Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056801.t1 | KEH18842.1 | 92.3 | 585 | 43 | 1 | 1 | 583 | 9 | 593 | 9.80E-278 | 965.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056801.t1 | Q84JT7 | 30.5 | 577 | 276 | 14 | 1 | 570 | 72 | 530 | 1.1e-56 | 222.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056801.t1 | A0A072TN61 | 92.3 | 585 | 43 | 1 | 1 | 583 | 9 | 593 | 7.0e-278 | 965.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene056801.t1 | TR | ARID |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene056801 | 0.835002 | 2.16E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene056801 | 0.816006 | 6.91E-52 | -1.69E-46 |
| MS.gene056801 | MS.gene058261 | 0.822028 | 2.95E-53 | -1.69E-46 |
| MS.gene056801 | MS.gene066477 | 0.807729 | 4.39E-50 | -1.69E-46 |
| MS.gene056801 | MS.gene072641 | 0.837491 | 5.04E-57 | -1.69E-46 |
| MS.gene056801 | MS.gene20061 | 0.803623 | 3.19E-49 | -1.69E-46 |
| MS.gene056801 | MS.gene28632 | 0.834848 | 2.36E-56 | -1.69E-46 |
| MS.gene056801 | MS.gene29355 | 0.804699 | 1.91E-49 | -1.69E-46 |
| MS.gene056801 | MS.gene44631 | 0.803404 | 3.54E-49 | -1.69E-46 |
| MS.gene056801 | MS.gene49047 | 0.810719 | 1.00E-50 | -1.69E-46 |
| MS.gene056801 | MS.gene58098 | 0.801914 | 7.19E-49 | -1.69E-46 |
| MS.gene056801 | MS.gene81280 | 0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene056801 | MS.gene84249 | 0.841411 | 4.83E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056801.t1 | MTR_8g028905 | 91.453 | 585 | 48 | 1 | 1 | 583 | 9 | 593 | 0.0 | 1071 |
| MS.gene056801.t1 | MTR_7g078120 | 42.857 | 602 | 290 | 16 | 1 | 582 | 1 | 568 | 5.70e-140 | 419 |
| MS.gene056801.t1 | MTR_7g078120 | 42.857 | 602 | 290 | 16 | 1 | 582 | 1 | 568 | 2.60e-139 | 419 |
| MS.gene056801.t1 | MTR_8g098605 | 38.415 | 328 | 186 | 8 | 251 | 572 | 246 | 563 | 1.03e-59 | 209 |
| MS.gene056801.t1 | MTR_8g098645 | 50.867 | 173 | 83 | 2 | 400 | 572 | 143 | 313 | 5.54e-52 | 182 |
| MS.gene056801.t1 | MTR_1g073380 | 34.603 | 315 | 183 | 6 | 277 | 572 | 255 | 565 | 7.22e-50 | 182 |
| MS.gene056801.t1 | MTR_8g098635 | 35.077 | 325 | 160 | 8 | 250 | 572 | 72 | 347 | 2.90e-48 | 172 |
| MS.gene056801.t1 | MTR_1g073590 | 34.615 | 312 | 175 | 9 | 277 | 572 | 254 | 552 | 1.14e-47 | 176 |
| MS.gene056801.t1 | MTR_8g098635 | 34.295 | 312 | 155 | 7 | 263 | 572 | 1 | 264 | 1.90e-47 | 168 |
| MS.gene056801.t1 | MTR_1g073530 | 46.023 | 176 | 93 | 2 | 397 | 572 | 382 | 555 | 2.84e-45 | 169 |
| MS.gene056801.t1 | MTR_6g071350 | 35.887 | 248 | 116 | 8 | 251 | 497 | 163 | 368 | 8.35e-31 | 124 |
| MS.gene056801.t1 | MTR_7g066890 | 35.450 | 189 | 109 | 5 | 382 | 564 | 179 | 360 | 3.62e-28 | 116 |
| MS.gene056801.t1 | MTR_7g066890 | 35.450 | 189 | 109 | 5 | 382 | 564 | 281 | 462 | 5.39e-27 | 114 |
| MS.gene056801.t1 | MTR_5g048010 | 32.258 | 248 | 129 | 9 | 251 | 497 | 74 | 283 | 2.57e-22 | 98.6 |
