Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82921.t1 | RHN49819.1 | 91.3 | 299 | 23 | 1 | 4 | 299 | 87 | 385 | 4.50E-152 | 547.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82921.t1 | Q9LII9 | 56.5 | 276 | 111 | 3 | 32 | 304 | 25 | 294 | 1.2e-81 | 304.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82921.t1 | A0A072U518 | 91.3 | 299 | 23 | 1 | 4 | 299 | 6 | 304 | 3.2e-152 | 547.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene82921 | 0.802982 | 4.33E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene82921 | 0.806701 | 7.24E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene82921 | 0.810997 | 8.72E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene82921 | 0.819954 | 8.85E-53 | -1.69E-46 |
| MS.gene056069 | MS.gene82921 | -0.807049 | 6.11E-50 | -1.69E-46 |
| MS.gene057260 | MS.gene82921 | 0.809498 | 1.84E-50 | -1.69E-46 |
| MS.gene057439 | MS.gene82921 | 0.803948 | 2.73E-49 | -1.69E-46 |
| MS.gene060476 | MS.gene82921 | 0.806463 | 8.13E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82921.t1 | MTR_6g007095 | 91.391 | 302 | 22 | 2 | 1 | 299 | 4 | 304 | 0.0 | 558 |
| MS.gene82921.t1 | MTR_6g007095 | 85.827 | 254 | 35 | 1 | 47 | 299 | 378 | 631 | 1.72e-150 | 439 |
| MS.gene82921.t1 | MTR_6g007090 | 78.808 | 302 | 58 | 3 | 1 | 299 | 4 | 302 | 2.90e-169 | 475 |
| MS.gene82921.t1 | MTR_6g007100 | 77.228 | 303 | 51 | 6 | 1 | 299 | 4 | 292 | 2.80e-161 | 454 |
| MS.gene82921.t1 | MTR_8g038680 | 67.987 | 303 | 77 | 3 | 4 | 299 | 6 | 295 | 6.04e-144 | 410 |
| MS.gene82921.t1 | MTR_8g012540 | 66.667 | 303 | 81 | 3 | 4 | 299 | 6 | 295 | 5.09e-142 | 405 |
| MS.gene82921.t1 | MTR_7g033165 | 54.610 | 282 | 113 | 4 | 31 | 301 | 25 | 302 | 3.24e-101 | 300 |
| MS.gene82921.t1 | MTR_7g033165 | 54.643 | 280 | 112 | 4 | 31 | 299 | 25 | 300 | 3.50e-99 | 297 |
| MS.gene82921.t1 | MTR_8g089805 | 48.311 | 296 | 136 | 4 | 15 | 299 | 16 | 305 | 4.28e-91 | 277 |
| MS.gene82921.t1 | MTR_1g030220 | 50.538 | 279 | 123 | 4 | 30 | 299 | 31 | 303 | 4.96e-88 | 269 |
| MS.gene82921.t1 | MTR_7g087190 | 47.541 | 305 | 142 | 4 | 13 | 305 | 17 | 315 | 2.52e-87 | 267 |
| MS.gene82921.t1 | MTR_7g033155 | 46.645 | 313 | 141 | 4 | 11 | 299 | 10 | 320 | 1.15e-86 | 266 |
| MS.gene82921.t1 | MTR_7g033150 | 46.358 | 302 | 140 | 6 | 13 | 299 | 12 | 306 | 4.93e-82 | 253 |
| MS.gene82921.t1 | MTR_1g030340 | 47.782 | 293 | 133 | 6 | 19 | 299 | 22 | 306 | 6.57e-81 | 251 |
| MS.gene82921.t1 | MTR_1g030230 | 44.595 | 296 | 142 | 7 | 13 | 299 | 13 | 295 | 4.11e-76 | 238 |
| MS.gene82921.t1 | MTR_1g030268 | 46.182 | 275 | 133 | 5 | 35 | 300 | 36 | 304 | 6.08e-74 | 231 |
| MS.gene82921.t1 | MTR_1g030268 | 46.350 | 274 | 132 | 5 | 35 | 299 | 36 | 303 | 8.90e-73 | 229 |
| MS.gene82921.t1 | MTR_1g030275 | 42.905 | 296 | 147 | 6 | 13 | 299 | 20 | 302 | 2.13e-70 | 223 |
| MS.gene82921.t1 | MTR_7g113860 | 45.756 | 271 | 134 | 5 | 37 | 299 | 27 | 292 | 8.98e-70 | 222 |
| MS.gene82921.t1 | MTR_1g082390 | 42.958 | 284 | 145 | 7 | 30 | 304 | 22 | 297 | 8.27e-68 | 216 |
| MS.gene82921.t1 | MTR_7g113860 | 42.157 | 306 | 149 | 8 | 3 | 299 | 12 | 298 | 1.75e-67 | 216 |
| MS.gene82921.t1 | MTR_8g089805 | 47.321 | 224 | 101 | 4 | 87 | 299 | 20 | 237 | 1.04e-63 | 204 |
| MS.gene82921.t1 | MTR_7g111780 | 43.233 | 266 | 135 | 7 | 39 | 299 | 36 | 290 | 5.94e-58 | 191 |
| MS.gene82921.t1 | MTR_7g116870 | 37.681 | 276 | 152 | 4 | 34 | 299 | 28 | 293 | 1.26e-55 | 185 |
| MS.gene82921.t1 | MTR_1g030265 | 44.144 | 222 | 109 | 5 | 87 | 299 | 53 | 268 | 4.92e-55 | 183 |
| MS.gene82921.t1 | MTR_8g028160 | 36.545 | 301 | 175 | 6 | 11 | 299 | 12 | 308 | 6.72e-55 | 183 |
| MS.gene82921.t1 | MTR_7g113860 | 41.441 | 222 | 118 | 4 | 85 | 299 | 8 | 224 | 2.51e-47 | 162 |
| MS.gene82921.t1 | MTR_7g111780 | 42.500 | 200 | 101 | 5 | 103 | 299 | 3 | 191 | 1.95e-39 | 140 |
| MS.gene82921.t1 | MTR_8g012520 | 52.381 | 126 | 30 | 1 | 172 | 297 | 7 | 102 | 4.10e-35 | 124 |
| MS.gene82921.t1 | MTR_2g015650 | 32.013 | 303 | 185 | 8 | 11 | 299 | 3 | 298 | 7.30e-34 | 127 |
| MS.gene82921.t1 | MTR_2g079080 | 31.270 | 307 | 185 | 10 | 5 | 299 | 1 | 293 | 3.58e-33 | 125 |
| MS.gene82921.t1 | MTR_2g079090 | 30.945 | 307 | 186 | 10 | 5 | 299 | 1 | 293 | 1.88e-32 | 124 |
| MS.gene82921.t1 | MTR_0029s0050 | 31.596 | 307 | 184 | 10 | 5 | 299 | 1 | 293 | 2.49e-32 | 123 |
| MS.gene82921.t1 | MTR_2g015670 | 32.624 | 282 | 159 | 8 | 30 | 299 | 22 | 284 | 4.19e-32 | 122 |
| MS.gene82921.t1 | MTR_0029s0100 | 32.423 | 293 | 172 | 10 | 5 | 285 | 1 | 279 | 4.96e-32 | 122 |
| MS.gene82921.t1 | MTR_2g015590 | 28.920 | 287 | 184 | 7 | 29 | 301 | 21 | 301 | 2.65e-31 | 120 |
| MS.gene82921.t1 | MTR_4g104240 | 32.727 | 275 | 167 | 9 | 40 | 304 | 40 | 306 | 9.85e-31 | 119 |
| MS.gene82921.t1 | MTR_3g448360 | 32.323 | 297 | 167 | 11 | 5 | 285 | 1 | 279 | 1.92e-30 | 118 |
| MS.gene82921.t1 | MTR_2g015580 | 33.449 | 287 | 153 | 10 | 37 | 299 | 45 | 317 | 2.38e-30 | 119 |
| MS.gene82921.t1 | MTR_2g015590 | 28.772 | 285 | 183 | 7 | 29 | 299 | 21 | 299 | 3.69e-30 | 117 |
| MS.gene82921.t1 | MTR_3g463960 | 33.459 | 266 | 148 | 7 | 37 | 285 | 42 | 295 | 5.55e-28 | 112 |
| MS.gene82921.t1 | MTR_3g463950 | 33.459 | 266 | 148 | 7 | 37 | 285 | 42 | 295 | 5.55e-28 | 112 |
| MS.gene82921.t1 | MTR_3g463970 | 33.459 | 266 | 148 | 7 | 37 | 285 | 42 | 295 | 5.55e-28 | 112 |
