Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83395.t1 | XP_003629017.2 | 98 | 979 | 19 | 1 | 1 | 979 | 1 | 978 | 0.00E+00 | 1832.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83395.t1 | Q8L7A9 | 70.6 | 981 | 243 | 11 | 1 | 979 | 1 | 938 | 0.0e+00 | 1278.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83395.t1 | G7L7U1 | 98.0 | 979 | 19 | 1 | 1 | 979 | 1 | 978 | 0.0e+00 | 1832.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031180 | MS.gene83395 | PPI |
| MS.gene32794 | MS.gene83395 | PPI |
| MS.gene40593 | MS.gene83395 | PPI |
| MS.gene014683 | MS.gene83395 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83395.t1 | MTR_8g072250 | 97.957 | 979 | 19 | 1 | 1 | 979 | 1 | 978 | 0.0 | 1963 |
| MS.gene83395.t1 | MTR_5g034780 | 25.340 | 588 | 413 | 9 | 19 | 594 | 4 | 577 | 3.35e-59 | 219 |
| MS.gene83395.t1 | MTR_8g063690 | 24.497 | 596 | 408 | 9 | 19 | 594 | 4 | 577 | 4.42e-53 | 200 |
| MS.gene83395.t1 | MTR_2g084610 | 24.191 | 587 | 404 | 15 | 28 | 592 | 12 | 579 | 2.85e-52 | 199 |
| MS.gene83395.t1 | MTR_8g104380 | 26.371 | 383 | 257 | 7 | 27 | 407 | 20 | 379 | 1.22e-22 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83395.t1 | AT1G31730 | 70.133 | 981 | 248 | 13 | 1 | 979 | 1 | 938 | 0.0 | 1345 |
| MS.gene83395.t1 | AT1G60070 | 26.936 | 594 | 394 | 9 | 19 | 593 | 4 | 576 | 7.82e-64 | 233 |
| MS.gene83395.t1 | AT1G60070 | 26.936 | 594 | 394 | 9 | 19 | 593 | 4 | 576 | 2.14e-63 | 232 |
| MS.gene83395.t1 | AT1G23900 | 24.535 | 591 | 412 | 7 | 19 | 593 | 4 | 576 | 1.94e-55 | 208 |
| MS.gene83395.t1 | AT1G23900 | 24.535 | 591 | 412 | 7 | 19 | 593 | 4 | 576 | 1.94e-55 | 208 |
| MS.gene83395.t1 | AT1G23900 | 24.570 | 582 | 405 | 8 | 28 | 593 | 1 | 564 | 2.86e-54 | 204 |
| MS.gene83395.t1 | AT5G22770 | 26.522 | 460 | 315 | 10 | 65 | 511 | 48 | 497 | 6.92e-52 | 198 |
| MS.gene83395.t1 | AT5G22770 | 26.522 | 460 | 315 | 10 | 65 | 511 | 48 | 497 | 6.92e-52 | 198 |
| MS.gene83395.t1 | AT5G22770 | 26.522 | 460 | 315 | 10 | 65 | 511 | 48 | 497 | 6.92e-52 | 198 |
| MS.gene83395.t1 | AT5G22770 | 26.522 | 460 | 315 | 10 | 65 | 511 | 48 | 497 | 6.92e-52 | 198 |
| MS.gene83395.t1 | AT5G22770 | 26.522 | 460 | 315 | 10 | 65 | 511 | 48 | 497 | 6.92e-52 | 198 |
| MS.gene83395.t1 | AT5G22770 | 26.522 | 460 | 315 | 10 | 65 | 511 | 48 | 497 | 6.92e-52 | 198 |
| MS.gene83395.t1 | AT5G22780 | 25.321 | 545 | 367 | 14 | 65 | 588 | 48 | 573 | 9.93e-52 | 197 |
| MS.gene83395.t1 | AT5G22780 | 25.321 | 545 | 367 | 14 | 65 | 588 | 48 | 573 | 9.93e-52 | 197 |
| MS.gene83395.t1 | AT1G48760 | 25.257 | 487 | 310 | 13 | 41 | 510 | 31 | 480 | 2.95e-25 | 113 |
| MS.gene83395.t1 | AT1G48760 | 25.257 | 487 | 310 | 13 | 41 | 510 | 31 | 480 | 2.95e-25 | 113 |
| MS.gene83395.t1 | AT1G48760 | 25.257 | 487 | 310 | 13 | 41 | 510 | 31 | 480 | 2.95e-25 | 113 |
