Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83042.t1 | RHN78070.1 | 87.7 | 1033 | 76 | 3 | 2 | 985 | 98 | 1128 | 0.00E+00 | 1810.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83042.t1 | Q9LQV2 | 60.2 | 1036 | 346 | 10 | 2 | 984 | 81 | 1103 | 0.0e+00 | 1210.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83042.t1 | A0A072VR80 | 87.7 | 1033 | 76 | 3 | 2 | 985 | 84 | 1114 | 0.0e+00 | 1810.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052612 | MS.gene83042 | 0.80591 | 1.06E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene83042 | 0.803656 | 3.14E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene83042 | 0.831968 | 1.24E-55 | -1.69E-46 |
| MS.gene056952 | MS.gene83042 | 0.802643 | 5.09E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83042.t1 | MTR_1g032630 | 87.706 | 1033 | 76 | 3 | 2 | 985 | 84 | 1114 | 0.0 | 1857 |
| MS.gene83042.t1 | MTR_1g032720 | 81.704 | 1033 | 139 | 2 | 2 | 985 | 695 | 1726 | 0.0 | 1726 |
| MS.gene83042.t1 | MTR_1g032720 | 60.987 | 669 | 178 | 9 | 2 | 612 | 86 | 729 | 0.0 | 775 |
| MS.gene83042.t1 | MTR_1g032610 | 80.212 | 1036 | 149 | 4 | 2 | 985 | 86 | 1117 | 0.0 | 1679 |
| MS.gene83042.t1 | MTR_1g032610 | 80.212 | 1036 | 149 | 4 | 2 | 985 | 23 | 1054 | 0.0 | 1676 |
| MS.gene83042.t1 | MTR_1g032630 | 86.299 | 708 | 46 | 3 | 2 | 660 | 84 | 789 | 0.0 | 1242 |
| MS.gene83042.t1 | MTR_1g032590 | 55.058 | 1028 | 395 | 10 | 6 | 971 | 85 | 1107 | 0.0 | 1130 |
| MS.gene83042.t1 | MTR_1g032710 | 91.697 | 554 | 46 | 0 | 432 | 985 | 1 | 554 | 0.0 | 1033 |
| MS.gene83042.t1 | MTR_4g106660 | 40.671 | 954 | 504 | 16 | 48 | 962 | 185 | 1115 | 0.0 | 700 |
| MS.gene83042.t1 | MTR_4g106660 | 48.544 | 103 | 53 | 0 | 702 | 804 | 1110 | 1212 | 7.21e-21 | 99.8 |
| MS.gene83042.t1 | MTR_4g106660 | 40.605 | 958 | 507 | 16 | 48 | 966 | 185 | 1119 | 0.0 | 699 |
| MS.gene83042.t1 | MTR_3g107390 | 39.416 | 959 | 505 | 20 | 76 | 976 | 251 | 1191 | 0.0 | 621 |
| MS.gene83042.t1 | MTR_6g088660 | 22.406 | 665 | 368 | 28 | 363 | 933 | 317 | 927 | 8.24e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83042.t1 | AT1G14790 | 60.174 | 1037 | 347 | 10 | 1 | 984 | 80 | 1103 | 0.0 | 1233 |
| MS.gene83042.t1 | AT4G11130 | 39.563 | 1006 | 529 | 21 | 17 | 979 | 159 | 1128 | 0.0 | 697 |
| MS.gene83042.t1 | AT3G49500 | 38.519 | 945 | 508 | 24 | 79 | 968 | 250 | 1176 | 8.48e-177 | 547 |
| MS.gene83042.t1 | AT3G49500 | 38.519 | 945 | 508 | 24 | 79 | 968 | 250 | 1176 | 8.48e-177 | 547 |
| MS.gene83042.t1 | AT3G49500 | 38.519 | 945 | 508 | 24 | 79 | 968 | 250 | 1176 | 8.48e-177 | 547 |
| MS.gene83042.t1 | AT3G49500 | 38.519 | 945 | 508 | 24 | 79 | 968 | 250 | 1176 | 8.48e-177 | 547 |
| MS.gene83042.t1 | AT3G49500 | 38.519 | 945 | 508 | 24 | 79 | 968 | 250 | 1176 | 8.48e-177 | 547 |
| MS.gene83042.t1 | AT2G19930 | 24.681 | 705 | 399 | 30 | 206 | 816 | 180 | 846 | 9.99e-24 | 108 |
| MS.gene83042.t1 | AT2G19930 | 24.681 | 705 | 399 | 30 | 206 | 816 | 174 | 840 | 1.17e-23 | 108 |
| MS.gene83042.t1 | AT2G19930 | 24.294 | 708 | 404 | 28 | 206 | 816 | 174 | 846 | 4.91e-23 | 106 |
| MS.gene83042.t1 | AT2G19910 | 27.802 | 464 | 255 | 18 | 407 | 810 | 401 | 844 | 5.03e-22 | 103 |
| MS.gene83042.t1 | AT2G19910 | 27.484 | 473 | 254 | 19 | 407 | 810 | 401 | 853 | 1.62e-20 | 98.2 |
| MS.gene83042.t1 | AT2G19920 | 25.295 | 593 | 324 | 27 | 305 | 804 | 281 | 847 | 1.18e-18 | 92.4 |
| MS.gene83042.t1 | AT2G19920 | 25.295 | 593 | 324 | 27 | 305 | 804 | 267 | 833 | 1.64e-18 | 91.7 |
| MS.gene83042.t1 | AT2G19920 | 25.295 | 593 | 324 | 27 | 305 | 804 | 268 | 834 | 1.69e-18 | 91.7 |
| MS.gene83042.t1 | AT2G19920 | 25.295 | 593 | 324 | 27 | 305 | 804 | 267 | 833 | 1.78e-18 | 91.7 |
Find 216 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAAGATTCTCTGTATTT+TGG | 0.106537 | 1.4:+17239454 | MS.gene83042:CDS |
| TATTACATTCTTTGATTTAT+AGG | 0.118908 | 1.4:-17243878 | None:intergenic |
| CAATGATGCTGCAGACATTT+AGG | 0.140329 | 1.4:+17242054 | MS.gene83042:CDS |
| GTTCAGCACGGCTGTCTTTC+AGG | 0.142842 | 1.4:+17240865 | MS.gene83042:CDS |
| GACGATGTTAAACTGTATTT+TGG | 0.159141 | 1.4:+17239417 | MS.gene83042:CDS |
| CTCTTCTGTTTGTAGTTAAT+TGG | 0.176066 | 1.4:+17240499 | MS.gene83042:intron |
| CCCATCATTGCTCTTCCTTT+TGG | 0.190630 | 1.4:-17242122 | None:intergenic |
| TATGGAATTCGAGGGCTTTA+TGG | 0.210906 | 1.4:+17243996 | MS.gene83042:CDS |
| CATGAAGTCTGGATATTCTT+TGG | 0.237086 | 1.4:-17243836 | None:intergenic |
| TAACATAAAATTGGATGTTT+TGG | 0.238256 | 1.4:+17241788 | MS.gene83042:CDS |
| GCACGGATCCATTGCTTATC+AGG | 0.255539 | 1.4:-17240604 | None:intergenic |
| CTATTTAAAAGTTATGAAAA+TGG | 0.261211 | 1.4:+17239350 | None:intergenic |
| GAAACTAGAACCTTAGAATA+TGG | 0.263426 | 1.4:+17242155 | MS.gene83042:CDS |
| TCCATTGGTTCAATTGTTCT+AGG | 0.267079 | 1.4:-17242821 | None:intergenic |
| GCTAGACTTGGACAGTCTTT+TGG | 0.267504 | 1.4:+17241492 | MS.gene83042:CDS |
| AGCTAAGGCACATGAGGTTT+TGG | 0.280249 | 1.4:+17241947 | MS.gene83042:CDS |
| AATGATGCTGCAGACATTTA+GGG | 0.287232 | 1.4:+17242055 | MS.gene83042:CDS |
| ATCTCCCATCCATTCCCTTA+TGG | 0.297497 | 1.4:-17241436 | None:intergenic |
| ACTTACCATCATAGTTACTA+TGG | 0.312137 | 1.4:+17244294 | MS.gene83042:CDS |
| TATAAATCAAAGAATGTAAT+AGG | 0.313545 | 1.4:+17243880 | MS.gene83042:CDS |
| GAAAGAAATGGCTCAACATT+AGG | 0.318451 | 1.4:-17242032 | None:intergenic |
| TTCACTCCTTGCAGTTGTAT+TGG | 0.326260 | 1.4:+17240634 | MS.gene83042:CDS |
| TGATTCAGATAACATAAAAT+TGG | 0.328974 | 1.4:+17241779 | MS.gene83042:CDS |
| CGATCTTTCAGCCATCTTGC+AGG | 0.333220 | 1.4:-17241003 | None:intergenic |
| GCTCGAATGCATCCTCATTC+TGG | 0.335394 | 1.4:-17244406 | None:intergenic |
| GGGACATCTACTTTGTTTGT+TGG | 0.336396 | 1.4:+17242780 | MS.gene83042:CDS |
| TAGAAGAATGCCGTTGGCTT+TGG | 0.337561 | 1.4:-17239387 | None:intergenic |
| TGCCATCCGCGTTTCAGATT+CGG | 0.342405 | 1.4:+17241676 | MS.gene83042:CDS |
| TCACTCCTTGCAGTTGTATT+GGG | 0.345151 | 1.4:+17240635 | MS.gene83042:CDS |
| TTGTTCAATATTCTAGCAAT+AGG | 0.353250 | 1.4:+17242186 | MS.gene83042:CDS |
| CAGTCATTCTCATGTAGTTA+AGG | 0.361964 | 1.4:+17242214 | MS.gene83042:CDS |
| TCGATCACCGACTATATCTT+TGG | 0.366042 | 1.4:+17241059 | MS.gene83042:CDS |
| GGTGGTACCGGTATAGATTC+TGG | 0.366224 | 1.4:+17244228 | MS.gene83042:CDS |
| CAATATCTATGCCATTTCTA+AGG | 0.372511 | 1.4:-17241314 | None:intergenic |
| ACATCCGGATTGCAAGAAAA+AGG | 0.372730 | 1.4:-17240772 | None:intergenic |
| GGAAAACTTTGTTCATTATG+AGG | 0.373843 | 1.4:+17240714 | MS.gene83042:CDS |
| CGACTATATCTTTGGATAAC+GGG | 0.374346 | 1.4:+17241067 | MS.gene83042:CDS |
| CTTAGAAATGGCATAGATAT+TGG | 0.374817 | 1.4:+17241315 | MS.gene83042:CDS |
