Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84249.t1 | KEH18842.1 | 91.8 | 585 | 46 | 1 | 1 | 583 | 9 | 593 | 1.20E-280 | 975.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84249.t1 | Q84JT7 | 30.8 | 577 | 274 | 14 | 1 | 570 | 72 | 530 | 1.6e-58 | 228.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84249.t1 | A0A072TN61 | 91.8 | 585 | 46 | 1 | 1 | 583 | 9 | 593 | 8.9e-281 | 975.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene84249.t1 | TR | ARID |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene84249 | 0.831281 | 1.82E-55 | -1.69E-46 |
| MS.gene054824 | MS.gene84249 | 0.804502 | 2.09E-49 | -1.69E-46 |
| MS.gene055468 | MS.gene84249 | 0.809913 | 1.50E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene84249 | 0.813768 | 2.17E-51 | -1.69E-46 |
| MS.gene056801 | MS.gene84249 | 0.841411 | 4.83E-58 | -1.69E-46 |
| MS.gene061006 | MS.gene84249 | 0.829589 | 4.73E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene84249 | 0.809402 | 1.93E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84249.t1 | MTR_8g028905 | 92.308 | 585 | 43 | 1 | 1 | 583 | 9 | 593 | 0.0 | 1083 |
| MS.gene84249.t1 | MTR_7g078120 | 43.406 | 599 | 291 | 16 | 1 | 582 | 1 | 568 | 5.43e-142 | 424 |
| MS.gene84249.t1 | MTR_7g078120 | 43.406 | 599 | 291 | 16 | 1 | 582 | 1 | 568 | 2.82e-141 | 424 |
| MS.gene84249.t1 | MTR_8g098605 | 39.024 | 328 | 184 | 8 | 251 | 572 | 246 | 563 | 3.81e-62 | 216 |
| MS.gene84249.t1 | MTR_8g098645 | 51.445 | 173 | 82 | 2 | 400 | 572 | 143 | 313 | 6.39e-53 | 184 |
| MS.gene84249.t1 | MTR_1g073380 | 34.921 | 315 | 182 | 6 | 277 | 572 | 255 | 565 | 1.63e-50 | 184 |
| MS.gene84249.t1 | MTR_8g098635 | 35.692 | 325 | 158 | 8 | 250 | 572 | 72 | 347 | 1.92e-50 | 179 |
| MS.gene84249.t1 | MTR_8g098635 | 34.936 | 312 | 153 | 7 | 263 | 572 | 1 | 264 | 8.78e-50 | 174 |
| MS.gene84249.t1 | MTR_1g073590 | 34.936 | 312 | 174 | 9 | 277 | 572 | 254 | 552 | 1.79e-48 | 178 |
| MS.gene84249.t1 | MTR_1g073530 | 46.591 | 176 | 92 | 2 | 397 | 572 | 382 | 555 | 5.41e-46 | 171 |
| MS.gene84249.t1 | MTR_6g071350 | 36.290 | 248 | 115 | 8 | 251 | 497 | 163 | 368 | 1.68e-31 | 126 |
| MS.gene84249.t1 | MTR_7g066890 | 35.450 | 189 | 109 | 5 | 382 | 564 | 179 | 360 | 2.67e-28 | 117 |
| MS.gene84249.t1 | MTR_7g066890 | 35.450 | 189 | 109 | 5 | 382 | 564 | 281 | 462 | 3.12e-27 | 115 |
| MS.gene84249.t1 | MTR_5g048010 | 32.258 | 248 | 129 | 9 | 251 | 497 | 74 | 283 | 3.61e-22 | 97.8 |
| MS.gene84249.t1 | MTR_3g023780 | 34.615 | 182 | 104 | 6 | 400 | 570 | 149 | 326 | 4.38e-22 | 100 |
| MS.gene84249.t1 | MTR_7g066880 | 31.414 | 191 | 118 | 4 | 380 | 564 | 169 | 352 | 1.98e-20 | 93.6 |
| MS.gene84249.t1 | MTR_0259s0060 | 29.213 | 178 | 77 | 4 | 395 | 572 | 11 | 139 | 1.64e-16 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84249.t1 | AT2G46040 | 40.248 | 323 | 152 | 9 | 253 | 570 | 244 | 530 | 1.84e-65 | 224 |
| MS.gene84249.t1 | AT2G46040 | 40.248 | 323 | 152 | 9 | 253 | 570 | 244 | 530 | 1.84e-65 | 224 |
| MS.gene84249.t1 | AT2G46040 | 40.248 | 323 | 152 | 9 | 253 | 570 | 258 | 544 | 2.11e-65 | 224 |
| MS.gene84249.t1 | AT4G11400 | 34.694 | 343 | 184 | 8 | 263 | 581 | 225 | 551 | 1.46e-54 | 194 |
| MS.gene84249.t1 | AT4G11400 | 34.694 | 343 | 184 | 8 | 263 | 581 | 225 | 551 | 1.46e-54 | 194 |
| MS.gene84249.t1 | AT5G04110 | 37.805 | 164 | 88 | 5 | 400 | 552 | 362 | 522 | 1.11e-27 | 117 |
| MS.gene84249.t1 | AT5G04110 | 37.805 | 164 | 88 | 5 | 400 | 552 | 361 | 521 | 1.17e-27 | 117 |
| MS.gene84249.t1 | AT5G04110 | 37.805 | 164 | 88 | 5 | 400 | 552 | 361 | 521 | 1.17e-27 | 117 |
| MS.gene84249.t1 | AT5G04110 | 36.054 | 147 | 80 | 5 | 400 | 535 | 361 | 504 | 5.33e-20 | 94.0 |
| MS.gene84249.t1 | AT1G26580 | 32.642 | 193 | 109 | 6 | 396 | 570 | 65 | 254 | 1.21e-19 | 92.0 |
| MS.gene84249.t1 | AT1G26580 | 32.642 | 193 | 109 | 6 | 396 | 570 | 131 | 320 | 1.73e-19 | 92.4 |
| MS.gene84249.t1 | AT1G26580 | 32.642 | 193 | 109 | 6 | 396 | 570 | 131 | 320 | 1.73e-19 | 92.4 |
| MS.gene84249.t1 | AT2G03470 | 32.240 | 183 | 105 | 6 | 399 | 570 | 121 | 295 | 1.14e-17 | 86.3 |
| MS.gene84249.t1 | AT2G03470 | 32.240 | 183 | 105 | 6 | 399 | 570 | 122 | 296 | 1.19e-17 | 86.3 |
| MS.gene84249.t1 | AT1G13880 | 29.843 | 191 | 112 | 7 | 402 | 579 | 131 | 312 | 2.74e-16 | 82.0 |
| MS.gene84249.t1 | AT1G13880 | 29.843 | 191 | 112 | 7 | 402 | 579 | 130 | 311 | 2.80e-16 | 81.6 |
| MS.gene84249.t1 | AT1G13880 | 29.843 | 191 | 112 | 7 | 402 | 579 | 140 | 321 | 2.94e-16 | 82.0 |
Find 176 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCACTTAGTATCGCTTTC+AGG | 0.202455 | 8.3:-64457763 | None:intergenic |
| TCAGGCATCGGAACAATTTC+AGG | 0.206652 | 8.3:-64456187 | None:intergenic |
| AGAGAGGATATGAACATTTC+TGG | 0.214678 | 8.3:+64458064 | MS.gene84249:CDS |
| GTCTGGTTTGATGGGGTTTA+AGG | 0.229952 | 8.3:+64455583 | MS.gene84249:CDS |
| CTCCGACAATCTACAATCTT+AGG | 0.256515 | 8.3:+64457512 | MS.gene84249:CDS |
| GACGATCAAGTTATAGTAGA+TGG | 0.274070 | 8.3:+64457674 | MS.gene84249:CDS |
| TATGGTATGCTTTGCGTTGC+AGG | 0.283050 | 8.3:-64458158 | None:intergenic |
