4.2:+26233076 | MS.gene82394:CDS |
| CGACAATGGAAGAATGATTG+AGG | 0.563454 | 4.2:-26233632 | None:intergenic |
| CACATTCAATTCAGAAGAGG+TGG | 0.568175 | 4.2:-26233358 | None:intergenic |
| TCTTTGTAAGACGTTACAAG+TGG | 0.569662 | 4.2:+26229995 | MS.gene82394:CDS |
| CAATCATTCTTCCATTGTCG+GGG | 0.572962 | 4.2:+26233635 | MS.gene82394:CDS |
| TTCAATTCAGAAGAGGTGGC+AGG | 0.574176 | 4.2:-26233354 | None:intergenic |
| CAGGAAGTTCCAGGGATGAA+GGG | 0.577060 | 4.2:+26233072 | MS.gene82394:CDS |
| GAAGTTCCAGGGATGAAGGG+TGG | 0.581907 | 4.2:+26233075 | MS.gene82394:CDS |
| GACATTGGAGAGAATAGAAG+AGG | 0.584768 | 4.2:+26230452 | MS.gene82394:CDS |
| CAGGAACAATTATAGTGCTA+CGG | 0.587717 | 4.2:-26233049 | None:intergenic |
| GCCGGAGAAAGGAACGATGA+TGG | 0.588635 | 4.2:-26230105 | None:intergenic |
| TGTTCCTGCAGGAAGTTCCA+GGG | 0.590512 | 4.2:+26233064 | MS.gene82394:CDS |
| TTTAGCATTCATCTTTGAGG+GGG | 0.591689 | 4.2:-26233751 | None:intergenic |
| AACTGCTTGAGCCCCGACAA+TGG | 0.592807 | 4.2:-26233646 | None:intergenic |
| AGGATGAAATTGGGAACTTG+GGG | 0.593840 | 4.2:+26233406 | MS.gene82394:CDS |
| GGAATTGCAGCTTGATACCA+AGG | 0.607576 | 4.2:+26230193 | MS.gene82394:CDS |
| GTAGATGGAGGGAAGCTCCG+GGG | 0.608536 | 4.2:+26229908 | None:intergenic |
| GGCGGCGGTGGTAGTAGCGG+TGG | 0.617903 | 4.2:+26229942 | MS.gene82394:CDS |
| GGATGAAATTGGGAACTTGG+GGG | 0.621343 | 4.2:+26233407 | MS.gene82394:CDS |
| CACCTCTTCTGAATTGAATG+TGG | 0.629994 | 4.2:+26233359 | MS.gene82394:CDS |
| GTCCACATTCAATTCAGAAG+AGG | 0.634204 | 4.2:-26233361 | None:intergenic |
| ATTTAGCATTCATCTTTGAG+GGG | 0.653146 | 4.2:-26233752 | None:intergenic |
| GATGGTAGACCTAGTAGCAG+AGG | 0.654078 | 4.2:-26230087 | None:intergenic |
| TGAATTGAATGTGGACAGGT+CGG | 0.657373 | 4.2:+26233368 | MS.gene82394:CDS |
| GATCTTGGGAACAACAATAG+GGG | 0.659904 | 4.2:+26233471 | MS.gene82394:CDS |
| ATTGAAGAGATCAAGAAACC+AGG | 0.668036 | 4.2:-26230132 | None:intergenic |
| ATCTGAAAGTAGTCGCTCCG+AGG | 0.679752 | 4.2:-26233292 | None:intergenic |
| TCACTTTGTGGAAATCACCA+AGG | 0.693256 | 4.2:+26233684 | MS.gene82394:CDS |
| CGGAAGAAGGAAAAGCCTCG+AGG | 0.708267 | 4.2:-26233135 | None:intergenic |
| ATCTTAAGGTAACGACCACG+AGG | 0.728305 | 4.2:-26230053 | None:intergenic |
| CAGAGATTAATGAAGCCTCG+AGG | 0.735251 | 4.2:+26233120 | MS.gene82394:CDS |
| GATCTGAAAGAGAATCCTCG+TGG | 0.761890 | 4.2:+26230038 | MS.gene82394:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATAAAAAATCC+AGG | - | chr4.2:26231395-26231414 | None:intergenic | 10.0% |
| !! | ATAAAAATTACTATTTCAAA+CGG | + | chr4.2:26231872-26231891 | MS.gene82394:intron | 10.0% |
| !!! | AATTTTTATGTTATGTTTTT+TGG | - | chr4.2:26231861-26231880 | None:intergenic | 10.0% |
| !!! | ATTTTTATGTTATGTTTTTT+GGG | - | chr4.2:26231860-26231879 | None:intergenic | 10.0% |
| !! | AATTCCTTAATATTCTATAT+AGG | + | chr4.2:26232189-26232208 | MS.gene82394:intron | 15.0% |
| !! | TAATTACATAAGTATTTCAA+GGG | + | chr4.2:26232528-26232547 | MS.gene82394:intron | 15.0% |
| !! | TTAATTACATAAGTATTTCA+AGG | + | chr4.2:26232527-26232546 | MS.gene82394:intron | 15.0% |
| !!! | AGTAAAAAAAATGCTATTTT+TGG | + | chr4.2:26231995-26232014 | MS.gene82394:intron | 15.0% |
| !!! | TAATTATTGTTTTATGTTTC+AGG | + | chr4.2:26230418-26230437 | MS.gene82394:intron | 15.0% |
| !! | CAATTATTATGTTAATTCTG+AGG | + | chr4.2:26230151-26230170 | MS.gene82394:CDS | 20.0% |
| !! | GTTAAAAATATTCTTCATTG+CGG | - | chr4.2:26230722-26230741 | None:intergenic | 20.0% |
| !! | TTAATTTCTCATCATAAACA+GGG | - | chr4.2:26231049-26231068 | None:intergenic | 20.0% |
| !!! | AAAAGATTTTTCTTTGATCT+TGG | + | chr4.2:26233456-26233475 | MS.gene82394:CDS | 20.0% |
| !!! | AAAGATTTTTCTTTGATCTT+GGG | + | chr4.2:26233457-26233476 | MS.gene82394:CDS | 20.0% |
| !!! | AAGATAACAACTTTTTATGA+GGG | - | chr4.2:26232877-26232896 | None:intergenic | 20.0% |
| !!! | AATTAGTTTAAGTGTATGTT+TGG | - | chr4.2:26230362-26230381 | None:intergenic | 20.0% |
| !!! | AATTTTTGTTATTTCATTGC+AGG | + | chr4.2:26233591-26233610 | MS.gene82394:intron | 20.0% |