| MS.gene056801.t1 | MTR_3g023780 | 34.066 | 182 | 105 | 5 | 400 | 570 | 149 | 326 | 7.06e-22 | 99.8 |
| MS.gene056801.t1 | MTR_7g066880 | 30.890 | 191 | 119 | 4 | 380 | 564 | 169 | 352 | 9.22e-20 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056801.t1 | AT2G46040 | 39.628 | 323 | 154 | 9 | 253 | 570 | 244 | 530 | 3.96e-63 | 218 |
| MS.gene056801.t1 | AT2G46040 | 39.628 | 323 | 154 | 9 | 253 | 570 | 244 | 530 | 3.96e-63 | 218 |
| MS.gene056801.t1 | AT2G46040 | 39.628 | 323 | 154 | 9 | 253 | 570 | 258 | 544 | 4.07e-63 | 218 |
| MS.gene056801.t1 | AT4G11400 | 34.402 | 343 | 185 | 8 | 263 | 581 | 225 | 551 | 2.25e-53 | 191 |
| MS.gene056801.t1 | AT4G11400 | 34.402 | 343 | 185 | 8 | 263 | 581 | 225 | 551 | 2.25e-53 | 191 |
| MS.gene056801.t1 | AT5G04110 | 38.415 | 164 | 87 | 5 | 400 | 552 | 362 | 522 | 4.24e-28 | 119 |
| MS.gene056801.t1 | AT5G04110 | 38.415 | 164 | 87 | 5 | 400 | 552 | 361 | 521 | 4.44e-28 | 119 |
| MS.gene056801.t1 | AT5G04110 | 38.415 | 164 | 87 | 5 | 400 | 552 | 361 | 521 | 4.44e-28 | 119 |
| MS.gene056801.t1 | AT5G04110 | 36.735 | 147 | 79 | 5 | 400 | 535 | 361 | 504 | 1.77e-20 | 95.5 |
| MS.gene056801.t1 | AT1G26580 | 32.124 | 193 | 110 | 6 | 396 | 570 | 65 | 254 | 7.37e-19 | 89.7 |
| MS.gene056801.t1 | AT1G26580 | 32.124 | 193 | 110 | 6 | 396 | 570 | 131 | 320 | 1.00e-18 | 89.7 |
| MS.gene056801.t1 | AT1G26580 | 32.124 | 193 | 110 | 6 | 396 | 570 | 131 | 320 | 1.00e-18 | 89.7 |
| MS.gene056801.t1 | AT2G03470 | 32.240 | 183 | 105 | 6 | 399 | 570 | 121 | 295 | 1.16e-17 | 86.3 |
| MS.gene056801.t1 | AT2G03470 | 32.240 | 183 | 105 | 6 | 399 | 570 | 122 | 296 | 1.22e-17 | 86.3 |
| MS.gene056801.t1 | AT1G13880 | 29.843 | 191 | 112 | 7 | 402 | 579 | 140 | 321 | 2.74e-16 | 82.0 |
| MS.gene056801.t1 | AT1G13880 | 29.843 | 191 | 112 | 7 | 402 | 579 | 130 | 311 | 2.90e-16 | 81.6 |
| MS.gene056801.t1 | AT1G13880 | 29.843 | 191 | 112 | 7 | 402 | 579 | 131 | 312 | 2.97e-16 | 81.6 |
Find 174 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCACTTAGTATCGCTTTC+AGG | 0.202455 | 8.4:+66598928 | None:intergenic |
| TCAAGCATCGGAACAATTTC+AGG | 0.205061 | 8.4:+66600490 | None:intergenic |
| AGAGAGGATATGAACATTTC+TGG | 0.214678 | 8.4:-66598627 | MS.gene056801:CDS |
| GTCTGGTTTGATGGGGTTTA+AGG | 0.229952 | 8.4:-66601094 | MS.gene056801:CDS |
| CTCCGACAATCTACAATCTT+AGG | 0.256515 | 8.4:-66599179 | MS.gene056801:CDS |
| GACGATCAAGTTATAGTAGA+TGG | 0.274070 | 8.4:-66599017 | MS.gene056801:CDS |
| CGAGCATTGAACAGCAAAAT+TGG | 0.292781 | 8.4:-66600381 | MS.gene056801:CDS |
| TATGGTATGCTTTGCGTTGC+AGG | 0.295894 | 8.4:+66598533 | None:intergenic |
| GTGAGTTGTGGGATTTGGTT+GGG | 0.298315 | 8.4:-66601233 | MS.gene056801:CDS |
| TGATGGTGAGTTGTGGGATT+TGG | 0.308604 | 8.4:-66601238 | MS.gene056801:CDS |
| AAATGTTCATATCCTCTCTT+TGG | 0.311222 | 8.4:+66598631 | None:intergenic |