| TTCTGCCCAACCTATTGTAT+TGG | 0.375119 | 1.4:+17242850 | MS.gene83042:CDS |
| TGATCCACTACTCAAAATAA+AGG | 0.375539 | 1.4:+17240921 | MS.gene83042:CDS |
| ACTGTCATTGAGTATATAAT+TGG | 0.384132 | 1.4:-17243659 | None:intergenic |
| TCTTCACGTATTTCTAAGAA+TGG | 0.393521 | 1.4:+17241258 | MS.gene83042:CDS |
| GGACATCTACTTTGTTTGTT+GGG | 0.393937 | 1.4:+17242781 | MS.gene83042:CDS |
| TCACTTCCGGAACACTCGTT+TGG | 0.395235 | 1.4:-17242749 | None:intergenic |
| ATTCTTTCCATCCTTAGAAA+TGG | 0.402135 | 1.4:+17241303 | MS.gene83042:CDS |
| ATGTTTGCTCGTACAACAAC+TGG | 0.409301 | 1.4:+17241399 | MS.gene83042:CDS |
| AGAAATACGTGAAGATAAAT+CGG | 0.410629 | 1.4:-17241250 | None:intergenic |
| ATTTAGGGCATCAAAGTTGT+TGG | 0.421669 | 1.4:+17242070 | MS.gene83042:CDS |
| AAACTAGAACCTTAGAATAT+GGG | 0.421804 | 1.4:+17242156 | MS.gene83042:CDS |
| AAAAGTTATCGATATGTTGA+TGG | 0.424991 | 1.4:-17241182 | None:intergenic |
| TATGTCTTCTCTGATGGAAT+CGG | 0.427238 | 1.4:+17241597 | MS.gene83042:CDS |
| TCCATCAGAGAAGACATATT+CGG | 0.427902 | 1.4:-17241592 | None:intergenic |
| CAGAGATTAATGTCTCAAAT+CGG | 0.428075 | 1.4:+17241145 | MS.gene83042:CDS |
| ACTTTAAACAAGATGTGAAA+TGG | 0.429644 | 1.4:-17240832 | None:intergenic |
| CATCCATTCCCTTATGGAAT+CGG | 0.429954 | 1.4:-17241430 | None:intergenic |
| CTTGTTTAAAGTTAATTCCT+TGG | 0.431052 | 1.4:+17240843 | MS.gene83042:CDS |
| ACCATGGAAAGCTTAGAAAA+TGG | 0.431302 | 1.4:-17244344 | None:intergenic |
| ACATCATGATCCAATACAAT+AGG | 0.434504 | 1.4:-17242860 | None:intergenic |
| GACTTACCGCCGATTCCATA+AGG | 0.435845 | 1.4:+17241421 | MS.gene83042:CDS |
| CAAAATCGTTCAACAAAAGA+AGG | 0.436533 | 1.4:+17244139 | MS.gene83042:CDS |
| TGCAGCATCATTGAAAGAAA+TGG | 0.437283 | 1.4:-17242044 | None:intergenic |
| TCCAAAAGGAAGAGCAATGA+TGG | 0.437443 | 1.4:+17242121 | MS.gene83042:CDS |
| TTAGATACACTTGTTGATGT+AGG | 0.439715 | 1.4:-17240550 | None:intergenic |
| CCGACTATATCTTTGGATAA+CGG | 0.440826 | 1.4:+17241066 | MS.gene83042:CDS |
| CCATGTTTAACCTTCGCGTC+AGG | 0.441759 | 1.4:-17241564 | None:intergenic |
| CAAAGAATATCCAGACTTCA+TGG | 0.444746 | 1.4:+17243837 | MS.gene83042:CDS |
| GTCCCCGTCTAGATCACTTC+CGG | 0.446184 | 1.4:-17242762 | None:intergenic |
| GGCTCAGACATTGCTTTAGC+AGG | 0.447457 | 1.4:-17243727 | None:intergenic |
| GGAGTCATATGATTCGGATA+TGG | 0.447757 | 1.4:+17243978 | MS.gene83042:CDS |
| ACAAATTATGACTACAAGTT+GGG | 0.449489 | 1.4:+17244048 | MS.gene83042:CDS |
| TGTACAATGAAGGTATGAAA+AGG | 0.454846 | 1.4:+17244319 | MS.gene83042:CDS |
| ACTAGGATATTTATTCCAAA+AGG | 0.454891 | 1.4:+17242107 | MS.gene83042:CDS |
| AGTCATTCTCATGTAGTTAA+GGG | 0.456086 | 1.4:+17242215 | MS.gene83042:CDS |
| GGGTATAACTGCTGGGATAC+CGG | 0.456638 | 1.4:-17243800 | None:intergenic |
| GCTAAATATGCTGCTAGACT+TGG | 0.459175 | 1.4:+17241480 | MS.gene83042:CDS |
| AACAAATTATGACTACAAGT+TGG | 0.460381 | 1.4:+17244047 | MS.gene83042:CDS |
| TCCACCATGTGGTGCAAAGC+TGG | 0.460475 | 1.4:-17242308 | None:intergenic |
| GGATGAAGATGCGATTACTA+TGG | 0.463160 | 1.4:+17244161 | MS.gene83042:CDS |
| GGCTAAGGAGTCATATGATT+CGG | 0.463518 | 1.4:+17243972 | MS.gene83042:CDS |
| AACATCGCCCGGGTGCAAGC+AGG | 0.469267 | 1.4:-17242261 | None:intergenic |
| TACTATGGTTTGTACAATGA+AGG | 0.470404 | 1.4:+17244309 | MS.gene83042:CDS |
| CTTCACGTATTTCTAAGAAT+GGG | 0.472233 | 1.4:+17241259 | MS.gene83042:CDS |
| GCAACCATGGGAACAACATC+CGG | 0.476437 | 1.4:-17240787 | None:intergenic |
| CCGGAACACTCGTTTGGATG+TGG | 0.476825 | 1.4:-17242743 | None:intergenic |
| TTCAAAACACGAACATCGCC+CGG | 0.477028 | 1.4:-17242272 | None:intergenic |
| AAATATCTCTTGAACTTGCC+AGG | 0.478082 | 1.4:+17241622 | MS.gene83042:CDS |
| AGAAAAGTTGTACTATTCAA+AGG | 0.481118 | 1.4:+17240966 | MS.gene83042:CDS |
| GGAAATCTGATGGACTACTA+TGG | 0.482352 | 1.4:+17244069 | MS.gene83042:CDS |
| ATCTATGCCATTTCTAAGGA+TGG | 0.483375 | 1.4:-17241310 | None:intergenic |
| CGATTCCATAAGGGAATGGA+TGG | 0.486112 | 1.4:+17241431 | MS.gene83042:CDS |
| TTCGGAAAATCTCTGTTACT+AGG | 0.486188 | 1.4:-17240685 | None:intergenic |
| ACGGGTTGGTATATGTTCGC+AGG | 0.489662 | 1.4:+17241085 | MS.gene83042:CDS |
| TTCATTTGTTGACGAGGAGT+TGG | 0.490048 | 1.4:+17241212 | MS.gene83042:CDS |
| CCACATCCAAACGAGTGTTC+CGG | 0.490224 | 1.4:+17242743 | MS.gene83042:CDS |
| ATGTCTTCTCTGATGGAATC+GGG | 0.491936 | 1.4:+17241598 | MS.gene83042:CDS |
| TTTAATGGTGCAGGAGGTGG+AGG | 0.492095 | 1.4:+17243627 | MS.gene83042:intron |
| ATGATCCAATACAATAGGTT+GGG | 0.494319 | 1.4:-17242855 | None:intergenic |
| ACTGAATCAGAAATCCTTAG+TGG | 0.496693 | 1.4:+17244099 | MS.gene83042:CDS |
| ACCGAATATGTCTTCTCTGA+TGG | 0.497328 | 1.4:+17241591 | MS.gene83042:CDS |
| GTGGTACCGGTATAGATTCT+GGG | 0.497755 | 1.4:+17244229 | MS.gene83042:CDS |
| TATATACTCAATGACAGTCT+TGG | 0.498477 | 1.4:+17243664 | MS.gene83042:CDS |
| CCCATGGTTGCTCCTCCTCA+AGG | 0.503965 | 1.4:+17240799 | MS.gene83042:CDS |
| TTCTCATGTAGTTAAGGGTA+TGG | 0.504964 | 1.4:+17242220 | MS.gene83042:CDS |
| TTTACTTGTTCAAATCAAGA+AGG | 0.509728 | 1.4:+17244377 | MS.gene83042:CDS |
| CGATTTGAGACATTAATCTC+TGG | 0.510436 | 1.4:-17241144 | None:intergenic |
| TGGTTCATTGACGGTGGTAC+CGG | 0.511504 | 1.4:+17244216 | MS.gene83042:CDS |
| CTGAAACTCTAAGCGTCAGC+AGG | 0.513753 | 1.4:+17241523 | MS.gene83042:CDS |
| TGTGAGGTCCCTACGGAAAG+AGG | 0.515157 | 1.4:+17244185 | MS.gene83042:CDS |
| AGAGATTAATGTCTCAAATC+GGG | 0.515941 | 1.4:+17241146 | MS.gene83042:CDS |
| TGGAAGAAAGTTTCAGTCGC+AGG | 0.517680 | 1.4:+17244430 | MS.gene83042:CDS |
| GTACAATGAAGGTATGAAAA+GGG | 0.521264 | 1.4:+17244320 | MS.gene83042:CDS |
| GTTCCGGAAGTGATCTAGAC+GGG | 0.525385 | 1.4:+17242759 | MS.gene83042:CDS |
| TACATCCTTCACACTTGAAG+TGG | 0.526578 | 1.4:+17243951 | MS.gene83042:CDS |
| CATGATCCAATACAATAGGT+TGG | 0.527023 | 1.4:-17242856 | None:intergenic |
| TGATTCGGATATGGAATTCG+AGG | 0.528929 | 1.4:+17243987 | MS.gene83042:CDS |
| CGTTTCAGATTCGGTATGGC+GGG | 0.529342 | 1.4:+17241685 | MS.gene83042:CDS |
| CTTCACACTTGAAGTGGCTA+AGG | 0.531272 | 1.4:+17243957 | MS.gene83042:CDS |
| CACGGATCCATTGCTTATCA+GGG | 0.531733 | 1.4:-17240603 | None:intergenic |
| GCGAGGAGTTGGTTCATTGA+CGG | 0.532679 | 1.4:+17244207 | MS.gene83042:CDS |
| GGATCATGATGTTGAGATTG+AGG | 0.532865 | 1.4:+17242871 | MS.gene83042:CDS |
| AGCTTTGCAAGTTCAATACA+TGG | 0.533550 | 1.4:-17243748 | None:intergenic |
| TACGGAAAGAGGCGAGGAGT+TGG | 0.535667 | 1.4:+17244196 | MS.gene83042:CDS |
| ACTTACCGCCGATTCCATAA+GGG | 0.536172 | 1.4:+17241422 | MS.gene83042:CDS |
| CGATATGTTGATGGAAATGA+CGG | 0.541344 | 1.4:-17241173 | None:intergenic |
| CTACAAGTTGGGAAATCTGA+TGG | 0.542458 | 1.4:+17244059 | MS.gene83042:CDS |
| CAATCCGGATGTTGTTCCCA+TGG | 0.542528 | 1.4:+17240783 | MS.gene83042:CDS |