| MS.gene82921.t1 | MTR_3g463940 | 33.459 | 266 | 148 | 7 | 37 | 285 | 42 | 295 | 5.55e-28 | 112 |
| MS.gene82921.t1 | MTR_2g043980 | 33.333 | 288 | 144 | 10 | 30 | 291 | 25 | 290 | 6.02e-28 | 111 |
| MS.gene82921.t1 | MTR_8g031430 | 29.333 | 300 | 180 | 8 | 11 | 299 | 10 | 288 | 1.76e-27 | 110 |
| MS.gene82921.t1 | MTR_3g069780 | 29.605 | 304 | 182 | 9 | 11 | 299 | 7 | 293 | 2.00e-27 | 110 |
| MS.gene82921.t1 | MTR_3g463930 | 34.173 | 278 | 151 | 10 | 29 | 285 | 36 | 302 | 2.05e-27 | 110 |
| MS.gene82921.t1 | MTR_8g079050 | 28.981 | 314 | 185 | 11 | 8 | 299 | 6 | 303 | 3.47e-27 | 109 |
| MS.gene82921.t1 | MTR_8g031420 | 28.239 | 301 | 184 | 8 | 9 | 299 | 8 | 286 | 6.43e-27 | 108 |
| MS.gene82921.t1 | MTR_3g438030 | 29.355 | 310 | 185 | 10 | 5 | 299 | 3 | 293 | 7.87e-27 | 108 |
| MS.gene82921.t1 | MTR_1g025720 | 30.619 | 307 | 172 | 10 | 13 | 299 | 11 | 296 | 1.26e-26 | 107 |
| MS.gene82921.t1 | MTR_8g012460 | 60.000 | 90 | 31 | 3 | 172 | 258 | 24 | 111 | 1.44e-26 | 101 |
| MS.gene82921.t1 | MTR_2g015630 | 31.786 | 280 | 154 | 11 | 44 | 299 | 36 | 302 | 1.04e-25 | 105 |
| MS.gene82921.t1 | MTR_3g069520 | 30.508 | 295 | 173 | 8 | 5 | 285 | 1 | 277 | 2.51e-25 | 104 |
| MS.gene82921.t1 | MTR_8g031390 | 30.112 | 269 | 162 | 8 | 39 | 299 | 37 | 287 | 4.27e-25 | 103 |
| MS.gene82921.t1 | MTR_5g078210 | 30.128 | 312 | 169 | 12 | 13 | 304 | 7 | 289 | 4.69e-25 | 103 |
| MS.gene82921.t1 | MTR_8g031390 | 30.112 | 269 | 162 | 8 | 39 | 299 | 37 | 287 | 9.13e-25 | 103 |
| MS.gene82921.t1 | MTR_5g078210 | 30.619 | 307 | 164 | 12 | 13 | 299 | 7 | 284 | 4.72e-24 | 100 |
| MS.gene82921.t1 | MTR_1g025700 | 30.142 | 282 | 156 | 10 | 38 | 299 | 49 | 309 | 5.56e-24 | 100 |
| MS.gene82921.t1 | MTR_0565s0010 | 30.686 | 277 | 162 | 9 | 38 | 299 | 31 | 292 | 2.54e-23 | 99.0 |
| MS.gene82921.t1 | MTR_3g005650 | 29.078 | 282 | 167 | 7 | 38 | 305 | 29 | 291 | 2.63e-23 | 99.0 |
| MS.gene82921.t1 | MTR_8g031400 | 29.699 | 266 | 168 | 6 | 39 | 299 | 37 | 288 | 2.89e-23 | 99.0 |
| MS.gene82921.t1 | MTR_2g033930 | 26.603 | 312 | 190 | 10 | 1 | 299 | 5 | 290 | 4.20e-23 | 98.2 |
| MS.gene82921.t1 | MTR_3g052480 | 29.286 | 280 | 165 | 10 | 38 | 299 | 32 | 296 | 1.63e-22 | 96.7 |
| MS.gene82921.t1 | MTR_1g082410 | 30.450 | 289 | 117 | 9 | 30 | 292 | 21 | 251 | 1.72e-22 | 95.9 |
| MS.gene82921.t1 | MTR_4g122200 | 26.756 | 299 | 184 | 10 | 14 | 299 | 19 | 295 | 2.77e-22 | 96.3 |
| MS.gene82921.t1 | MTR_8g022810 | 29.630 | 297 | 179 | 9 | 1 | 284 | 3 | 282 | 4.26e-22 | 95.9 |
| MS.gene82921.t1 | MTR_8g087870 | 28.148 | 270 | 168 | 9 | 29 | 283 | 14 | 272 | 5.04e-22 | 95.1 |
| MS.gene82921.t1 | MTR_1g025680 | 29.032 | 279 | 164 | 8 | 38 | 299 | 33 | 294 | 6.45e-22 | 95.9 |
| MS.gene82921.t1 | MTR_0009s0250 | 27.778 | 306 | 187 | 14 | 11 | 305 | 8 | 290 | 4.43e-21 | 92.4 |
| MS.gene82921.t1 | MTR_2g044100 | 28.044 | 271 | 172 | 6 | 39 | 299 | 43 | 300 | 1.52e-20 | 91.7 |
| MS.gene82921.t1 | MTR_8g014910 | 28.571 | 301 | 179 | 10 | 13 | 299 | 13 | 291 | 2.66e-20 | 90.5 |
| MS.gene82921.t1 | MTR_3g023220 | 26.885 | 305 | 183 | 10 | 34 | 315 | 23 | 310 | 3.14e-20 | 90.1 |
| MS.gene82921.t1 | MTR_3g024510 | 28.986 | 276 | 167 | 7 | 38 | 299 | 37 | 297 | 3.74e-20 | 90.1 |
| MS.gene82921.t1 | MTR_3g052490 | 29.391 | 279 | 165 | 10 | 38 | 299 | 31 | 294 | 4.46e-20 | 89.7 |
| MS.gene82921.t1 | MTR_2g043990 | 31.119 | 286 | 131 | 9 | 30 | 291 | 87 | 330 | 4.53e-20 | 89.4 |
| MS.gene82921.t1 | MTR_2g033920 | 28.777 | 278 | 170 | 9 | 39 | 302 | 35 | 298 | 5.50e-20 | 89.0 |
| MS.gene82921.t1 | MTR_3g021460 | 29.936 | 314 | 175 | 15 | 3 | 298 | 2 | 288 | 6.40e-20 | 89.4 |
| MS.gene82921.t1 | MTR_3g114090 | 28.929 | 280 | 165 | 10 | 37 | 299 | 34 | 296 | 8.94e-20 | 89.0 |
| MS.gene82921.t1 | MTR_8g022810 | 31.707 | 246 | 140 | 8 | 1 | 233 | 3 | 233 | 1.02e-19 | 88.2 |
| MS.gene82921.t1 | MTR_2g033920 | 28.720 | 289 | 180 | 9 | 39 | 314 | 35 | 310 | 1.30e-19 | 88.6 |
| MS.gene82921.t1 | MTR_5g009100 | 30.147 | 272 | 158 | 11 | 44 | 299 | 51 | 306 | 1.33e-19 | 88.6 |
| MS.gene82921.t1 | MTR_4g056280 | 29.236 | 301 | 180 | 10 | 10 | 299 | 11 | 289 | 1.60e-19 | 88.2 |
| MS.gene82921.t1 | MTR_8g087890 | 30.035 | 283 | 155 | 11 | 38 | 299 | 30 | 290 | 3.52e-19 | 87.4 |
| MS.gene82921.t1 | MTR_8g022790 | 30.403 | 273 | 162 | 8 | 34 | 292 | 29 | 287 | 5.39e-19 | 86.7 |
| MS.gene82921.t1 | MTR_4g035353 | 27.331 | 311 | 177 | 12 | 1 | 294 | 8 | 286 | 5.44e-19 | 86.7 |
| MS.gene82921.t1 | MTR_5g022630 | 29.455 | 275 | 169 | 8 | 38 | 299 | 42 | 304 | 5.91e-19 | 86.7 |
| MS.gene82921.t1 | MTR_3g098270 | 27.451 | 306 | 197 | 8 | 8 | 299 | 3 | 297 | 6.23e-19 | 86.7 |
| MS.gene82921.t1 | MTR_5g093090 | 27.778 | 306 | 186 | 11 | 11 | 299 | 3 | 290 | 1.10e-18 | 85.1 |
| MS.gene82921.t1 | MTR_5g093090 | 27.778 | 306 | 186 | 11 | 11 | 299 | 3 | 290 | 2.17e-18 | 85.1 |
| MS.gene82921.t1 | MTR_2g100620 | 28.782 | 271 | 164 | 8 | 36 | 292 | 28 | 283 | 3.16e-18 | 84.3 |
| MS.gene82921.t1 | MTR_1g079540 | 29.391 | 279 | 161 | 11 | 39 | 299 | 31 | 291 | 5.81e-18 | 84.0 |
| MS.gene82921.t1 | MTR_2g461580 | 30.797 | 276 | 152 | 12 | 30 | 286 | 22 | 277 | 9.35e-18 | 83.2 |
| MS.gene82921.t1 | MTR_8g075200 | 27.597 | 308 | 168 | 12 | 15 | 299 | 25 | 300 | 1.09e-17 | 83.2 |
| MS.gene82921.t1 | MTR_3g082830 | 28.462 | 260 | 161 | 8 | 38 | 285 | 37 | 283 | 1.58e-17 | 82.4 |