| !!! | AGTATTTCAAGTGTAATTAT+AGG | + | chr4.2:26232672-26232691 | MS.gene82394:intron | 20.0% |
| !!! | ATTAAAACAATTTAGGTTCA+AGG | - | chr4.2:26232835-26232854 | None:intergenic | 20.0% |
| !!! | ATTTTACGTATAATTGGTAA+GGG | - | chr4.2:26232798-26232817 | None:intergenic | 20.0% |
| !!! | ATTTTACGTTGAGTATTTTA+GGG | + | chr4.2:26231480-26231499 | MS.gene82394:intron | 20.0% |
| !!! | CATTTTGTATTAGAAGTTTA+GGG | + | chr4.2:26231628-26231647 | MS.gene82394:intron | 20.0% |
| !!! | TAGGATTTTAGGATTAAAAT+CGG | - | chr4.2:26232326-26232345 | None:intergenic | 20.0% |
| !!! | TATTTTACGTTGAGTATTTT+AGG | + | chr4.2:26231479-26231498 | MS.gene82394:intron | 20.0% |
| !!! | TCATTTTGTATTAGAAGTTT+AGG | + | chr4.2:26231627-26231646 | MS.gene82394:intron | 20.0% |
| !!! | TTTAATTTCTCATCATAAAC+AGG | - | chr4.2:26231050-26231069 | None:intergenic | 20.0% |
| !!! | TTTTAAACAGAGAAAATAGA+AGG | - | chr4.2:26231459-26231478 | None:intergenic | 20.0% |
| ! | AAGAATAATCACAAAATCCT+AGG | - | chr4.2:26232345-26232364 | None:intergenic | 25.0% |
| ! | AAGGAAATTGAGTTATTATG+CGG | + | chr4.2:26230671-26230690 | MS.gene82394:intron | 25.0% |
| ! | ACAAACTGTAACAAAACAAA+GGG | + | chr4.2:26231935-26231954 | MS.gene82394:intron | 25.0% |
| ! | ACACATCAAAAAAGATAACT+TGG | - | chr4.2:26233225-26233244 | None:intergenic | 25.0% |
| ! | AGAATCGTTAAATTAATCGT+AGG | - | chr4.2:26232762-26232781 | None:intergenic | 25.0% |
| ! | ATTATGTACTGTGCAATAAA+GGG | - | chr4.2:26231429-26231448 | None:intergenic | 25.0% |
| ! | ATTGCACAGTACATAATATA+TGG | + | chr4.2:26231432-26231451 | MS.gene82394:intron | 25.0% |
| ! | ATTTGGGAATTTCTATCTAA+TGG | + | chr4.2:26232931-26232950 | MS.gene82394:intron | 25.0% |
| ! | CTTACGTATTATGTGTATTT+GGG | + | chr4.2:26232915-26232934 | MS.gene82394:intron | 25.0% |
| ! | GAACATAAGAACAATAAAAC+CGG | + | chr4.2:26232120-26232139 | MS.gene82394:intron | 25.0% |
| ! | GAAGGACAATAAAAACATAA+TGG | - | chr4.2:26233527-26233546 | None:intergenic | 25.0% |
| ! | GACACCTATATAGAATATTA+AGG | - | chr4.2:26232196-26232215 | None:intergenic | 25.0% |
| ! | TAATCAATTGTGTAGGTAAT+AGG | - | chr4.2:26231265-26231284 | None:intergenic | 25.0% |
| ! | TAATTTCTCATCATAAACAG+GGG | - | chr4.2:26231048-26231067 | None:intergenic | 25.0% |
| ! | TACAACAAAATAAAGGAAGA+AGG | - | chr4.2:26233545-26233564 | None:intergenic | 25.0% |
| ! | TACATGCATATAAAATAGCA+TGG | - | chr4.2:26232713-26232732 | None:intergenic | 25.0% |
| ! | TAGCCTCATTAAAACAATTT+AGG | - | chr4.2:26232842-26232861 | None:intergenic | 25.0% |
| ! | TATTATGTACTGTGCAATAA+AGG | - | chr4.2:26231430-26231449 | None:intergenic | 25.0% |
| ! | TGAAGATTAATCAATTGTGT+AGG | - | chr4.2:26231272-26231291 | None:intergenic | 25.0% |
| ! | TGGAATTTCTGATTTATCTT+AGG | + | chr4.2:26231097-26231116 | MS.gene82394:intron | 25.0% |
| !! | AAAGATAACTTGGAAAGTTT+TGG | - | chr4.2:26233215-26233234 | None:intergenic | 25.0% |
| !! | AAGTAAGTACCTTTAAGAAA+CGG | - | chr4.2:26230478-26230497 | None:intergenic | 25.0% |
| !! | ATCAGGATTTTACGTATAAT+TGG | - | chr4.2:26232804-26232823 | None:intergenic | 25.0% |
| !! | CAAGATAACAACTTTTTATG+AGG | - | chr4.2:26232878-26232897 | None:intergenic | 25.0% |
| !! | CGAGAAATGGAAATTTTATT+TGG | + | chr4.2:26230775-26230794 | MS.gene82394:intron | 25.0% |
| !! | CTTTTATGTTTCAACTTTCA+AGG | + | chr4.2:26232031-26232050 | MS.gene82394:intron | 25.0% |
| !! | GATTTTACGTATAATTGGTA+AGG | - | chr4.2:26232799-26232818 | None:intergenic | 25.0% |
| !! | GTATCAACTGATTCTATTTA+TGG | + | chr4.2:26230536-26230555 | MS.gene82394:intron | 25.0% |
| !! | TTTTACGTATAATTGGTAAG+GGG | - | chr4.2:26232797-26232816 | None:intergenic | 25.0% |
| !!! | AAAATGCTATTTTTGGAGAA+TGG | + | chr4.2:26232002-26232021 | MS.gene82394:intron | 25.0% |
| !!! | AATTTTTGGAAAATCACTGT+GGG | + | chr4.2:26230299-26230318 | MS.gene82394:intron | 25.0% |
| !!! | AGGATTTTAGGATTAAAATC+GGG | - | chr4.2:26232325-26232344 | None:intergenic | 25.0% |
| !!! | AGGTTTTTTCAGAAATCTTA+AGG | - | chr4.2:26230070-26230089 | None:intergenic | 25.0% |