| TGCAAAGACTGTGTGTGCAT+TGG | 0.543894 | 1.4:-17243695 | None:intergenic |
| ACCTAGAACAATTGAACCAA+TGG | 0.544402 | 1.4:+17242820 | MS.gene83042:CDS |
| TGGGCAGAATCATACTCCAT+TGG | 0.545458 | 1.4:-17242836 | None:intergenic |
| ATTCGGTATGGCGGGTACAA+AGG | 0.545736 | 1.4:+17241693 | MS.gene83042:CDS |
| TATATCTTTGGATAACGGGT+TGG | 0.546193 | 1.4:+17241071 | MS.gene83042:CDS |
| TCCGCGTTTCAGATTCGGTA+TGG | 0.546663 | 1.4:+17241681 | MS.gene83042:CDS |
| GAGAATATTAGTGACTTCAC+CGG | 0.548250 | 1.4:-17241982 | None:intergenic |
| ACATCGCCCGGGTGCAAGCA+GGG | 0.548794 | 1.4:-17242260 | None:intergenic |
| CTATGGCTGTGAGGTCCCTA+CGG | 0.551403 | 1.4:+17244178 | MS.gene83042:CDS |
| AGAAGGAGAAAGCCAGAATG+AGG | 0.551650 | 1.4:+17244394 | MS.gene83042:CDS |
| CCACAAAAGTATACTTTGCA+TGG | 0.555207 | 1.4:-17241120 | None:intergenic |
| CCGCCGATTCCATAAGGGAA+TGG | 0.555415 | 1.4:+17241427 | MS.gene83042:CDS |
| TATTCTTTGGCGAAAAGATG+AGG | 0.556058 | 1.4:-17243823 | None:intergenic |
| TACATTCTTTGATTTATAGG+TGG | 0.561468 | 1.4:-17243875 | None:intergenic |
| TGGAATTGCGACAAAAGACT+AGG | 0.562821 | 1.4:+17242090 | MS.gene83042:CDS |
| CTTATCCACTCTTGATGTCA+AGG | 0.563615 | 1.4:+17241860 | MS.gene83042:CDS |
| TCCTTGAGGAGGAGCAACCA+TGG | 0.565876 | 1.4:-17240800 | None:intergenic |
| GTGCAAAGCTGGCACATCCA+AGG | 0.566277 | 1.4:-17242297 | None:intergenic |
| ATTGGTTCAATTGTTCTAGG+TGG | 0.568502 | 1.4:-17242818 | None:intergenic |
| ATTCTTTGGCGAAAAGATGA+GGG | 0.569082 | 1.4:-17243822 | None:intergenic |
| CAAGGTATTTCAACTGAGGG+TGG | 0.570622 | 1.4:+17243922 | MS.gene83042:CDS |
| CGGGTTGGTATATGTTCGCA+GGG | 0.575499 | 1.4:+17241086 | MS.gene83042:CDS |
| GTTCATTATGAGGAAATCGA+GGG | 0.575939 | 1.4:+17240724 | MS.gene83042:CDS |
| TGTTCATTATGAGGAAATCG+AGG | 0.578092 | 1.4:+17240723 | MS.gene83042:CDS |
| GACAACATCACAGACGAGGT+TGG | 0.580619 | 1.4:-17241732 | None:intergenic |
| ACAAACCATAGTAACTATGA+TGG | 0.581319 | 1.4:-17244299 | None:intergenic |
| ATTCAAGGTATTTCAACTGA+GGG | 0.581387 | 1.4:+17243919 | MS.gene83042:CDS |
| AACTAGAACCTTAGAATATG+GGG | 0.582040 | 1.4:+17242157 | MS.gene83042:CDS |
| AATGAGGATGCATTCGAGCA+TGG | 0.583156 | 1.4:+17244410 | MS.gene83042:CDS |
| GAGATTCCCCTGATAAGCAA+TGG | 0.583787 | 1.4:+17240596 | MS.gene83042:CDS |
| TCAAAACACGAACATCGCCC+GGG | 0.584003 | 1.4:-17242271 | None:intergenic |
| TCTGTTATGAACCTGCAAGA+TGG | 0.584270 | 1.4:+17240992 | MS.gene83042:CDS |
| GATTCGGATATGGAATTCGA+GGG | 0.584692 | 1.4:+17243988 | MS.gene83042:CDS |
| CTGAATCAGAAATCCTTAGT+GGG | 0.584760 | 1.4:+17244100 | MS.gene83042:CDS |
| CCGTTATCCAAAGATATAGT+CGG | 0.588330 | 1.4:-17241066 | None:intergenic |
| AGTTGCGTGAAAACTCGCTA+TGG | 0.589305 | 1.4:+17241376 | MS.gene83042:CDS |
| AAAATCGTTCAACAAAAGAA+GGG | 0.590185 | 1.4:+17244140 | MS.gene83042:CDS |
| GGTATTTGAATTCCTTGAGG+AGG | 0.592430 | 1.4:-17240811 | None:intergenic |
| AAAGATATAGTCGGTGATCG+AGG | 0.593822 | 1.4:-17241057 | None:intergenic |
| TGAAGTCACTAATATTCTCA+AGG | 0.594963 | 1.4:+17241986 | MS.gene83042:CDS |
| CTTAGCCACTTCAAGTGTGA+AGG | 0.595199 | 1.4:-17243956 | None:intergenic |
| GTTAATTCCTTGGTTCAGCA+CGG | 0.599114 | 1.4:+17240853 | MS.gene83042:CDS |
| AGATTCAGCTAAGGCACATG+AGG | 0.600875 | 1.4:+17241941 | MS.gene83042:CDS |
| ACGTGTTTCATTTGTTGACG+AGG | 0.601367 | 1.4:+17241206 | MS.gene83042:CDS |
| ACTCCTCGCCTCTTTCCGTA+GGG | 0.602459 | 1.4:-17244193 | None:intergenic |
| CATATGCAAAAGCTTCAGCT+TGG | 0.602669 | 1.4:+17244262 | MS.gene83042:CDS |
| ATCACTCCCAGAATCTATAC+CGG | 0.603218 | 1.4:-17244235 | None:intergenic |
| TACCGAATCTGAAACGCGGA+TGG | 0.603579 | 1.4:-17241678 | None:intergenic |
| AACTCCTCGCCTCTTTCCGT+AGG | 0.604252 | 1.4:-17244194 | None:intergenic |
| CCAAAAGGAAGAGCAATGAT+GGG | 0.604423 | 1.4:+17242122 | MS.gene83042:CDS |
| AGAAATGGCATAGATATTGG+TGG | 0.607871 | 1.4:+17241318 | MS.gene83042:CDS |
| AAGACAGCCGTGCTGAACCA+AGG | 0.611534 | 1.4:-17240860 | None:intergenic |
| CCTTGAGGAGGAGCAACCAT+GGG | 0.613313 | 1.4:-17240799 | None:intergenic |
| TGTGCCAGCTTTGCACCACA+TGG | 0.616325 | 1.4:+17242304 | MS.gene83042:CDS |
| TCTTGAACTTGCCAGGAGAG+TGG | 0.617568 | 1.4:+17241629 | MS.gene83042:CDS |
| AATGGTATTTGAATTCCTTG+AGG | 0.617830 | 1.4:-17240814 | None:intergenic |
| TATACTAACAGATTCAGCTA+AGG | 0.617875 | 1.4:+17241932 | MS.gene83042:CDS |
| AATTCAAGGTATTTCAACTG+AGG | 0.618205 | 1.4:+17243918 | MS.gene83042:CDS |
| TGGCGGGTACAAAGGAGTTG+TGG | 0.620817 | 1.4:+17241701 | MS.gene83042:CDS |
| GCGTTTCAGATTCGGTATGG+CGG | 0.624067 | 1.4:+17241684 | MS.gene83042:CDS |
| CCATTCCCTTATGGAATCGG+CGG | 0.625630 | 1.4:-17241427 | None:intergenic |
| AGGAATCTTTAGACATATAG+CGG | 0.630016 | 1.4:-17240665 | None:intergenic |
| ACTGTCCTTGACATCAAGAG+TGG | 0.630808 | 1.4:-17241865 | None:intergenic |
| AATCTGTAGAAGAATGCCGT+TGG | 0.636903 | 1.4:-17239393 | None:intergenic |
| AATTGTCGATTGAGATAACA+AGG | 0.636922 | 1.4:-17241828 | None:intergenic |
| AGTAAATCGTAAACACACCA+TGG | 0.638736 | 1.4:-17244360 | None:intergenic |
| AAGGAGTGAAATCTGTCGCA+CGG | 0.639982 | 1.4:-17240621 | None:intergenic |
| CCTGACGCGAAGGTTAAACA+TGG | 0.640840 | 1.4:+17241564 | MS.gene83042:CDS |
| AGATATTGATCCAAAGCCAA+CGG | 0.640968 | 1.4:+17239377 | MS.gene83042:CDS |
| TCTCTGTAATAGTTCTTCAG+AGG | 0.641395 | 1.4:-17240577 | None:intergenic |
| TTCTTTGGCGAAAAGATGAG+GGG | 0.641437 | 1.4:-17243821 | None:intergenic |
| AATCGAGGGTCAATACACAT+TGG | 0.643950 | 1.4:+17240738 | MS.gene83042:CDS |
| GGTCAATACACATTGGAGAG+AGG | 0.645380 | 1.4:+17240745 | MS.gene83042:CDS |
| GACTGCCCAATACAACTGCA+AGG | 0.646493 | 1.4:-17240640 | None:intergenic |
| GATATAGTCGGTGATCGAGG+CGG | 0.647948 | 1.4:-17241054 | None:intergenic |
| AGGAGTTGGTTCATTGACGG+TGG | 0.653077 | 1.4:+17244210 | MS.gene83042:CDS |
| TGTTCCGGAAGTGATCTAGA+CGG | 0.654419 | 1.4:+17242758 | MS.gene83042:CDS |
| CTCAAGGAGATGCTTATCTG+TGG | 0.655771 | 1.4:+17242002 | MS.gene83042:CDS |
| ACGGATCCATTGCTTATCAG+GGG | 0.669281 | 1.4:-17240602 | None:intergenic |
| GGTCCCTACGGAAAGAGGCG+AGG | 0.677635 | 1.4:+17244190 | MS.gene83042:CDS |
| CAGTGACAACATCACAGACG+AGG | 0.679765 | 1.4:-17241736 | None:intergenic |
| GATTCCATAAGGGAATGGAT+GGG | 0.681968 | 1.4:+17241432 | MS.gene83042:CDS |
| TCTTTGGCGAAAAGATGAGG+GGG | 0.692139 | 1.4:-17243820 | None:intergenic |
| GCCAGCTTTGCACCACATGG+TGG | 0.693121 | 1.4:+17242307 | MS.gene83042:CDS |
| AAACAACACAATCCACCATG+TGG | 0.709334 | 1.4:-17242319 | None:intergenic |
| TTCCGGAAGTGATCTAGACG+GGG | 0.717127 | 1.4:+17242760 | MS.gene83042:CDS |
| ATGCGATTACTATGGCTGTG+AGG | 0.732696 | 1.4:+17244169 | MS.gene83042:CDS |
| CGTCTGTGATGTTGTCACTG+AGG | 0.737838 | 1.4:+17241739 | MS.gene83042:CDS |
| GCCATACCGAATCTGAAACG+CGG | 0.743631 | 1.4:-17241682 | None:intergenic |