| TGATAATATTGTTCCGGTAT+TGG | 0.317593 | 8.4:-66600620 | MS.gene056801:CDS |
| AAAGTTTCCCTGCTCTTGTT+AGG | 0.326065 | 8.4:+66598583 | None:intergenic |
| CGTTGGTTCGACGCTGAAAC+TGG | 0.334461 | 8.4:-66601187 | MS.gene056801:CDS |
| CATCCCTCGATTCATCATTC+TGG | 0.335310 | 8.4:+66600819 | None:intergenic |
| TGTGCTAGGCGAAGGAGATT+TGG | 0.343980 | 8.4:-66599085 | MS.gene056801:CDS |
| TTAGTATCGCTTTCAGGATT+CGG | 0.348247 | 8.4:+66598934 | None:intergenic |
| AAGGTTAAGGGTGGAGTTGA+TGG | 0.350428 | 8.4:-66600916 | MS.gene056801:CDS |
| GTTTGATGAGTCTGGTTTGA+TGG | 0.354024 | 8.4:-66601103 | MS.gene056801:CDS |
| GGTGAGTTGTGGGATTTGGT+TGG | 0.366075 | 8.4:-66601234 | MS.gene056801:CDS |
| CAGGGTGGGAATGTGGTGGC+TGG | 0.374383 | 8.4:-66601045 | MS.gene056801:CDS |
| ATGAAGACGAGAAAAGGTTC+AGG | 0.374801 | 8.4:-66598675 | MS.gene056801:CDS |
| GTTGGGGAAGAATGTGGCTT+AGG | 0.382436 | 8.4:-66601216 | MS.gene056801:CDS |
| AGTGGTTTGGGACCCAAGTA+TGG | 0.390417 | 8.4:-66598912 | MS.gene056801:CDS |
| GCTAAGGTGTTTGATGAGTC+TGG | 0.404181 | 8.4:-66601111 | MS.gene056801:CDS |
| GAAAGCGATACTAAGTGGTT+TGG | 0.405886 | 8.4:-66598925 | MS.gene056801:CDS |
| TTTGATGAGTCTGGTTTGAT+GGG | 0.408271 | 8.4:-66601102 | MS.gene056801:CDS |
| CTTGACGAGCTTCGTGAAGA+TGG | 0.408980 | 8.4:+66599114 | None:intergenic |
| CACGGTGGGAATGTGGTAAC+TGG | 0.409472 | 8.4:-66600943 | MS.gene056801:CDS |
| TCCCTAAGATTGTAGATTGT+CGG | 0.412515 | 8.4:+66599177 | None:intergenic |
| AACTGAGGATGCGTCTGATT+TGG | 0.415902 | 8.4:-66600701 | MS.gene056801:CDS |
| GAATGAGTTGTTGTCGGGTC+AGG | 0.421751 | 8.4:-66601064 | MS.gene056801:CDS |
| TCATGCGGCTGCGCAGTTCC+AGG | 0.424066 | 8.4:-66598823 | MS.gene056801:CDS |
| TTCTCAATTTCTTGTCGAAA+GGG | 0.425727 | 8.4:-66598872 | MS.gene056801:CDS |
| TTACCATTGGCGTTTCGATA+AGG | 0.427484 | 8.4:-66598728 | MS.gene056801:CDS |
| TTGGATTTGTCTGGTGGTGA+TGG | 0.430521 | 8.4:-66600601 | MS.gene056801:CDS |
| TGTTTGTGATGGTGAGTTGT+GGG | 0.431433 | 8.4:-66601244 | MS.gene056801:CDS |
| TCCTGTCTTCCCCTTCCTAT+AGG | 0.432461 | 8.4:+66598847 | None:intergenic |
| TCCTATAGGAAGGGGAAGAC+AGG | 0.433625 | 8.4:-66598848 | MS.gene056801:CDS |
| AAAGCGATACTAAGTGGTTT+GGG | 0.433827 | 8.4:-66598924 | MS.gene056801:CDS |
| TTGGTGAAGAGCGGTGAGTC+TGG | 0.434679 | 8.4:-66600682 | MS.gene056801:CDS |
| ATACAGCCAATGGCCATACT+TGG | 0.437133 | 8.4:+66598899 | None:intergenic |
| AAACATTTCCTAACAAGAGC+AGG | 0.439152 | 8.4:-66598591 | MS.gene056801:CDS |
| GTGGAGGGCTTACAGTAATC+AGG | 0.440528 | 8.4:-66600458 | MS.gene056801:CDS |
| TGAGTTGTGGGATTTGGTTG+GGG | 0.451450 | 8.4:-66601232 | MS.gene056801:CDS |
| CTCTGTTTGATATGATGAGT+TGG | 0.453588 | 8.4:-66600543 | MS.gene056801:CDS |
| TTTGATGGGGTTTAAGGCTG+AGG | 0.456932 | 8.4:-66601088 | MS.gene056801:CDS |
| GTGAAGATGTTCGGAATTCG+TGG | 0.464902 | 8.4:-66598702 | MS.gene056801:CDS |
| GGTGGCTGGAGAGAAGGTTA+AGG | 0.466762 | 8.4:-66601031 | MS.gene056801:CDS |