| MS.gene82921.t1 | MTR_1g025760 | 27.356 | 329 | 187 | 12 | 1 | 305 | 46 | 346 | 1.65e-17 | 82.8 |
| MS.gene82921.t1 | MTR_5g074270 | 26.974 | 304 | 183 | 11 | 13 | 298 | 10 | 292 | 3.09e-17 | 81.6 |
| MS.gene82921.t1 | MTR_8g075220 | 28.115 | 313 | 165 | 13 | 15 | 299 | 24 | 304 | 4.07e-17 | 81.3 |
| MS.gene82921.t1 | MTR_1g025910 | 27.306 | 271 | 175 | 8 | 44 | 304 | 41 | 299 | 5.04e-17 | 81.3 |
| MS.gene82921.t1 | MTR_3g005660 | 27.957 | 279 | 170 | 10 | 38 | 299 | 35 | 299 | 8.18e-17 | 80.5 |
| MS.gene82921.t1 | MTR_1g025780 | 26.596 | 282 | 165 | 11 | 38 | 299 | 40 | 299 | 1.53e-16 | 79.7 |
| MS.gene82921.t1 | MTR_2g058390 | 52.308 | 65 | 30 | 1 | 167 | 230 | 5 | 69 | 2.22e-16 | 73.2 |
| MS.gene82921.t1 | MTR_1g069175 | 27.957 | 279 | 167 | 10 | 39 | 299 | 33 | 295 | 2.32e-16 | 79.3 |
| MS.gene82921.t1 | MTR_2g017955 | 30.000 | 260 | 154 | 10 | 38 | 283 | 32 | 277 | 2.91e-16 | 79.0 |
| MS.gene82921.t1 | MTR_2g017965 | 29.572 | 257 | 149 | 8 | 34 | 274 | 28 | 268 | 3.30e-16 | 79.0 |
| MS.gene82921.t1 | MTR_3g052580 | 27.431 | 288 | 166 | 11 | 38 | 303 | 27 | 293 | 3.71e-16 | 78.6 |
| MS.gene82921.t1 | MTR_7g116570 | 25.725 | 276 | 175 | 8 | 39 | 299 | 34 | 294 | 4.49e-16 | 78.6 |
| MS.gene82921.t1 | MTR_3g052580 | 27.431 | 288 | 166 | 11 | 38 | 303 | 26 | 292 | 5.95e-16 | 78.2 |
| MS.gene82921.t1 | MTR_7g116520 | 29.032 | 279 | 162 | 10 | 39 | 299 | 34 | 294 | 7.53e-16 | 77.8 |
| MS.gene82921.t1 | MTR_1g092690 | 22.549 | 306 | 203 | 6 | 1 | 298 | 8 | 287 | 1.03e-15 | 77.4 |
| MS.gene82921.t1 | MTR_5g022640 | 29.371 | 286 | 154 | 12 | 38 | 299 | 42 | 303 | 1.16e-15 | 77.0 |
| MS.gene82921.t1 | MTR_1g092750 | 26.182 | 275 | 173 | 7 | 28 | 300 | 34 | 280 | 1.26e-15 | 77.0 |
| MS.gene82921.t1 | MTR_5g084750 | 26.299 | 308 | 187 | 11 | 1 | 293 | 1 | 283 | 1.56e-15 | 76.6 |
| MS.gene82921.t1 | MTR_3g435540 | 27.206 | 272 | 168 | 9 | 43 | 299 | 27 | 283 | 1.77e-15 | 76.6 |
| MS.gene82921.t1 | MTR_2g017925 | 30.268 | 261 | 152 | 9 | 38 | 283 | 32 | 277 | 2.15e-15 | 76.3 |
| MS.gene82921.t1 | MTR_2g084585 | 28.058 | 278 | 171 | 11 | 36 | 299 | 27 | 289 | 2.46e-15 | 76.3 |
| MS.gene82921.t1 | MTR_3g464730 | 27.124 | 306 | 185 | 12 | 5 | 298 | 4 | 283 | 3.28e-15 | 75.9 |
| MS.gene82921.t1 | MTR_5g084770 | 26.498 | 317 | 187 | 12 | 5 | 303 | 4 | 292 | 3.64e-15 | 75.5 |
| MS.gene82921.t1 | MTR_1g092760 | 26.415 | 265 | 165 | 7 | 40 | 300 | 40 | 278 | 3.83e-15 | 75.5 |
| MS.gene82921.t1 | MTR_4g056160 | 27.972 | 286 | 166 | 12 | 34 | 299 | 22 | 287 | 6.06e-15 | 75.1 |
| MS.gene82921.t1 | MTR_1g024890 | 26.812 | 276 | 172 | 9 | 39 | 299 | 32 | 292 | 6.61e-15 | 75.1 |
| MS.gene82921.t1 | MTR_5g084790 | 27.138 | 269 | 167 | 8 | 38 | 292 | 31 | 284 | 2.66e-14 | 73.2 |
| MS.gene82921.t1 | MTR_1g030262 | 54.545 | 55 | 25 | 0 | 32 | 86 | 29 | 83 | 3.50e-14 | 67.8 |
| MS.gene82921.t1 | MTR_7g116500 | 25.246 | 305 | 190 | 10 | 13 | 299 | 9 | 293 | 6.01e-14 | 72.0 |
| MS.gene82921.t1 | MTR_1g060490 | 25.926 | 270 | 169 | 9 | 37 | 298 | 33 | 279 | 3.24e-13 | 69.7 |
| MS.gene82921.t1 | MTR_8g075230 | 25.000 | 316 | 199 | 12 | 1 | 299 | 1 | 295 | 4.52e-13 | 69.3 |
| MS.gene82921.t1 | MTR_8g074580 | 30.882 | 272 | 141 | 13 | 38 | 285 | 43 | 291 | 4.91e-13 | 69.7 |
| MS.gene82921.t1 | MTR_8g074570 | 26.523 | 279 | 171 | 11 | 38 | 299 | 37 | 298 | 6.40e-13 | 68.9 |
| MS.gene82921.t1 | MTR_1g092740 | 24.521 | 261 | 167 | 5 | 40 | 296 | 39 | 273 | 8.54e-13 | 68.6 |
| MS.gene82921.t1 | MTR_4g108690 | 24.549 | 277 | 169 | 8 | 43 | 299 | 31 | 287 | 1.19e-12 | 68.2 |
| MS.gene82921.t1 | MTR_1g079530 | 27.099 | 262 | 159 | 10 | 39 | 284 | 29 | 274 | 2.12e-12 | 67.4 |
| MS.gene82921.t1 | MTR_4g087985 | 26.144 | 306 | 177 | 12 | 11 | 292 | 16 | 296 | 3.06e-12 | 67.0 |
| MS.gene82921.t1 | MTR_8g074560 | 26.056 | 284 | 162 | 10 | 38 | 294 | 30 | 292 | 1.39e-11 | 65.1 |
| MS.gene82921.t1 | MTR_7g008060 | 26.103 | 272 | 166 | 11 | 39 | 299 | 33 | 280 | 1.44e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82921.t1 | AT3G27950 | 58.333 | 276 | 110 | 4 | 32 | 304 | 25 | 298 | 8.51e-110 | 324 |
| MS.gene82921.t1 | AT5G14450 | 49.000 | 300 | 134 | 4 | 11 | 299 | 17 | 308 | 1.60e-96 | 290 |
| MS.gene82921.t1 | AT1G67830 | 49.291 | 282 | 124 | 5 | 30 | 299 | 21 | 295 | 1.11e-86 | 265 |
| MS.gene82921.t1 | AT3G26430 | 46.309 | 298 | 142 | 6 | 13 | 299 | 6 | 296 | 3.51e-82 | 253 |
| MS.gene82921.t1 | AT1G54790 | 44.737 | 266 | 134 | 5 | 37 | 294 | 30 | 290 | 2.14e-65 | 211 |
| MS.gene82921.t1 | AT1G09390 | 42.123 | 292 | 155 | 8 | 13 | 299 | 12 | 294 | 1.76e-63 | 205 |
| MS.gene82921.t1 | AT1G54790 | 43.223 | 273 | 142 | 5 | 30 | 294 | 22 | 289 | 1.34e-62 | 203 |
| MS.gene82921.t1 | AT1G54790 | 41.611 | 298 | 153 | 6 | 30 | 311 | 22 | 314 | 1.96e-62 | 204 |
| MS.gene82921.t1 | AT3G05180 | 42.279 | 272 | 142 | 6 | 37 | 299 | 34 | 299 | 9.17e-60 | 196 |
| MS.gene82921.t1 | AT1G56670 | 39.310 | 290 | 165 | 6 | 14 | 299 | 15 | 297 | 1.29e-59 | 193 |
| MS.gene82921.t1 | AT4G01130 | 37.102 | 283 | 162 | 3 | 29 | 301 | 24 | 300 | 7.49e-59 | 192 |
| MS.gene82921.t1 | AT1G56670 | 39.175 | 291 | 166 | 6 | 13 | 299 | 14 | 297 | 3.36e-58 | 192 |
| MS.gene82921.t1 | AT4G01130 | 36.455 | 299 | 169 | 5 | 11 | 299 | 11 | 298 | 2.35e-57 | 190 |
| MS.gene82921.t1 | AT3G62280 | 39.552 | 268 | 145 | 5 | 38 | 299 | 35 | 291 | 4.74e-56 | 184 |