| GAGGCGGATTATTTGCACTG+AGG | 0.750554 | 1.4:-17241038 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATAAGATTTATCATA+TGG | - | chr1.4:17240478-17240497 | None:intergenic | 15.0% |
| !! | ACAAATAAGATTTATCATAT+GGG | - | chr1.4:17240477-17240496 | None:intergenic | 15.0% |
| !! | ATAAAAAAAATGACAAAAGA+GGG | - | chr1.4:17242680-17242699 | None:intergenic | 15.0% |
| !! | TATAAAAAAAATGACAAAAG+AGG | - | chr1.4:17242681-17242700 | None:intergenic | 15.0% |
| !! | TATAAATCAAAGAATGTAAT+AGG | + | chr1.4:17243880-17243899 | MS.gene83042:CDS | 15.0% |
| !!! | ATGTTTATTTTTAGAAAGTA+AGG | - | chr1.4:17240323-17240342 | None:intergenic | 15.0% |
| !!! | TATCATCTAGAATATTATTT+TGG | + | chr1.4:17242612-17242631 | MS.gene83042:intron | 15.0% |
| !!! | TATTACATTCTTTGATTTAT+AGG | - | chr1.4:17243881-17243900 | None:intergenic | 15.0% |
| !!! | TTTTTCTTGTATTTTTTGTA+TGG | + | chr1.4:17242926-17242945 | MS.gene83042:intron | 15.0% |
| !! | TGATTCAGATAACATAAAAT+TGG | + | chr1.4:17241779-17241798 | MS.gene83042:CDS | 20.0% |
| !!! | AACAATGTTGGTTTTTTTTT+GGG | + | chr1.4:17239778-17239797 | MS.gene83042:intron | 20.0% |
| !!! | AGTTTTATCTTTGTGAAATA+GGG | + | chr1.4:17239742-17239761 | MS.gene83042:intron | 20.0% |
| !!! | ATATTATTTTGGCAAAAGAA+TGG | + | chr1.4:17242623-17242642 | MS.gene83042:intron | 20.0% |
| !!! | ATGTAATAGGAAAACTTTTT+AGG | + | chr1.4:17243893-17243912 | MS.gene83042:CDS | 20.0% |
| !!! | ATTTAGCCACATTTTTTATA+CGG | - | chr1.4:17241467-17241486 | None:intergenic | 20.0% |
| !!! | CTTGATTTTGTTTTTCTTTT+CGG | + | chr1.4:17243116-17243135 | MS.gene83042:intron | 20.0% |
| !!! | TAACATAAAATTGGATGTTT+TGG | + | chr1.4:17241788-17241807 | MS.gene83042:CDS | 20.0% |
| !!! | TAGTTTTATCTTTGTGAAAT+AGG | + | chr1.4:17239741-17239760 | MS.gene83042:intron | 20.0% |
| !!! | TGATTTTTTATGAACAATGT+TGG | + | chr1.4:17239766-17239785 | MS.gene83042:intron | 20.0% |
| !!! | TGTAATAGGAAAACTTTTTA+GGG | + | chr1.4:17243894-17243913 | MS.gene83042:CDS | 20.0% |
| ! | AAAAGTTATCGATATGTTGA+TGG | - | chr1.4:17241185-17241204 | None:intergenic | 25.0% |
| ! | AAAATCGTTCAACAAAAGAA+GGG | + | chr1.4:17244140-17244159 | MS.gene83042:CDS | 25.0% |
| ! | AAACTAGAACCTTAGAATAT+GGG | + | chr1.4:17242156-17242175 | MS.gene83042:CDS | 25.0% |
| ! | AAAGTTGAAGAGATCAAAAT+TGG | - | chr1.4:17240388-17240407 | None:intergenic | 25.0% |
| ! | AACAAATTATGACTACAAGT+TGG | + | chr1.4:17244047-17244066 | MS.gene83042:CDS | 25.0% |
| ! | AATAAGCTAAAAACAGCTTA+TGG | - | chr1.4:17243439-17243458 | None:intergenic | 25.0% |
| ! | AATACAAGAAAAAATGCCTA+TGG | - | chr1.4:17242919-17242938 | None:intergenic | 25.0% |
| ! | ACAAATTATGACTACAAGTT+GGG | + | chr1.4:17244048-17244067 | MS.gene83042:CDS | 25.0% |
| ! | ACTAGGATATTTATTCCAAA+AGG | + | chr1.4:17242107-17242126 | MS.gene83042:CDS | 25.0% |
| ! | ACTGTCATTGAGTATATAAT+TGG | - | chr1.4:17243662-17243681 | None:intergenic | 25.0% |
| ! | ACTTTAAACAAGATGTGAAA+TGG | - | chr1.4:17240835-17240854 | None:intergenic | 25.0% |
| ! | AGAAAAGTTGTACTATTCAA+AGG | + | chr1.4:17240966-17240985 | MS.gene83042:CDS | 25.0% |
| ! | AGAAATACGTGAAGATAAAT+CGG | - | chr1.4:17241253-17241272 | None:intergenic | 25.0% |
| ! | ATAACTTGATTTCTAATACC+AGG | + | chr1.4:17242720-17242739 | MS.gene83042:intron | 25.0% |
| ! | CAAATGGAACAAATTACAAA+TGG | + | chr1.4:17240045-17240064 | MS.gene83042:intron | 25.0% |
| ! | GGTATTAGAAATCAAGTTAT+CGG | - | chr1.4:17242720-17242739 | None:intergenic | 25.0% |
| ! | TAAAACTGTAAGTGTTTGAA+TGG | - | chr1.4:17242527-17242546 | None:intergenic | 25.0% |
| ! | TATGCTAATGTCAAAAACAT+AGG | - | chr1.4:17243305-17243324 | None:intergenic | 25.0% |
| ! | TTAAGTATTCAAGGATATGT+TGG | + | chr1.4:17243596-17243615 | MS.gene83042:intron | 25.0% |
| ! | TTGTTCAATATTCTAGCAAT+AGG | + | chr1.4:17242186-17242205 | MS.gene83042:CDS | 25.0% |
| ! | TTTACTTGTTCAAATCAAGA+AGG | + | chr1.4:17244377-17244396 | MS.gene83042:CDS | 25.0% |
| !! | ATTGATTTATGAGACATCTT+TGG | + | chr1.4:17239878-17239897 | MS.gene83042:intron | 25.0% |
| !! | CTTGTTTAAAGTTAATTCCT+TGG | + | chr1.4:17240843-17240862 | MS.gene83042:CDS | 25.0% |
| !! | TACATTCTTTGATTTATAGG+TGG | - | chr1.4:17243878-17243897 | None:intergenic | 25.0% |
| !! | TGTCATGATATATCTGATTT+TGG | + | chr1.4:17239706-17239725 | MS.gene83042:intron | 25.0% |
| !! | TTTTAGCCGTATAAAAAATG+TGG | + | chr1.4:17241458-17241477 | MS.gene83042:CDS | 25.0% |
| !! | TTTTCATAATATTCCCACTA+AGG | - | chr1.4:17244116-17244135 | None:intergenic | 25.0% |
| !! | TTTTTGCTCCATATGAATTA+TGG | + | chr1.4:17239645-17239664 | MS.gene83042:intron | 25.0% |
| !!! | AAACTTTTTAGGGAAATTCA+AGG | + | chr1.4:17243904-17243923 | MS.gene83042:CDS | 25.0% |
| !!! | ATTTTGTTTTTCTTTTCGGT+AGG | + | chr1.4:17243120-17243139 | MS.gene83042:intron | 25.0% |
| !!! | GAACAATGTTGGTTTTTTTT+TGG | + | chr1.4:17239777-17239796 | MS.gene83042:intron | 25.0% |
| AAAAACTTCCCCATATTCTA+AGG | - | chr1.4:17242168-17242187 | None:intergenic | 30.0% | |
| AAACTTTATTACCACTGCAT+AGG | + | chr1.4:17240129-17240148 | MS.gene83042:intron | 30.0% | |
| AACATCCACCATAATTCATA+TGG | - | chr1.4:17239656-17239675 | None:intergenic | 30.0% | |
| AACTAGAACCTTAGAATATG+GGG | + | chr1.4:17242157-17242176 | MS.gene83042:CDS | 30.0% | |
| AATGGTATTTGAATTCCTTG+AGG | - | chr1.4:17240817-17240836 | None:intergenic | 30.0% | |
| ACAAACCATAGTAACTATGA+TGG | - | chr1.4:17244302-17244321 | None:intergenic | 30.0% | |
| ACATCATGATCCAATACAAT+AGG | - | chr1.4:17242863-17242882 | None:intergenic | 30.0% | |
| ACTTACCATCATAGTTACTA+TGG | + | chr1.4:17244294-17244313 | MS.gene83042:CDS | 30.0% | |
| AGACAATTTAGAAGAGCTTA+TGG | + | chr1.4:17243395-17243414 | MS.gene83042:intron | 30.0% | |
| AGAGATTAATGTCTCAAATC+GGG | + | chr1.4:17241146-17241165 | MS.gene83042:CDS | 30.0% | |
| AGCGCTTAATTAAGTATTCA+AGG | + | chr1.4:17243587-17243606 | MS.gene83042:intron | 30.0% | |
| AGGAATCTTTAGACATATAG+CGG | - | chr1.4:17240668-17240687 | None:intergenic | 30.0% | |
| AGTAATGTCCAATGAGAAAA+TGG | - | chr1.4:17242577-17242596 | None:intergenic | 30.0% | |
| AGTCATTCTCATGTAGTTAA+GGG | + | chr1.4:17242215-17242234 | MS.gene83042:CDS | 30.0% | |
| ATGATCCAATACAATAGGTT+GGG | - | chr1.4:17242858-17242877 | None:intergenic | 30.0% | |
| ATTCTTTCCATCCTTAGAAA+TGG | + | chr1.4:17241303-17241322 | MS.gene83042:CDS | 30.0% | |
| CAAAATCGTTCAACAAAAGA+AGG | + | chr1.4:17244139-17244158 | MS.gene83042:CDS | 30.0% | |
| CAGAGATTAATGTCTCAAAT+CGG | + | chr1.4:17241145-17241164 | MS.gene83042:CDS | 30.0% | |
| CTCTTCTGTTTGTAGTTAAT+TGG | + | chr1.4:17240499-17240518 | MS.gene83042:intron | 30.0% | |