| TATCGGTGATAATATTGTTC+CGG | 0.468339 | 8.4:-66600626 | MS.gene056801:CDS |
| GGTAACTGGAGAGAAGGTTA+AGG | 0.476059 | 8.4:-66600929 | MS.gene056801:CDS |
| GAGAGGATATGAACATTTCT+GGG | 0.477135 | 8.4:-66598626 | MS.gene056801:CDS |
| ATTCTCAATTTCTTGTCGAA+AGG | 0.481791 | 8.4:-66598873 | MS.gene056801:CDS |
| GTGGCTGGAGAGAAGGTTAA+GGG | 0.482398 | 8.4:-66601030 | MS.gene056801:CDS |
| GTTCCGGTATTGGATTTGTC+TGG | 0.486514 | 8.4:-66600610 | MS.gene056801:CDS |
| GGACAGATGAAGACGAGAAA+AGG | 0.486764 | 8.4:-66598681 | MS.gene056801:CDS |
| CTGACACATTCAACAGAACC+TGG | 0.487585 | 8.4:+66598805 | None:intergenic |
| ATTGTTGTTGACGGGAAAGG+TGG | 0.490249 | 8.4:-66601276 | MS.gene056801:CDS |
| AACGCAAAGCATACCATAGC+AGG | 0.490321 | 8.4:-66598528 | MS.gene056801:CDS |
| TGTTCATATCCTCTCTTTGG+AGG | 0.491805 | 8.4:+66598634 | None:intergenic |
| GAATCAAGAAATCCTACATC+GGG | 0.494770 | 8.4:+66600841 | None:intergenic |
| CTGTTTGTGATGGTGAGTTG+TGG | 0.494879 | 8.4:-66601245 | MS.gene056801:CDS |
| GCATCGGCTCGCATCTGCGT+GGG | 0.496198 | 8.4:-66598994 | MS.gene056801:CDS |
| TCTGTTTGATATGATGAGTT+GGG | 0.500139 | 8.4:-66600542 | MS.gene056801:CDS |
| GAGAATCATGATGGTGATAT+CGG | 0.501429 | 8.4:-66600643 | MS.gene056801:CDS |
| TTGTCTGGTGGTGATGGAAG+TGG | 0.503537 | 8.4:-66600595 | MS.gene056801:CDS |
| GAGTCGTGTGTGATGAAAGT+TGG | 0.506590 | 8.4:-66601138 | MS.gene056801:CDS |
| GGGTTTGATGCTGTTTGTGA+TGG | 0.509454 | 8.4:-66601255 | MS.gene056801:CDS |
| TGGGACCCAAGTATGGCCAT+TGG | 0.513214 | 8.4:-66598905 | MS.gene056801:CDS |
| AGCTGTTGATTGTTGTTGAC+GGG | 0.513550 | 8.4:-66601284 | MS.gene056801:CDS |
| ATAAGGTCGGTGAAGATGTT+CGG | 0.518788 | 8.4:-66598711 | MS.gene056801:CDS |
| CAAGTCGTCGTGCTGTGAAA+CGG | 0.521739 | 8.4:-66599053 | MS.gene056801:CDS |
| GTAACTGGAGAGAAGGTTAA+GGG | 0.523633 | 8.4:-66600928 | MS.gene056801:CDS |
| GCTAAAGCTAAGCTGGAGTT+AGG | 0.528280 | 8.4:-66598760 | MS.gene056801:CDS |
| GAATGTGGTGGCTGGAGAGA+AGG | 0.530094 | 8.4:-66601037 | MS.gene056801:CDS |
| TCCGACAATCTACAATCTTA+GGG | 0.531884 | 8.4:-66599178 | MS.gene056801:CDS |
| TGAGGTGAATGAGTTGTTGT+CGG | 0.533812 | 8.4:-66601070 | MS.gene056801:CDS |
| AAGGTTAAGGGTGGAGCTGA+TGG | 0.534301 | 8.4:-66601018 | MS.gene056801:CDS |
| GAAGTGGTTCTAGTCTTAAG+AGG | 0.534929 | 8.4:-66600579 | MS.gene056801:CDS |
| CATTGAACAGCAAAATTGGC+AGG | 0.537300 | 8.4:-66600377 | MS.gene056801:intron |
| AATGAGTTGTTGTCGGGTCA+GGG | 0.537370 | 8.4:-66601063 | MS.gene056801:CDS |
| GATTTGGTTGGGGAAGAATG+TGG | 0.539468 | 8.4:-66601222 | MS.gene056801:CDS |
| CTGAGTGAGGGTAATGGTGA+TGG | 0.540918 | 8.4:-66600772 | MS.gene056801:CDS |
| CTTACAGTAATCAGGAGGCT+TGG | 0.542653 | 8.4:-66600450 | MS.gene056801:CDS |
| TAATCAGGAGGCTTGGAAGC+GGG | 0.543149 | 8.4:-66600443 | MS.gene056801:CDS |
| TGAGGGTAATGGTGATGGAA+TGG | 0.545924 | 8.4:-66600767 | MS.gene056801:CDS |