| MS.gene83395.t1 | AT1G23935 | 24.422 | 303 | 213 | 5 | 7 | 305 | 853 | 1143 | 2.15e-13 | 75.5 |
| MS.gene83395.t1 | AT1G23935 | 24.422 | 303 | 213 | 5 | 7 | 305 | 852 | 1142 | 2.30e-13 | 75.1 |
| MS.gene83395.t1 | AT1G23935 | 24.422 | 303 | 213 | 5 | 7 | 305 | 903 | 1193 | 2.36e-13 | 75.1 |
Find 232 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCCATTCACTGGATTT+TGG | 0.134245 | 8.4:+31986118 | None:intergenic |
| TACAAATGCACCTGATATTA+TGG | 0.160773 | 8.4:-31985704 | MS.gene83395:CDS |
| GCTCTCCTCGGATGCTTTAA+TGG | 0.203506 | 8.4:+31985876 | None:intergenic |
| TATGAATTACAAGCTGTTAT+TGG | 0.204151 | 8.4:-31987786 | MS.gene83395:CDS |
| AGGTTATTTGTTGGGTTCTT+GGG | 0.216014 | 8.4:-31991621 | MS.gene83395:CDS |
| CCGTTATTGGCGATATAATT+AGG | 0.223296 | 8.4:-31994075 | MS.gene83395:CDS |
| CAGGTTATTTGTTGGGTTCT+TGG | 0.225264 | 8.4:-31991622 | MS.gene83395:CDS |
| GAACACATGTACACCGTTAT+TGG | 0.232178 | 8.4:-31994088 | MS.gene83395:CDS |
| GTCCAGATTCTTGCTGATCT+TGG | 0.234688 | 8.4:+31986403 | None:intergenic |
| TGTTGGGTTCTTGGGGAATA+TGG | 0.245639 | 8.4:-31991613 | MS.gene83395:CDS |
| ACTCTTTCATCTTCCGTTTA+GGG | 0.247975 | 8.4:+31995941 | None:intergenic |
| CAAACTGCAGTGTCAATCTT+TGG | 0.260684 | 8.4:-31987856 | MS.gene83395:intron |
| CAACTTGGGATTGGGATATA+TGG | 0.275024 | 8.4:+31993988 | None:intergenic |
| TGCTAATGCTAAAGATTCTT+TGG | 0.275970 | 8.4:-31985527 | MS.gene83395:CDS |
| TACTCTTTCATCTTCCGTTT+AGG | 0.276919 | 8.4:+31995940 | None:intergenic |
| ATCTTCCGTTTAGGGATATC+TGG | 0.279722 | 8.4:+31995949 | None:intergenic |
| CTCGGTCACGACGCTTCTTT+CGG | 0.282371 | 8.4:-31995889 | MS.gene83395:CDS |
| CGATGATCCGAGTCCGTATA+AGG | 0.306731 | 8.4:-31995455 | MS.gene83395:CDS |
| TGCCGTCATTGACTGCTTAG+AGG | 0.309383 | 8.4:-31993720 | MS.gene83395:intron |
| GATTCGGTCTTCTTCGGCTT+TGG | 0.319752 | 8.4:+31996014 | None:intergenic |
| AAGCTTGCCGCTTCATTGTT+TGG | 0.324600 | 8.4:-31986003 | MS.gene83395:CDS |
| GAGTCATATTTGCGCATTAT+TGG | 0.327916 | 8.4:-31991770 | MS.gene83395:CDS |
| GGATATCTGGTTCGGAGATT+CGG | 0.335176 | 8.4:+31995962 | None:intergenic |
| CTCTCCTCGGATGCTTTAAT+GGG | 0.339900 | 8.4:+31985877 | None:intergenic |
| CACTGGGAAGTTATGCGATA+TGG | 0.347901 | 8.4:-31991557 | MS.gene83395:CDS |
| CTAGTTGATGTTCTTCTCTC+AGG | 0.348573 | 8.4:+31985967 | None:intergenic |
| CGGTTGATTGCAGAAGGATT+TGG | 0.350957 | 8.4:-31991936 | MS.gene83395:CDS |
| CTGATTACAGGTTATTTGTT+GGG | 0.351601 | 8.4:-31991629 | MS.gene83395:intron |
| CGCAGCAGCTTCTAACAACT+TGG | 0.351640 | 8.4:+31993973 | None:intergenic |
| GCAGCACCAACATTAGCTTT+TGG | 0.353994 | 8.4:+31985934 | None:intergenic |
| TCCACAAGATTTGCTTGACT+TGG | 0.356959 | 8.4:-31985836 | MS.gene83395:CDS |
| AGCCAAGATCAGCAAGAATC+TGG | 0.360813 | 8.4:-31986405 | MS.gene83395:CDS |
| GCTTCCATCAGTGTTTCTTC+AGG | 0.362276 | 8.4:-31991738 | MS.gene83395:intron |
| TGTGGAGGAGATTGTTGATT+GGG | 0.370225 | 8.4:+31985853 | None:intergenic |