| CGAGCATTGAACAGCAAAAT+TGG | 0.292781 | 8.3:+64456296 | MS.gene84249:CDS |
| GTGAGTTGTGGGATTTGGTT+GGG | 0.298315 | 8.3:+64455444 | MS.gene84249:CDS |
| TGATGGTGAGTTGTGGGATT+TGG | 0.308604 | 8.3:+64455439 | MS.gene84249:CDS |
| AAATGTTCATATCCTCTCTT+TGG | 0.311222 | 8.3:-64458060 | None:intergenic |
| TGATAATATTGTTCCGGTAT+TGG | 0.317593 | 8.3:+64456057 | MS.gene84249:CDS |
| AAAGTTTCCCTGCTCTTGTT+AGG | 0.326065 | 8.3:-64458108 | None:intergenic |
| CGTTGGTTCGACGCTGAAAC+TGG | 0.334461 | 8.3:+64455490 | MS.gene84249:CDS |
| GATGTAGGATTTCTTGATTC+CGG | 0.342697 | 8.3:+64455839 | MS.gene84249:CDS |
| TGTGCTAGGCGAAGGAGATT+TGG | 0.343980 | 8.3:+64457606 | MS.gene84249:CDS |
| AAGGTTAAGGGTGGAGTTGA+TGG | 0.350428 | 8.3:+64455761 | MS.gene84249:CDS |
| GTTTGATGAGTCTGGTTTGA+TGG | 0.354024 | 8.3:+64455574 | MS.gene84249:CDS |
| TTAGTATCGCTTTCAGGATT+CGG | 0.361285 | 8.3:-64457757 | None:intergenic |
| GGTGAGTTGTGGGATTTGGT+TGG | 0.366075 | 8.3:+64455443 | MS.gene84249:CDS |
| CAGGGTGGGAATGTGGTGGC+TGG | 0.374383 | 8.3:+64455632 | MS.gene84249:CDS |
| ATGAAGACGAGAAAAGGTTC+AGG | 0.374801 | 8.3:+64458016 | MS.gene84249:CDS |
| GTTGGGGAAGAATGTGGCTT+AGG | 0.382436 | 8.3:+64455461 | MS.gene84249:CDS |
| CATCCCTCGGTTCATCATTC+CGG | 0.387863 | 8.3:-64455858 | None:intergenic |
| AGTGGTTTGGGACCCAAGTA+TGG | 0.390417 | 8.3:+64457779 | MS.gene84249:CDS |
| GCTAAGGTGTTTGATGAGTC+TGG | 0.404181 | 8.3:+64455566 | MS.gene84249:CDS |
| GAAAGCGATACTAAGTGGTT+TGG | 0.405886 | 8.3:+64457766 | MS.gene84249:CDS |
| TTTGATGAGTCTGGTTTGAT+GGG | 0.408271 | 8.3:+64455575 | MS.gene84249:CDS |
| CTTGACGAGCTTCGTGAAGA+TGG | 0.408980 | 8.3:-64457577 | None:intergenic |
| TCCCTAAGATTGTAGATTGT+CGG | 0.412515 | 8.3:-64457514 | None:intergenic |
| CACGGTGGGAATGTGGTAAC+TGG | 0.413124 | 8.3:+64455734 | MS.gene84249:CDS |
| AACTGAGGATGCGTCTGATT+TGG | 0.415902 | 8.3:+64455976 | MS.gene84249:CDS |
| GAATGAGTTGTTGTCGGGTC+AGG | 0.421751 | 8.3:+64455613 | MS.gene84249:CDS |
| TCATGCGGCTGCGCAGTTCC+AGG | 0.424066 | 8.3:+64457868 | MS.gene84249:CDS |
| TTCTCAATTTCTTGTCGAAA+GGG | 0.425727 | 8.3:+64457819 | MS.gene84249:CDS |
| TTACCATTGGCGTTTCGATA+AGG | 0.427484 | 8.3:+64457963 | MS.gene84249:CDS |
| TGTTTGTGATGGTGAGTTGT+GGG | 0.431433 | 8.3:+64455433 | MS.gene84249:CDS |
| TCCTGTCTTCCCCTTCCTAT+AGG | 0.432461 | 8.3:-64457844 | None:intergenic |
| TCCTATAGGAAGGGGAAGAC+AGG | 0.433625 | 8.3:+64457843 | MS.gene84249:CDS |
| AAAGCGATACTAAGTGGTTT+GGG | 0.433827 | 8.3:+64457767 | MS.gene84249:CDS |
| TTGGTGAAGAGCGGTGAGTC+TGG | 0.434679 | 8.3:+64455995 | MS.gene84249:CDS |
| ATACAGCCAATGGCCATACT+TGG | 0.437133 | 8.3:-64457792 | None:intergenic |
| AAACATTTCCTAACAAGAGC+AGG | 0.439152 | 8.3:+64458100 | MS.gene84249:CDS |
| GTGGAGGGCTTACAGTAATC+AGG | 0.440528 | 8.3:+64456219 | MS.gene84249:CDS |
| TGAGTTGTGGGATTTGGTTG+GGG | 0.451450 | 8.3:+64455445 | MS.gene84249:CDS |
| CTCTGTTTGATATGATGAGT+TGG | 0.453588 | 8.3:+64456134 | MS.gene84249:CDS |
| TTTGATGGGGTTTAAGGCTG+AGG | 0.456932 | 8.3:+64455589 | MS.gene84249:CDS |
| GTGAAGATGTTCGGAATTCG+TGG | 0.464902 | 8.3:+64457989 | MS.gene84249:CDS |
| TTGGATTTGTCTGGTGGAGA+TGG | 0.466252 | 8.3:+64456076 | MS.gene84249:CDS |
| GGTGGCTGGAGAGAAGGTTA+AGG | 0.466762 | 8.3:+64455646 | MS.gene84249:CDS |
| TATCGGTGATAATATTGTTC+CGG | 0.468339 | 8.3:+64456051 | MS.gene84249:CDS |
| GGTAACTGGAGAGAAGGTTA+AGG | 0.476059 | 8.3:+64455748 | MS.gene84249:CDS |
| GAGAGGATATGAACATTTCT+GGG | 0.477135 | 8.3:+64458065 | MS.gene84249:CDS |
| ATTCTCAATTTCTTGTCGAA+AGG | 0.481791 | 8.3:+64457818 | MS.gene84249:CDS |
| GTGGCTGGAGAGAAGGTTAA+GGG | 0.482398 | 8.3:+64455647 | MS.gene84249:CDS |
| GTTCCGGTATTGGATTTGTC+TGG | 0.486514 | 8.3:+64456067 | MS.gene84249:CDS |
| GGACAGATGAAGACGAGAAA+AGG | 0.486764 | 8.3:+64458010 | MS.gene84249:CDS |
| CTGACACATTCAACAGAACC+TGG | 0.487585 | 8.3:-64457886 | None:intergenic |
| GCATCAGCTCGCATCTGCGT+GGG | 0.488125 | 8.3:+64457697 | MS.gene84249:CDS |
| ATTGTTGTTGACGGGAAAGG+TGG | 0.490249 | 8.3:+64455401 | MS.gene84249:CDS |
| GAGTCTGGTGGGGTGAAAGA+AGG | 0.490304 | 8.3:+64455812 | MS.gene84249:CDS |
| AACGCAAAGCATACCATAGC+AGG | 0.490321 | 8.3:+64458163 | MS.gene84249:CDS |
| TGTTCATATCCTCTCTTTGG+AGG | 0.491805 | 8.3:-64458057 | None:intergenic |
| CTGTTTGTGATGGTGAGTTG+TGG | 0.494879 | 8.3:+64455432 | MS.gene84249:CDS |
| TCTGTTTGATATGATGAGTT+GGG | 0.500139 | 8.3:+64456135 | MS.gene84249:CDS |
| GAGAATCATGATGGTGATAT+CGG | 0.501429 | 8.3:+64456034 | MS.gene84249:CDS |
| GAGTCGTGTGTGATGAAAGT+TGG | 0.506590 | 8.3:+64455539 | MS.gene84249:CDS |
| GGGTTTGATGCTGTTTGTGA+TGG | 0.509454 | 8.3:+64455422 | MS.gene84249:CDS |
| TGGGACCCAAGTATGGCCAT+TGG | 0.513214 | 8.3:+64457786 | MS.gene84249:CDS |
| AGCTGTTGATTGTTGTTGAC+GGG | 0.513550 | 8.3:+64455393 | MS.gene84249:CDS |
| ATAAGGTCGGTGAAGATGTT+CGG | 0.518788 | 8.3:+64457980 | MS.gene84249:CDS |
| CAAGTCGTCGTGCTGTGAAA+CGG | 0.521739 | 8.3:+64457638 | MS.gene84249:CDS |
| GTAACTGGAGAGAAGGTTAA+GGG | 0.523633 | 8.3:+64455749 | MS.gene84249:CDS |
| GCTAAAGCTAAGCTGGAGTT+AGG | 0.528280 | 8.3:+64457931 | MS.gene84249:CDS |