| GTGCGAATTTCGAGTCTAGT+GGG | 0.546249 | 8.4:-66600978 | MS.gene056801:CDS |
| GTGAAAGAAGTTCCCGATGT+AGG | 0.550596 | 8.4:-66600853 | MS.gene056801:CDS |
| AGTTCATCTGTGCTAGGCGA+AGG | 0.552705 | 8.4:-66599093 | MS.gene056801:CDS |
| GTCGGGTCAGGGTGGGAATG+TGG | 0.553223 | 8.4:-66601052 | MS.gene056801:CDS |
| TTACTGTAAGCCCTCCACTT+TGG | 0.553928 | 8.4:+66600463 | None:intergenic |
| CTTGTCGAAAGGGATCCTAT+AGG | 0.556633 | 8.4:-66598862 | MS.gene056801:CDS |
| ACGATCAAGTTATAGTAGAT+GGG | 0.556760 | 8.4:-66599016 | MS.gene056801:CDS |
| GCGGGTTCTGTTGTTTCGAG+AGG | 0.558329 | 8.4:-66600425 | MS.gene056801:CDS |
| TGAAGACGAGAAAAGGTTCA+GGG | 0.560005 | 8.4:-66598674 | MS.gene056801:CDS |
| TTGATTGTTGTTGACGGGAA+AGG | 0.563358 | 8.4:-66601279 | MS.gene056801:CDS |
| GATGGAGGGAAAATAACTGT+AGG | 0.564686 | 8.4:-66600727 | MS.gene056801:CDS |
| GGATTCGGAGCAGTCCACTC+TGG | 0.565588 | 8.4:+66598949 | None:intergenic |
| ATGGTCAGTGATACCGATGT+TGG | 0.565824 | 8.4:-66600799 | MS.gene056801:CDS |
| AAGCTGTTGATTGTTGTTGA+CGG | 0.566769 | 8.4:-66601285 | MS.gene056801:CDS |
| GAGGTGAATGAGTTGTTGTC+GGG | 0.568676 | 8.4:-66601069 | MS.gene056801:CDS |
| TCGTCAAGTTCATCTGTGCT+AGG | 0.569671 | 8.4:-66599099 | MS.gene056801:CDS |
| CAATCTACAATCTTAGGGAG+AGG | 0.570505 | 8.4:-66599173 | MS.gene056801:CDS |
| CCACCAGACAAATCCAATAC+CGG | 0.573971 | 8.4:+66600607 | None:intergenic |
| AGAAATTCACGGTGGGAATG+TGG | 0.576328 | 8.4:-66600950 | MS.gene056801:CDS |
| TACAGCCAATGGCCATACTT+GGG | 0.577673 | 8.4:+66598900 | None:intergenic |
| GTGGGATCATCATACATGCT+AGG | 0.577985 | 8.4:+66599201 | None:intergenic |
| TTGTTGTTGACGGGAAAGGT+GGG | 0.578023 | 8.4:-66601275 | MS.gene056801:CDS |
| CATCGGCTCGCATCTGCGTG+GGG | 0.579313 | 8.4:-66598993 | MS.gene056801:CDS |
| ACTGGAGAGAAGGTTAAGGG+TGG | 0.579796 | 8.4:-66600925 | MS.gene056801:CDS |
| ATCTACAATCTTAGGGAGAG+GGG | 0.580993 | 8.4:-66599171 | MS.gene056801:CDS |
| AATCTACAATCTTAGGGAGA+GGG | 0.581096 | 8.4:-66599172 | MS.gene056801:CDS |
| GGAAAGCTGAGTGAGGGTAA+TGG | 0.581453 | 8.4:-66600778 | MS.gene056801:CDS |
| CCGGTATTGGATTTGTCTGG+TGG | 0.582583 | 8.4:-66600607 | MS.gene056801:CDS |
| AAGTTATAGTAGATGGGCAT+CGG | 0.582631 | 8.4:-66599010 | MS.gene056801:CDS |
| TACCATAGCAGGCATACACT+TGG | 0.584083 | 8.4:-66598517 | MS.gene056801:CDS |
| AACATTTCCTAACAAGAGCA+GGG | 0.584542 | 8.4:-66598590 | MS.gene056801:CDS |
| CGACCTTATCGAAACGCCAA+TGG | 0.585564 | 8.4:+66598725 | None:intergenic |
| CTCACTCAGCTTTCCAACAT+CGG | 0.585605 | 8.4:+66600786 | None:intergenic |
| CGATGCTTGAAAAGCCAAAG+TGG | 0.585926 | 8.4:-66600477 | MS.gene056801:CDS |
| ATGGAGGGAAAATAACTGTA+GGG | 0.586968 | 8.4:-66600726 | MS.gene056801:CDS |
| GTTCATATCCTCTCTTTGGA+GGG | 0.587128 | 8.4:+66598635 | None:intergenic |
| TCGAAAGGGATCCTATAGGA+AGG | 0.587509 | 8.4:-66598858 | MS.gene056801:CDS |
| TTGATGAGTCTGGTTTGATG+GGG | 0.588528 | 8.4:-66601101 | MS.gene056801:CDS |