| MS.gene82921.t1 | AT3G62280 | 39.552 | 268 | 145 | 5 | 38 | 299 | 35 | 291 | 4.58e-55 | 183 |
| MS.gene82921.t1 | AT4G01130 | 32.569 | 218 | 131 | 3 | 92 | 299 | 1 | 212 | 1.12e-32 | 123 |
| MS.gene82921.t1 | AT5G45910 | 32.857 | 280 | 166 | 9 | 37 | 299 | 28 | 302 | 6.07e-30 | 117 |
| MS.gene82921.t1 | AT1G31550 | 30.573 | 314 | 175 | 11 | 6 | 296 | 7 | 300 | 8.23e-30 | 117 |
| MS.gene82921.t1 | AT1G31550 | 30.744 | 309 | 171 | 11 | 6 | 291 | 7 | 295 | 1.10e-29 | 117 |
| MS.gene82921.t1 | AT2G27360 | 30.255 | 314 | 181 | 11 | 6 | 299 | 7 | 302 | 4.70e-28 | 112 |
| MS.gene82921.t1 | AT1G28580 | 30.392 | 306 | 179 | 10 | 4 | 291 | 8 | 297 | 1.21e-27 | 111 |
| MS.gene82921.t1 | AT3G48460 | 29.352 | 293 | 158 | 8 | 40 | 305 | 39 | 309 | 1.18e-26 | 108 |
| MS.gene82921.t1 | AT1G28650 | 29.688 | 320 | 182 | 10 | 3 | 299 | 6 | 305 | 5.46e-26 | 106 |
| MS.gene82921.t1 | AT1G28600 | 28.205 | 312 | 181 | 11 | 13 | 302 | 11 | 301 | 9.14e-26 | 106 |
| MS.gene82921.t1 | AT1G28590 | 29.779 | 272 | 165 | 8 | 37 | 291 | 34 | 296 | 2.66e-25 | 105 |
| MS.gene82921.t1 | AT1G06990 | 27.707 | 314 | 194 | 10 | 3 | 299 | 1 | 298 | 6.23e-25 | 103 |
| MS.gene82921.t1 | AT1G28610 | 27.303 | 304 | 175 | 10 | 12 | 291 | 9 | 290 | 1.07e-24 | 103 |
| MS.gene82921.t1 | AT1G28640 | 28.671 | 286 | 165 | 8 | 30 | 291 | 25 | 295 | 1.91e-24 | 102 |
| MS.gene82921.t1 | AT3G50400 | 29.195 | 298 | 172 | 11 | 39 | 315 | 34 | 313 | 4.57e-24 | 101 |
| MS.gene82921.t1 | AT1G23500 | 31.136 | 273 | 169 | 7 | 39 | 303 | 35 | 296 | 1.15e-23 | 99.8 |
| MS.gene82921.t1 | AT2G23540 | 31.655 | 278 | 152 | 11 | 39 | 294 | 48 | 309 | 1.77e-23 | 99.8 |
| MS.gene82921.t1 | AT1G73610 | 29.338 | 317 | 184 | 12 | 5 | 303 | 1 | 295 | 3.24e-23 | 98.6 |
| MS.gene82921.t1 | AT1G29670 | 29.630 | 297 | 179 | 10 | 9 | 294 | 8 | 285 | 3.47e-23 | 98.6 |
| MS.gene82921.t1 | AT1G29670 | 29.630 | 297 | 179 | 10 | 9 | 294 | 76 | 353 | 5.59e-23 | 99.0 |
| MS.gene82921.t1 | AT1G28570 | 28.159 | 277 | 163 | 8 | 37 | 291 | 32 | 294 | 7.92e-23 | 97.8 |
| MS.gene82921.t1 | AT1G28670 | 28.621 | 290 | 177 | 9 | 30 | 299 | 25 | 304 | 1.05e-22 | 97.4 |
| MS.gene82921.t1 | AT2G19060 | 32.075 | 265 | 146 | 11 | 38 | 288 | 29 | 273 | 1.09e-22 | 97.1 |
| MS.gene82921.t1 | AT5G63170 | 30.000 | 280 | 157 | 11 | 38 | 299 | 27 | 285 | 2.31e-22 | 95.9 |
| MS.gene82921.t1 | AT1G28660 | 29.123 | 285 | 165 | 8 | 30 | 291 | 25 | 295 | 3.64e-22 | 95.9 |
| MS.gene82921.t1 | AT5G40990 | 29.348 | 276 | 163 | 8 | 39 | 299 | 37 | 295 | 9.51e-22 | 94.7 |
| MS.gene82921.t1 | AT5G08460 | 28.421 | 285 | 178 | 8 | 30 | 299 | 40 | 313 | 4.37e-21 | 93.2 |
| MS.gene82921.t1 | AT1G71691 | 25.623 | 281 | 181 | 6 | 31 | 299 | 47 | 311 | 4.50e-21 | 92.0 |
| MS.gene82921.t1 | AT1G28660 | 29.123 | 285 | 164 | 9 | 30 | 291 | 25 | 294 | 8.17e-21 | 92.0 |
| MS.gene82921.t1 | AT1G29660 | 27.899 | 276 | 170 | 8 | 38 | 299 | 31 | 291 | 9.42e-21 | 91.7 |
| MS.gene82921.t1 | AT1G71691 | 25.623 | 281 | 181 | 6 | 31 | 299 | 47 | 311 | 9.81e-21 | 92.0 |
| MS.gene82921.t1 | AT4G18970 | 27.007 | 274 | 180 | 6 | 36 | 299 | 25 | 288 | 1.33e-20 | 91.3 |
| MS.gene82921.t1 | AT4G18970 | 27.007 | 274 | 180 | 6 | 36 | 299 | 25 | 288 | 1.74e-20 | 91.7 |
| MS.gene82921.t1 | AT2G19050 | 29.502 | 261 | 156 | 9 | 38 | 288 | 30 | 272 | 2.31e-20 | 89.4 |
| MS.gene82921.t1 | AT5G15720 | 28.136 | 295 | 174 | 10 | 27 | 301 | 18 | 294 | 2.90e-20 | 89.7 |
| MS.gene82921.t1 | AT2G03980 | 29.231 | 260 | 156 | 9 | 37 | 285 | 41 | 283 | 3.59e-20 | 90.1 |
| MS.gene82921.t1 | AT2G03980 | 29.231 | 260 | 156 | 9 | 37 | 285 | 41 | 283 | 3.59e-20 | 90.1 |
| MS.gene82921.t1 | AT2G03980 | 29.231 | 260 | 156 | 9 | 37 | 285 | 41 | 283 | 3.59e-20 | 90.1 |
| MS.gene82921.t1 | AT2G03980 | 29.231 | 260 | 156 | 9 | 37 | 285 | 41 | 283 | 3.59e-20 | 90.1 |
| MS.gene82921.t1 | AT2G19050 | 29.502 | 261 | 156 | 9 | 38 | 288 | 30 | 272 | 4.35e-20 | 89.7 |
| MS.gene82921.t1 | AT5G15720 | 28.328 | 293 | 172 | 10 | 27 | 299 | 18 | 292 | 9.25e-20 | 89.0 |
| MS.gene82921.t1 | AT5G03820 | 26.959 | 319 | 185 | 11 | 1 | 299 | 4 | 294 | 9.83e-20 | 89.0 |
| MS.gene82921.t1 | AT5G37690 | 28.929 | 280 | 156 | 10 | 41 | 299 | 29 | 286 | 1.10e-19 | 88.6 |
| MS.gene82921.t1 | AT1G53920 | 27.863 | 262 | 158 | 8 | 39 | 287 | 48 | 291 | 1.60e-19 | 88.6 |
| MS.gene82921.t1 | AT5G03820 | 26.959 | 319 | 185 | 11 | 1 | 299 | 32 | 322 | 1.63e-19 | 88.6 |
| MS.gene82921.t1 | AT1G54030 | 27.027 | 259 | 148 | 10 | 40 | 287 | 53 | 281 | 2.09e-19 | 87.4 |
| MS.gene82921.t1 | AT1G33811 | 28.102 | 274 | 178 | 9 | 38 | 299 | 33 | 299 | 2.25e-19 | 87.8 |
| MS.gene82921.t1 | AT1G75880 | 26.984 | 315 | 184 | 12 | 7 | 299 | 22 | 312 | 2.28e-19 | 88.2 |
| MS.gene82921.t1 | AT5G45670 | 27.152 | 302 | 192 | 8 | 8 | 299 | 6 | 289 | 2.47e-19 | 87.8 |
| MS.gene82921.t1 | AT1G75900 | 29.167 | 288 | 158 | 11 | 34 | 299 | 38 | 301 | 3.64e-19 | 87.4 |
| MS.gene82921.t1 | AT1G54030 | 27.027 | 259 | 148 | 9 | 40 | 287 | 53 | 281 | 5.87e-19 | 87.0 |
| MS.gene82921.t1 | AT4G10950 | 26.071 | 280 | 171 | 9 | 38 | 299 | 70 | 331 | 1.00e-18 | 86.3 |
| MS.gene82921.t1 | AT1G75880 | 27.389 | 314 | 183 | 13 | 7 | 299 | 22 | 311 | 1.39e-18 | 85.9 |
| MS.gene82921.t1 | AT1G53940 | 29.496 | 278 | 162 | 9 | 39 | 300 | 39 | 298 | 1.65e-18 | 84.7 |