| TGATAATGATCCTGGTGTTA+TGG | 0.371274 | 8.4:-31995512 | MS.gene83395:CDS |
| TTTGATGGCACAGGAGCCTT+TGG | 0.375463 | 8.4:+31986348 | None:intergenic |
| TGGAGATCTTGTGAATATTA+AGG | 0.376401 | 8.4:-31991976 | MS.gene83395:CDS |
| TACCTCAATGTCTTCGCAAC+TGG | 0.388904 | 8.4:+31987722 | None:intergenic |
| GCTGATTACAGGTTATTTGT+TGG | 0.389807 | 8.4:-31991630 | MS.gene83395:intron |
| GATTACGATTCGGTCTTCTT+CGG | 0.392121 | 8.4:+31996008 | None:intergenic |
| ATTCACCGATTGATTTGATT+AGG | 0.392413 | 8.4:+31996043 | None:intergenic |
| TGGTGATAATCATAGCTCTT+AGG | 0.393881 | 8.4:+31995379 | None:intergenic |
| CTGAAAATTCTTGCATTGTT+GGG | 0.395186 | 8.4:-31994133 | MS.gene83395:CDS |
| CACTTCCACATTGGAAGACT+TGG | 0.396065 | 8.4:+31992242 | None:intergenic |
| GCATAACTTCCCAGTGATAT+AGG | 0.398047 | 8.4:+31991564 | None:intergenic |
| TCATCAGATACAGGATCATC+AGG | 0.400967 | 8.4:-31986228 | MS.gene83395:CDS |
| ACCTTTGTCATGCCATTCAC+TGG | 0.403390 | 8.4:+31986111 | None:intergenic |
| ATTACAAGCTGTTATTGGTT+TGG | 0.405372 | 8.4:-31987781 | MS.gene83395:CDS |
| TTCTAATGATGAAATTGTTA+AGG | 0.405378 | 8.4:-31991524 | MS.gene83395:intron |
| AGAAACACTGATGGAAGCTT+TGG | 0.407807 | 8.4:+31991743 | None:intergenic |
| GATATTATGGGACTCTATAG+TGG | 0.407931 | 8.4:-31985691 | MS.gene83395:CDS |
| CATGAATGGGTCCACGGTGG+GGG | 0.409859 | 8.4:+31985789 | None:intergenic |
| CTAACAACAAGATCCTTATA+CGG | 0.410448 | 8.4:+31995442 | None:intergenic |
| GAACGAAAGGAGCCGGCATC+TGG | 0.411704 | 8.4:+31995359 | None:intergenic |
| CAGAGTAACGGCGAGATAAC+CGG | 0.412139 | 8.4:+31995813 | None:intergenic |
| GCTTCTAACAACTTGGGATT+GGG | 0.412784 | 8.4:+31993980 | None:intergenic |
| GGGCTTAAGCTAAGGCTTGA+TGG | 0.413978 | 8.4:-31986207 | MS.gene83395:CDS |
| CTGTTATTGGTTTGGATGCA+CGG | 0.417412 | 8.4:-31987773 | MS.gene83395:CDS |
| GATAATGATCCTGGTGTTAT+GGG | 0.418077 | 8.4:-31995511 | MS.gene83395:CDS |
| GCTGAAAATTCTTGCATTGT+TGG | 0.418206 | 8.4:-31994134 | MS.gene83395:CDS |
| GTCGTGGATGATAGTGAAAC+TGG | 0.422782 | 8.4:+31986318 | None:intergenic |
| CCGTTTAGGGATATCTGGTT+CGG | 0.424087 | 8.4:+31995954 | None:intergenic |
| AGCTTCTAACAACTTGGGAT+TGG | 0.425340 | 8.4:+31993979 | None:intergenic |
| GAGTAATCATTGGTTTATAC+AGG | 0.425577 | 8.4:-31992118 | MS.gene83395:intron |
| CTATAGAGTCCCATAATATC+AGG | 0.426017 | 8.4:+31985694 | None:intergenic |
| CAGATGGGTGTGACCCCAAC+TGG | 0.430929 | 8.4:-31985484 | MS.gene83395:CDS |
| ATGGGATCACAAGGCGCGTT+CGG | 0.435386 | 8.4:-31996087 | MS.gene83395:CDS |
| GCAGCTGTCAGAGGCACAAC+GGG | 0.436109 | 8.4:-31985589 | MS.gene83395:CDS |
| AGTTGGGATTCTGTCCAGTT+GGG | 0.436391 | 8.4:+31985470 | None:intergenic |
| GATGCCGGCTCCTTTCGTTC+AGG | 0.441178 | 8.4:-31995356 | MS.gene83395:intron |
| CACACATCGAGAAGCTATAT+AGG | 0.442550 | 8.4:+31992164 | None:intergenic |
| AATTTGCACCGAGTAATCAT+TGG | 0.445556 | 8.4:-31992128 | MS.gene83395:CDS |