| !!! | ATTTTAAGACATGCACAAAT+GGG | + | chr4.2:26231912-26231931 | MS.gene82394:intron | 25.0% |
| !!! | CCTTTATTTTGTTGTAGTTT+GGG | + | chr4.2:26233549-26233568 | MS.gene82394:intron | 25.0% |
| !!! | GAACCTAAATTGTTTTAATG+AGG | + | chr4.2:26232836-26232855 | MS.gene82394:intron | 25.0% |
| !!! | GATTTTAATCCTAAAATCCT+AGG | + | chr4.2:26232325-26232344 | MS.gene82394:intron | 25.0% |
| !!! | TAATTTTTGGAAAATCACTG+TGG | + | chr4.2:26230298-26230317 | MS.gene82394:intron | 25.0% |
| !!! | TCCTTTATTTTGTTGTAGTT+TGG | + | chr4.2:26233548-26233567 | MS.gene82394:intron | 25.0% |
| !!! | TTTGATGATGATATGCTTAA+AGG | + | chr4.2:26231152-26231171 | MS.gene82394:intron | 25.0% |
| !!! | TTTTACGTTGAGTATTTTAG+GGG | + | chr4.2:26231481-26231500 | MS.gene82394:intron | 25.0% |
| AAGAGAAATTAAGTGGGAAA+CGG | - | chr4.2:26231355-26231374 | None:intergenic | 30.0% | |
| ACATAATACGTAAGCCTAAA+AGG | - | chr4.2:26232909-26232928 | None:intergenic | 30.0% | |
| AGAATCATTTCACAGAAAAG+TGG | - | chr4.2:26232424-26232443 | None:intergenic | 30.0% | |
| AGGAAATTGAGTTATTATGC+GGG | + | chr4.2:26230672-26230691 | MS.gene82394:intron | 30.0% | |
| AGTCAGAAGAGAAATTAAGT+GGG | - | chr4.2:26231361-26231380 | None:intergenic | 30.0% | |
| ATAAATCAGAAATTCCACCA+CGG | - | chr4.2:26231094-26231113 | None:intergenic | 30.0% | |
| ATATTCTTCATTGCGGTAAA+AGG | - | chr4.2:26230715-26230734 | None:intergenic | 30.0% | |
| ATCTTACTACTGTAAGATCT+AGG | + | chr4.2:26230857-26230876 | MS.gene82394:intron | 30.0% | |
| ATTTAGTGTATACTCGTACT+TGG | - | chr4.2:26232375-26232394 | None:intergenic | 30.0% | |
| CAAAAGAATGAAACCTGATT+CGG | - | chr4.2:26233158-26233177 | None:intergenic | 30.0% | |
| CAAACAAACAAGTTGTGAAA+TGG | - | chr4.2:26230755-26230774 | None:intergenic | 30.0% | |
| CAAACTGTAACAAAACAAAG+GGG | + | chr4.2:26231936-26231955 | MS.gene82394:intron | 30.0% | |
| CAATGAAATTCAAAGCAACT+AGG | + | chr4.2:26230583-26230602 | MS.gene82394:intron | 30.0% | |
| CCCAAACTACAACAAAATAA+AGG | - | chr4.2:26233552-26233571 | None:intergenic | 30.0% | |
| CCTCAGATATTCTTAGAAAA+TGG | - | chr4.2:26233497-26233516 | None:intergenic | 30.0% | |
| CTAGTAATCATGTGAGAAAA+AGG | - | chr4.2:26230394-26230413 | None:intergenic | 30.0% | |
| GACAAACTGTAACAAAACAA+AGG | + | chr4.2:26231934-26231953 | MS.gene82394:intron | 30.0% | |
| GCTTACGTATTATGTGTATT+TGG | + | chr4.2:26232914-26232933 | MS.gene82394:intron | 30.0% | |
| GTATACACTAAATCCCAATT+TGG | + | chr4.2:26232382-26232401 | MS.gene82394:intron | 30.0% | |
| GTGAAATGATTCTACGATTA+TGG | + | chr4.2:26232431-26232450 | MS.gene82394:intron | 30.0% | |
| GTGTGATTTATACATGTTGA+AGG | - | chr4.2:26231224-26231243 | None:intergenic | 30.0% | |
| GTTTCCAATTAACCTAAACA+TGG | + | chr4.2:26232289-26232308 | MS.gene82394:intron | 30.0% | |
| TAATCATGTGAGAAAAAGGA+GGG | - | chr4.2:26230390-26230409 | None:intergenic | 30.0% | |
| TACTCATAATTCACTTCACT+TGG | + | chr4.2:26230216-26230235 | MS.gene82394:intron | 30.0% | |
| TAGGTATGACATTAGTATTG+TGG | - | chr4.2:26231246-26231265 | None:intergenic | 30.0% | |
| TCAAACGGTAACAAAACAAA+GGG | + | chr4.2:26231887-26231906 | MS.gene82394:intron | 30.0% | |
| TCAATTTCCTTATACCTCAT+GGG | - | chr4.2:26230662-26230681 | None:intergenic | 30.0% | |
| TCTAATACAAAATGATCACC+TGG | - | chr4.2:26231622-26231641 | None:intergenic | 30.0% | |
| TCTGGCAACATGAATATAAA+AGG | - | chr4.2:26231521-26231540 | None:intergenic | 30.0% | |
| TTAATTGGAAACACCAATAC+CGG | - | chr4.2:26232281-26232300 | None:intergenic | 30.0% | |
| TTATGTACTGTGCAATAAAG+GGG | - | chr4.2:26231428-26231447 | None:intergenic | 30.0% | |
| TTCAAACGGTAACAAAACAA+AGG | + | chr4.2:26231886-26231905 | MS.gene82394:intron | 30.0% | |
| TTCTAATTTCACATCATTCC+TGG | + | chr4.2:26230882-26230901 | MS.gene82394:intron | 30.0% | |
| TTTACGTATAATTGGTAAGG+GGG | - | chr4.2:26232796-26232815 | None:intergenic | 30.0% | |
| ! | ACTACCATGTTTAGGTTAAT+TGG | - | chr4.2:26232296-26232315 | None:intergenic | 30.0% |