| GGGTCAGGGTGGGAATGTGG+TGG | 0.588589 | 8.4:-66601049 | MS.gene056801:CDS |
| GAATGTGGTAACTGGAGAGA+AGG | 0.588966 | 8.4:-66600935 | MS.gene056801:CDS |
| TTTCACAGCACGACGACTTG+TGG | 0.590229 | 8.4:+66599056 | None:intergenic |
| GAAAGGGATCCTATAGGAAG+GGG | 0.590844 | 8.4:-66598856 | MS.gene056801:CDS |
| ATCCTGAAAGCGATACTAAG+TGG | 0.591141 | 8.4:-66598930 | MS.gene056801:CDS |
| GGAATCAAGAAATCCTACAT+CGG | 0.595001 | 8.4:+66600840 | None:intergenic |
| CGAAAGGGATCCTATAGGAA+GGG | 0.595912 | 8.4:-66598857 | MS.gene056801:CDS |
| AGTTGTTGTCGGGTCAGGGT+GGG | 0.598266 | 8.4:-66601059 | MS.gene056801:CDS |
| GGCATCGGCTCGCATCTGCG+TGG | 0.600636 | 8.4:-66598995 | MS.gene056801:CDS |
| GTAATCAGGAGGCTTGGAAG+CGG | 0.600886 | 8.4:-66600444 | MS.gene056801:CDS |
| GAGTCTGGATTGCTGAATGT+TGG | 0.602152 | 8.4:-66600667 | MS.gene056801:CDS |
| AGATTGTAGATTGTCGGAGT+GGG | 0.602178 | 8.4:+66599183 | None:intergenic |
| CACCAAGTGTATGCCTGCTA+TGG | 0.604240 | 8.4:+66598515 | None:intergenic |
| ATTCCAGAATGATGAATCGA+GGG | 0.604352 | 8.4:-66600822 | MS.gene056801:CDS |
| GCTTGAAAAGCCAAAGTGGA+GGG | 0.605147 | 8.4:-66600473 | MS.gene056801:CDS |
| TAGTCTTAAGAGGAAGAGAG+AGG | 0.607309 | 8.4:-66600569 | MS.gene056801:CDS |
| CATTGGCGTTTCGATAAGGT+CGG | 0.607511 | 8.4:-66598724 | MS.gene056801:CDS |
| AGTGGGGAGAAAGAAATTCA+CGG | 0.609700 | 8.4:-66600961 | MS.gene056801:CDS |
| CGATGTTGGAAAGCTGAGTG+AGG | 0.609819 | 8.4:-66600785 | MS.gene056801:CDS |
| TAGGCGAAGGAGATTTGGAC+GGG | 0.612279 | 8.4:-66599080 | MS.gene056801:CDS |
| AGTGCGAATTTCGAGTCTAG+TGG | 0.613148 | 8.4:-66600979 | MS.gene056801:CDS |
| TGCTTGAAAAGCCAAAGTGG+AGG | 0.613629 | 8.4:-66600474 | MS.gene056801:CDS |
| GATTCCAGAATGATGAATCG+AGG | 0.616855 | 8.4:-66600823 | MS.gene056801:CDS |
| AGCTAAGCTGGAGTTAGGCG+TGG | 0.617435 | 8.4:-66598755 | MS.gene056801:CDS |
| GATGAAAGTTGGTGATGCTA+AGG | 0.617892 | 8.4:-66601127 | MS.gene056801:CDS |
| CAGCTTTACCCTCCAAAGAG+AGG | 0.627360 | 8.4:-66598643 | MS.gene056801:CDS |
| GGAACAATTTCAGGATCACA+AGG | 0.631056 | 8.4:+66600499 | None:intergenic |
| CAGAATGATGAATCGAGGGA+TGG | 0.631748 | 8.4:-66600818 | MS.gene056801:CDS |
| TCTACAATCTTAGGGAGAGG+GGG | 0.633262 | 8.4:-66599170 | MS.gene056801:CDS |
| ATCAAGCTGAAGTGCCAGAG+TGG | 0.634304 | 8.4:-66598963 | MS.gene056801:CDS |
| TCTTAAGAGGAAGAGAGAGG+AGG | 0.635943 | 8.4:-66600566 | MS.gene056801:CDS |
| CTAGGCGAAGGAGATTTGGA+CGG | 0.640028 | 8.4:-66599081 | MS.gene056801:CDS |
| AAGATTGTAGATTGTCGGAG+TGG | 0.640461 | 8.4:+66599182 | None:intergenic |
| GAGTTGTTGTCGGGTCAGGG+TGG | 0.642746 | 8.4:-66601060 | MS.gene056801:CDS |
| TGAGAATTCGATACAGCCAA+TGG | 0.643809 | 8.4:+66598889 | None:intergenic |
| GGGAGAAAGAAATTCACGGT+GGG | 0.651200 | 8.4:-66600957 | MS.gene056801:CDS |
| GATGTTGGAAAGCTGAGTGA+GGG | 0.661886 | 8.4:-66600784 | MS.gene056801:CDS |
| TGCGAATTTCGAGTCTAGTG+GGG | 0.671840 | 8.4:-66600977 | MS.gene056801:CDS |