| GAATGTGGTGGCTGGAGAGA+AGG | 0.530094 | 8.3:+64455640 | MS.gene84249:CDS |
| TCCGACAATCTACAATCTTA+GGG | 0.531884 | 8.3:+64457513 | MS.gene84249:CDS |
| TGAGGTGAATGAGTTGTTGT+CGG | 0.533812 | 8.3:+64455607 | MS.gene84249:CDS |
| AAGGTTAAGGGTGGAGCTGA+TGG | 0.534301 | 8.3:+64455659 | MS.gene84249:CDS |
| GAAGTGGTTCTAGTCTTAAG+AGG | 0.534929 | 8.3:+64456098 | MS.gene84249:CDS |
| TTGTCTGGTGGAGATGGAAG+TGG | 0.536182 | 8.3:+64456082 | MS.gene84249:CDS |
| CATTGAACAGCAAAATTGGC+AGG | 0.537300 | 8.3:+64456300 | MS.gene84249:CDS |
| AATGAGTTGTTGTCGGGTCA+GGG | 0.537370 | 8.3:+64455614 | MS.gene84249:CDS |
| GATTTGGTTGGGGAAGAATG+TGG | 0.539468 | 8.3:+64455455 | MS.gene84249:CDS |
| CTGAGTGAGGGTAATGGTGA+TGG | 0.540918 | 8.3:+64455905 | MS.gene84249:CDS |
| CTTACAGTAATCAGGAGGCT+TGG | 0.542653 | 8.3:+64456227 | MS.gene84249:CDS |
| TAATCAGGAGGCTTGGAAGC+GGG | 0.543149 | 8.3:+64456234 | MS.gene84249:CDS |
| GGCATCAGCTCGCATCTGCG+TGG | 0.543485 | 8.3:+64457696 | MS.gene84249:CDS |
| TGAGGGTAATGGTGATGGAA+TGG | 0.545924 | 8.3:+64455910 | MS.gene84249:CDS |
| GTGCGAATTTCGAGTCTAGT+GGG | 0.546249 | 8.3:+64455699 | MS.gene84249:CDS |
| GTGAAAGAAGGTCACGATGT+AGG | 0.547896 | 8.3:+64455824 | MS.gene84249:CDS |
| AGTTCATCTGTGCTAGGCGA+AGG | 0.552705 | 8.3:+64457598 | MS.gene84249:CDS |
| GTCGGGTCAGGGTGGGAATG+TGG | 0.553223 | 8.3:+64455625 | MS.gene84249:CDS |
| TTACTGTAAGCCCTCCACTT+TGG | 0.553928 | 8.3:-64456214 | None:intergenic |
| CTTGTCGAAAGGGATCCTAT+AGG | 0.556633 | 8.3:+64457829 | MS.gene84249:CDS |
| ACGATCAAGTTATAGTAGAT+GGG | 0.556760 | 8.3:+64457675 | MS.gene84249:CDS |
| GCTGAAGTGCCAGAGTGGAC+TGG | 0.557124 | 8.3:+64457733 | MS.gene84249:CDS |
| GCGGGTTCTGTTGTTTCGAG+AGG | 0.558329 | 8.3:+64456252 | MS.gene84249:CDS |
| TGAAGACGAGAAAAGGTTCA+GGG | 0.560005 | 8.3:+64458017 | MS.gene84249:CDS |
| TTGATTGTTGTTGACGGGAA+AGG | 0.563358 | 8.3:+64455398 | MS.gene84249:CDS |
| GATGGAGGGAAAATAACTGT+AGG | 0.564686 | 8.3:+64455950 | MS.gene84249:CDS |
| ATGGTCAGTGATACCGATGT+TGG | 0.565824 | 8.3:+64455878 | MS.gene84249:CDS |
| AAGCTGTTGATTGTTGTTGA+CGG | 0.566769 | 8.3:+64455392 | MS.gene84249:CDS |
| GAGGTGAATGAGTTGTTGTC+GGG | 0.568676 | 8.3:+64455608 | MS.gene84249:CDS |
| TCGTCAAGTTCATCTGTGCT+AGG | 0.569671 | 8.3:+64457592 | MS.gene84249:CDS |
| CAATCTACAATCTTAGGGAG+AGG | 0.570505 | 8.3:+64457518 | MS.gene84249:CDS |
| CCGGTATTGGATTTGTCTGG+TGG | 0.571572 | 8.3:+64456070 | MS.gene84249:CDS |
| CCACCAGACAAATCCAATAC+CGG | 0.573971 | 8.3:-64456070 | None:intergenic |
| GCCTGAAAAGCCAAAGTGGA+GGG | 0.574127 | 8.3:+64456204 | MS.gene84249:CDS |
| TACAGCCAATGGCCATACTT+GGG | 0.577673 | 8.3:-64457791 | None:intergenic |
| GTGGGATCATCATACATGCT+AGG | 0.577985 | 8.3:-64457490 | None:intergenic |
| TTGTTGTTGACGGGAAAGGT+GGG | 0.578023 | 8.3:+64455402 | MS.gene84249:CDS |
| ACTGGAGAGAAGGTTAAGGG+TGG | 0.579796 | 8.3:+64455752 | MS.gene84249:CDS |
| ATCTACAATCTTAGGGAGAG+GGG | 0.580993 | 8.3:+64457520 | MS.gene84249:CDS |
| AATCTACAATCTTAGGGAGA+GGG | 0.581096 | 8.3:+64457519 | MS.gene84249:CDS |
| GGAAAGCTGAGTGAGGGTAA+TGG | 0.581453 | 8.3:+64455899 | MS.gene84249:CDS |
| TACCATAGCAGGCATACACT+TGG | 0.584083 | 8.3:+64458174 | MS.gene84249:CDS |
| AACATTTCCTAACAAGAGCA+GGG | 0.584542 | 8.3:+64458101 | MS.gene84249:CDS |
| CGACCTTATCGAAACGCCAA+TGG | 0.585564 | 8.3:-64457966 | None:intergenic |
| CTCACTCAGCTTTCCAACAT+CGG | 0.585605 | 8.3:-64455891 | None:intergenic |
| ATGGAGGGAAAATAACTGTA+GGG | 0.586968 | 8.3:+64455951 | MS.gene84249:CDS |
| GTTCATATCCTCTCTTTGGA+GGG | 0.587128 | 8.3:-64458056 | None:intergenic |
| TCGAAAGGGATCCTATAGGA+AGG | 0.587509 | 8.3:+64457833 | MS.gene84249:CDS |
| CGATGCCTGAAAAGCCAAAG+TGG | 0.588222 | 8.3:+64456200 | MS.gene84249:CDS |
| TTGATGAGTCTGGTTTGATG+GGG | 0.588528 | 8.3:+64455576 | MS.gene84249:CDS |
| GGGTCAGGGTGGGAATGTGG+TGG | 0.588589 | 8.3:+64455628 | MS.gene84249:CDS |
| GAATGTGGTAACTGGAGAGA+AGG | 0.588966 | 8.3:+64455742 | MS.gene84249:CDS |
| TTTCACAGCACGACGACTTG+TGG | 0.590229 | 8.3:-64457635 | None:intergenic |
| GAAAGGGATCCTATAGGAAG+GGG | 0.590844 | 8.3:+64457835 | MS.gene84249:CDS |
| ATCCTGAAAGCGATACTAAG+TGG | 0.591141 | 8.3:+64457761 | MS.gene84249:CDS |
| CATCAGCTCGCATCTGCGTG+GGG | 0.592406 | 8.3:+64457698 | MS.gene84249:CDS |
| AGAAGTTCACGGTGGGAATG+TGG | 0.595779 | 8.3:+64455727 | MS.gene84249:CDS |
| CGAAAGGGATCCTATAGGAA+GGG | 0.595912 | 8.3:+64457834 | MS.gene84249:CDS |
| AGTTGTTGTCGGGTCAGGGT+GGG | 0.598266 | 8.3:+64455618 | MS.gene84249:CDS |
| GTAATCAGGAGGCTTGGAAG+CGG | 0.600886 | 8.3:+64456233 | MS.gene84249:CDS |
| GAGTCTGGATTGCTGAATGT+TGG | 0.602152 | 8.3:+64456010 | MS.gene84249:CDS |
| AGATTGTAGATTGTCGGAGT+GGG | 0.602178 | 8.3:-64457508 | None:intergenic |
| CACCAAGTGTATGCCTGCTA+TGG | 0.604240 | 8.3:-64458176 | None:intergenic |
| AGTGGGGAGAAAGAAGTTCA+CGG | 0.606594 | 8.3:+64455716 | MS.gene84249:CDS |
| TAGTCTTAAGAGGAAGAGAG+AGG | 0.607309 | 8.3:+64456108 | MS.gene84249:CDS |
| CATTGGCGTTTCGATAAGGT+CGG | 0.607511 | 8.3:+64457967 | MS.gene84249:CDS |
| CGGAATGATGAACCGAGGGA+TGG | 0.608406 | 8.3:+64455859 | MS.gene84249:CDS |