| ! | AGAAGCTAGAGTGTAATTTT+TGG | + | chr4.2:26230285-26230304 | MS.gene82394:intron | 30.0% |
| ! | AGGGAAAACTCTTCTATTTT+TGG | + | chr4.2:26231702-26231721 | MS.gene82394:intron | 30.0% |
| ! | ATAACAACTTTTTATGAGGG+AGG | - | chr4.2:26232874-26232893 | None:intergenic | 30.0% |
| ! | GCTTGATTTTGTTCAATTCT+AGG | - | chr4.2:26231752-26231771 | None:intergenic | 30.0% |
| ! | GTGTTTGAGTAGACTTATTT+TGG | + | chr4.2:26230945-26230964 | MS.gene82394:intron | 30.0% |
| ! | TAACAACTTTTTATGAGGGA+GGG | - | chr4.2:26232873-26232892 | None:intergenic | 30.0% |
| ! | TCACAAAATCCTAGGATTTT+AGG | - | chr4.2:26232337-26232356 | None:intergenic | 30.0% |
| ! | TCTGCATTTGAATTTTGTGA+CGG | + | chr4.2:26232214-26232233 | MS.gene82394:intron | 30.0% |
| !! | CCATTTTCTAAGAATATCTG+AGG | + | chr4.2:26233494-26233513 | MS.gene82394:CDS | 30.0% |
| !!! | ATCTTGTTTTGCATCCTTTT+AGG | + | chr4.2:26232892-26232911 | MS.gene82394:intron | 30.0% |
| !!! | CATTTTAAGACATGCACAAA+TGG | + | chr4.2:26231911-26231930 | MS.gene82394:intron | 30.0% |
| !!! | CTCTACTTTTTTTTTTGCGA+AGG | + | chr4.2:26233001-26233020 | MS.gene82394:intron | 30.0% |
| AAAAAATCCAGGCTCTATCT+AGG | - | chr4.2:26231384-26231403 | None:intergenic | 35.0% | |
| AAAACGTTTGCAATCAACTC+CGG | + | chr4.2:26232259-26232278 | MS.gene82394:intron | 35.0% | |
| AAGCAGTTTCATGAGATTGT+TGG | + | chr4.2:26233661-26233680 | MS.gene82394:CDS | 35.0% | |
| AATCATGTGAGAAAAAGGAG+GGG | - | chr4.2:26230389-26230408 | None:intergenic | 35.0% | |
| ACAGCAAAATTCTGAATCCT+CGG | + | chr4.2:26233275-26233294 | MS.gene82394:intron | 35.0% | |
| ACTTGTTTGTTTGCGAGAAA+TGG | + | chr4.2:26230762-26230781 | MS.gene82394:intron | 35.0% | |
| AGAGAAATTAAGTGGGAAAC+GGG | - | chr4.2:26231354-26231373 | None:intergenic | 35.0% | |
| ATACAGGATTCCACCAAATT+GGG | - | chr4.2:26232398-26232417 | None:intergenic | 35.0% | |
| ATCGGATAGGAACAATAATC+TGG | - | chr4.2:26231539-26231558 | None:intergenic | 35.0% | |
| ATTGAAGAGATCAAGAAACC+AGG | - | chr4.2:26230135-26230154 | None:intergenic | 35.0% | |
| ATTGTGATTATGGCATACTC+AGG | + | chr4.2:26230330-26230349 | MS.gene82394:intron | 35.0% | |
| CAGGAACAATTATAGTGCTA+CGG | - | chr4.2:26233052-26233071 | None:intergenic | 35.0% | |
| CATGCAAAAACAACAGAAAG+CGG | - | chr4.2:26231670-26231689 | None:intergenic | 35.0% | |
| CTCAATCATTCTTCCATTGT+CGG | + | chr4.2:26233633-26233652 | MS.gene82394:CDS | 35.0% | |
| CTCAATTTCCTTATACCTCA+TGG | - | chr4.2:26230663-26230682 | None:intergenic | 35.0% | |
| GAAGTGAATTATGAGTACCT+TGG | - | chr4.2:26230213-26230232 | None:intergenic | 35.0% | |
| GAGTCAGAAGAGAAATTAAG+TGG | - | chr4.2:26231362-26231381 | None:intergenic | 35.0% | |
| GCGAAGTTGTTGAAGATTTA+TGG | - | chr4.2:26231178-26231197 | None:intergenic | 35.0% | |
| GTAATCATGTGAGAAAAAGG+AGG | - | chr4.2:26230391-26230410 | None:intergenic | 35.0% | |
| TACACTAAATCCCAATTTGG+TGG | + | chr4.2:26232385-26232404 | MS.gene82394:intron | 35.0% | |
| TACTTGCAGTTGCAAAATTC+AGG | - | chr4.2:26231022-26231041 | None:intergenic | 35.0% | |
| TATACAGGATTCCACCAAAT+TGG | - | chr4.2:26232399-26232418 | None:intergenic | 35.0% | |
| TATGTACTGTGCAATAAAGG+GGG | - | chr4.2:26231427-26231446 | None:intergenic | 35.0% | |
| TCAATCATTCTTCCATTGTC+GGG | + | chr4.2:26233634-26233653 | MS.gene82394:CDS | 35.0% | |
| TCTTACGAGTCTCAAGTTTA+AGG | - | chr4.2:26231815-26231834 | None:intergenic | 35.0% | |
| TCTTTGTAAGACGTTACAAG+TGG | + | chr4.2:26229995-26230014 | MS.gene82394:CDS | 35.0% | |
| TGATCTTGGGAACAACAATA+GGG | + | chr4.2:26233470-26233489 | MS.gene82394:CDS | 35.0% | |
| TGTTTGGTATGTCAGAATCA+TGG | + | chr4.2:26230243-26230262 | MS.gene82394:intron | 35.0% | |
| TTGAGACTCGTAAGAGTTTA+TGG | + | chr4.2:26231820-26231839 | MS.gene82394:intron | 35.0% | |
| TTGATCTTGGGAACAACAAT+AGG | + | chr4.2:26233469-26233488 | MS.gene82394:CDS | 35.0% | |
| TTGTGATTATGGCATACTCA+GGG | + | chr4.2:26230331-26230350 | MS.gene82394:intron | 35.0% | |
| TTTAGGGATGTTGCCATTAT+TGG | + | chr4.2:26231644-26231663 | MS.gene82394:intron | 35.0% | |