| TCATAGCTTTCATCGGAAAT+CGG | 0.448565 | 8.4:-31995581 | MS.gene83395:CDS |
| GACCCATTCATGCAACTAGA+AGG | 0.451396 | 8.4:-31985778 | MS.gene83395:CDS |
| ACAAATGCACCTGATATTAT+GGG | 0.455505 | 8.4:-31985703 | MS.gene83395:CDS |
| TTTCGCTTCAAAGTATCGTC+AGG | 0.463858 | 8.4:+31992291 | None:intergenic |
| GCGCTCGTTCTCTGATATGT+AGG | 0.465295 | 8.4:+31986458 | None:intergenic |
| GGGGAATATGGCACAGCTGA+TGG | 0.467637 | 8.4:-31991601 | MS.gene83395:CDS |
| AATCGTTAATACGATTCAAA+AGG | 0.468077 | 8.4:-31995758 | MS.gene83395:CDS |
| CCACAAGATTTGCTTGACTT+GGG | 0.468481 | 8.4:-31985835 | MS.gene83395:CDS |
| CCCCACTTTCTATAGCCTGC+TGG | 0.471779 | 8.4:+31986487 | None:intergenic |
| CGATTTCACGGATTACGATT+CGG | 0.471806 | 8.4:+31995998 | None:intergenic |
| TATGCGTTTGAAATAGCAGC+TGG | 0.472441 | 8.4:-31989350 | MS.gene83395:CDS |
| ACAGCATGGTCTGAGATTTG+AGG | 0.473050 | 8.4:-31986382 | MS.gene83395:CDS |
| AGTCCTTCTAGTTGCATGAA+TGG | 0.473320 | 8.4:+31985775 | None:intergenic |
| TGCATGAATGGGTCCACGGT+GGG | 0.476459 | 8.4:+31985787 | None:intergenic |
| ATATCAGAGAACGAGCGCTC+TGG | 0.477437 | 8.4:-31986453 | MS.gene83395:CDS |
| AGCAAGTCTCTGAACAAGTT+GGG | 0.478029 | 8.4:+31985454 | None:intergenic |
| GTCCTTCTAGTTGCATGAAT+GGG | 0.486983 | 8.4:+31985776 | None:intergenic |
| CCTAATTATATCGCCAATAA+CGG | 0.489566 | 8.4:+31994075 | None:intergenic |
| GCATGAATGGGTCCACGGTG+GGG | 0.492744 | 8.4:+31985788 | None:intergenic |
| GGTGATTCATCAAGTAACAT+AGG | 0.492869 | 8.4:-31994049 | MS.gene83395:CDS |
| CATTCCGCTTCCTATATCAC+TGG | 0.494068 | 8.4:-31991574 | MS.gene83395:CDS |
| GGTTATTTGTTGGGTTCTTG+GGG | 0.494517 | 8.4:-31991620 | MS.gene83395:CDS |
| ATTCTTGCATTGTTGGGAAG+TGG | 0.495732 | 8.4:-31994127 | MS.gene83395:CDS |
| TGCTAAAGATTCTTTGGAGA+AGG | 0.496576 | 8.4:-31985521 | MS.gene83395:CDS |
| ATATTATGGGACTCTATAGT+GGG | 0.499149 | 8.4:-31985690 | MS.gene83395:CDS |
| CTCGACCTAATCAAATCAAT+CGG | 0.500422 | 8.4:-31996048 | MS.gene83395:CDS |
| CTTGCCGCTTCATTGTTTGG+CGG | 0.500585 | 8.4:-31986000 | MS.gene83395:CDS |
| GTTGTTGAGCTTCTTTCGCA+TGG | 0.504811 | 8.4:-31995640 | MS.gene83395:CDS |
| ATAATCCCACTGACGTGATC+TGG | 0.505989 | 8.4:+31986250 | None:intergenic |
| CCTCAATGATTATATCCAGC+AGG | 0.506143 | 8.4:-31986502 | MS.gene83395:CDS |
| CCCTTCACAGATTGTGATAC+GGG | 0.506698 | 8.4:+31985550 | None:intergenic |
| CTTACTGTAGAACTAATGCT+TGG | 0.508595 | 8.4:+31985745 | None:intergenic |
| GTGGGATTATCATCAGATAC+AGG | 0.511328 | 8.4:-31986237 | MS.gene83395:CDS |
| CGCATGGGAAAGAAGCGGTT+AGG | 0.511994 | 8.4:-31995624 | MS.gene83395:CDS |
| TAGTCATAATCTGAAATACA+TGG | 0.515074 | 8.4:-31993804 | MS.gene83395:CDS |
| CTCAACAACTAACGGCAAAA+CGG | 0.515966 | 8.4:+31995654 | None:intergenic |
| TGGAGAAGGATGCAAAAGTC+AGG | 0.518290 | 8.4:-31985507 | MS.gene83395:CDS |
| ATGGAGCAACTGAAAACAAT+CGG | 0.518330 | 8.4:-31996123 | MS.gene83395:CDS |