| MS.gene82921.t1 | AT3G14225 | 28.159 | 277 | 165 | 7 | 39 | 299 | 37 | 295 | 2.23e-18 | 85.1 |
| MS.gene82921.t1 | AT1G53940 | 29.603 | 277 | 161 | 9 | 39 | 299 | 39 | 297 | 4.48e-18 | 84.3 |
| MS.gene82921.t1 | AT2G30220 | 27.010 | 311 | 181 | 12 | 11 | 299 | 9 | 295 | 5.19e-18 | 84.0 |
| MS.gene82921.t1 | AT5G42170 | 27.338 | 278 | 166 | 9 | 38 | 299 | 49 | 306 | 5.62e-18 | 84.0 |
| MS.gene82921.t1 | AT1G20132 | 27.972 | 286 | 169 | 10 | 38 | 305 | 60 | 326 | 5.81e-18 | 84.0 |
| MS.gene82921.t1 | AT2G40250 | 28.723 | 282 | 175 | 12 | 39 | 305 | 36 | 306 | 6.71e-18 | 83.6 |
| MS.gene82921.t1 | AT1G54020 | 27.451 | 255 | 151 | 9 | 39 | 285 | 33 | 261 | 7.23e-18 | 83.6 |
| MS.gene82921.t1 | AT3G14225 | 28.674 | 279 | 165 | 8 | 39 | 299 | 37 | 299 | 1.09e-17 | 83.2 |
| MS.gene82921.t1 | AT1G75910 | 28.058 | 278 | 172 | 8 | 37 | 299 | 26 | 290 | 1.94e-17 | 82.0 |
| MS.gene82921.t1 | AT3G43550 | 24.351 | 308 | 196 | 11 | 5 | 299 | 3 | 286 | 3.91e-17 | 80.5 |
| MS.gene82921.t1 | AT2G31540 | 25.329 | 304 | 197 | 10 | 11 | 299 | 9 | 297 | 4.01e-17 | 81.3 |
| MS.gene82921.t1 | AT1G75920 | 25.784 | 287 | 166 | 10 | 37 | 299 | 27 | 290 | 4.98e-17 | 80.9 |
| MS.gene82921.t1 | AT1G71120 | 26.766 | 269 | 159 | 7 | 33 | 285 | 25 | 271 | 6.69e-17 | 80.9 |
| MS.gene82921.t1 | AT1G59406 | 24.483 | 290 | 199 | 8 | 18 | 299 | 9 | 286 | 1.15e-16 | 80.1 |
| MS.gene82921.t1 | AT1G59030 | 24.483 | 290 | 199 | 8 | 18 | 299 | 9 | 286 | 1.15e-16 | 80.1 |
| MS.gene82921.t1 | AT1G58725 | 24.483 | 290 | 199 | 8 | 18 | 299 | 9 | 286 | 1.15e-16 | 80.1 |
| MS.gene82921.t1 | AT2G42990 | 26.740 | 273 | 177 | 8 | 38 | 299 | 27 | 287 | 1.40e-16 | 79.7 |
| MS.gene82921.t1 | AT1G54000 | 26.923 | 260 | 155 | 9 | 39 | 287 | 36 | 271 | 1.79e-16 | 79.7 |
| MS.gene82921.t1 | AT2G04020 | 30.392 | 204 | 126 | 5 | 37 | 233 | 41 | 235 | 2.38e-16 | 77.8 |
| MS.gene82921.t1 | AT4G26790 | 26.667 | 285 | 176 | 9 | 37 | 307 | 27 | 292 | 2.42e-16 | 79.0 |
| MS.gene82921.t1 | AT4G26790 | 26.667 | 285 | 176 | 9 | 37 | 307 | 27 | 292 | 2.42e-16 | 79.0 |
| MS.gene82921.t1 | AT4G10950 | 26.071 | 280 | 167 | 10 | 38 | 299 | 70 | 327 | 3.20e-16 | 79.0 |
| MS.gene82921.t1 | AT2G19010 | 28.881 | 277 | 158 | 10 | 38 | 304 | 29 | 276 | 3.21e-16 | 78.6 |
| MS.gene82921.t1 | AT2G19010 | 28.881 | 277 | 158 | 10 | 38 | 304 | 59 | 306 | 3.22e-16 | 79.0 |
| MS.gene82921.t1 | AT1G58520 | 25.088 | 283 | 192 | 8 | 25 | 299 | 16 | 286 | 3.31e-16 | 78.6 |
| MS.gene82921.t1 | AT1G58525 | 25.088 | 283 | 192 | 8 | 25 | 299 | 16 | 286 | 3.31e-16 | 78.6 |
| MS.gene82921.t1 | AT4G16230 | 31.092 | 238 | 127 | 12 | 38 | 256 | 29 | 248 | 3.36e-16 | 77.4 |
| MS.gene82921.t1 | AT2G30310 | 25.890 | 309 | 188 | 11 | 11 | 299 | 9 | 296 | 3.51e-16 | 78.6 |
| MS.gene82921.t1 | AT2G04020 | 30.392 | 204 | 126 | 5 | 37 | 233 | 41 | 235 | 5.04e-16 | 77.8 |
| MS.gene82921.t1 | AT3G16370 | 28.938 | 273 | 171 | 8 | 38 | 299 | 29 | 289 | 6.31e-16 | 77.8 |
| MS.gene82921.t1 | AT1G75890 | 27.208 | 283 | 164 | 12 | 38 | 299 | 46 | 307 | 6.82e-16 | 77.8 |
| MS.gene82921.t1 | AT1G75930 | 26.299 | 308 | 191 | 10 | 5 | 299 | 6 | 290 | 6.95e-16 | 77.8 |
| MS.gene82921.t1 | AT1G75890 | 27.208 | 283 | 164 | 12 | 38 | 299 | 75 | 336 | 7.79e-16 | 77.8 |
| MS.gene82921.t1 | AT5G03810 | 26.899 | 316 | 188 | 13 | 1 | 299 | 1 | 290 | 1.31e-15 | 77.0 |
| MS.gene82921.t1 | AT5G37690 | 28.114 | 281 | 149 | 11 | 41 | 299 | 29 | 278 | 2.98e-15 | 75.9 |
| MS.gene82921.t1 | AT2G04570 | 27.473 | 273 | 175 | 8 | 38 | 299 | 27 | 287 | 3.29e-15 | 75.9 |
| MS.gene82921.t1 | AT1G20135 | 28.723 | 282 | 161 | 10 | 37 | 299 | 27 | 287 | 3.64e-15 | 75.5 |
| MS.gene82921.t1 | AT1G28580 | 27.149 | 221 | 141 | 7 | 82 | 291 | 5 | 216 | 4.61e-15 | 74.7 |
| MS.gene82921.t1 | AT1G74460 | 24.910 | 277 | 168 | 9 | 43 | 299 | 27 | 283 | 6.41e-15 | 75.1 |
| MS.gene82921.t1 | AT1G75890 | 26.460 | 291 | 169 | 12 | 38 | 299 | 46 | 320 | 7.06e-15 | 75.1 |
| MS.gene82921.t1 | AT1G20130 | 24.908 | 273 | 189 | 6 | 38 | 299 | 203 | 470 | 1.19e-14 | 74.7 |
| MS.gene82921.t1 | AT1G53990 | 24.522 | 314 | 193 | 10 | 1 | 299 | 2 | 286 | 1.26e-14 | 74.3 |
| MS.gene82921.t1 | AT1G28610 | 27.650 | 217 | 118 | 7 | 12 | 210 | 9 | 204 | 2.66e-14 | 72.0 |
| MS.gene82921.t1 | AT1G20130 | 24.908 | 273 | 189 | 6 | 38 | 299 | 183 | 450 | 2.78e-14 | 73.6 |
| MS.gene82921.t1 | AT1G28600 | 37.391 | 115 | 57 | 3 | 37 | 136 | 29 | 143 | 2.89e-14 | 71.2 |
| MS.gene82921.t1 | AT5G03610 | 22.476 | 307 | 205 | 9 | 1 | 297 | 1 | 284 | 3.22e-14 | 72.8 |
| MS.gene82921.t1 | AT1G71250 | 25.979 | 281 | 170 | 9 | 38 | 299 | 40 | 301 | 4.28e-14 | 72.8 |
| MS.gene82921.t1 | AT1G58430 | 25.890 | 309 | 189 | 12 | 11 | 299 | 9 | 297 | 6.02e-14 | 72.0 |
| MS.gene82921.t1 | AT5G45960 | 24.390 | 287 | 179 | 10 | 39 | 304 | 47 | 316 | 6.54e-14 | 72.0 |
| MS.gene82921.t1 | AT1G71691 | 23.894 | 226 | 147 | 5 | 83 | 299 | 1 | 210 | 6.83e-14 | 71.2 |
| MS.gene82921.t1 | AT1G75920 | 24.503 | 302 | 166 | 10 | 37 | 299 | 22 | 300 | 8.58e-14 | 71.6 |
| MS.gene82921.t1 | AT5G33370 | 26.736 | 288 | 173 | 10 | 39 | 307 | 30 | 298 | 1.01e-13 | 71.2 |
| MS.gene82921.t1 | AT1G54010 | 25.000 | 260 | 160 | 8 | 39 | 287 | 36 | 271 | 1.27e-13 | 71.2 |
| MS.gene82921.t1 | AT2G24560 | 24.183 | 306 | 197 | 12 | 11 | 299 | 9 | 296 | 1.93e-13 | 70.1 |