| ! | CAGGTTTTCTACTTTGACAT+TGG | + | chr4.2:26230437-26230456 | MS.gene82394:intron | 35.0% |
| ! | CTGCATTTGAATTTTGTGAC+GGG | + | chr4.2:26232215-26232234 | MS.gene82394:intron | 35.0% |
| ! | TGGATTTTGCAGTAAATGCT+GGG | + | chr4.2:26230795-26230814 | MS.gene82394:intron | 35.0% |
| ! | TTGGATTTTGCAGTAAATGC+TGG | + | chr4.2:26230794-26230813 | MS.gene82394:intron | 35.0% |
| !! | CACAGAAAAGTGGATTATAC+AGG | - | chr4.2:26232414-26232433 | None:intergenic | 35.0% |
| !!! | GGATTTTGACTACCATGTTT+AGG | - | chr4.2:26232304-26232323 | None:intergenic | 35.0% |
| ACACTCTCTTTCGCTCTAAT+TGG | + | chr4.2:26230501-26230520 | MS.gene82394:intron | 40.0% | |
| ACCTTCAAACCCACATTGAA+GGG | - | chr4.2:26231567-26231586 | None:intergenic | 40.0% | |
| AGCACTATAATTGTTCCTGC+AGG | + | chr4.2:26233053-26233072 | MS.gene82394:CDS | 40.0% | |
| AGGATGAAATTGGGAACTTG+GGG | + | chr4.2:26233406-26233425 | MS.gene82394:CDS | 40.0% | |
| AGTTTGACAAGCATGCTTCA+AGG | + | chr4.2:26232083-26232102 | MS.gene82394:intron | 40.0% | |
| ATCAAGAAACCAGGAAATGC+CGG | - | chr4.2:26230126-26230145 | None:intergenic | 40.0% | |
| CAACTGACATACCCTCAATT+CGG | - | chr4.2:26233711-26233730 | None:intergenic | 40.0% | |
| CAATCATTCTTCCATTGTCG+GGG | + | chr4.2:26233635-26233654 | MS.gene82394:CDS | 40.0% | |
| CACATTCAATTCAGAAGAGG+TGG | - | chr4.2:26233361-26233380 | None:intergenic | 40.0% | |
| CACCTCTTCTGAATTGAATG+TGG | + | chr4.2:26233359-26233378 | MS.gene82394:CDS | 40.0% | |
| CAGGATGAAATTGGGAACTT+GGG | + | chr4.2:26233405-26233424 | MS.gene82394:CDS | 40.0% | |
| CGACAATGGAAGAATGATTG+AGG | - | chr4.2:26233635-26233654 | None:intergenic | 40.0% | |
| CGACTACTTTCAGATGATGT+TGG | + | chr4.2:26233300-26233319 | MS.gene82394:CDS | 40.0% | |
| CGAGAACATGATGATATGCA+GGG | - | chr4.2:26230989-26231008 | None:intergenic | 40.0% | |
| CTGAAAAAACCTCTGCTACT+AGG | + | chr4.2:26230078-26230097 | MS.gene82394:CDS | 40.0% | |
| CTTCTGAATTGAATGTGGAC+AGG | + | chr4.2:26233364-26233383 | MS.gene82394:CDS | 40.0% | |
| CTTGTTAGACATTCCTAACG+TGG | + | chr4.2:26230821-26230840 | MS.gene82394:intron | 40.0% | |
| GACATTGGAGAGAATAGAAG+AGG | + | chr4.2:26230452-26230471 | MS.gene82394:CDS | 40.0% | |
| GAGAAATTAAGTGGGAAACG+GGG | - | chr4.2:26231353-26231372 | None:intergenic | 40.0% | |
| GAGAACATGATGATATGCAG+GGG | - | chr4.2:26230988-26231007 | None:intergenic | 40.0% | |
| GATCTTGGGAACAACAATAG+GGG | + | chr4.2:26233471-26233490 | MS.gene82394:CDS | 40.0% | |
| GGTCACTCTGATTGTGATTA+TGG | + | chr4.2:26230320-26230339 | MS.gene82394:intron | 40.0% | |
| GGTTCAAGGTAGTCAAAATC+AGG | - | chr4.2:26232821-26232840 | None:intergenic | 40.0% | |
| GTCCACATTCAATTCAGAAG+AGG | - | chr4.2:26233364-26233383 | None:intergenic | 40.0% | |
| TAAAACCGGTCTGCTTTACA+AGG | + | chr4.2:26232134-26232153 | MS.gene82394:intron | 40.0% | |
| TACCTTCAAACCCACATTGA+AGG | - | chr4.2:26231568-26231587 | None:intergenic | 40.0% | |
| TAGAAGAGGCCGTTTCTTAA+AGG | + | chr4.2:26230466-26230485 | MS.gene82394:CDS | 40.0% | |
| TAGTTCCTTGTAAAGCAGAC+CGG | - | chr4.2:26232142-26232161 | None:intergenic | 40.0% | |
| TATTATGCGGGTTCAATCTC+TGG | + | chr4.2:26230684-26230703 | MS.gene82394:intron | 40.0% | |
| TCACTTTGTGGAAATCACCA+AGG | + | chr4.2:26233684-26233703 | MS.gene82394:CDS | 40.0% | |
| TCAGGATGAAATTGGGAACT+TGG | + | chr4.2:26233404-26233423 | MS.gene82394:CDS | 40.0% | |
| TCGAGAACATGATGATATGC+AGG | - | chr4.2:26230990-26231009 | None:intergenic | 40.0% | |
| TGAATTGAATGTGGACAGGT+CGG | + | chr4.2:26233368-26233387 | MS.gene82394:CDS | 40.0% | |
| TGATTCTACGATTATGGTCG+CGG | + | chr4.2:26232437-26232456 | MS.gene82394:intron | 40.0% | |
| TTCAAAGCAACTAGGCTTTG+TGG | + | chr4.2:26230591-26230610 | MS.gene82394:intron | 40.0% | |
| TTCAATGTGGGTTTGAAGGT+AGG | + | chr4.2:26231567-26231586 | MS.gene82394:intron | 40.0% | |
| TTCTTCATTGCGGTAAAAGG+CGG | - | chr4.2:26230712-26230731 | None:intergenic | 40.0% | |
| TTTCTCTCCCATGAGGTATA+AGG | + | chr4.2:26230652-26230671 | MS.gene82394:intron | 40.0% | |