| CTTAGAAATGGCATAGATAT+TGG | + | chr1.4:17241315-17241334 | MS.gene83042:CDS | 30.0% | |
| GAAACTAGAACCTTAGAATA+TGG | + | chr1.4:17242155-17242174 | MS.gene83042:CDS | 30.0% | |
| GGAAAACTTTGTTCATTATG+AGG | + | chr1.4:17240714-17240733 | MS.gene83042:CDS | 30.0% | |
| GGAACAAATTACAAATGGAT+AGG | + | chr1.4:17240050-17240069 | MS.gene83042:intron | 30.0% | |
| TATACTAACAGATTCAGCTA+AGG | + | chr1.4:17241932-17241951 | MS.gene83042:CDS | 30.0% | |
| TATATACTCAATGACAGTCT+TGG | + | chr1.4:17243664-17243683 | MS.gene83042:CDS | 30.0% | |
| TATGCAGTGGTAATAAAGTT+TGG | - | chr1.4:17240130-17240149 | None:intergenic | 30.0% | |
| TGAAGTCACTAATATTCTCA+AGG | + | chr1.4:17241986-17242005 | MS.gene83042:CDS | 30.0% | |
| TGATCCACTACTCAAAATAA+AGG | + | chr1.4:17240921-17240940 | MS.gene83042:CDS | 30.0% | |
| TTGGCTATAGTAAGATTTGA+AGG | + | chr1.4:17239897-17239916 | MS.gene83042:intron | 30.0% | |
| ! | AAGAATGGACATTTTGTCAT+TGG | + | chr1.4:17242638-17242657 | MS.gene83042:intron | 30.0% |
| ! | AATTCAAGGTATTTCAACTG+AGG | + | chr1.4:17243918-17243937 | MS.gene83042:CDS | 30.0% |
| ! | AATTGTCGATTGAGATAACA+AGG | - | chr1.4:17241831-17241850 | None:intergenic | 30.0% |
| ! | ACAAAGTTTTCCCTGAAATT+CGG | - | chr1.4:17240706-17240725 | None:intergenic | 30.0% |
| ! | AGGAAAGATTCTCTGTATTT+TGG | + | chr1.4:17239454-17239473 | MS.gene83042:CDS | 30.0% |
| ! | AGTCAATTCCATTTTCTCAT+TGG | + | chr1.4:17242566-17242585 | MS.gene83042:intron | 30.0% |
| ! | ATTCAAGGTATTTCAACTGA+GGG | + | chr1.4:17243919-17243938 | MS.gene83042:CDS | 30.0% |
| ! | CAATATCTATGCCATTTCTA+AGG | - | chr1.4:17241317-17241336 | None:intergenic | 30.0% |
| ! | CTTCACGTATTTCTAAGAAT+GGG | + | chr1.4:17241259-17241278 | MS.gene83042:CDS | 30.0% |
| ! | GAAAGATTCTCTGTATTTTG+GGG | + | chr1.4:17239456-17239475 | MS.gene83042:CDS | 30.0% |
| ! | GACGATGTTAAACTGTATTT+TGG | + | chr1.4:17239417-17239436 | MS.gene83042:CDS | 30.0% |
| ! | GGAAAGATTCTCTGTATTTT+GGG | + | chr1.4:17239455-17239474 | MS.gene83042:CDS | 30.0% |
| ! | GTACAATGAAGGTATGAAAA+GGG | + | chr1.4:17244320-17244339 | MS.gene83042:CDS | 30.0% |
| ! | TACTATGGTTTGTACAATGA+AGG | + | chr1.4:17244309-17244328 | MS.gene83042:CDS | 30.0% |
| ! | TCTTCACGTATTTCTAAGAA+TGG | + | chr1.4:17241258-17241277 | MS.gene83042:CDS | 30.0% |
| ! | TGTACAATGAAGGTATGAAA+AGG | + | chr1.4:17244319-17244338 | MS.gene83042:CDS | 30.0% |
| ! | TTAGATACACTTGTTGATGT+AGG | - | chr1.4:17240553-17240572 | None:intergenic | 30.0% |
| ! | TTGTTCCATTTGTTGCAATT+TGG | - | chr1.4:17240037-17240056 | None:intergenic | 30.0% |
| ! | TTTTGTAAGGATGAGTTAAG+CGG | - | chr1.4:17240084-17240103 | None:intergenic | 30.0% |
| !! | ATGTTGGTAACATGGTTTAA+TGG | + | chr1.4:17243612-17243631 | MS.gene83042:intron | 30.0% |
| !!! | GTTTTTTTTTGGGTGTAAAC+CGG | + | chr1.4:17239788-17239807 | MS.gene83042:intron | 30.0% |
| !!! | TCAACCTTTATTTTGAGTAG+TGG | - | chr1.4:17240928-17240947 | None:intergenic | 30.0% |
| !!! | TGTGTTGTTTTTCCTCAAAA+AGG | + | chr1.4:17242332-17242351 | MS.gene83042:CDS | 30.0% |
| !!! | TTTTTTTTTGGGTGTAAACC+GGG | + | chr1.4:17239789-17239808 | MS.gene83042:intron | 30.0% |
| AAAAATTATTCCTGACGCGA+AGG | + | chr1.4:17241554-17241573 | MS.gene83042:CDS | 35.0% | |
| AAATATCTCTTGAACTTGCC+AGG | + | chr1.4:17241622-17241641 | MS.gene83042:CDS | 35.0% | |
| AACTGTAAGTGTTTGAATGG+AGG | - | chr1.4:17242524-17242543 | None:intergenic | 35.0% | |
| AATGATGCTGCAGACATTTA+GGG | + | chr1.4:17242055-17242074 | MS.gene83042:CDS | 35.0% | |
| ACATTAAGCTCAAAAACACG+AGG | - | chr1.4:17240529-17240548 | None:intergenic | 35.0% | |
| ACCATGGAAAGCTTAGAAAA+TGG | - | chr1.4:17244347-17244366 | None:intergenic | 35.0% | |
| ACCTAGAACAATTGAACCAA+TGG | + | chr1.4:17242820-17242839 | MS.gene83042:CDS | 35.0% | |
| ACTGAATCAGAAATCCTTAG+TGG | + | chr1.4:17244099-17244118 | MS.gene83042:CDS | 35.0% | |
| AGAAATGGCATAGATATTGG+TGG | + | chr1.4:17241318-17241337 | MS.gene83042:CDS | 35.0% | |
| AGATATTGATCCAAAGCCAA+CGG | + | chr1.4:17239377-17239396 | MS.gene83042:CDS | 35.0% | |
| AGCTTTGCAAGTTCAATACA+TGG | - | chr1.4:17243751-17243770 | None:intergenic | 35.0% | |
| AGTAAATCGTAAACACACCA+TGG | - | chr1.4:17244363-17244382 | None:intergenic | 35.0% | |
| ATTCTGTTGATCATGCACAA+TGG | - | chr1.4:17242389-17242408 | None:intergenic | 35.0% | |
| ATTCTTTGGCGAAAAGATGA+GGG | - | chr1.4:17243825-17243844 | None:intergenic | 35.0% | |
| CAAAGAATATCCAGACTTCA+TGG | + | chr1.4:17243837-17243856 | MS.gene83042:CDS | 35.0% | |
| CAGTCATTCTCATGTAGTTA+AGG | + | chr1.4:17242214-17242233 | MS.gene83042:CDS | 35.0% | |
| CATGAAGTCTGGATATTCTT+TGG | - | chr1.4:17243839-17243858 | None:intergenic | 35.0% | |
| CATGATCCAATACAATAGGT+TGG | - | chr1.4:17242859-17242878 | None:intergenic | 35.0% | |
| CCGACTATATCTTTGGATAA+CGG | + | chr1.4:17241066-17241085 | MS.gene83042:CDS | 35.0% | |
| CCGTTATCCAAAGATATAGT+CGG | - | chr1.4:17241069-17241088 | None:intergenic | 35.0% | |
| CGACTATATCTTTGGATAAC+GGG | + | chr1.4:17241067-17241086 | MS.gene83042:CDS | 35.0% | |
| CTGAATCAGAAATCCTTAGT+GGG | + | chr1.4:17244100-17244119 | MS.gene83042:CDS | 35.0% | |
| CTTGCTCAACATGAAATCAA+AGG | - | chr1.4:17239950-17239969 | None:intergenic | 35.0% | |
| GAAAGAAATGGCTCAACATT+AGG | - | chr1.4:17242035-17242054 | None:intergenic | 35.0% | |
| GAAAGTAGAATTTCCAACAG+CGG | + | chr1.4:17240266-17240285 | MS.gene83042:intron | 35.0% | |
| GAAATAAAAATTGCCGCTGT+TGG | - | chr1.4:17240282-17240301 | None:intergenic | 35.0% | |
| GAGAATATTAGTGACTTCAC+CGG | - | chr1.4:17241985-17242004 | None:intergenic | 35.0% | |
| GTTCATTATGAGGAAATCGA+GGG | + | chr1.4:17240724-17240743 | MS.gene83042:CDS | 35.0% | |
| GTTTGAACTTCTTATCGTCA+TGG | - | chr1.4:17239542-17239561 | None:intergenic | 35.0% | |
| TATGTCTTCTCTGATGGAAT+CGG | + | chr1.4:17241597-17241616 | MS.gene83042:CDS | 35.0% | |
| TATTCTTTGGCGAAAAGATG+AGG | - | chr1.4:17243826-17243845 | None:intergenic | 35.0% | |
| TCAAGAATGATGATCAACGA+GGG | + | chr1.4:17243069-17243088 | MS.gene83042:intron | 35.0% | |
| TCCAACACCTTTATTGTGTT+GGG | - | chr1.4:17240197-17240216 | None:intergenic | 35.0% | |
| TCCATCAGAGAAGACATATT+CGG | - | chr1.4:17241595-17241614 | None:intergenic | 35.0% | |
| TCTCTCCAAATTGCAACAAA+TGG | + | chr1.4:17240029-17240048 | MS.gene83042:intron | 35.0% | |
| TCTCTGTAATAGTTCTTCAG+AGG | - | chr1.4:17240580-17240599 | None:intergenic | 35.0% | |
| TGCAGCATCATTGAAAGAAA+TGG | - | chr1.4:17242047-17242066 | None:intergenic | 35.0% | |
| TGGAAATTCTACTTTCCTTG+TGG | - | chr1.4:17240262-17240281 | None:intergenic | 35.0% | |
| TGTTCATTATGAGGAAATCG+AGG | + | chr1.4:17240723-17240742 | MS.gene83042:CDS | 35.0% | |
| TTCAAGAATGATGATCAACG+AGG | + | chr1.4:17243068-17243087 | MS.gene83042:intron | 35.0% | |