| MS.gene82921.t1 | AT4G30140 | 28.137 | 263 | 160 | 9 | 38 | 290 | 32 | 275 | 1.99e-13 | 70.5 |
| MS.gene82921.t1 | AT2G24560 | 23.765 | 324 | 209 | 13 | 11 | 314 | 9 | 314 | 2.70e-13 | 70.1 |
| MS.gene82921.t1 | AT5G33370 | 26.429 | 280 | 168 | 10 | 39 | 299 | 30 | 290 | 4.57e-13 | 69.7 |
| MS.gene82921.t1 | AT5G03980 | 28.800 | 125 | 84 | 2 | 177 | 296 | 127 | 251 | 1.70e-12 | 67.4 |
| MS.gene82921.t1 | AT3G04290 | 26.545 | 275 | 174 | 10 | 39 | 299 | 29 | 289 | 6.00e-12 | 66.2 |
| MS.gene82921.t1 | AT3G14220 | 23.622 | 254 | 159 | 8 | 38 | 281 | 31 | 259 | 2.15e-11 | 64.3 |
| MS.gene82921.t1 | AT3G14210 | 25.461 | 271 | 165 | 8 | 39 | 297 | 36 | 281 | 2.88e-11 | 64.3 |
| MS.gene82921.t1 | AT1G54020 | 27.807 | 187 | 106 | 7 | 103 | 285 | 14 | 175 | 3.99e-11 | 63.2 |
| MS.gene82921.t1 | AT1G54020 | 27.807 | 187 | 106 | 7 | 103 | 285 | 14 | 175 | 3.99e-11 | 63.2 |
| MS.gene82921.t1 | AT1G54020 | 27.807 | 187 | 106 | 7 | 103 | 285 | 14 | 175 | 3.99e-11 | 63.2 |
| MS.gene82921.t1 | AT5G18430 | 25.540 | 278 | 175 | 10 | 39 | 299 | 28 | 290 | 4.24e-11 | 63.5 |
| MS.gene82921.t1 | AT3G43570 | 23.887 | 247 | 163 | 7 | 5 | 243 | 3 | 232 | 8.81e-11 | 62.4 |
Find 61 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATTGGCTCAAGATTTC+AGG | 0.171167 | 6.1:-2617538 | None:intergenic |
| CCTTCACTGCTTCTGAAAAT+TGG | 0.193222 | 6.1:-2617552 | None:intergenic |
| CCTAATGGAATAAGCTTCTT+TGG | 0.214457 | 6.1:+2616680 | MS.gene82921:CDS |
| CATATCAACATATGTAAATT+TGG | 0.224374 | 6.1:-2618138 | None:intergenic |
| ATTGCTGATTAGTTCATATT+TGG | 0.234983 | 6.1:-2618168 | None:intergenic |
| GCCCTTTACACAATTGATAT+TGG | 0.242049 | 6.1:+2617454 | MS.gene82921:CDS |
| GGCTAATAATTCATGTATTA+TGG | 0.287012 | 6.1:+2616498 | MS.gene82921:CDS |
| ACAGTATATGCAACATTTAC+AGG | 0.299148 | 6.1:+2616647 | MS.gene82921:CDS |
| CCAAAGAAGCTTATTCCATT+AGG | 0.301869 | 6.1:-2616680 | None:intergenic |
| AGCTTCTTTGGAAACATATC+AGG | 0.328057 | 6.1:+2616692 | MS.gene82921:CDS |
| TCCAATATCAATTGTGTAAA+GGG | 0.330867 | 6.1:-2617455 | None:intergenic |
| ACTCAGTTGGATCAAATTAC+AGG | 0.349530 | 6.1:+2616960 | MS.gene82921:CDS |
| TTAGAGAAGTCTTCAGGCCT+TGG | 0.362608 | 6.1:-2617430 | None:intergenic |
| ATGAAGGTGCAAGAGTGTTC+TGG | 0.362900 | 6.1:+2617952 | MS.gene82921:CDS |
| ACAGGTGTTCAACCTCCTAA+TGG | 0.371094 | 6.1:+2616665 | MS.gene82921:CDS |
| CAACTTTGGTGACTCAAATT+CGG | 0.385055 | 6.1:+2616616 | MS.gene82921:CDS |
| TTCAAATATGCACTGAGATA+TGG | 0.395894 | 6.1:-2616938 | None:intergenic |
| AAGGTGATCTTCAAGTCTTT+AGG | 0.402092 | 6.1:+2618201 | MS.gene82921:CDS |
| TCACCAAAGTTGTAAATTGC+AGG | 0.407889 | 6.1:-2616605 | None:intergenic |
| TACTTATAAAATCAATTATG+AGG | 0.428815 | 6.1:-2616733 | None:intergenic |
| AAGGCCTGAAGACTTCTCTA+AGG | 0.443531 | 6.1:+2617432 | MS.gene82921:CDS |
| GGACAGAATGATCTTGCCTA+TGG | 0.444158 | 6.1:+2617475 | MS.gene82921:CDS |
| GAGTTGATTGAAGAGAATAT+TGG | 0.444721 | 6.1:-2617089 | None:intergenic |
| AAATGTTGCATATACTGTTC+CGG | 0.447616 | 6.1:-2616642 | None:intergenic |
| AGGGCCTTAGAGAAGTCTTC+AGG | 0.457760 | 6.1:-2617436 | None:intergenic |
| GGTGCTAACTTTGCAGTTGG+AGG | 0.460979 | 6.1:+2616986 | MS.gene82921:CDS |
| GTCCAATATCAATTGTGTAA+AGG | 0.462476 | 6.1:-2617456 | None:intergenic |
| ATTCACAACACAGGTCCAAT+TGG | 0.462555 | 6.1:+2617975 | MS.gene82921:CDS |
| TTGAAGGGCAAGCATCCAAT+TGG | 0.465435 | 6.1:-2617990 | None:intergenic |
| TGAAAGTACATGTCACAAAC+AGG | 0.465777 | 6.1:-2616529 | None:intergenic |
| TATCCTGCAATTTACAACTT+TGG | 0.470970 | 6.1:+2616602 | MS.gene82921:CDS |
| AGTGCATATTTGAACTCAGT+TGG | 0.477818 | 6.1:+2616947 | MS.gene82921:CDS |
| CTCATAAGAGCAGTAATTGA+AGG | 0.490110 | 6.1:-2618006 | None:intergenic |
| ACTTGAAGTCCAAGATGGAT+TGG | 0.493504 | 6.1:-2617037 | None:intergenic |
| GGAATTTAACAAGAAGCTAA+AGG | 0.504493 | 6.1:+2618079 | MS.gene82921:CDS |
| CATGGTGCTAACTTTGCAGT+TGG | 0.505032 | 6.1:+2616983 | MS.gene82921:CDS |
| ACCTCAGAACAAAATAGCTC+AGG | 0.506068 | 6.1:+2618058 | MS.gene82921:CDS |
| GGTGACTCAAATTCGGATAC+CGG | 0.510671 | 6.1:+2616623 | MS.gene82921:CDS |
| GGTTATAGTCCAATCCATCT+TGG | 0.514229 | 6.1:+2617028 | MS.gene82921:CDS |
| AGGACAAAGTATCTCAACTA+AGG | 0.516613 | 6.1:+2618099 | MS.gene82921:CDS |
| AAGAAGCTTATTCCATTAGG+AGG | 0.524722 | 6.1:-2616677 | None:intergenic |
| GAGAACAAGAAGGATGCTAA+TGG | 0.526011 | 6.1:+2618026 | MS.gene82921:CDS |
| GAGATACTTGAAGTCCAAGA+TGG | 0.568431 | 6.1:-2617042 | None:intergenic |
| CTCTCAAAAGTGATCTTCCA+AGG | 0.573322 | 6.1:+2617413 | MS.gene82921:CDS |
| ATCAGCAATGCAAGGAGCCA+AGG | 0.578301 | 6.1:+2618182 | MS.gene82921:CDS |
| ACTAAGGAGAAAACTTCCAC+TGG | 0.601490 | 6.1:+2618115 | MS.gene82921:CDS |
| TAAAGACTTGAAGATCACCT+TGG | 0.603384 | 6.1:-2618199 | None:intergenic |
| TCATAAGAGCAGTAATTGAA+GGG | 0.606596 | 6.1:-2618005 | None:intergenic |
| ATGGATTGGACTATAACCAC+CGG | 0.607877 | 6.1:-2617023 | None:intergenic |
| AGAAGTGTGTTGAAAACCAT+AGG | 0.610702 | 6.1:-2617491 | None:intergenic |
| GTTGGATCAAATTACAGGCA+TGG | 0.611082 | 6.1:+2616965 | MS.gene82921:CDS |
| ATGAACTAATCAGCAATGCA+AGG | 0.614774 | 6.1:+2618174 | MS.gene82921:CDS |
| CTTCTGAGGAACAAGTTCAA+AGG | 0.616992 | 6.1:+2617509 | MS.gene82921:CDS |
| GGAGGTGCATCGATTCGTCC+CGG | 0.617499 | 6.1:+2617004 | MS.gene82921:CDS |
| TTATAAAATCAATTATGAGG+CGG | 0.618402 | 6.1:-2616730 | None:intergenic |