| TTTGCAATCAACTCCGGTAT+TGG | + | chr4.2:26232265-26232284 | MS.gene82394:intron | 40.0% | |
| ! | CTCTAGCTTCTGCAAAATCA+CGG | - | chr4.2:26230276-26230295 | None:intergenic | 40.0% |
| ! | GGATCAAGAACTTTTCAGCA+AGG | + | chr4.2:26230172-26230191 | MS.gene82394:CDS | 40.0% |
| ! | GTTATTTCATTGCAGGTTGC+AGG | + | chr4.2:26233598-26233617 | MS.gene82394:intron | 40.0% |
| ! | TCAAAGCAACTAGGCTTTGT+GGG | + | chr4.2:26230592-26230611 | MS.gene82394:intron | 40.0% |
| ! | TGAGATTGTTGGTCACTTTG+TGG | + | chr4.2:26233672-26233691 | MS.gene82394:CDS | 40.0% |
| ! | TGTATACTCGTACTTGGTGA+GGG | - | chr4.2:26232369-26232388 | None:intergenic | 40.0% |
| ! | TTGATCAGCTCTGATCACTT+TGG | - | chr4.2:26233436-26233455 | None:intergenic | 40.0% |
| ! | TTGCATGTGCTGTTACACAA+GGG | + | chr4.2:26231683-26231702 | MS.gene82394:intron | 40.0% |
| ! | TTTGCATGTGCTGTTACACA+AGG | + | chr4.2:26231682-26231701 | MS.gene82394:intron | 40.0% |
| !! | ATGAAACCTGATTCGGAAGA+AGG | - | chr4.2:26233151-26233170 | None:intergenic | 40.0% |
| !!! | AAAGTTTTGGTGCCTAAGCA+GGG | - | chr4.2:26233202-26233221 | None:intergenic | 40.0% |
| !!! | AGTTTTTTTTCCCCCTGCTT+AGG | + | chr4.2:26233187-26233206 | MS.gene82394:intron | 40.0% |
| !!! | GAGTAGACTTATTTTGGTGC+CGG | + | chr4.2:26230951-26230970 | MS.gene82394:intron | 40.0% |
| AATCACCAAGGACCGAATTG+AGG | + | chr4.2:26233696-26233715 | MS.gene82394:CDS | 45.0% | |
| ACCATCATCGTTCCTTTCTC+CGG | + | chr4.2:26230104-26230123 | MS.gene82394:CDS | 45.0% | |
| ACTCTACGTAGACTCGTGAA+GGG | + | chr4.2:26231788-26231807 | MS.gene82394:intron | 45.0% | |
| ATCACCAAGGACCGAATTGA+GGG | + | chr4.2:26233697-26233716 | MS.gene82394:CDS | 45.0% | |
| ATCAGAAATTCCACCACGGA+AGG | - | chr4.2:26231090-26231109 | None:intergenic | 45.0% | |
| ATCATGTTGAAGTCCTTCCG+TGG | + | chr4.2:26231074-26231093 | MS.gene82394:intron | 45.0% | |
| ATCATTCCTGGTCATCATGG+TGG | + | chr4.2:26230894-26230913 | MS.gene82394:intron | 45.0% | |
| ATCTTAAGGTAACGACCACG+AGG | - | chr4.2:26230056-26230075 | None:intergenic | 45.0% | |
| ATTAAGTGGGAAACGGGGTT+TGG | - | chr4.2:26231348-26231367 | None:intergenic | 45.0% | |
| CAACAGAAAGCGGCCAATAA+TGG | - | chr4.2:26231660-26231679 | None:intergenic | 45.0% | |
| CACATCATTCCTGGTCATCA+TGG | + | chr4.2:26230891-26230910 | MS.gene82394:intron | 45.0% | |
| CAGAGATTAATGAAGCCTCG+AGG | + | chr4.2:26233120-26233139 | MS.gene82394:CDS | 45.0% | |
| CTTCAAGGCATGTATCACAC+TGG | + | chr4.2:26232098-26232117 | MS.gene82394:intron | 45.0% | |
| CTTTCAGATGATGTTGGTGC+TGG | + | chr4.2:26233306-26233325 | MS.gene82394:CDS | 45.0% | |
| GATCTGAAAGAGAATCCTCG+TGG | + | chr4.2:26230038-26230057 | MS.gene82394:CDS | 45.0% | |
| GCATTTCAAGCAACCACGTT+AGG | - | chr4.2:26230837-26230856 | None:intergenic | 45.0% | |
| GGAATTGCAGCTTGATACCA+AGG | + | chr4.2:26230193-26230212 | MS.gene82394:CDS | 45.0% | |
| GGATGAAATTGGGAACTTGG+GGG | + | chr4.2:26233407-26233426 | MS.gene82394:CDS | 45.0% | |
| GTGGGTTTGAAGGTAGGAAA+GGG | + | chr4.2:26231573-26231592 | MS.gene82394:intron | 45.0% | |
| GTGTTTCTTTCTCTCCCATG+AGG | + | chr4.2:26230645-26230664 | MS.gene82394:intron | 45.0% | |
| TAGCTTCTGCAAAATCACGG+TGG | - | chr4.2:26230273-26230292 | None:intergenic | 45.0% | |
| TCATTCCTGGTCATCATGGT+GGG | + | chr4.2:26230895-26230914 | MS.gene82394:intron | 45.0% | |
| TCTTCATTGCGGTAAAAGGC+GGG | - | chr4.2:26230711-26230730 | None:intergenic | 45.0% | |
| TGCCAGCTCAGGATGAAATT+GGG | + | chr4.2:26233397-26233416 | MS.gene82394:CDS | 45.0% | |
| TGGGTTTGAAGGTAGGAAAG+GGG | + | chr4.2:26231574-26231593 | MS.gene82394:intron | 45.0% | |
| TGTGGGTTTGAAGGTAGGAA+AGG | + | chr4.2:26231572-26231591 | MS.gene82394:intron | 45.0% | |
| TTCAATTCAGAAGAGGTGGC+AGG | - | chr4.2:26233357-26233376 | None:intergenic | 45.0% | |
| TTCCCAATTTCATCCTGAGC+TGG | - | chr4.2:26233402-26233421 | None:intergenic | 45.0% | |
| TTGCCAGCTCAGGATGAAAT+TGG | + | chr4.2:26233396-26233415 | MS.gene82394:CDS | 45.0% | |
| TTTGAAGGTAGGAAAGGGGA+GGG | + | chr4.2:26231578-26231597 | MS.gene82394:intron | 45.0% | |