| CGATGTTGGAAAGCTGAGTG+AGG | 0.609819 | 8.3:+64455892 | MS.gene84249:CDS |
| CGGTATCACTGACCATCCCT+CGG | 0.610670 | 8.3:-64455871 | None:intergenic |
| TAGGCGAAGGAGATTTGGAC+GGG | 0.612279 | 8.3:+64457611 | MS.gene84249:CDS |
| AGTGCGAATTTCGAGTCTAG+TGG | 0.613148 | 8.3:+64455698 | MS.gene84249:CDS |
| AGCTAAGCTGGAGTTAGGCG+TGG | 0.617435 | 8.3:+64457936 | MS.gene84249:CDS |
| GATGAAAGTTGGTGATGCTA+AGG | 0.617892 | 8.3:+64455550 | MS.gene84249:CDS |
| GGATTCGGACCAGTCCACTC+TGG | 0.619182 | 8.3:-64457742 | None:intergenic |
| ATTCCGGAATGATGAACCGA+GGG | 0.623201 | 8.3:+64455855 | MS.gene84249:CDS |
| TGCCTGAAAAGCCAAAGTGG+AGG | 0.624771 | 8.3:+64456203 | MS.gene84249:CDS |
| GGGAGAAAGAAGTTCACGGT+GGG | 0.626167 | 8.3:+64455720 | MS.gene84249:CDS |
| CAGCTTTACCCTCCAAAGAG+AGG | 0.627360 | 8.3:+64458048 | MS.gene84249:CDS |
| GGTATGCTTTGCGTTGCAGG+AGG | 0.627987 | 8.3:-64458155 | None:intergenic |
| GGAACAATTTCAGGATCACA+AGG | 0.631056 | 8.3:-64456178 | None:intergenic |
| TCTACAATCTTAGGGAGAGG+GGG | 0.633262 | 8.3:+64457521 | MS.gene84249:CDS |
| ATCAAGCTGAAGTGCCAGAG+TGG | 0.634304 | 8.3:+64457728 | MS.gene84249:CDS |
| TCTTAAGAGGAAGAGAGAGG+AGG | 0.635943 | 8.3:+64456111 | MS.gene84249:CDS |
| CTAGGCGAAGGAGATTTGGA+CGG | 0.640028 | 8.3:+64457610 | MS.gene84249:CDS |
| AAGATTGTAGATTGTCGGAG+TGG | 0.640461 | 8.3:-64457509 | None:intergenic |
| GAGTTGTTGTCGGGTCAGGG+TGG | 0.642746 | 8.3:+64455617 | MS.gene84249:CDS |
| TGAGAATTCGATACAGCCAA+TGG | 0.643809 | 8.3:-64457802 | None:intergenic |
| GATGTTGGAAAGCTGAGTGA+GGG | 0.661886 | 8.3:+64455893 | MS.gene84249:CDS |
| TGCGAATTTCGAGTCTAGTG+GGG | 0.671840 | 8.3:+64455700 | MS.gene84249:CDS |
| GATTCCGGAATGATGAACCG+AGG | 0.672845 | 8.3:+64455854 | MS.gene84249:CDS |
| TGTGGCTTAGGTGTTAACGT+TGG | 0.673988 | 8.3:+64455473 | MS.gene84249:CDS |
| AGGGGAAGACAGGATTCATG+CGG | 0.683109 | 8.3:+64457853 | MS.gene84249:CDS |
| AATGTTGGCGAGAATCATGA+TGG | 0.684957 | 8.3:+64456025 | MS.gene84249:CDS |
| TGGAGCTGATGGTGCTAACG+AGG | 0.694652 | 8.3:+64455670 | MS.gene84249:CDS |
| GCTGGAGAGAAGGTTAAGGG+TGG | 0.695646 | 8.3:+64455650 | MS.gene84249:CDS |
| TGGAGTTGATGGTGCTAACG+AGG | 0.697135 | 8.3:+64455772 | MS.gene84249:CDS |
| GCGTCTGATTTGGTGAAGAG+CGG | 0.702691 | 8.3:+64455986 | MS.gene84249:CDS |
| GAGGGCTTACAGTAATCAGG+AGG | 0.703144 | 8.3:+64456222 | MS.gene84249:CDS |
| AGGATCACAAGGGTTACTCG+CGG | 0.705433 | 8.3:-64456167 | None:intergenic |
| GAACAATTTCAGGATCACAA+GGG | 0.713883 | 8.3:-64456177 | None:intergenic |
| AATAACTGTAGGGACAACTG+AGG | 0.724458 | 8.3:+64455961 | MS.gene84249:CDS |
| GGGGAGAAAGAAGTTCACGG+TGG | 0.759545 | 8.3:+64455719 | MS.gene84249:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTAAAGCAATTTAAGTT+TGG | - | chr8.3:64456361-64456380 | None:intergenic | 15.0% |
| !! | ATCACAAAATTAAATCATGA+AGG | - | chr8.3:64456883-64456902 | None:intergenic | 20.0% |
| !! | ATGACTATTAAATTTCATGT+GGG | + | chr8.3:64456741-64456760 | MS.gene84249:intron | 20.0% |
| !! | TTTCATGTGTAAATGATAAT+CGG | + | chr8.3:64456560-64456579 | MS.gene84249:intron | 20.0% |
| !!! | AACAGTTGATATTAAAACTT+GGG | - | chr8.3:64456663-64456682 | None:intergenic | 20.0% |
| !!! | AACCATGCTTTAAATAAAAA+GGG | - | chr8.3:64457221-64457240 | None:intergenic | 20.0% |
| !!! | CGTATTTTTTAGAGTAATAA+AGG | + | chr8.3:64457347-64457366 | MS.gene84249:intron | 20.0% |
| !!! | GTTTTTAGTTAGTTAATGTT+GGG | + | chr8.3:64457084-64457103 | MS.gene84249:intron | 20.0% |
| !!! | TAACAGTTGATATTAAAACT+TGG | - | chr8.3:64456664-64456683 | None:intergenic | 20.0% |
| !!! | TAACCATGCTTTAAATAAAA+AGG | - | chr8.3:64457222-64457241 | None:intergenic | 20.0% |
| !!! | TCTTATTTTGAGCAAATAAT+TGG | + | chr8.3:64456592-64456611 | MS.gene84249:intron | 20.0% |
| !!! | TGTTGTTGTTATATTAAAAG+TGG | + | chr8.3:64457168-64457187 | MS.gene84249:intron | 20.0% |
| !!! | TGTTTTTAGTTAGTTAATGT+TGG | + | chr8.3:64457083-64457102 | MS.gene84249:intron | 20.0% |
| ! | AAAGAAAATAAACTGACAAG+TGG | - | chr8.3:64456768-64456787 | None:intergenic | 25.0% |
| ! | AAGTATCTAAATTGAATTGC+AGG | + | chr8.3:64457309-64457328 | MS.gene84249:intron | 25.0% |
| ! | AGTAATAAAGGTTTATTAGC+TGG | + | chr8.3:64457359-64457378 | MS.gene84249:intron | 25.0% |
| ! | ATGGTTAACTTATGCATTTA+TGG | + | chr8.3:64457235-64457254 | MS.gene84249:intron | 25.0% |
| ! | ATTCAGTTTCCTTACTATTA+AGG | + | chr8.3:64457137-64457156 | MS.gene84249:intron | 25.0% |
| ! | GATGACTATTAAATTTCATG+TGG | + | chr8.3:64456740-64456759 | MS.gene84249:intron | 25.0% |
| ! | GTTAATGCAAAAGGAAATTT+AGG | - | chr8.3:64457430-64457449 | None:intergenic | 25.0% |
| ! | TGAAATTTAATAGTCATCAG+TGG | - | chr8.3:64456738-64456757 | None:intergenic | 25.0% |
| ! | TGGTTAACTTATGCATTTAT+GGG | + | chr8.3:64457236-64457255 | MS.gene84249:intron | 25.0% |
| ! | TTGTTATATTAAAAGTGGCA+AGG | + | chr8.3:64457173-64457192 | MS.gene84249:intron | 25.0% |
| !! | GAGATATTGTCATAGTATTT+TGG | + | chr8.3:64457016-64457035 | MS.gene84249:intron | 25.0% |
| !! | TATTGGTGAATCTTTCTTTT+TGG | + | chr8.3:64456800-64456819 | MS.gene84249:intron | 25.0% |