| TTGTTGATTGGGGCTCTCCT+CGG | 0.520685 | 8.4:+31985864 | None:intergenic |
| AATCGGCCGCGAACTCGCCA+TGG | 0.522408 | 8.4:-31996106 | MS.gene83395:CDS |
| TTAAACAGGTAGCTGAACAT+AGG | 0.522822 | 8.4:-31995405 | MS.gene83395:CDS |
| GTGATCCCATGGCGAGTTCG+CGG | 0.523154 | 8.4:+31996100 | None:intergenic |
| TCATCGGAAATCGGCGTCGT+CGG | 0.526881 | 8.4:-31995572 | MS.gene83395:CDS |
| ATCCAGCAGGCTATAGAAAG+TGG | 0.527579 | 8.4:-31986489 | MS.gene83395:CDS |
| GAATTTGAGGATGATGATGC+TGG | 0.528495 | 8.4:+31986147 | None:intergenic |
| AAGCAAGTCTCTGAACAAGT+TGG | 0.532860 | 8.4:+31985453 | None:intergenic |
| CCGAACCAGATATCCCTAAA+CGG | 0.536714 | 8.4:-31995954 | MS.gene83395:CDS |
| TTGTGGAGGAGATTGTTGAT+TGG | 0.537074 | 8.4:+31985852 | None:intergenic |
| ACTGCCCAAAATCCAGTGAA+TGG | 0.538629 | 8.4:-31986123 | MS.gene83395:CDS |
| TATTGGCGATATAATTAGGA+AGG | 0.540723 | 8.4:-31994071 | MS.gene83395:CDS |
| CGCTCGTTCTCTGATATGTA+GGG | 0.543766 | 8.4:+31986459 | None:intergenic |
| GTGATTCATCAAGTAACATA+GGG | 0.544692 | 8.4:-31994048 | MS.gene83395:CDS |
| CTTCCCAGTGATATAGGAAG+CGG | 0.546539 | 8.4:+31991570 | None:intergenic |
| AAGTTGGGATTCTGTCCAGT+TGG | 0.548304 | 8.4:+31985469 | None:intergenic |
| ACCCTTCACAGATTGTGATA+CGG | 0.548453 | 8.4:+31985549 | None:intergenic |
| TTACTGTAGAACTAATGCTT+GGG | 0.548787 | 8.4:+31985746 | None:intergenic |
| ATGAATGGGTCCACGGTGGG+GGG | 0.550013 | 8.4:+31985790 | None:intergenic |
| TTAATGCGGTTGATTGCAGA+AGG | 0.553103 | 8.4:-31991942 | MS.gene83395:CDS |
| GATCATCAGGGCTTAAGCTA+AGG | 0.553819 | 8.4:-31986215 | MS.gene83395:CDS |
| GACTGACCTTGTTCCAGTGT+CGG | 0.553943 | 8.4:-31986298 | MS.gene83395:CDS |
| TTCATCATTAGAATATGCCT+CGG | 0.559232 | 8.4:+31991534 | None:intergenic |
| AACTTGTTCAGAGACTTGCT+TGG | 0.559297 | 8.4:-31985451 | MS.gene83395:CDS |
| GCCCGTATCACAATCTGTGA+AGG | 0.559581 | 8.4:-31985551 | MS.gene83395:CDS |
| TCTAGTGAACAGAGTGGTGG+CGG | 0.560499 | 8.4:-31985661 | MS.gene83395:CDS |
| ATCGGCCGCGAACTCGCCAT+GGG | 0.561265 | 8.4:-31996105 | MS.gene83395:CDS |
| ATCACCTGAACGAAAGGAGC+CGG | 0.561526 | 8.4:+31995352 | None:intergenic |
| TTGTTGAGCTTCTTTCGCAT+GGG | 0.561760 | 8.4:-31995639 | MS.gene83395:CDS |
| GTCAACGATCACTTCCACAT+TGG | 0.561875 | 8.4:+31992233 | None:intergenic |
| CTTCTCTACGTTGAAATGCT+CGG | 0.563060 | 8.4:-31995907 | MS.gene83395:CDS |
| TCCAGCAGGCTATAGAAAGT+GGG | 0.565415 | 8.4:-31986488 | MS.gene83395:CDS |
| CTATATAGCTTCTCGATGTG+TGG | 0.566142 | 8.4:-31992163 | MS.gene83395:CDS |
| ATAACAATCACCTGAACGAA+AGG | 0.567560 | 8.4:+31995346 | None:intergenic |
| GGATGCAAAAGTCAGGCAGA+TGG | 0.568516 | 8.4:-31985500 | MS.gene83395:CDS |
| TTGATGGTGTTCAGAAGAAG+TGG | 0.570317 | 8.4:-31986191 | MS.gene83395:CDS |
| TGGCGCTTCATAGCTTTCAT+CGG | 0.570523 | 8.4:-31995588 | MS.gene83395:CDS |
| TGGTGCTGCAGACAGACCTC+AGG | 0.571390 | 8.4:-31985920 | MS.gene83395:CDS |