| TTTGAGGGGGATCAATTGTG+CGG | - | chr4.2:26233741-26233760 | None:intergenic | 45.0% | |
| ! | CAAAGCAACTAGGCTTTGTG+GGG | + | chr4.2:26230593-26230612 | MS.gene82394:intron | 45.0% |
| ! | GCTTTTCCTTCTTCCGAATC+AGG | + | chr4.2:26233142-26233161 | MS.gene82394:CDS | 45.0% |
| ! | GTGTATACTCGTACTTGGTG+AGG | - | chr4.2:26232370-26232389 | None:intergenic | 45.0% |
| !! | GGCTTTGTGGGGTTTTCAAT+TGG | + | chr4.2:26230604-26230623 | MS.gene82394:intron | 45.0% |
| !!! | AAGTTTTGGTGCCTAAGCAG+GGG | - | chr4.2:26233201-26233220 | None:intergenic | 45.0% |
| !!! | ATTTTGTGACGGGTGACACT+AGG | + | chr4.2:26232225-26232244 | MS.gene82394:intron | 45.0% |
| !!! | GAAAGTTTTGGTGCCTAAGC+AGG | - | chr4.2:26233203-26233222 | None:intergenic | 45.0% |
| !!! | TAGACTTATTTTGGTGCCGG+TGG | + | chr4.2:26230954-26230973 | MS.gene82394:intron | 45.0% |
| AACCAGGAAATGCCGGAGAA+AGG | - | chr4.2:26230119-26230138 | None:intergenic | 50.0% | |
| AAGTTCCAGGGATGAAGGGT+GGG | + | chr4.2:26233076-26233095 | MS.gene82394:CDS | 50.0% | |
| ATCTACCCACCATGATGACC+AGG | - | chr4.2:26230903-26230922 | None:intergenic | 50.0% | |
| ATCTGAAAGTAGTCGCTCCG+AGG | - | chr4.2:26233295-26233314 | None:intergenic | 50.0% | |
| ATGTTGAAGTCCTTCCGTGG+TGG | + | chr4.2:26231077-26231096 | MS.gene82394:intron | 50.0% | |
| CAGGAAGTTCCAGGGATGAA+GGG | + | chr4.2:26233072-26233091 | MS.gene82394:CDS | 50.0% | |
| CATACCCTCAATTCGGTCCT+TGG | - | chr4.2:26233704-26233723 | None:intergenic | 50.0% | |
| CCACATTGAAGGGCAAGCAT+CGG | - | chr4.2:26231557-26231576 | None:intergenic | 50.0% | |
| CGATGCTTGCCCTTCAATGT+GGG | + | chr4.2:26231555-26231574 | MS.gene82394:intron | 50.0% | |
| CTTCATTGCGGTAAAAGGCG+GGG | - | chr4.2:26230710-26230729 | None:intergenic | 50.0% | |
| GACTCTACGTAGACTCGTGA+AGG | + | chr4.2:26231787-26231806 | MS.gene82394:intron | 50.0% | |
| GATGGTAGACCTAGTAGCAG+AGG | - | chr4.2:26230090-26230109 | None:intergenic | 50.0% | |
| GCCCTTCAATGTGGGTTTGA+AGG | + | chr4.2:26231563-26231582 | MS.gene82394:intron | 50.0% | |
| GGCAGCATTCAGGAACATTC+TGG | + | chr4.2:26233097-26233116 | MS.gene82394:CDS | 50.0% | |
| GTTTGAAGGTAGGAAAGGGG+AGG | + | chr4.2:26231577-26231596 | MS.gene82394:intron | 50.0% | |
| TCTGACTCCTAGATAGAGCC+TGG | + | chr4.2:26231374-26231393 | MS.gene82394:intron | 50.0% | |
| TGTTCCTGCAGGAAGTTCCA+GGG | + | chr4.2:26233064-26233083 | MS.gene82394:CDS | 50.0% | |
| TTCCTTTCTCCGGCATTTCC+TGG | + | chr4.2:26230114-26230133 | MS.gene82394:CDS | 50.0% | |
| TTCTACGATTATGGTCGCGG+TGG | + | chr4.2:26232440-26232459 | MS.gene82394:intron | 50.0% | |
| TTGAAGGTAGGAAAGGGGAG+GGG | + | chr4.2:26231579-26231598 | MS.gene82394:intron | 50.0% | |
| TTGTTCCTGCAGGAAGTTCC+AGG | + | chr4.2:26233063-26233082 | MS.gene82394:CDS | 50.0% | |
| ! | TGTCTGAAGCTTCTGTCAGC+AGG | + | chr4.2:26233024-26233043 | MS.gene82394:CDS | 50.0% |
| !! | CACTTCACTTGGTGCGTGTT+TGG | + | chr4.2:26230227-26230246 | MS.gene82394:intron | 50.0% |
| !! | GGTGAAAGGCGTTGAAAACC+AGG | + | chr4.2:26231601-26231620 | MS.gene82394:intron | 50.0% |
| !! | GTTGGTGCTGGCTTCATATC+TGG | + | chr4.2:26233318-26233337 | MS.gene82394:CDS | 50.0% |
| !! | TTGAAGGGCAAGCATCGGAT+AGG | - | chr4.2:26231552-26231571 | None:intergenic | 50.0% |
| !!! | AGTTTTGGTGCCTAAGCAGG+GGG | - | chr4.2:26233200-26233219 | None:intergenic | 50.0% |
| AACTGCTTGAGCCCCGACAA+TGG | - | chr4.2:26233649-26233668 | None:intergenic | 55.0% | |
| AAGTGGGAAACGGGGTTTGG+AGG | - | chr4.2:26231345-26231364 | None:intergenic | 55.0% | |
| ATGAAGGGTGGGCAGCATTC+AGG | + | chr4.2:26233087-26233106 | MS.gene82394:CDS | 55.0% | |
| CCGATGCTTGCCCTTCAATG+TGG | + | chr4.2:26231554-26231573 | MS.gene82394:intron | 55.0% | |
| CGGAAGAAGGAAAAGCCTCG+AGG | - | chr4.2:26233138-26233157 | None:intergenic | 55.0% | |
| GAAGTTCCAGGGATGAAGGG+TGG | + | chr4.2:26233075-26233094 | MS.gene82394:CDS | 55.0% | |
| GCAGGAAGTTCCAGGGATGA+AGG | + | chr4.2:26233071-26233090 | MS.gene82394:CDS | 55.0% | |
| GCCGGAGAAAGGAACGATGA+TGG | - | chr4.2:26230108-26230127 | None:intergenic | 55.0% | |