| !! | TGCAAAATTATACAAGGTTT+TGG | - | chr8.3:64457454-64457473 | None:intergenic | 25.0% |
| !!! | TCTTTCTGAAACATTCATAT+TGG | + | chr8.3:64456783-64456802 | MS.gene84249:intron | 25.0% |
| AAATGTTCATATCCTCTCTT+TGG | - | chr8.3:64458063-64458082 | None:intergenic | 30.0% | |
| AACAACACACCTTAATAGTA+AGG | - | chr8.3:64457149-64457168 | None:intergenic | 30.0% | |
| AATGTATGCTATCCCAAAAA+GGG | - | chr8.3:64457262-64457281 | None:intergenic | 30.0% | |
| ACGATCAAGTTATAGTAGAT+GGG | + | chr8.3:64457675-64457694 | MS.gene84249:CDS | 30.0% | |
| ATGCTAATGAGATGTGTATT+TGG | + | chr8.3:64456932-64456951 | MS.gene84249:intron | 30.0% | |
| ATTCTCAATTTCTTGTCGAA+AGG | + | chr8.3:64457818-64457837 | MS.gene84249:CDS | 30.0% | |
| TAAATAAAAAGGGCCCATAA+TGG | - | chr8.3:64457211-64457230 | None:intergenic | 30.0% | |
| TATCGGTGATAATATTGTTC+CGG | + | chr8.3:64456051-64456070 | MS.gene84249:CDS | 30.0% | |
| TATGAAGACAGAATTTAAGC+TGG | - | chr8.3:64456859-64456878 | None:intergenic | 30.0% | |
| TCTGTTTGATATGATGAGTT+GGG | + | chr8.3:64456135-64456154 | MS.gene84249:CDS | 30.0% | |
| TGACTCTGCAAAATTATACA+AGG | - | chr8.3:64457460-64457479 | None:intergenic | 30.0% | |
| TGATAATATTGTTCCGGTAT+TGG | + | chr8.3:64456057-64456076 | MS.gene84249:CDS | 30.0% | |
| TGCTTGAAATTTAGTAGACT+TGG | + | chr8.3:64456401-64456420 | MS.gene84249:intron | 30.0% | |
| TTCTCAATTTCTTGTCGAAA+GGG | + | chr8.3:64457819-64457838 | MS.gene84249:CDS | 30.0% | |
| ! | CAATTTAAGTTTGGCTAACT+CGG | - | chr8.3:64456352-64456371 | None:intergenic | 30.0% |
| ! | GAAGTAGTTGAAGATTTTGA+TGG | + | chr8.3:64455932-64455951 | MS.gene84249:CDS | 30.0% |
| ! | TGTAATTGTTCTGTTTCTCA+AGG | + | chr8.3:64456528-64456547 | MS.gene84249:intron | 30.0% |
| !! | AGTTTCATTTAGTTTGCTGA+GGG | + | chr8.3:64456685-64456704 | MS.gene84249:intron | 30.0% |
| !! | TAGTTGAAGATTTTGATGGA+GGG | + | chr8.3:64455936-64455955 | MS.gene84249:CDS | 30.0% |
| !! | TCTGATTTGAAGAAGCTTTT+TGG | + | chr8.3:64458228-64458247 | MS.gene84249:CDS | 30.0% |
| !!! | AATATCTCAGCGTTTTTTTC+CGG | - | chr8.3:64457004-64457023 | None:intergenic | 30.0% |
| !!! | TAGCTTTTTTCTCAGAAATG+TGG | - | chr8.3:64457915-64457934 | None:intergenic | 30.0% |
| AAACATTTCCTAACAAGAGC+AGG | + | chr8.3:64458100-64458119 | MS.gene84249:CDS | 35.0% | |
| AAAGCGATACTAAGTGGTTT+GGG | + | chr8.3:64457767-64457786 | MS.gene84249:CDS | 35.0% | |
| AACATTTCCTAACAAGAGCA+GGG | + | chr8.3:64458101-64458120 | MS.gene84249:CDS | 35.0% | |
| AATCTACAATCTTAGGGAGA+GGG | + | chr8.3:64457519-64457538 | MS.gene84249:CDS | 35.0% | |
| AGAGAGGATATGAACATTTC+TGG | + | chr8.3:64458064-64458083 | MS.gene84249:CDS | 35.0% | |
| ATGGAGGGAAAATAACTGTA+GGG | + | chr8.3:64455951-64455970 | MS.gene84249:CDS | 35.0% | |
| CAATGTATGCTATCCCAAAA+AGG | - | chr8.3:64457263-64457282 | None:intergenic | 35.0% | |
| CTCTGTTTGATATGATGAGT+TGG | + | chr8.3:64456134-64456153 | MS.gene84249:CDS | 35.0% | |
| GAAAAAAGCTAAAGCTAAGC+TGG | + | chr8.3:64457924-64457943 | MS.gene84249:CDS | 35.0% | |
| GAACAATTTCAGGATCACAA+GGG | - | chr8.3:64456180-64456199 | None:intergenic | 35.0% | |
| GACGATCAAGTTATAGTAGA+TGG | + | chr8.3:64457674-64457693 | MS.gene84249:CDS | 35.0% | |
| GAGAGGATATGAACATTTCT+GGG | + | chr8.3:64458065-64458084 | MS.gene84249:CDS | 35.0% | |
| GATGTAGGATTTCTTGATTC+CGG | + | chr8.3:64455839-64455858 | MS.gene84249:CDS | 35.0% | |
| GCAAACATTCTCACCATTAT+GGG | + | chr8.3:64457195-64457214 | MS.gene84249:intron | 35.0% | |
| TCCCTAAGATTGTAGATTGT+CGG | - | chr8.3:64457517-64457536 | None:intergenic | 35.0% | |
| TCCGACAATCTACAATCTTA+GGG | + | chr8.3:64457513-64457532 | MS.gene84249:CDS | 35.0% | |
| TTAGTATCGCTTTCAGGATT+CGG | - | chr8.3:64457760-64457779 | None:intergenic | 35.0% | |
| ! | AAGCTGTTGATTGTTGTTGA+CGG | + | chr8.3:64455392-64455411 | MS.gene84249:CDS | 35.0% |
| ! | GAGAATCATGATGGTGATAT+CGG | + | chr8.3:64456034-64456053 | MS.gene84249:CDS | 35.0% |
| ! | GCATTTGTTAGTTGTTACTG+TGG | + | chr8.3:64456617-64456636 | MS.gene84249:intron | 35.0% |
| ! | TTTGATGAGTCTGGTTTGAT+GGG | + | chr8.3:64455575-64455594 | MS.gene84249:CDS | 35.0% |
| !! | CAGTTTCATTTAGTTTGCTG+AGG | + | chr8.3:64456684-64456703 | MS.gene84249:intron | 35.0% |
| !! | GGCCCTTTTTATTTAAAGCA+TGG | + | chr8.3:64457216-64457235 | MS.gene84249:intron | 35.0% |
| !! | GTAGTTGAAGATTTTGATGG+AGG | + | chr8.3:64455935-64455954 | MS.gene84249:CDS | 35.0% |
| !! | GTTTCATTTAGTTTGCTGAG+GGG | + | chr8.3:64456686-64456705 | MS.gene84249:intron | 35.0% |
| !!! | GGTTTTGGTGTTAATGCAAA+AGG | - | chr8.3:64457439-64457458 | None:intergenic | 35.0% |
| AAAGTTTCCCTGCTCTTGTT+AGG | - | chr8.3:64458111-64458130 | None:intergenic | 40.0% | |
| AACCACTTAGTATCGCTTTC+AGG | - | chr8.3:64457766-64457785 | None:intergenic | 40.0% | |
| AAGATTGTAGATTGTCGGAG+TGG | - | chr8.3:64457512-64457531 | None:intergenic | 40.0% | |
| AATAACTGTAGGGACAACTG+AGG | + | chr8.3:64455961-64455980 | MS.gene84249:CDS | 40.0% | |
| AATGTTGGCGAGAATCATGA+TGG | + | chr8.3:64456025-64456044 | MS.gene84249:CDS | 40.0% | |
| AGATTGTAGATTGTCGGAGT+GGG | - | chr8.3:64457511-64457530 | None:intergenic | 40.0% | |