| TTCGGAAAATCTCTGTTACT+AGG | - | chr1.4:17240688-17240707 | None:intergenic | 35.0% | |
| TTCTCATGTAGTTAAGGGTA+TGG | + | chr1.4:17242220-17242239 | MS.gene83042:CDS | 35.0% | |
| TTCTTATGCCTTATGAAGCA+TGG | - | chr1.4:17243369-17243388 | None:intergenic | 35.0% | |
| TTGCTCCATATGAATTATGG+TGG | + | chr1.4:17239648-17239667 | MS.gene83042:intron | 35.0% | |
| TTTGTAAGGATGAGTTAAGC+GGG | - | chr1.4:17240083-17240102 | None:intergenic | 35.0% | |
| ! | ACAGAGATTTTCCGAATTTC+AGG | + | chr1.4:17240692-17240711 | MS.gene83042:CDS | 35.0% |
| ! | ACCATTTTCTAAGCTTTCCA+TGG | + | chr1.4:17244343-17244362 | MS.gene83042:CDS | 35.0% |
| ! | ATCACCTTTTTCTTGCAATC+CGG | + | chr1.4:17240768-17240787 | MS.gene83042:CDS | 35.0% |
| ! | ATCTATGCCATTTCTAAGGA+TGG | - | chr1.4:17241313-17241332 | None:intergenic | 35.0% |
| ! | ATGGATGCTAGTGTAGATTT+TGG | + | chr1.4:17239483-17239502 | MS.gene83042:intron | 35.0% |
| ! | ATTGGTTCAATTGTTCTAGG+TGG | - | chr1.4:17242821-17242840 | None:intergenic | 35.0% |
| ! | ATTTAGGGCATCAAAGTTGT+TGG | + | chr1.4:17242070-17242089 | MS.gene83042:CDS | 35.0% |
| ! | CAGAGATTTTCCGAATTTCA+GGG | + | chr1.4:17240693-17240712 | MS.gene83042:CDS | 35.0% |
| ! | CCACAAAAGTATACTTTGCA+TGG | - | chr1.4:17241123-17241142 | None:intergenic | 35.0% |
| ! | CCATGCAAAGTATACTTTTG+TGG | + | chr1.4:17241120-17241139 | MS.gene83042:CDS | 35.0% |
| ! | CGATATGTTGATGGAAATGA+CGG | - | chr1.4:17241176-17241195 | None:intergenic | 35.0% |
| ! | CGATTTGAGACATTAATCTC+TGG | - | chr1.4:17241147-17241166 | None:intergenic | 35.0% |
| ! | CTCAAGATAGCTATTTCACA+AGG | - | chr1.4:17239855-17239874 | None:intergenic | 35.0% |
| ! | GGACATCTACTTTGTTTGTT+GGG | + | chr1.4:17242781-17242800 | MS.gene83042:CDS | 35.0% |
| ! | TGGATGCTAGTGTAGATTTT+GGG | + | chr1.4:17239484-17239503 | MS.gene83042:intron | 35.0% |
| ! | TTTTTCCTCAAAAAGGTCAC+AGG | + | chr1.4:17242339-17242358 | MS.gene83042:CDS | 35.0% |
| ! | TTTTTCTTTTCGGTAGGAGA+TGG | + | chr1.4:17243126-17243145 | MS.gene83042:intron | 35.0% |
| !! | GCAGTTGATTTTCCAAAAAC+CGG | + | chr1.4:17243781-17243800 | MS.gene83042:CDS | 35.0% |
| !! | TATATCTTTGGATAACGGGT+TGG | + | chr1.4:17241071-17241090 | MS.gene83042:CDS | 35.0% |
| !! | TCAAGGATATGTTGGTAACA+TGG | + | chr1.4:17243604-17243623 | MS.gene83042:intron | 35.0% |
| !! | TCCATTGGTTCAATTGTTCT+AGG | - | chr1.4:17242824-17242843 | None:intergenic | 35.0% |
| !!! | GATTTATAGGTGGTTTTGTC+AGG | - | chr1.4:17243868-17243887 | None:intergenic | 35.0% |
| AAACAACACAATCCACCATG+TGG | - | chr1.4:17242322-17242341 | None:intergenic | 40.0% | |
| AAAGATATAGTCGGTGATCG+AGG | - | chr1.4:17241060-17241079 | None:intergenic | 40.0% | |
| AAGAATGATGATCAACGAGG+GGG | + | chr1.4:17243071-17243090 | MS.gene83042:intron | 40.0% | |
| AATCGAGGGTCAATACACAT+TGG | + | chr1.4:17240738-17240757 | MS.gene83042:CDS | 40.0% | |
| AATCTGTAGAAGAATGCCGT+TGG | - | chr1.4:17239396-17239415 | None:intergenic | 40.0% | |
| ACAGTTATCACTGTACAAGC+TGG | - | chr1.4:17240107-17240126 | None:intergenic | 40.0% | |
| ACATCCGGATTGCAAGAAAA+AGG | - | chr1.4:17240775-17240794 | None:intergenic | 40.0% | |
| ACCGAATATGTCTTCTCTGA+TGG | + | chr1.4:17241591-17241610 | MS.gene83042:CDS | 40.0% | |
| AGGAGAGTGGCTAAAAAATG+TGG | + | chr1.4:17241642-17241661 | MS.gene83042:CDS | 40.0% | |
| ATCACTCCCAGAATCTATAC+CGG | - | chr1.4:17244238-17244257 | None:intergenic | 40.0% | |
| ATGTCTTCTCTGATGGAATC+GGG | + | chr1.4:17241598-17241617 | MS.gene83042:CDS | 40.0% | |
| ATGTTTGCTCGTACAACAAC+TGG | + | chr1.4:17241399-17241418 | MS.gene83042:CDS | 40.0% | |
| CAAGAATGATGATCAACGAG+GGG | + | chr1.4:17243070-17243089 | MS.gene83042:intron | 40.0% | |
| CAATGATGCTGCAGACATTT+AGG | + | chr1.4:17242054-17242073 | MS.gene83042:CDS | 40.0% | |
| CATATGCAAAAGCTTCAGCT+TGG | + | chr1.4:17244262-17244281 | MS.gene83042:CDS | 40.0% | |
| CATCCATTCCCTTATGGAAT+CGG | - | chr1.4:17241433-17241452 | None:intergenic | 40.0% | |
| CCAAAAGGAAGAGCAATGAT+GGG | + | chr1.4:17242122-17242141 | MS.gene83042:CDS | 40.0% | |
| CCTATGGATGTAAAGCTCAA+AGG | - | chr1.4:17242903-17242922 | None:intergenic | 40.0% | |
| CCTTTGAGCTTTACATCCAT+AGG | + | chr1.4:17242900-17242919 | MS.gene83042:intron | 40.0% | |
| CTCCAACACCTTTATTGTGT+TGG | - | chr1.4:17240198-17240217 | None:intergenic | 40.0% | |
| CTTATCCACTCTTGATGTCA+AGG | + | chr1.4:17241860-17241879 | MS.gene83042:CDS | 40.0% | |
| CTTCATGCCCAACACAATAA+AGG | + | chr1.4:17240187-17240206 | MS.gene83042:intron | 40.0% | |
| CTTTATTGTGTTGGGCATGA+AGG | - | chr1.4:17240189-17240208 | None:intergenic | 40.0% | |
| GATTCCATAAGGGAATGGAT+GGG | + | chr1.4:17241432-17241451 | MS.gene83042:CDS | 40.0% | |
| GATTCGGATATGGAATTCGA+GGG | + | chr1.4:17243988-17244007 | MS.gene83042:CDS | 40.0% | |
| GCTAAATATGCTGCTAGACT+TGG | + | chr1.4:17241480-17241499 | MS.gene83042:CDS | 40.0% | |
| GGATCATGATGTTGAGATTG+AGG | + | chr1.4:17242871-17242890 | MS.gene83042:CDS | 40.0% | |
| GGATGAAGATGCGATTACTA+TGG | + | chr1.4:17244161-17244180 | MS.gene83042:CDS | 40.0% | |
| GGCTAAGGAGTCATATGATT+CGG | + | chr1.4:17243972-17243991 | MS.gene83042:CDS | 40.0% | |
| GGTATTTGAATTCCTTGAGG+AGG | - | chr1.4:17240814-17240833 | None:intergenic | 40.0% | |
| GTAACATGGTTTAATGGTGC+AGG | + | chr1.4:17243618-17243637 | MS.gene83042:intron | 40.0% | |
| GTTAATTCCTTGGTTCAGCA+CGG | + | chr1.4:17240853-17240872 | MS.gene83042:CDS | 40.0% | |
| TACATCCTTCACACTTGAAG+TGG | + | chr1.4:17243951-17243970 | MS.gene83042:CDS | 40.0% | |
| TATGGAATTCGAGGGCTTTA+TGG | + | chr1.4:17243996-17244015 | MS.gene83042:CDS | 40.0% | |
| TCACTCCTTGCAGTTGTATT+GGG | + | chr1.4:17240635-17240654 | MS.gene83042:CDS | 40.0% | |
| TCCAAAAGGAAGAGCAATGA+TGG | + | chr1.4:17242121-17242140 | MS.gene83042:CDS | 40.0% | |
| TCTGTTATGAACCTGCAAGA+TGG | + | chr1.4:17240992-17241011 | MS.gene83042:CDS | 40.0% | |
| TGGAATTGCGACAAAAGACT+AGG | + | chr1.4:17242090-17242109 | MS.gene83042:CDS | 40.0% | |
| TTCACTCCTTGCAGTTGTAT+TGG | + | chr1.4:17240634-17240653 | MS.gene83042:CDS | 40.0% | |
| TTCTGCCCAACCTATTGTAT+TGG | + | chr1.4:17242850-17242869 | MS.gene83042:CDS | 40.0% | |
| TTCTTTGGCGAAAAGATGAG+GGG | - | chr1.4:17243824-17243843 | None:intergenic | 40.0% | |
| TTGGGATTGGATTGAGAAAG+TGG | + | chr1.4:17239502-17239521 | MS.gene83042:intron | 40.0% | |
| ! | ACGTGTTTCATTTGTTGACG+AGG | + | chr1.4:17241206-17241225 | MS.gene83042:CDS | 40.0% |
| ! | ATCTACCTGTGACCTTTTTG+AGG | - | chr1.4:17242347-17242366 | None:intergenic | 40.0% |
| ! | CTACAAGTTGGGAAATCTGA+TGG | + | chr1.4:17244059-17244078 | MS.gene83042:CDS | 40.0% |
| ! | GGAGTCATATGATTCGGATA+TGG | + | chr1.4:17243978-17243997 | MS.gene83042:CDS | 40.0% |