| ACAACTAACGGCAAAACGGC+AGG | 0.571577 | 8.4:+31995658 | None:intergenic |
| GATGCAAAAGTCAGGCAGAT+GGG | 0.571902 | 8.4:-31985499 | MS.gene83395:CDS |
| TTGCTGCAAATCAGTGGAGT+GGG | 0.571915 | 8.4:+31987815 | None:intergenic |
| TGAGGCTTATGAAGTTCCAA+AGG | 0.572646 | 8.4:-31986364 | MS.gene83395:CDS |
| GGTTAGGAAGAAAGCGGTCA+TGG | 0.573853 | 8.4:-31995608 | MS.gene83395:CDS |
| AATAGCAGCTGGGAGGAAAG+TGG | 0.575708 | 8.4:-31989339 | MS.gene83395:CDS |
| CACTGGAACAAGGTCAGTCG+TGG | 0.576617 | 8.4:+31986302 | None:intergenic |
| GTTGGGATTCTGTCCAGTTG+GGG | 0.577231 | 8.4:+31985471 | None:intergenic |
| GTGGAGGAGATTGTTGATTG+GGG | 0.582687 | 8.4:+31985854 | None:intergenic |
| CCTGCTGGATATAATCATTG+AGG | 0.583089 | 8.4:+31986502 | None:intergenic |
| TGTATAAACCAATGATTACT+CGG | 0.587543 | 8.4:+31992120 | None:intergenic |
| GCAGCAGCTTCTAACAACTT+GGG | 0.588158 | 8.4:+31993974 | None:intergenic |
| AGATTGTGTGATAATGATCC+TGG | 0.589052 | 8.4:-31995520 | MS.gene83395:CDS |
| GAACGCGCCTTGTGATCCCA+TGG | 0.589618 | 8.4:+31996089 | None:intergenic |
| TGATGTTGTTCTGCAATAAG+CGG | 0.590067 | 8.4:+31993746 | None:intergenic |
| AATCTTCTCTCAAAGCGCAC+CGG | 0.590948 | 8.4:-31995832 | MS.gene83395:CDS |
| AGGCGCGTTCGGTCAATCAA+AGG | 0.591815 | 8.4:-31996076 | MS.gene83395:CDS |
| GTCGGACTCATTGTATGCGA+GGG | 0.592330 | 8.4:-31986280 | MS.gene83395:CDS |
| AGTACCTGAAGAAACACTGA+TGG | 0.594329 | 8.4:+31991734 | None:intergenic |
| TGTTATTGGTTTGGATGCAC+GGG | 0.595115 | 8.4:-31987772 | MS.gene83395:CDS |
| AGCTGCTGCATTTGACAACC+CGG | 0.596068 | 8.4:+31985606 | None:intergenic |
| GCATACAATGAGTCCGACAC+TGG | 0.596909 | 8.4:+31986285 | None:intergenic |
| TGATCATGTACTCAATCATA+CGG | 0.597576 | 8.4:+31992211 | None:intergenic |
| TACCTCTAAGCAGTCAATGA+CGG | 0.597831 | 8.4:+31993718 | None:intergenic |
| TGCCAGTTGCGAAGACATTG+AGG | 0.598185 | 8.4:-31987724 | MS.gene83395:intron |
| GATTGCAGAAGGATTTGGAG+AGG | 0.602461 | 8.4:-31991931 | MS.gene83395:CDS |
| TTGCATGAATGGGTCCACGG+TGG | 0.602753 | 8.4:+31985786 | None:intergenic |
| GATGCTGGAGATGAATAAGC+TGG | 0.602865 | 8.4:+31986162 | None:intergenic |
| TGAGATCGTGATCGTCGTTG+AGG | 0.604788 | 8.4:+31995788 | None:intergenic |
| AGCGCGTTGCTGCAAATCAG+TGG | 0.605784 | 8.4:+31987809 | None:intergenic |
| AGAGAACGAGCGCTCTGGAG+CGG | 0.605954 | 8.4:-31986448 | MS.gene83395:CDS |
| TGTCGGACTCATTGTATGCG+AGG | 0.606090 | 8.4:-31986281 | MS.gene83395:CDS |
| AAGGTTCCAAAAGCTAATGT+TGG | 0.606418 | 8.4:-31985940 | MS.gene83395:CDS |
| AGCAGCTGTCAGAGGCACAA+CGG | 0.606641 | 8.4:-31985590 | MS.gene83395:CDS |
| CAGCAAGAATCTGGACAGCA+TGG | 0.608062 | 8.4:-31986396 | MS.gene83395:CDS |
| GACTCACCAGATCACGTCAG+TGG | 0.610506 | 8.4:-31986256 | MS.gene83395:CDS |
| TGATGGTGTTCAGAAGAAGT+GGG | 0.611696 | 8.4:-31986190 | MS.gene83395:CDS |
| CTATGATTATCACCAGATGC+CGG | 0.613011 | 8.4:-31995371 | MS.gene83395:CDS |