| ATAAGGTCGGTGAAGATGTT+CGG | + | chr8.3:64457980-64457999 | MS.gene84249:CDS | 40.0% | |
| ATCCTGAAAGCGATACTAAG+TGG | + | chr8.3:64457761-64457780 | MS.gene84249:CDS | 40.0% | |
| ATCTACAATCTTAGGGAGAG+GGG | + | chr8.3:64457520-64457539 | MS.gene84249:CDS | 40.0% | |
| ATGAAGACGAGAAAAGGTTC+AGG | + | chr8.3:64458016-64458035 | MS.gene84249:CDS | 40.0% | |
| CAATCTACAATCTTAGGGAG+AGG | + | chr8.3:64457518-64457537 | MS.gene84249:CDS | 40.0% | |
| CATTGAACAGCAAAATTGGC+AGG | + | chr8.3:64456300-64456319 | MS.gene84249:CDS | 40.0% | |
| CTCCGACAATCTACAATCTT+AGG | + | chr8.3:64457512-64457531 | MS.gene84249:CDS | 40.0% | |
| GAAAGCGATACTAAGTGGTT+TGG | + | chr8.3:64457766-64457785 | MS.gene84249:CDS | 40.0% | |
| GATGGAGGGAAAATAACTGT+AGG | + | chr8.3:64455950-64455969 | MS.gene84249:CDS | 40.0% | |
| GGAACAATTTCAGGATCACA+AGG | - | chr8.3:64456181-64456200 | None:intergenic | 40.0% | |
| GGCAAACATTCTCACCATTA+TGG | + | chr8.3:64457194-64457213 | MS.gene84249:intron | 40.0% | |
| GTAACTGGAGAGAAGGTTAA+GGG | + | chr8.3:64455749-64455768 | MS.gene84249:CDS | 40.0% | |
| GTTCATATCCTCTCTTTGGA+GGG | - | chr8.3:64458059-64458078 | None:intergenic | 40.0% | |
| GTTTGCTTAATCGTTGATGC+CGG | + | chr8.3:64456982-64457001 | MS.gene84249:intron | 40.0% | |
| TGAAGACGAGAAAAGGTTCA+GGG | + | chr8.3:64458017-64458036 | MS.gene84249:CDS | 40.0% | |
| TGAGAATTCGATACAGCCAA+TGG | - | chr8.3:64457805-64457824 | None:intergenic | 40.0% | |
| TGAGGTGAATGAGTTGTTGT+CGG | + | chr8.3:64455607-64455626 | MS.gene84249:CDS | 40.0% | |
| TGTTCATATCCTCTCTTTGG+AGG | - | chr8.3:64458060-64458079 | None:intergenic | 40.0% | |
| TTACCATTGGCGTTTCGATA+AGG | + | chr8.3:64457963-64457982 | MS.gene84249:CDS | 40.0% | |
| ! | AGCTGTTGATTGTTGTTGAC+GGG | + | chr8.3:64455393-64455412 | MS.gene84249:CDS | 40.0% |
| ! | ATGCATTTATGGGCCCTTTT+TGG | + | chr8.3:64457246-64457265 | MS.gene84249:intron | 40.0% |
| ! | GTTTGATGAGTCTGGTTTGA+TGG | + | chr8.3:64455574-64455593 | MS.gene84249:CDS | 40.0% |
| ! | TAGTCTTAAGAGGAAGAGAG+AGG | + | chr8.3:64456108-64456127 | MS.gene84249:CDS | 40.0% |
| ! | TGAAGAAGCTTTTTGGACGT+CGG | + | chr8.3:64458235-64458254 | MS.gene84249:CDS | 40.0% |
| ! | TGCATTTATGGGCCCTTTTT+GGG | + | chr8.3:64457247-64457266 | MS.gene84249:intron | 40.0% |
| ! | TGTTTGTGATGGTGAGTTGT+GGG | + | chr8.3:64455433-64455452 | MS.gene84249:CDS | 40.0% |
| ! | TTGATGAGTCTGGTTTGATG+GGG | + | chr8.3:64455576-64455595 | MS.gene84249:CDS | 40.0% |
| ! | TTGATTGTTGTTGACGGGAA+AGG | + | chr8.3:64455398-64455417 | MS.gene84249:CDS | 40.0% |
| !! | AAGAGTGCGAATTTTGAGTC+TGG | + | chr8.3:64455797-64455816 | MS.gene84249:CDS | 40.0% |
| !! | CGAGCATTGAACAGCAAAAT+TGG | + | chr8.3:64456296-64456315 | MS.gene84249:CDS | 40.0% |
| !! | GAAGTGGTTCTAGTCTTAAG+AGG | + | chr8.3:64456098-64456117 | MS.gene84249:CDS | 40.0% |
| !! | GATAGCATACATTGACTTGC+AGG | + | chr8.3:64457269-64457288 | MS.gene84249:intron | 40.0% |
| !! | GATGAAAGTTGGTGATGCTA+AGG | + | chr8.3:64455550-64455569 | MS.gene84249:CDS | 40.0% |
| AACGCAAAGCATACCATAGC+AGG | + | chr8.3:64458163-64458182 | MS.gene84249:CDS | 45.0% | |
| AACTGAGGATGCGTCTGATT+TGG | + | chr8.3:64455976-64455995 | MS.gene84249:CDS | 45.0% | |
| AAGGTTAAGGGTGGAGTTGA+TGG | + | chr8.3:64455761-64455780 | MS.gene84249:CDS | 45.0% | |
| AATGAGTTGTTGTCGGGTCA+GGG | + | chr8.3:64455614-64455633 | MS.gene84249:CDS | 45.0% | |
| AGTGGGGAGAAAGAAGTTCA+CGG | + | chr8.3:64455716-64455735 | MS.gene84249:CDS | 45.0% | |
| ATACAGCCAATGGCCATACT+TGG | - | chr8.3:64457795-64457814 | None:intergenic | 45.0% | |
| ATGGTCAGTGATACCGATGT+TGG | + | chr8.3:64455878-64455897 | MS.gene84249:CDS | 45.0% | |
| ATTCCGGAATGATGAACCGA+GGG | + | chr8.3:64455855-64455874 | MS.gene84249:CDS | 45.0% | |
| CATTGGCGTTTCGATAAGGT+CGG | + | chr8.3:64457967-64457986 | MS.gene84249:CDS | 45.0% | |
| CCACCAGACAAATCCAATAC+CGG | - | chr8.3:64456073-64456092 | None:intergenic | 45.0% | |
| CGAAAGGGATCCTATAGGAA+GGG | + | chr8.3:64457834-64457853 | MS.gene84249:CDS | 45.0% | |
| CTCACTCAGCTTTCCAACAT+CGG | - | chr8.3:64455894-64455913 | None:intergenic | 45.0% | |
| CTGACACATTCAACAGAACC+TGG | - | chr8.3:64457889-64457908 | None:intergenic | 45.0% | |
| CTTACAGTAATCAGGAGGCT+TGG | + | chr8.3:64456227-64456246 | MS.gene84249:CDS | 45.0% | |
| CTTGTCGAAAGGGATCCTAT+AGG | + | chr8.3:64457829-64457848 | MS.gene84249:CDS | 45.0% | |
| GAAAGGGATCCTATAGGAAG+GGG | + | chr8.3:64457835-64457854 | MS.gene84249:CDS | 45.0% | |
| GAATGTGGTAACTGGAGAGA+AGG | + | chr8.3:64455742-64455761 | MS.gene84249:CDS | 45.0% | |
| GAGGTGAATGAGTTGTTGTC+GGG | + | chr8.3:64455608-64455627 | MS.gene84249:CDS | 45.0% | |
| GAGTCGTGTGTGATGAAAGT+TGG | + | chr8.3:64455539-64455558 | MS.gene84249:CDS | 45.0% | |
| GAGTCTGGATTGCTGAATGT+TGG | + | chr8.3:64456010-64456029 | MS.gene84249:CDS | 45.0% | |
| GATGTTGGAAAGCTGAGTGA+GGG | + | chr8.3:64455893-64455912 | MS.gene84249:CDS | 45.0% | |
| GCTAAAGCTAAGCTGGAGTT+AGG | + | chr8.3:64457931-64457950 | MS.gene84249:CDS | 45.0% | |
| GGACAGATGAAGACGAGAAA+AGG | + | chr8.3:64458010-64458029 | MS.gene84249:CDS | 45.0% | |