| ! | GGGACATCTACTTTGTTTGT+TGG | + | chr1.4:17242780-17242799 | MS.gene83042:CDS | 40.0% |
| ! | TCGATCACCGACTATATCTT+TGG | + | chr1.4:17241059-17241078 | MS.gene83042:CDS | 40.0% |
| ! | TGATTCGGATATGGAATTCG+AGG | + | chr1.4:17243987-17244006 | MS.gene83042:CDS | 40.0% |
| ! | TTCATTTGTTGACGAGGAGT+TGG | + | chr1.4:17241212-17241231 | MS.gene83042:CDS | 40.0% |
| !! | CAACACAATAAAGGTGTTGG+AGG | + | chr1.4:17240196-17240215 | MS.gene83042:intron | 40.0% |
| !! | CTCTGTATTTTGGGGAAAGA+TGG | + | chr1.4:17239464-17239483 | MS.gene83042:CDS | 40.0% |
| !! | GGAAATCTGATGGACTACTA+TGG | + | chr1.4:17244069-17244088 | MS.gene83042:CDS | 40.0% |
| !! | GTTTTGGACTTGATGTGTTC+CGG | + | chr1.4:17241963-17241982 | MS.gene83042:CDS | 40.0% |
| !! | TTTTGGCTGTCAGATCTCAA+AGG | + | chr1.4:17239434-17239453 | MS.gene83042:CDS | 40.0% |
| !!! | ACATTTTTTAGCCACTCTCC+TGG | - | chr1.4:17241643-17241662 | None:intergenic | 40.0% |
| !!! | CTGTACAAGCTGGTTTTGTA+AGG | - | chr1.4:17240097-17240116 | None:intergenic | 40.0% |
| !!! | GCTAGTGTAGATTTTGGGAT+TGG | + | chr1.4:17239489-17239508 | MS.gene83042:intron | 40.0% |
| !!! | TGTTCGTGTTTTGAAAGCCT+TGG | + | chr1.4:17242280-17242299 | MS.gene83042:CDS | 40.0% |
| AAGGAGTGAAATCTGTCGCA+CGG | - | chr1.4:17240624-17240643 | None:intergenic | 45.0% | |
| AATGAGGATGCATTCGAGCA+TGG | + | chr1.4:17244410-17244429 | MS.gene83042:CDS | 45.0% | |
| ACATGGTTTAATGGTGCAGG+AGG | + | chr1.4:17243621-17243640 | MS.gene83042:intron | 45.0% | |
| ACGGATCCATTGCTTATCAG+GGG | - | chr1.4:17240605-17240624 | None:intergenic | 45.0% | |
| ACTGTCCTTGACATCAAGAG+TGG | - | chr1.4:17241868-17241887 | None:intergenic | 45.0% | |
| AGAAGGAGAAAGCCAGAATG+AGG | + | chr1.4:17244394-17244413 | MS.gene83042:CDS | 45.0% | |
| AGATTCAGCTAAGGCACATG+AGG | + | chr1.4:17241941-17241960 | MS.gene83042:CDS | 45.0% | |
| AGTTGCGTGAAAACTCGCTA+TGG | + | chr1.4:17241376-17241395 | MS.gene83042:CDS | 45.0% | |
| ATCTCCCATCCATTCCCTTA+TGG | - | chr1.4:17241439-17241458 | None:intergenic | 45.0% | |
| ATGCGATTACTATGGCTGTG+AGG | + | chr1.4:17244169-17244188 | MS.gene83042:CDS | 45.0% | |
| CACGGATCCATTGCTTATCA+GGG | - | chr1.4:17240606-17240625 | None:intergenic | 45.0% | |
| CGATTCCATAAGGGAATGGA+TGG | + | chr1.4:17241431-17241450 | MS.gene83042:CDS | 45.0% | |
| CTCAAGGAGATGCTTATCTG+TGG | + | chr1.4:17242002-17242021 | MS.gene83042:CDS | 45.0% | |
| CTTAGCCACTTCAAGTGTGA+AGG | - | chr1.4:17243959-17243978 | None:intergenic | 45.0% | |
| CTTCACACTTGAAGTGGCTA+AGG | + | chr1.4:17243957-17243976 | MS.gene83042:CDS | 45.0% | |
| GAGATTCCCCTGATAAGCAA+TGG | + | chr1.4:17240596-17240615 | MS.gene83042:CDS | 45.0% | |
| GGTCAATACACATTGGAGAG+AGG | + | chr1.4:17240745-17240764 | MS.gene83042:CDS | 45.0% | |
| TCTTTGGCGAAAAGATGAGG+GGG | - | chr1.4:17243823-17243842 | None:intergenic | 45.0% | |
| TGCAAAGACTGTGTGTGCAT+TGG | - | chr1.4:17243698-17243717 | None:intergenic | 45.0% | |
| TGGAAGAAAGTTTCAGTCGC+AGG | + | chr1.4:17244430-17244449 | MS.gene83042:CDS | 45.0% | |
| TGGGCAGAATCATACTCCAT+TGG | - | chr1.4:17242839-17242858 | None:intergenic | 45.0% | |
| TGTTCCGGAAGTGATCTAGA+CGG | + | chr1.4:17242758-17242777 | MS.gene83042:CDS | 45.0% | |
| TTCAAAACACGAACATCGCC+CGG | - | chr1.4:17242275-17242294 | None:intergenic | 45.0% | |
| TTGTGTTCGATGTCTGTGTC+AGG | + | chr1.4:17243336-17243355 | MS.gene83042:intron | 45.0% | |
| ! | AGCTAAGGCACATGAGGTTT+TGG | + | chr1.4:17241947-17241966 | MS.gene83042:CDS | 45.0% |
| ! | AGCTATTTCACAAGGCTCGA+TGG | - | chr1.4:17239847-17239866 | None:intergenic | 45.0% |
| ! | CAAGGTATTTCAACTGAGGG+TGG | + | chr1.4:17243922-17243941 | MS.gene83042:CDS | 45.0% |
| ! | CCCATCATTGCTCTTCCTTT+TGG | - | chr1.4:17242125-17242144 | None:intergenic | 45.0% |
| ! | GCCCAACACAATAAAGGTGT+TGG | + | chr1.4:17240193-17240212 | MS.gene83042:intron | 45.0% |
| ! | GCTAGACTTGGACAGTCTTT+TGG | + | chr1.4:17241492-17241511 | MS.gene83042:CDS | 45.0% |
| ! | TCAGGCTTTTCCATGAAGTC+TGG | - | chr1.4:17243850-17243869 | None:intergenic | 45.0% |
| !! | ACTTACCGCCGATTCCATAA+GGG | + | chr1.4:17241422-17241441 | MS.gene83042:CDS | 45.0% |
| !! | GTGGTACCGGTATAGATTCT+GGG | + | chr1.4:17244229-17244248 | MS.gene83042:CDS | 45.0% |
| !! | TAGAAGAATGCCGTTGGCTT+TGG | - | chr1.4:17239390-17239409 | None:intergenic | 45.0% |
| !!! | AACAAAATTTAAAATAAAAA+AGG | - | chr1.4:17239579-17239598 | None:intergenic | 5.0% |
| AAAAATCCCTGCTTGCACCC+GGG | + | chr1.4:17242254-17242273 | MS.gene83042:CDS | 50.0% | |
| AACCCAAATGCTGTGGCTAG+AGG | + | chr1.4:17240232-17240251 | MS.gene83042:intron | 50.0% | |
| ACCTAAGAGCTGCACTCTTG+TGG | - | chr1.4:17239995-17240014 | None:intergenic | 50.0% | |
| ACTGCATAGGCCATATCTCC+AGG | + | chr1.4:17240142-17240161 | MS.gene83042:intron | 50.0% | |
| CAATCCGGATGTTGTTCCCA+TGG | + | chr1.4:17240783-17240802 | MS.gene83042:CDS | 50.0% | |
| CAGTGACAACATCACAGACG+AGG | - | chr1.4:17241739-17241758 | None:intergenic | 50.0% | |
| CCACATCCAAACGAGTGTTC+CGG | + | chr1.4:17242743-17242762 | MS.gene83042:CDS | 50.0% | |
| CCATGTTTAACCTTCGCGTC+AGG | - | chr1.4:17241567-17241586 | None:intergenic | 50.0% | |
| CCATTCCCTTATGGAATCGG+CGG | - | chr1.4:17241430-17241449 | None:intergenic | 50.0% | |
| CCTGACGCGAAGGTTAAACA+TGG | + | chr1.4:17241564-17241583 | MS.gene83042:CDS | 50.0% | |
| CGATCTTTCAGCCATCTTGC+AGG | - | chr1.4:17241006-17241025 | None:intergenic | 50.0% | |
| CGTCTGTGATGTTGTCACTG+AGG | + | chr1.4:17241739-17241758 | MS.gene83042:CDS | 50.0% | |
| CTGAAACTCTAAGCGTCAGC+AGG | + | chr1.4:17241523-17241542 | MS.gene83042:CDS | 50.0% | |
| GAAAAATCCCTGCTTGCACC+CGG | + | chr1.4:17242253-17242272 | MS.gene83042:CDS | 50.0% | |
| GACAACATCACAGACGAGGT+TGG | - | chr1.4:17241735-17241754 | None:intergenic | 50.0% | |
| GACTGCCCAATACAACTGCA+AGG | - | chr1.4:17240643-17240662 | None:intergenic | 50.0% | |
| GATATAGTCGGTGATCGAGG+CGG | - | chr1.4:17241057-17241076 | None:intergenic | 50.0% | |
| GCAACCATGGGAACAACATC+CGG | - | chr1.4:17240790-17240809 | None:intergenic | 50.0% | |
| GCACGGATCCATTGCTTATC+AGG | - | chr1.4:17240607-17240626 | None:intergenic | 50.0% | |
| GCCATATCTCCAGGCAATGT+GGG | + | chr1.4:17240151-17240170 | MS.gene83042:intron | 50.0% | |
| GCTCGAATGCATCCTCATTC+TGG | - | chr1.4:17244409-17244428 | None:intergenic | 50.0% | |
| GGATTTAGTCCCACATTGCC+TGG | - | chr1.4:17240163-17240182 | None:intergenic | 50.0% | |
| GGCTCAGACATTGCTTTAGC+AGG | - | chr1.4:17243730-17243749 | None:intergenic | 50.0% | |
| GGGTATAACTGCTGGGATAC+CGG | - | chr1.4:17243803-17243822 | None:intergenic | 50.0% | |
| GTTCCGGAAGTGATCTAGAC+GGG | + | chr1.4:17242759-17242778 | MS.gene83042:CDS | 50.0% | |