| TCCAGTGAATGGCATGACAA+AGG | 0.613450 | 8.4:-31986112 | MS.gene83395:CDS |
| TATGGAAGAGACACAGCGAA+TGG | 0.616828 | 8.4:+31994006 | None:intergenic |
| ATTCCGCTTCCTATATCACT+GGG | 0.617876 | 8.4:-31991573 | MS.gene83395:CDS |
| GAACTCGCCATGGGATCACA+AGG | 0.618854 | 8.4:-31996096 | MS.gene83395:CDS |
| CCCAAGTCAAGCAAATCTTG+TGG | 0.620345 | 8.4:+31985835 | None:intergenic |
| CAAGTTGTTAGAAGCTGCTG+CGG | 0.622141 | 8.4:-31993972 | MS.gene83395:CDS |
| CCCGTATCACAATCTGTGAA+GGG | 0.622447 | 8.4:-31985550 | MS.gene83395:CDS |
| ATGCGTTTGAAATAGCAGCT+GGG | 0.623907 | 8.4:-31989349 | MS.gene83395:CDS |
| TAGTTGCATGAATGGGTCCA+CGG | 0.625443 | 8.4:+31985783 | None:intergenic |
| ACAAGATCCTTATACGGACT+CGG | 0.627246 | 8.4:+31995448 | None:intergenic |
| GTCGTTGAGGAACAGAGTAA+CGG | 0.628932 | 8.4:+31995801 | None:intergenic |
| TCAAATGCAGCAGCTGTCAG+AGG | 0.630728 | 8.4:-31985598 | MS.gene83395:CDS |
| GAAAGAAGCTCAACAACTAA+CGG | 0.631117 | 8.4:+31995646 | None:intergenic |
| ATTGGCGATATAATTAGGAA+GGG | 0.632401 | 8.4:-31994070 | MS.gene83395:CDS |
| ACTCACCAGATCACGTCAGT+GGG | 0.633090 | 8.4:-31986255 | MS.gene83395:CDS |
| GTTGCTGCAAATCAGTGGAG+TGG | 0.633925 | 8.4:+31987814 | None:intergenic |
| CGATCTCAGCTGACTATATG+CGG | 0.636229 | 8.4:+31991899 | None:intergenic |
| GAAGTTATGCGATATGGCCG+AGG | 0.636501 | 8.4:-31991551 | MS.gene83395:CDS |
| AGTCATAATCTGAAATACAT+GGG | 0.639996 | 8.4:-31993803 | MS.gene83395:CDS |
| ATGAGTCCGACACTGGAACA+AGG | 0.640091 | 8.4:+31986292 | None:intergenic |
| CGTTTGTGCTGCACTTAATG+CGG | 0.641053 | 8.4:-31995710 | MS.gene83395:CDS |
| GAAAGTGGATATGCTATCTG+AGG | 0.642288 | 8.4:-31989324 | MS.gene83395:intron |
| TCTTCGCAACTGGCATCATG+TGG | 0.645470 | 8.4:+31987732 | None:intergenic |
| ACAGATTGTGATACGGGCGA+CGG | 0.646894 | 8.4:+31985556 | None:intergenic |
| AGAACCGCCAAACAATGAAG+CGG | 0.647321 | 8.4:+31985996 | None:intergenic |
| GGCTGCTATAACTCTGCAAG+TGG | 0.649380 | 8.4:-31985640 | MS.gene83395:CDS |
| AAGAACATCAACTAGCAGCA+AGG | 0.653866 | 8.4:-31985959 | MS.gene83395:CDS |
| AGGTTGCACATAATTTAATG+CGG | 0.654401 | 8.4:-31991956 | MS.gene83395:CDS |
| TCTTTCGCATGGGAAAGAAG+CGG | 0.658045 | 8.4:-31995629 | MS.gene83395:CDS |
| AGAGTAGCACCCATAACACC+AGG | 0.658462 | 8.4:+31995502 | None:intergenic |
| CATCAGATACAGGATCATCA+GGG | 0.658760 | 8.4:-31986227 | MS.gene83395:CDS |
| AGTGAATGGCATGACAAAGG+TGG | 0.661156 | 8.4:-31986109 | MS.gene83395:CDS |
| CCAGCAGGCTATAGAAAGTG+GGG | 0.661545 | 8.4:-31986487 | MS.gene83395:CDS |
| TACATGGGTATTGATGCTCT+CGG | 0.662992 | 8.4:-31993788 | MS.gene83395:CDS |
| AAGTCAAGCAAATCTTGTGG+AGG | 0.665010 | 8.4:+31985838 | None:intergenic |
| TAAGTGCAGCACAAACGACA+AGG | 0.667985 | 8.4:+31995716 | None:intergenic |
| GTCGTCGGTTTCACATCTTG+TGG | 0.671515 | 8.4:-31995557 | MS.gene83395:CDS |
| TGTGCCCATTAAAGCATCCG+AGG | 0.672072 | 8.4:-31985881 | MS.gene83395:CDS |