| TACGATTATGGTCGCGGTGG+TGG | + | chr4.2:26232443-26232462 | MS.gene82394:intron | 55.0% | |
| TCATCCCTGGAACTTCCTGC+AGG | - | chr4.2:26233071-26233090 | None:intergenic | 55.0% | |
| TGAAGGTAGGAAAGGGGAGG+GGG | + | chr4.2:26231580-26231599 | MS.gene82394:intron | 55.0% | |
| TGCAGGGGTTTGATCTCCAC+CGG | - | chr4.2:26230973-26230992 | None:intergenic | 55.0% | |
| !! | CGCGGTGGTGGAACTACAAA+AGG | + | chr4.2:26232455-26232474 | MS.gene82394:intron | 55.0% |
| !! | GTCGGTTGATTTGCCAGCTC+AGG | + | chr4.2:26233386-26233405 | MS.gene82394:CDS | 55.0% |
| AGGAAAGGGGAGGGGGTGAA+AGG | + | chr4.2:26231587-26231606 | MS.gene82394:intron | 60.0% | |
| GAAACGGGGTTTGGAGGAGG+AGG | - | chr4.2:26231339-26231358 | None:intergenic | 60.0% | |
| TGGGAAACGGGGTTTGGAGG+AGG | - | chr4.2:26231342-26231361 | None:intergenic | 60.0% | |
| TTTGGAGGAGGAGGAGGAGG+AGG | - | chr4.2:26231330-26231349 | None:intergenic | 60.0% | |
| ACGGGGTTTGGAGGAGGAGG+AGG | - | chr4.2:26231336-26231355 | None:intergenic | 65.0% | |
| GAGGAGGAGGAGGAGGAGGA+AGG | - | chr4.2:26231326-26231345 | None:intergenic | 65.0% | |
| GGGTTTGGAGGAGGAGGAGG+AGG | - | chr4.2:26231333-26231352 | None:intergenic | 65.0% | |
| TGCTGCCCACCCTTCATCCC+TGG | - | chr4.2:26233084-26233103 | None:intergenic | 65.0% | |
| ! | GGTGGTAGTAGCGGTGGTGG+AGG | + | chr4.2:26229948-26229967 | MS.gene82394:CDS | 65.0% |
| !! | AGGTGGAGGTGGTGCTGACG+TGG | + | chr4.2:26229968-26229987 | MS.gene82394:CDS | 65.0% |
| !! | AGTAGCGGTGGTGGAGGTGG+AGG | + | chr4.2:26229954-26229973 | MS.gene82394:CDS | 65.0% |
| !! | GGTAGTAGCGGTGGTGGAGG+TGG | + | chr4.2:26229951-26229970 | MS.gene82394:CDS | 65.0% |
| ATGGAGGGAAGCTCCGGGGG+TGG | + | chr4.2:26229912-26229931 | MS.gene82394:CDS | 70.0% | |
| GGCGGTGGTAGTAGCGGTGG+TGG | + | chr4.2:26229945-26229964 | MS.gene82394:CDS | 70.0% | |
| !! | AGCGGTGGTGGAGGTGGAGG+TGG | + | chr4.2:26229957-26229976 | MS.gene82394:CDS | 70.0% |
| GAGGGAAGCTCCGGGGGTGG+TGG | + | chr4.2:26229915-26229934 | MS.gene82394:CDS | 75.0% | |
| GGCGGCGGCGGTGGTAGTAG+CGG | + | chr4.2:26229939-26229958 | MS.gene82394:CDS | 75.0% | |
| GGCGGCGGTGGTAGTAGCGG+TGG | + | chr4.2:26229942-26229961 | MS.gene82394:CDS | 75.0% | |
| ! | GGAAGCTCCGGGGGTGGTGG+CGG | + | chr4.2:26229918-26229937 | MS.gene82394:CDS | 75.0% |
| !!! | AGCTCCGGGGGTGGTGGCGG+CGG | + | chr4.2:26229921-26229940 | MS.gene82394:CDS | 80.0% |
| !!! | TCCGGGGGTGGTGGCGGCGG+CGG | + | chr4.2:26229924-26229943 | MS.gene82394:CDS | 85.0% |
| ! | GCCGCCGCCGCCACCACCCC+CGG | - | chr4.2:26229928-26229947 | None:intergenic | 90.0% |
| !!! | GGGGGTGGTGGCGGCGGCGG+CGG | + | chr4.2:26229927-26229946 | MS.gene82394:CDS | 90.0% |
| !!! | GGTGGTGGCGGCGGCGGCGG+TGG | + | chr4.2:26229930-26229949 | MS.gene82394:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 26229912 | 26233765 | 26229912 | ID=MS.gene82394 |
| chr4.2 | mRNA | 26229912 | 26233765 | 26229912 | ID=MS.gene82394.t1;Parent=MS.gene82394 |
| chr4.2 | exon | 26229912 | 26230214 | 26229912 | ID=MS.gene82394.t1.exon1;Parent=MS.gene82394.t1 |
| chr4.2 | CDS | 26229912 | 26230214 | 26229912 | ID=cds.MS.gene82394.t1;Parent=MS.gene82394.t1 |
| chr4.2 | exon | 26230440 | 26230487 | 26230440 | ID=MS.gene82394.t1.exon2;Parent=MS.gene82394.t1 |
| chr4.2 | CDS | 26230440 | 26230487 | 26230440 | ID=cds.MS.gene82394.t1;Parent=MS.gene82394.t1 |
| chr4.2 | exon | 26233023 | 26233163 | 26233023 | ID=MS.gene82394.t1.exon3;Parent=MS.gene82394.t1 |
| chr4.2 | CDS | 26233023 | 26233163 | 26233023 | ID=cds.MS.gene82394.t1;Parent=MS.gene82394.t1 |
| chr4.2 | exon | 26233279 | 26233515 | 26233279 | ID=MS.gene82394.t1.exon4;Parent=MS.gene82394.t1 |
| chr4.2 | CDS | 26233279 | 26233515 | 26233279 | ID=cds.MS.gene82394.t1;Parent=MS.gene82394.t1 |
| chr4.2 | exon | 26233613 | 26233765 | 26233613 | ID=MS.gene82394.t1.exon5;Parent=MS.gene82394.t1 |
| chr4.2 | CDS | 26233613 | 26233765 | 26233613 | ID=cds.MS.gene82394.t1;Parent=MS.gene82394.t1 |
| Gene Sequence |
| Protein sequence |