| TCAAAACACGAACATCGCCC+GGG | - | chr1.4:17242274-17242293 | None:intergenic | 50.0% | |
| TCACTTCCGGAACACTCGTT+TGG | - | chr1.4:17242752-17242771 | None:intergenic | 50.0% | |
| TCCCACATTGCCTGGAGATA+TGG | - | chr1.4:17240155-17240174 | None:intergenic | 50.0% | |
| TCTAGCCACAGCATTTGGGT+TGG | - | chr1.4:17240233-17240252 | None:intergenic | 50.0% | |
| TCTTGAACTTGCCAGGAGAG+TGG | + | chr1.4:17241629-17241648 | MS.gene83042:CDS | 50.0% | |
| TGAAGCCAACCCAAATGCTG+TGG | + | chr1.4:17240225-17240244 | MS.gene83042:intron | 50.0% | |
| TGCCATCCGCGTTTCAGATT+CGG | + | chr1.4:17241676-17241695 | MS.gene83042:CDS | 50.0% | |
| TGGAGATATGGCCTATGCAG+TGG | - | chr1.4:17240143-17240162 | None:intergenic | 50.0% | |
| TGGTTCATTGACGGTGGTAC+CGG | + | chr1.4:17244216-17244235 | MS.gene83042:CDS | 50.0% | |
| TGGTTTAATGGTGCAGGAGG+TGG | + | chr1.4:17243624-17243643 | MS.gene83042:intron | 50.0% | |
| TTCCGGAAGTGATCTAGACG+GGG | + | chr1.4:17242760-17242779 | MS.gene83042:CDS | 50.0% | |
| TTGTGTTGGGCATGAAGGAG+TGG | - | chr1.4:17240184-17240203 | None:intergenic | 50.0% | |
| TTTAATGGTGCAGGAGGTGG+AGG | + | chr1.4:17243627-17243646 | MS.gene83042:intron | 50.0% | |
| ! | AGATGAGGGGGTATAACTGC+TGG | - | chr1.4:17243811-17243830 | None:intergenic | 50.0% |
| ! | AGGAGTTGGTTCATTGACGG+TGG | + | chr1.4:17244210-17244229 | MS.gene83042:CDS | 50.0% |
| ! | CGTTTCAGATTCGGTATGGC+GGG | + | chr1.4:17241685-17241704 | MS.gene83042:CDS | 50.0% |
| ! | GATGAGGGGGTATAACTGCT+GGG | - | chr1.4:17243810-17243829 | None:intergenic | 50.0% |
| ! | GCCATACCGAATCTGAAACG+CGG | - | chr1.4:17241685-17241704 | None:intergenic | 50.0% |
| ! | GCGAGGAGTTGGTTCATTGA+CGG | + | chr1.4:17244207-17244226 | MS.gene83042:CDS | 50.0% |
| ! | GCGTTTCAGATTCGGTATGG+CGG | + | chr1.4:17241684-17241703 | MS.gene83042:CDS | 50.0% |
| ! | TACCGAATCTGAAACGCGGA+TGG | - | chr1.4:17241681-17241700 | None:intergenic | 50.0% |
| ! | TCCACAAGAGTGCAGCTCTT+AGG | + | chr1.4:17239991-17240010 | MS.gene83042:intron | 50.0% |
| ! | TCCGCGTTTCAGATTCGGTA+TGG | + | chr1.4:17241681-17241700 | MS.gene83042:CDS | 50.0% |
| !! | ACGGGTTGGTATATGTTCGC+AGG | + | chr1.4:17241085-17241104 | MS.gene83042:CDS | 50.0% |
| !! | ATTCGGTATGGCGGGTACAA+AGG | + | chr1.4:17241693-17241712 | MS.gene83042:CDS | 50.0% |
| !! | CGGGTTGGTATATGTTCGCA+GGG | + | chr1.4:17241086-17241105 | MS.gene83042:CDS | 50.0% |
| !! | GACTTACCGCCGATTCCATA+AGG | + | chr1.4:17241421-17241440 | MS.gene83042:CDS | 50.0% |
| !! | GAGGCGGATTATTTGCACTG+AGG | - | chr1.4:17241041-17241060 | None:intergenic | 50.0% |
| !! | GGTGGTACCGGTATAGATTC+TGG | + | chr1.4:17244228-17244247 | MS.gene83042:CDS | 50.0% |
| !!! | ACTGCTGGGATACCGGTTTT+TGG | - | chr1.4:17243796-17243815 | None:intergenic | 50.0% |
| AACTCCTCGCCTCTTTCCGT+AGG | - | chr1.4:17244197-17244216 | None:intergenic | 55.0% | |
| AAGACAGCCGTGCTGAACCA+AGG | - | chr1.4:17240863-17240882 | None:intergenic | 55.0% | |
| ACACTCGTTTGGATGTGGCC+TGG | - | chr1.4:17242741-17242760 | None:intergenic | 55.0% | |
| ACTCCTCGCCTCTTTCCGTA+GGG | - | chr1.4:17244196-17244215 | None:intergenic | 55.0% | |
| CCAAATGCTGTGGCTAGAGG+CGG | + | chr1.4:17240235-17240254 | MS.gene83042:intron | 55.0% | |
| CCGGAACACTCGTTTGGATG+TGG | - | chr1.4:17242746-17242765 | None:intergenic | 55.0% | |
| CCTTGAGGAGGAGCAACCAT+GGG | - | chr1.4:17240802-17240821 | None:intergenic | 55.0% | |
| CGCCTCTAGCCACAGCATTT+GGG | - | chr1.4:17240237-17240256 | None:intergenic | 55.0% | |
| CTATGGCTGTGAGGTCCCTA+CGG | + | chr1.4:17244178-17244197 | MS.gene83042:CDS | 55.0% | |
| GGCCATATCTCCAGGCAATG+TGG | + | chr1.4:17240150-17240169 | MS.gene83042:intron | 55.0% | |
| GTCCCCGTCTAGATCACTTC+CGG | - | chr1.4:17242765-17242784 | None:intergenic | 55.0% | |
| GTGCAAAGCTGGCACATCCA+AGG | - | chr1.4:17242300-17242319 | None:intergenic | 55.0% | |
| GTTCAGCACGGCTGTCTTTC+AGG | + | chr1.4:17240865-17240884 | MS.gene83042:CDS | 55.0% | |
| TACGGAAAGAGGCGAGGAGT+TGG | + | chr1.4:17244196-17244215 | MS.gene83042:CDS | 55.0% | |
| TCCACCATGTGGTGCAAAGC+TGG | - | chr1.4:17242311-17242330 | None:intergenic | 55.0% | |
| TCCTTGAGGAGGAGCAACCA+TGG | - | chr1.4:17240803-17240822 | None:intergenic | 55.0% | |
| TGTGAGGTCCCTACGGAAAG+AGG | + | chr1.4:17244185-17244204 | MS.gene83042:CDS | 55.0% | |
| TGTGCCAGCTTTGCACCACA+TGG | + | chr1.4:17242304-17242323 | MS.gene83042:CDS | 55.0% | |
| ! | TGGCGGGTACAAAGGAGTTG+TGG | + | chr1.4:17241701-17241720 | MS.gene83042:CDS | 55.0% |
| !! | CCGCCGATTCCATAAGGGAA+TGG | + | chr1.4:17241427-17241446 | MS.gene83042:CDS | 55.0% |
| ATCCTCCACGTGCACGGTTG+CGG | + | chr1.4:17239813-17239832 | MS.gene83042:intron | 60.0% | |
| CCCATGGTTGCTCCTCCTCA+AGG | + | chr1.4:17240799-17240818 | MS.gene83042:CDS | 60.0% | |
| CCGCCTCTAGCCACAGCATT+TGG | - | chr1.4:17240238-17240257 | None:intergenic | 60.0% | |
| GCCAGCTTTGCACCACATGG+TGG | + | chr1.4:17242307-17242326 | MS.gene83042:CDS | 60.0% | |
| AACATCGCCCGGGTGCAAGC+AGG | - | chr1.4:17242264-17242283 | None:intergenic | 65.0% | |
| ACATCGCCCGGGTGCAAGCA+GGG | - | chr1.4:17242263-17242282 | None:intergenic | 65.0% | |
| AGTCTCCGCAACCGTGCACG+TGG | - | chr1.4:17239821-17239840 | None:intergenic | 65.0% | |
| CCGGGTATCCTCCACGTGCA+CGG | + | chr1.4:17239807-17239826 | MS.gene83042:intron | 65.0% | |
| CCGTGCACGTGGAGGATACC+CGG | - | chr1.4:17239810-17239829 | None:intergenic | 65.0% | |
| GGTCCCTACGGAAAGAGGCG+AGG | + | chr1.4:17244190-17244209 | MS.gene83042:CDS | 65.0% | |
| GTGGCTAGAGGCGGACCACA+AGG | + | chr1.4:17240244-17240263 | MS.gene83042:intron | 65.0% | |
| CTCCGCAACCGTGCACGTGG+AGG | - | chr1.4:17239818-17239837 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 17239363 | 17244467 | 17239363 | ID=MS.gene83042 |
| chr1.4 | mRNA | 17239363 | 17244467 | 17239363 | ID=MS.gene83042.t1;Parent=MS.gene83042 |
| chr1.4 | exon | 17239363 | 17239494 | 17239363 | ID=MS.gene83042.t1.exon1;Parent=MS.gene83042.t1 |
| chr1.4 | CDS | 17239363 | 17239494 | 17239363 | ID=cds.MS.gene83042.t1;Parent=MS.gene83042.t1 |
| chr1.4 | exon | 17240514 | 17242360 | 17240514 | ID=MS.gene83042.t1.exon2;Parent=MS.gene83042.t1 |
| chr1.4 | CDS | 17240514 | 17242360 | 17240514 | ID=cds.MS.gene83042.t1;Parent=MS.gene83042.t1 |
| chr1.4 | exon | 17242742 | 17242892 | 17242742 | ID=MS.gene83042.t1.exon3;Parent=MS.gene83042.t1 |
| chr1.4 | CDS | 17242742 | 17242892 | 17242742 | ID=cds.MS.gene83042.t1;Parent=MS.gene83042.t1 |
| chr1.4 | exon | 17243640 | 17244467 | 17243640 | ID=MS.gene83042.t1.exon4;Parent=MS.gene83042.t1 |
| chr1.4 | CDS | 17243640 | 17244467 | 17243640 | ID=cds.MS.gene83042.t1;Parent=MS.gene83042.t1 |
| Gene Sequence |
| Protein sequence |