| GGTAACTGGAGAGAAGGTTA+AGG | + | chr8.3:64455748-64455767 | MS.gene84249:CDS | 45.0% | |
| GTGAAAGAAGGTCACGATGT+AGG | + | chr8.3:64455824-64455843 | MS.gene84249:CDS | 45.0% | |
| GTGAAGATGTTCGGAATTCG+TGG | + | chr8.3:64457989-64458008 | MS.gene84249:CDS | 45.0% | |
| GTGGGATCATCATACATGCT+AGG | - | chr8.3:64457493-64457512 | None:intergenic | 45.0% | |
| TACAGCCAATGGCCATACTT+GGG | - | chr8.3:64457794-64457813 | None:intergenic | 45.0% | |
| TACCATAGCAGGCATACACT+TGG | + | chr8.3:64458174-64458193 | MS.gene84249:CDS | 45.0% | |
| TATGGTATGCTTTGCGTTGC+AGG | - | chr8.3:64458161-64458180 | None:intergenic | 45.0% | |
| TCGAAAGGGATCCTATAGGA+AGG | + | chr8.3:64457833-64457852 | MS.gene84249:CDS | 45.0% | |
| TCGTCAAGTTCATCTGTGCT+AGG | + | chr8.3:64457592-64457611 | MS.gene84249:CDS | 45.0% | |
| TCTACAATCTTAGGGAGAGG+GGG | + | chr8.3:64457521-64457540 | MS.gene84249:CDS | 45.0% | |
| TCTTAAGAGGAAGAGAGAGG+AGG | + | chr8.3:64456111-64456130 | MS.gene84249:CDS | 45.0% | |
| TGTGGCTTAGGTGTTAACGT+TGG | + | chr8.3:64455473-64455492 | MS.gene84249:CDS | 45.0% | |
| TTACTGTAAGCCCTCCACTT+TGG | - | chr8.3:64456217-64456236 | None:intergenic | 45.0% | |
| TTGGATTTGTCTGGTGGAGA+TGG | + | chr8.3:64456076-64456095 | MS.gene84249:CDS | 45.0% | |
| ! | AAGAAGCTTTTTGGACGTCG+GGG | + | chr8.3:64458237-64458256 | MS.gene84249:CDS | 45.0% |
| ! | AGTGCGAATTTCGAGTCTAG+TGG | + | chr8.3:64455698-64455717 | MS.gene84249:CDS | 45.0% |
| ! | ATTGTTGTTGACGGGAAAGG+TGG | + | chr8.3:64455401-64455420 | MS.gene84249:CDS | 45.0% |
| ! | CTGTTTGTGATGGTGAGTTG+TGG | + | chr8.3:64455432-64455451 | MS.gene84249:CDS | 45.0% |
| ! | GAAGAAGCTTTTTGGACGTC+GGG | + | chr8.3:64458236-64458255 | MS.gene84249:CDS | 45.0% |
| ! | GATTTGGTTGGGGAAGAATG+TGG | + | chr8.3:64455455-64455474 | MS.gene84249:CDS | 45.0% |
| ! | GCTAAGGTGTTTGATGAGTC+TGG | + | chr8.3:64455566-64455585 | MS.gene84249:CDS | 45.0% |
| ! | GGGTTTGATGCTGTTTGTGA+TGG | + | chr8.3:64455422-64455441 | MS.gene84249:CDS | 45.0% |
| ! | GTCTGGTTTGATGGGGTTTA+AGG | + | chr8.3:64455583-64455602 | MS.gene84249:CDS | 45.0% |
| ! | GTGAGTTGTGGGATTTGGTT+GGG | + | chr8.3:64455444-64455463 | MS.gene84249:CDS | 45.0% |
| ! | GTGCGAATTTCGAGTCTAGT+GGG | + | chr8.3:64455699-64455718 | MS.gene84249:CDS | 45.0% |
| ! | GTTCCGGTATTGGATTTGTC+TGG | + | chr8.3:64456067-64456086 | MS.gene84249:CDS | 45.0% |
| ! | TAGGCGTGGCTTTTTACCAT+TGG | + | chr8.3:64457950-64457969 | MS.gene84249:CDS | 45.0% |
| ! | TGAGTTGTGGGATTTGGTTG+GGG | + | chr8.3:64455445-64455464 | MS.gene84249:CDS | 45.0% |
| ! | TGATGGTGAGTTGTGGGATT+TGG | + | chr8.3:64455439-64455458 | MS.gene84249:CDS | 45.0% |
| ! | TGCGAATTTCGAGTCTAGTG+GGG | + | chr8.3:64455700-64455719 | MS.gene84249:CDS | 45.0% |
| ! | TTGTTGTTGACGGGAAAGGT+GGG | + | chr8.3:64455402-64455421 | MS.gene84249:CDS | 45.0% |
| ! | TTTGATGGGGTTTAAGGCTG+AGG | + | chr8.3:64455589-64455608 | MS.gene84249:CDS | 45.0% |
| !! | AGTGCGAATTTTGAGTCTGG+TGG | + | chr8.3:64455800-64455819 | MS.gene84249:CDS | 45.0% |
| !! | GTGCGAATTTTGAGTCTGGT+GGG | + | chr8.3:64455801-64455820 | MS.gene84249:CDS | 45.0% |
| !! | TCAGGCATCGGAACAATTTC+AGG | - | chr8.3:64456190-64456209 | None:intergenic | 45.0% |
| !! | TGAGGGTAATGGTGATGGAA+TGG | + | chr8.3:64455910-64455929 | MS.gene84249:CDS | 45.0% |
| !! | TGCGAATTTTGAGTCTGGTG+GGG | + | chr8.3:64455802-64455821 | MS.gene84249:CDS | 45.0% |
| !!! | CACTTTGGCTTTTCAGGCAT+CGG | - | chr8.3:64456202-64456221 | None:intergenic | 45.0% |
| AAGGTTAAGGGTGGAGCTGA+TGG | + | chr8.3:64455659-64455678 | MS.gene84249:CDS | 50.0% | |
| ACTGGAGAGAAGGTTAAGGG+TGG | + | chr8.3:64455752-64455771 | MS.gene84249:CDS | 50.0% | |
| AGAAGTTCACGGTGGGAATG+TGG | + | chr8.3:64455727-64455746 | MS.gene84249:CDS | 50.0% | |
| AGGATCACAAGGGTTACTCG+CGG | - | chr8.3:64456170-64456189 | None:intergenic | 50.0% | |
| AGGGGAAGACAGGATTCATG+CGG | + | chr8.3:64457853-64457872 | MS.gene84249:CDS | 50.0% | |
| AGTTCATCTGTGCTAGGCGA+AGG | + | chr8.3:64457598-64457617 | MS.gene84249:CDS | 50.0% | |
| CAAGTCGTCGTGCTGTGAAA+CGG | + | chr8.3:64457638-64457657 | MS.gene84249:CDS | 50.0% | |
| CACCAAGTGTATGCCTGCTA+TGG | - | chr8.3:64458179-64458198 | None:intergenic | 50.0% | |
| CAGCTTTACCCTCCAAAGAG+AGG | + | chr8.3:64458048-64458067 | MS.gene84249:CDS | 50.0% | |
| CATCCCTCGGTTCATCATTC+CGG | - | chr8.3:64455861-64455880 | None:intergenic | 50.0% | |
| CGACCTTATCGAAACGCCAA+TGG | - | chr8.3:64457969-64457988 | None:intergenic | 50.0% | |
| CGATGCCTGAAAAGCCAAAG+TGG | + | chr8.3:64456200-64456219 | MS.gene84249:CDS | 50.0% | |
| CGATGTTGGAAAGCTGAGTG+AGG | + | chr8.3:64455892-64455911 | MS.gene84249:CDS | 50.0% | |
| CTAGGCGAAGGAGATTTGGA+CGG | + | chr8.3:64457610-64457629 | MS.gene84249:CDS | 50.0% | |
| CTTGACGAGCTTCGTGAAGA+TGG | - | chr8.3:64457580-64457599 | None:intergenic | 50.0% | |
| GAATGAGTTGTTGTCGGGTC+AGG | + | chr8.3:64455613-64455632 | MS.gene84249:CDS | 50.0% | |
| GAGGGCTTACAGTAATCAGG+AGG | + | chr8.3:64456222-64456241 | MS.gene84249:CDS | 50.0% | |
| GATTCCGGAATGATGAACCG+AGG | + | chr8.3:64455854-64455873 | MS.gene84249:CDS | 50.0% | |