| TCGCTTATAAGATCAAACAA+AGG | 0.675984 | 8.4:+31995475 | None:intergenic |
| AATGACCAAGTCTTCCAATG+TGG | 0.681347 | 8.4:-31992247 | MS.gene83395:CDS |
| ACTTCTAGTGAACAGAGTGG+TGG | 0.689546 | 8.4:-31985664 | MS.gene83395:CDS |
| GATGGTGTTCAGAAGAAGTG+GGG | 0.704018 | 8.4:-31986189 | MS.gene83395:CDS |
| CGTTTGAAATAGCAGCTGGG+AGG | 0.708061 | 8.4:-31989346 | MS.gene83395:CDS |
| TATTATGGGACTCTATAGTG+GGG | 0.715463 | 8.4:-31985689 | MS.gene83395:CDS |
| AGAAGCGGTTAGGAAGAAAG+CGG | 0.739854 | 8.4:-31995614 | MS.gene83395:CDS |
| GCTACTTCTAGTGAACAGAG+TGG | 0.788832 | 8.4:-31985667 | MS.gene83395:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 31985447 | 31996145 | 31985447 | ID=MS.gene83395 |
| chr8.4 | mRNA | 31985447 | 31996145 | 31985447 | ID=MS.gene83395.t1;Parent=MS.gene83395 |
| chr8.4 | exon | 31995357 | 31996145 | 31995357 | ID=MS.gene83395.t1.exon1;Parent=MS.gene83395.t1 |
| chr8.4 | CDS | 31995357 | 31996145 | 31995357 | ID=cds.MS.gene83395.t1;Parent=MS.gene83395.t1 |
| chr8.4 | exon | 31993949 | 31994164 | 31993949 | ID=MS.gene83395.t1.exon2;Parent=MS.gene83395.t1 |
| chr8.4 | CDS | 31993949 | 31994164 | 31993949 | ID=cds.MS.gene83395.t1;Parent=MS.gene83395.t1 |
| chr8.4 | exon | 31993721 | 31993831 | 31993721 | ID=MS.gene83395.t1.exon3;Parent=MS.gene83395.t1 |
| chr8.4 | CDS | 31993721 | 31993831 | 31993721 | ID=cds.MS.gene83395.t1;Parent=MS.gene83395.t1 |
| chr8.4 | exon | 31992119 | 31992316 | 31992119 | ID=MS.gene83395.t1.exon4;Parent=MS.gene83395.t1 |
| chr8.4 | CDS | 31992119 | 31992316 | 31992119 | ID=cds.MS.gene83395.t1;Parent=MS.gene83395.t1 |
| chr8.4 | exon | 31991893 | 31992024 | 31991893 | ID=MS.gene83395.t1.exon5;Parent=MS.gene83395.t1 |
| chr8.4 | CDS | 31991893 | 31992024 | 31991893 | ID=cds.MS.gene83395.t1;Parent=MS.gene83395.t1 |
| chr8.4 | exon | 31991739 | 31991795 | 31991739 | ID=MS.gene83395.t1.exon6;Parent=MS.gene83395.t1 |
| chr8.4 | CDS | 31991739 | 31991795 | 31991739 | ID=cds.MS.gene83395.t1;Parent=MS.gene83395.t1 |
| chr8.4 | exon | 31991525 | 31991641 | 31991525 | ID=MS.gene83395.t1.exon7;Parent=MS.gene83395.t1 |
| chr8.4 | CDS | 31991525 | 31991641 | 31991525 | ID=cds.MS.gene83395.t1;Parent=MS.gene83395.t1 |
| chr8.4 | exon | 31989325 | 31989402 | 31989325 | ID=MS.gene83395.t1.exon8;Parent=MS.gene83395.t1 |
| chr8.4 | CDS | 31989325 | 31989402 | 31989325 | ID=cds.MS.gene83395.t1;Parent=MS.gene83395.t1 |
| chr8.4 | exon | 31987725 | 31987868 | 31987725 | ID=MS.gene83395.t1.exon9;Parent=MS.gene83395.t1 |
| chr8.4 | CDS | 31987725 | 31987868 | 31987725 | ID=cds.MS.gene83395.t1;Parent=MS.gene83395.t1 |
| chr8.4 | exon | 31985447 | 31986544 | 31985447 | ID=MS.gene83395.t1.exon10;Parent=MS.gene83395.t1 |
| chr8.4 | CDS | 31985447 | 31986544 | 31985447 | ID=cds.MS.gene83395.t1;Parent=MS.gene83395.t1 |
| Gene Sequence |
| Protein sequence |