| CTGCTCTTATGAGAACAAGA+AGG | 0.621625 | 6.1:+2618016 | MS.gene82921:CDS |
| ACATATGTAAATTTGGCCAG+TGG | 0.630694 | 6.1:-2618131 | None:intergenic |
| ATATCAGGAAGAGCTTCTGA+TGG | 0.645032 | 6.1:+2616707 | MS.gene82921:CDS |
| TGGATTGGACTATAACCACC+GGG | 0.678464 | 6.1:-2617022 | None:intergenic |
| GTGTTCTGGATTCACAACAC+AGG | 0.684053 | 6.1:+2617966 | MS.gene82921:CDS |
| GGTGCATCGATTCGTCCCGG+TGG | 0.693398 | 6.1:+2617007 | MS.gene82921:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATGTAAACAAGTATT+TGG | - | chr6.1:2617591-2617610 | None:intergenic | 15.0% |
| !! | TACTTATAAAATCAATTATG+AGG | - | chr6.1:2616736-2616755 | None:intergenic | 15.0% |
| !! | TATCGTATTTATAAAGTTTA+GGG | + | chr6.1:2617822-2617841 | MS.gene82921:intron | 15.0% |
| !! | TTATCGTATTTATAAAGTTT+AGG | + | chr6.1:2617821-2617840 | MS.gene82921:intron | 15.0% |
| !!! | CATTAAATTTTTATAGTACA+TGG | - | chr6.1:2617682-2617701 | None:intergenic | 15.0% |
| !! | CATATCAACATATGTAAATT+TGG | - | chr6.1:2618141-2618160 | None:intergenic | 20.0% |
| !! | CTATGTTAATAAACATAACA+AGG | - | chr6.1:2617203-2617222 | None:intergenic | 20.0% |
| !! | GATAGATTAAGAATAATTGA+GGG | - | chr6.1:2617711-2617730 | None:intergenic | 20.0% |
| !! | TGATAGATTAAGAATAATTG+AGG | - | chr6.1:2617712-2617731 | None:intergenic | 20.0% |
| !! | TTATAAAATCAATTATGAGG+CGG | - | chr6.1:2616733-2616752 | None:intergenic | 20.0% |
| ! | AGTAAGAAAATGCAAAGATA+AGG | - | chr6.1:2617136-2617155 | None:intergenic | 25.0% |
| ! | CTTAACCAAGTTTAAATATG+TGG | - | chr6.1:2617230-2617249 | None:intergenic | 25.0% |
| ! | GGCTAATAATTCATGTATTA+TGG | + | chr6.1:2616498-2616517 | MS.gene82921:CDS | 25.0% |
| ! | GTTAACCACATATTTAAACT+TGG | + | chr6.1:2617222-2617241 | MS.gene82921:intron | 25.0% |
| ! | TAAAGTATGATAAATGAGAG+TGG | - | chr6.1:2617752-2617771 | None:intergenic | 25.0% |
| ! | TAATGTAAACAAGTATTTGG+TGG | - | chr6.1:2617588-2617607 | None:intergenic | 25.0% |
| ! | TCCAATATCAATTGTGTAAA+GGG | - | chr6.1:2617458-2617477 | None:intergenic | 25.0% |
| ! | TGTTTCACAATTGTTATATG+TGG | - | chr6.1:2616808-2616827 | None:intergenic | 25.0% |
| ! | TTATGAGTAAATCATGAACT+TGG | + | chr6.1:2617624-2617643 | MS.gene82921:intron | 25.0% |
| !! | ATTGCTGATTAGTTCATATT+TGG | - | chr6.1:2618171-2618190 | None:intergenic | 25.0% |
| !! | TTTTAGCAACTATACAATGA+AGG | + | chr6.1:2617936-2617955 | MS.gene82921:intron | 25.0% |
| AAATGTTGCATATACTGTTC+CGG | - | chr6.1:2616645-2616664 | None:intergenic | 30.0% | |
| ACACACAAAATTGAACAAAG+AGG | - | chr6.1:2616883-2616902 | None:intergenic | 30.0% | |
| ACAGTATATGCAACATTTAC+AGG | + | chr6.1:2616647-2616666 | MS.gene82921:CDS | 30.0% | |
| ATAAAGTTTAGGGACCAAAT+AGG | + | chr6.1:2617832-2617851 | MS.gene82921:intron | 30.0% | |
| CAGCTATGATATAAACAGAA+GGG | - | chr6.1:2617335-2617354 | None:intergenic | 30.0% | |
| CTATTATGCCTTTCAACAAA+TGG | + | chr6.1:2617161-2617180 | MS.gene82921:intron | 30.0% | |
| GGAATTTAACAAGAAGCTAA+AGG | + | chr6.1:2618079-2618098 | MS.gene82921:CDS | 30.0% | |
| GTATTACACTATCTGCTATT+TGG | + | chr6.1:2617655-2617674 | MS.gene82921:intron | 30.0% | |
| GTCCAATATCAATTGTGTAA+AGG | - | chr6.1:2617459-2617478 | None:intergenic | 30.0% | |
| TATCCTGCAATTTACAACTT+TGG | + | chr6.1:2616602-2616621 | MS.gene82921:CDS | 30.0% | |
| TCAGCTATGATATAAACAGA+AGG | - | chr6.1:2617336-2617355 | None:intergenic | 30.0% | |
| TCATAAGAGCAGTAATTGAA+GGG | - | chr6.1:2618008-2618027 | None:intergenic | 30.0% | |
| TTCAAATATGCACTGAGATA+TGG | - | chr6.1:2616941-2616960 | None:intergenic | 30.0% | |
| TTCTGATAAATGGTTATCCA+GGG | + | chr6.1:2617380-2617399 | MS.gene82921:intron | 30.0% | |
| TTTCTGATAAATGGTTATCC+AGG | + | chr6.1:2617379-2617398 | MS.gene82921:intron | 30.0% | |
| ! | AACAAATGGCTAATGAGTTT+TGG | + | chr6.1:2617175-2617194 | MS.gene82921:intron | 30.0% |
| ! | GAGTTGATTGAAGAGAATAT+TGG | - | chr6.1:2617092-2617111 | None:intergenic | 30.0% |
| ! | TGATGGTGATTTCTGATAAA+TGG | + | chr6.1:2617370-2617389 | MS.gene82921:intron | 30.0% |
| ! | TTCAATTTTGTGTGTTTGTG+TGG | + | chr6.1:2616888-2616907 | MS.gene82921:intron | 30.0% |
| !! | ATCATACTTTAGAGTCATTC+AGG | + | chr6.1:2617761-2617780 | MS.gene82921:intron | 30.0% |
| !! | TCATACTTTAGAGTCATTCA+GGG | + | chr6.1:2617762-2617781 | MS.gene82921:intron | 30.0% |
| AAATGAGAGTGGTAGTTCAA+AGG | - | chr6.1:2617741-2617760 | None:intergenic | 35.0% | |
| AAGAAGCTTATTCCATTAGG+AGG | - | chr6.1:2616680-2616699 | None:intergenic | 35.0% | |
| AAGGTGATCTTCAAGTCTTT+AGG | + | chr6.1:2618201-2618220 | MS.gene82921:CDS | 35.0% | |
| ACATATGTAAATTTGGCCAG+TGG | - | chr6.1:2618134-2618153 | None:intergenic | 35.0% | |
| ACTAAAACACTTGTCATGCA+TGG | + | chr6.1:2617908-2617927 | MS.gene82921:intron | 35.0% | |
| ACTCAGTTGGATCAAATTAC+AGG | + | chr6.1:2616960-2616979 | MS.gene82921:CDS | 35.0% | |
| AGTGCATATTTGAACTCAGT+TGG | + | chr6.1:2616947-2616966 | MS.gene82921:CDS | 35.0% | |
| ATGAACTAATCAGCAATGCA+AGG | + | chr6.1:2618174-2618193 | MS.gene82921:CDS | 35.0% | |
| CCAAAGAAGCTTATTCCATT+AGG | - | chr6.1:2616683-2616702 | None:intergenic | 35.0% | |
| CCTAATGGAATAAGCTTCTT+TGG | + | chr6.1:2616680-2616699 | MS.gene82921:CDS | 35.0% | |
| CTCATAAGAGCAGTAATTGA+AGG | - | chr6.1:2618009-2618028 | None:intergenic | 35.0% | |
| GCCCTTTACACAATTGATAT+TGG | + | chr6.1:2617454-2617473 | MS.gene82921:CDS | 35.0% | |