| GCCTGAAAAGCCAAAGTGGA+GGG | + | chr8.3:64456204-64456223 | MS.gene84249:CDS | 50.0% | |
| GGAAAGCTGAGTGAGGGTAA+TGG | + | chr8.3:64455899-64455918 | MS.gene84249:CDS | 50.0% | |
| GGGAGAAAGAAGTTCACGGT+GGG | + | chr8.3:64455720-64455739 | MS.gene84249:CDS | 50.0% | |
| GTAATCAGGAGGCTTGGAAG+CGG | + | chr8.3:64456233-64456252 | MS.gene84249:CDS | 50.0% | |
| GTGGAGGGCTTACAGTAATC+AGG | + | chr8.3:64456219-64456238 | MS.gene84249:CDS | 50.0% | |
| GTGGCTGGAGAGAAGGTTAA+GGG | + | chr8.3:64455647-64455666 | MS.gene84249:CDS | 50.0% | |
| GTTGGGGAAGAATGTGGCTT+AGG | + | chr8.3:64455461-64455480 | MS.gene84249:CDS | 50.0% | |
| TAATCAGGAGGCTTGGAAGC+GGG | + | chr8.3:64456234-64456253 | MS.gene84249:CDS | 50.0% | |
| TAGGCGAAGGAGATTTGGAC+GGG | + | chr8.3:64457611-64457630 | MS.gene84249:CDS | 50.0% | |
| TCCTATAGGAAGGGGAAGAC+AGG | + | chr8.3:64457843-64457862 | MS.gene84249:CDS | 50.0% | |
| TCCTGTCTTCCCCTTCCTAT+AGG | - | chr8.3:64457847-64457866 | None:intergenic | 50.0% | |
| TGCCTGAAAAGCCAAAGTGG+AGG | + | chr8.3:64456203-64456222 | MS.gene84249:CDS | 50.0% | |
| TGTGCTAGGCGAAGGAGATT+TGG | + | chr8.3:64457606-64457625 | MS.gene84249:CDS | 50.0% | |
| TTGTCTGGTGGAGATGGAAG+TGG | + | chr8.3:64456082-64456101 | MS.gene84249:CDS | 50.0% | |
| TTTCACAGCACGACGACTTG+TGG | - | chr8.3:64457638-64457657 | None:intergenic | 50.0% | |
| ! | AGTGGTTTGGGACCCAAGTA+TGG | + | chr8.3:64457779-64457798 | MS.gene84249:CDS | 50.0% |
| ! | ATCAAGCTGAAGTGCCAGAG+TGG | + | chr8.3:64457728-64457747 | MS.gene84249:CDS | 50.0% |
| ! | CCGGTATTGGATTTGTCTGG+TGG | + | chr8.3:64456070-64456089 | MS.gene84249:CDS | 50.0% |
| ! | CTGAGTGAGGGTAATGGTGA+TGG | + | chr8.3:64455905-64455924 | MS.gene84249:CDS | 50.0% |
| ! | GGTGAGTTGTGGGATTTGGT+TGG | + | chr8.3:64455443-64455462 | MS.gene84249:CDS | 50.0% |
| !! | GCGTCTGATTTGGTGAAGAG+CGG | + | chr8.3:64455986-64456005 | MS.gene84249:CDS | 50.0% |
| !! | TGGAGTTGATGGTGCTAACG+AGG | + | chr8.3:64455772-64455791 | MS.gene84249:CDS | 50.0% |
| AGCTAAGCTGGAGTTAGGCG+TGG | + | chr8.3:64457936-64457955 | MS.gene84249:CDS | 55.0% | |
| AGTTGTTGTCGGGTCAGGGT+GGG | + | chr8.3:64455618-64455637 | MS.gene84249:CDS | 55.0% | |
| CACGGTGGGAATGTGGTAAC+TGG | + | chr8.3:64455734-64455753 | MS.gene84249:CDS | 55.0% | |
| CGGAATGATGAACCGAGGGA+TGG | + | chr8.3:64455859-64455878 | MS.gene84249:CDS | 55.0% | |
| CGGTATCACTGACCATCCCT+CGG | - | chr8.3:64455874-64455893 | None:intergenic | 55.0% | |
| GAATGTGGTGGCTGGAGAGA+AGG | + | chr8.3:64455640-64455659 | MS.gene84249:CDS | 55.0% | |
| GAGTCTGGTGGGGTGAAAGA+AGG | + | chr8.3:64455812-64455831 | MS.gene84249:CDS | 55.0% | |
| GCTGGAGAGAAGGTTAAGGG+TGG | + | chr8.3:64455650-64455669 | MS.gene84249:CDS | 55.0% | |
| GGGGAGAAAGAAGTTCACGG+TGG | + | chr8.3:64455719-64455738 | MS.gene84249:CDS | 55.0% | |
| GGTATGCTTTGCGTTGCAGG+AGG | - | chr8.3:64458158-64458177 | None:intergenic | 55.0% | |
| GGTGGCTGGAGAGAAGGTTA+AGG | + | chr8.3:64455646-64455665 | MS.gene84249:CDS | 55.0% | |
| TGGGACCCAAGTATGGCCAT+TGG | + | chr8.3:64457786-64457805 | MS.gene84249:CDS | 55.0% | |
| TTGGTGAAGAGCGGTGAGTC+TGG | + | chr8.3:64455995-64456014 | MS.gene84249:CDS | 55.0% | |
| ! | TGGAGCTGATGGTGCTAACG+AGG | + | chr8.3:64455670-64455689 | MS.gene84249:CDS | 55.0% |
| !! | CGTTGGTTCGACGCTGAAAC+TGG | + | chr8.3:64455490-64455509 | MS.gene84249:CDS | 55.0% |
| !! | GCGGGTTCTGTTGTTTCGAG+AGG | + | chr8.3:64456252-64456271 | MS.gene84249:CDS | 55.0% |
| !!! | GCCCTCCACTTTGGCTTTTC+AGG | - | chr8.3:64456208-64456227 | None:intergenic | 55.0% |
| CATCAGCTCGCATCTGCGTG+GGG | + | chr8.3:64457698-64457717 | MS.gene84249:CDS | 60.0% | |
| GAGTTGTTGTCGGGTCAGGG+TGG | + | chr8.3:64455617-64455636 | MS.gene84249:CDS | 60.0% | |
| GCATCAGCTCGCATCTGCGT+GGG | + | chr8.3:64457697-64457716 | MS.gene84249:CDS | 60.0% | |
| GGATTCGGACCAGTCCACTC+TGG | - | chr8.3:64457745-64457764 | None:intergenic | 60.0% | |
| ! | GCTGAAGTGCCAGAGTGGAC+TGG | + | chr8.3:64457733-64457752 | MS.gene84249:CDS | 60.0% |
| CAGGGTGGGAATGTGGTGGC+TGG | + | chr8.3:64455632-64455651 | MS.gene84249:CDS | 65.0% | |
| GGCATCAGCTCGCATCTGCG+TGG | + | chr8.3:64457696-64457715 | MS.gene84249:CDS | 65.0% | |
| GGGTCAGGGTGGGAATGTGG+TGG | + | chr8.3:64455628-64455647 | MS.gene84249:CDS | 65.0% | |
| GTCGGGTCAGGGTGGGAATG+TGG | + | chr8.3:64455625-64455644 | MS.gene84249:CDS | 65.0% | |
| TCATGCGGCTGCGCAGTTCC+AGG | + | chr8.3:64457868-64457887 | MS.gene84249:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 64455359 | 64458263 | 64455359 | ID=MS.gene84249 |
| chr8.3 | mRNA | 64455359 | 64458263 | 64455359 | ID=MS.gene84249.t1;Parent=MS.gene84249 |
| chr8.3 | exon | 64455359 | 64456321 | 64455359 | ID=MS.gene84249.t1.exon1;Parent=MS.gene84249.t1 |
| chr8.3 | CDS | 64455359 | 64456321 | 64455359 | ID=cds.MS.gene84249.t1;Parent=MS.gene84249.t1 |
| chr8.3 | exon | 64457475 | 64458263 | 64457475 | ID=MS.gene84249.t1.exon2;Parent=MS.gene84249.t1 |
| chr8.3 | CDS | 64457475 | 64458263 | 64457475 | ID=cds.MS.gene84249.t1;Parent=MS.gene84249.t1 |
| Gene Sequence |
| Protein sequence |