| TGTGGCTTAGGTGTTAACGT+TGG | 0.673988 | 8.4:-66601204 | MS.gene056801:CDS |
| AGGGGAAGACAGGATTCATG+CGG | 0.683109 | 8.4:-66598838 | MS.gene056801:CDS |
| AATGTTGGCGAGAATCATGA+TGG | 0.684957 | 8.4:-66600652 | MS.gene056801:CDS |
| TGGAGCTGATGGTGCTAACG+AGG | 0.694652 | 8.4:-66601007 | MS.gene056801:CDS |
| GCTGGAGAGAAGGTTAAGGG+TGG | 0.695646 | 8.4:-66601027 | MS.gene056801:CDS |
| TGGAGTTGATGGTGCTAACG+AGG | 0.697135 | 8.4:-66600905 | MS.gene056801:CDS |
| GCGTCTGATTTGGTGAAGAG+CGG | 0.702691 | 8.4:-66600691 | MS.gene056801:CDS |
| GAGGGCTTACAGTAATCAGG+AGG | 0.703144 | 8.4:-66600455 | MS.gene056801:CDS |
| AGGATCACAAGGGTTACTCG+CGG | 0.705433 | 8.4:+66600510 | None:intergenic |
| GAACAATTTCAGGATCACAA+GGG | 0.713883 | 8.4:+66600500 | None:intergenic |
| AATAACTGTAGGGACAACTG+AGG | 0.724458 | 8.4:-66600716 | MS.gene056801:CDS |
| GGGGAGAAAGAAATTCACGG+TGG | 0.772176 | 8.4:-66600958 | MS.gene056801:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTAAAGCAATTTAAGTT+TGG | + | chr8.4:66599452-66599471 | None:intergenic | 15.0% |
| !! | ACAAAATTAAATCATGATGA+AGG | + | chr8.4:66599957-66599976 | None:intergenic | 20.0% |
| !! | ATGACTTATTAAATTTCATG+TGG | - | chr8.4:66599830-66599849 | MS.gene056801:intron | 20.0% |
| !! | TGACTTATTAAATTTCATGT+GGG | - | chr8.4:66599831-66599850 | MS.gene056801:intron | 20.0% |
| !! | TTTCATGTGTAAATGATAAT+TGG | - | chr8.4:66599650-66599669 | MS.gene056801:intron | 20.0% |
| !!! | AACCATGCTTTAAATAAAAA+GGG | + | chr8.4:66600298-66600317 | None:intergenic | 20.0% |
| !!! | CGTATTTTTTAGAGTAATAA+AGG | - | chr8.4:66600424-66600443 | MS.gene056801:CDS | 20.0% |
| !!! | GTTTTTAGTTAGTTAATGTT+GGG | - | chr8.4:66600161-66600180 | MS.gene056801:intron | 20.0% |
| !!! | TAACCATGCTTTAAATAAAA+AGG | + | chr8.4:66600299-66600318 | None:intergenic | 20.0% |
| !!! | TCTTATTTTGAGCAAATAAT+TGG | - | chr8.4:66599682-66599701 | MS.gene056801:intron | 20.0% |
| !!! | TGTTGTTGTTATATTAAAAG+TGG | - | chr8.4:66600245-66600264 | MS.gene056801:intron | 20.0% |
| !!! | TGTTTTTAGTTAGTTAATGT+TGG | - | chr8.4:66600160-66600179 | MS.gene056801:intron | 20.0% |
| ! | AACAGTTGACATTAAAACTT+GGG | + | chr8.4:66599753-66599772 | None:intergenic | 25.0% |
| ! | AAGTATCTAAATTGAATTGC+AGG | - | chr8.4:66600386-66600405 | MS.gene056801:CDS | 25.0% |
| ! | AATAACACACCTTAATAGTA+AGG | + | chr8.4:66600226-66600245 | None:intergenic | 25.0% |
| ! | AGTAATAAAGGTTTATTAGC+TGG | - | chr8.4:66600436-66600455 | MS.gene056801:CDS | 25.0% |
| ! | ATGGTTAACTTATGCATTTA+TGG | - | chr8.4:66600312-66600331 | MS.gene056801:intron | 25.0% |
| ! | ATTCAGTTTCCTTACTATTA+AGG | - | chr8.4:66600214-66600233 | MS.gene056801:intron | 25.0% |
| ! | GAAATTTAATAAGTCATCAG+TGG | + | chr8.4:66599827-66599846 | None:intergenic | 25.0% |
| ! | GCTTGAAATTTAGTAAACTT+GGG | - | chr8.4:66599493-66599512 | MS.gene056801:intron | 25.0% |