| TAAAGACTTGAAGATCACCT+TGG | - | chr6.1:2618202-2618221 | None:intergenic | 35.0% | |
| TCACCAAAGTTGTAAATTGC+AGG | - | chr6.1:2616608-2616627 | None:intergenic | 35.0% | |
| TCATTCAGGGATTCATTTGA+CGG | + | chr6.1:2617775-2617794 | MS.gene82921:intron | 35.0% | |
| TGAGACATGAAAAAGAGTGA+TGG | + | chr6.1:2617353-2617372 | MS.gene82921:intron | 35.0% | |
| ! | AGAAGTGTGTTGAAAACCAT+AGG | - | chr6.1:2617494-2617513 | None:intergenic | 35.0% |
| ! | AGCTTCTTTGGAAACATATC+AGG | + | chr6.1:2616692-2616711 | MS.gene82921:CDS | 35.0% |
| ! | AGGACAAAGTATCTCAACTA+AGG | + | chr6.1:2618099-2618118 | MS.gene82921:CDS | 35.0% |
| ! | CAACTTTGGTGACTCAAATT+CGG | + | chr6.1:2616616-2616635 | MS.gene82921:CDS | 35.0% |
| ! | CTCATTAGCCATTTGTTGAA+AGG | - | chr6.1:2617172-2617191 | None:intergenic | 35.0% |
| ! | GAAAATTGGCTCAAGATTTC+AGG | - | chr6.1:2617541-2617560 | None:intergenic | 35.0% |
| ! | TGAAAGTACATGTCACAAAC+AGG | - | chr6.1:2616532-2616551 | None:intergenic | 35.0% |
| ACCTCAGAACAAAATAGCTC+AGG | + | chr6.1:2618058-2618077 | MS.gene82921:CDS | 40.0% | |
| ACTAAGGAGAAAACTTCCAC+TGG | + | chr6.1:2618115-2618134 | MS.gene82921:CDS | 40.0% | |
| ACTTGAAGTCCAAGATGGAT+TGG | - | chr6.1:2617040-2617059 | None:intergenic | 40.0% | |
| AGGAGATCGAGTGATAGTTT+AGG | + | chr6.1:2617852-2617871 | MS.gene82921:intron | 40.0% | |
| ATATCAGGAAGAGCTTCTGA+TGG | + | chr6.1:2616707-2616726 | MS.gene82921:CDS | 40.0% | |
| ATTCACAACACAGGTCCAAT+TGG | + | chr6.1:2617975-2617994 | MS.gene82921:CDS | 40.0% | |
| CTATCACTCGATCTCCTATT+TGG | - | chr6.1:2617849-2617868 | None:intergenic | 40.0% | |
| CTCTCAAAAGTGATCTTCCA+AGG | + | chr6.1:2617413-2617432 | MS.gene82921:CDS | 40.0% | |
| CTGCTCTTATGAGAACAAGA+AGG | + | chr6.1:2618016-2618035 | MS.gene82921:CDS | 40.0% | |
| GAGAACAAGAAGGATGCTAA+TGG | + | chr6.1:2618026-2618045 | MS.gene82921:CDS | 40.0% | |
| GAGATACTTGAAGTCCAAGA+TGG | - | chr6.1:2617045-2617064 | None:intergenic | 40.0% | |
| GGAGATCGAGTGATAGTTTA+GGG | + | chr6.1:2617853-2617872 | MS.gene82921:intron | 40.0% | |
| GGTTATAGTCCAATCCATCT+TGG | + | chr6.1:2617028-2617047 | MS.gene82921:CDS | 40.0% | |
| GTTGGATCAAATTACAGGCA+TGG | + | chr6.1:2616965-2616984 | MS.gene82921:CDS | 40.0% | |
| TCAGAAGCAGTGAAGGTAAT+TGG | + | chr6.1:2617559-2617578 | MS.gene82921:intron | 40.0% | |
| ! | CCAATTTTCAGAAGCAGTGA+AGG | + | chr6.1:2617552-2617571 | MS.gene82921:CDS | 40.0% |
| ! | CCTTCACTGCTTCTGAAAAT+TGG | - | chr6.1:2617555-2617574 | None:intergenic | 40.0% |
| ! | CTTCTGAGGAACAAGTTCAA+AGG | + | chr6.1:2617509-2617528 | MS.gene82921:CDS | 40.0% |
| ! | TGGTTTTCAACACACTTCTG+AGG | + | chr6.1:2617495-2617514 | MS.gene82921:CDS | 40.0% |
| !! | ATGGATTGGACTATAACCAC+CGG | - | chr6.1:2617026-2617045 | None:intergenic | 40.0% |
| !! | CTTGGAAGATCACTTTTGAG+AGG | - | chr6.1:2617415-2617434 | None:intergenic | 40.0% |
| !! | TCCTGAGCTATTTTGTTCTG+AGG | - | chr6.1:2618062-2618081 | None:intergenic | 40.0% |
| AAGGCCTGAAGACTTCTCTA+AGG | + | chr6.1:2617432-2617451 | MS.gene82921:CDS | 45.0% | |
| ACAGGTGTTCAACCTCCTAA+TGG | + | chr6.1:2616665-2616684 | MS.gene82921:CDS | 45.0% | |
| GGACAGAATGATCTTGCCTA+TGG | + | chr6.1:2617475-2617494 | MS.gene82921:CDS | 45.0% | |
| GGTGACTCAAATTCGGATAC+CGG | + | chr6.1:2616623-2616642 | MS.gene82921:CDS | 45.0% | |
| TTAGAGAAGTCTTCAGGCCT+TGG | - | chr6.1:2617433-2617452 | None:intergenic | 45.0% | |
| TTGAAGGGCAAGCATCCAAT+TGG | - | chr6.1:2617993-2618012 | None:intergenic | 45.0% | |
| ! | CATGGTGCTAACTTTGCAGT+TGG | + | chr6.1:2616983-2617002 | MS.gene82921:CDS | 45.0% |
| ! | GTGTTCTGGATTCACAACAC+AGG | + | chr6.1:2617966-2617985 | MS.gene82921:CDS | 45.0% |
| ! | TGGATTGGACTATAACCACC+GGG | - | chr6.1:2617025-2617044 | None:intergenic | 45.0% |
| !! | ATGAAGGTGCAAGAGTGTTC+TGG | + | chr6.1:2617952-2617971 | MS.gene82921:CDS | 45.0% |
| AGGGCCTTAGAGAAGTCTTC+AGG | - | chr6.1:2617439-2617458 | None:intergenic | 50.0% | |
| ATCAGCAATGCAAGGAGCCA+AGG | + | chr6.1:2618182-2618201 | MS.gene82921:CDS | 50.0% | |
| GGTGCTAACTTTGCAGTTGG+AGG | + | chr6.1:2616986-2617005 | MS.gene82921:CDS | 50.0% | |
| TTGAGAGGTGATTCTGTCCC+TGG | - | chr6.1:2617400-2617419 | None:intergenic | 50.0% | |
| !! | GGAGGTGCATCGATTCGTCC+CGG | + | chr6.1:2617004-2617023 | MS.gene82921:CDS | 60.0% |
| !! | GGTGCATCGATTCGTCCCGG+TGG | + | chr6.1:2617007-2617026 | MS.gene82921:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 2616494 | 2618262 | 2616494 | ID=MS.gene82921 |
| chr6.1 | mRNA | 2616494 | 2618262 | 2616494 | ID=MS.gene82921.t1;Parent=MS.gene82921 |
| chr6.1 | exon | 2616494 | 2616752 | 2616494 | ID=MS.gene82921.t1.exon1;Parent=MS.gene82921.t1 |
| chr6.1 | CDS | 2616494 | 2616752 | 2616494 | ID=cds.MS.gene82921.t1;Parent=MS.gene82921.t1 |
| chr6.1 | exon | 2616921 | 2617121 | 2616921 | ID=MS.gene82921.t1.exon2;Parent=MS.gene82921.t1 |
| chr6.1 | CDS | 2616921 | 2617121 | 2616921 | ID=cds.MS.gene82921.t1;Parent=MS.gene82921.t1 |
| chr6.1 | exon | 2617401 | 2617573 | 2617401 | ID=MS.gene82921.t1.exon3;Parent=MS.gene82921.t1 |
| chr6.1 | CDS | 2617401 | 2617573 | 2617401 | ID=cds.MS.gene82921.t1;Parent=MS.gene82921.t1 |
| chr6.1 | exon | 2617942 | 2618262 | 2617942 | ID=MS.gene82921.t1.exon4;Parent=MS.gene82921.t1 |
| chr6.1 | CDS | 2617942 | 2618262 | 2617942 | ID=cds.MS.gene82921.t1;Parent=MS.gene82921.t1 |
| Gene Sequence |
| Protein sequence |