| ! | GTTAATGCAAAAGGAAATTT+AGG | + | chr8.4:66600507-66600526 | None:intergenic | 25.0% |
| ! | TAACAGTTGACATTAAAACT+TGG | + | chr8.4:66599754-66599773 | None:intergenic | 25.0% |
| ! | TGCTTGAAATTTAGTAAACT+TGG | - | chr8.4:66599492-66599511 | MS.gene056801:intron | 25.0% |
| ! | TGGTTAACTTATGCATTTAT+GGG | - | chr8.4:66600313-66600332 | MS.gene056801:intron | 25.0% |
| ! | TTGTTATATTAAAAGTGGCA+AGG | - | chr8.4:66600250-66600269 | MS.gene056801:intron | 25.0% |
| !! | GAGATATTGTCATAGTATTT+TGG | - | chr8.4:66600093-66600112 | MS.gene056801:intron | 25.0% |
| !! | TGCAAAATTATACAAGGTTT+TGG | + | chr8.4:66600531-66600550 | None:intergenic | 25.0% |
| !!! | AATATCTCAGCGTTTTTTTT+CGG | + | chr8.4:66600081-66600100 | None:intergenic | 25.0% |
| AAATGTTCATATCCTCTCTT+TGG | + | chr8.4:66601140-66601159 | None:intergenic | 30.0% | |
| AATGTATGCTATCCCAAAAA+GGG | + | chr8.4:66600339-66600358 | None:intergenic | 30.0% | |
| ACGATCAAGTTATAGTAGAT+GGG | - | chr8.4:66600752-66600771 | MS.gene056801:CDS | 30.0% | |
| ATGCTAATGTGATGTGTATT+TGG | - | chr8.4:66600009-66600028 | MS.gene056801:intron | 30.0% | |
| ATTCTCAATTTCTTGTCGAA+AGG | - | chr8.4:66600895-66600914 | MS.gene056801:CDS | 30.0% | |
| TAAATAAAAAGGGCCCATTA+TGG | + | chr8.4:66600288-66600307 | None:intergenic | 30.0% | |
| TATCGGTGATAATATTGTTC+CGG | - | chr8.4:66599142-66599161 | MS.gene056801:CDS | 30.0% | |
| TCTGTTTGATATGATGAGTT+GGG | - | chr8.4:66599226-66599245 | MS.gene056801:intron | 30.0% | |
| TGACTCTGCAAAATTATACA+AGG | + | chr8.4:66600537-66600556 | None:intergenic | 30.0% | |
| TGATAATATTGTTCCGGTAT+TGG | - | chr8.4:66599148-66599167 | MS.gene056801:CDS | 30.0% | |
| TGCTAATGTGATGTGTATTT+GGG | - | chr8.4:66600010-66600029 | MS.gene056801:intron | 30.0% | |
| TTCTCAATTTCTTGTCGAAA+GGG | - | chr8.4:66600896-66600915 | MS.gene056801:CDS | 30.0% | |
| ! | CAATTTAAGTTTGGCTAACT+CGG | + | chr8.4:66599443-66599462 | None:intergenic | 30.0% |
| ! | GAAGTAGTTGAAGATTTTGA+TGG | - | chr8.4:66599023-66599042 | MS.gene056801:CDS | 30.0% |
| ! | TGTAATTGTTCTGTTTCTCA+AGG | - | chr8.4:66599618-66599637 | MS.gene056801:intron | 30.0% |
| !! | ACAGTTTCATTTAGTTTGCT+GGG | - | chr8.4:66599773-66599792 | MS.gene056801:intron | 30.0% |
| !! | TACAGTTTCATTTAGTTTGC+TGG | - | chr8.4:66599772-66599791 | MS.gene056801:intron | 30.0% |
| !! | TAGTTGAAGATTTTGATGGA+GGG | - | chr8.4:66599027-66599046 | MS.gene056801:CDS | 30.0% |
| !! | TCTGATTTGAAGAAGCTTTT+TGG | - | chr8.4:66601305-66601324 | MS.gene056801:CDS | 30.0% |
| !!! | TAGCTTTTTTCTCAGAAATG+TGG | + | chr8.4:66600992-66601011 | None:intergenic | 30.0% |
| AAACATTTCCTAACAAGAGC+AGG | - | chr8.4:66601177-66601196 | MS.gene056801:CDS | 35.0% | |
| AAAGCGATACTAAGTGGTTT+GGG | - | chr8.4:66600844-66600863 | MS.gene056801:CDS | 35.0% | |
| AACATTTCCTAACAAGAGCA+GGG | - | chr8.4:66601178-66601197 | MS.gene056801:CDS | 35.0% | |
| AAGTTATAGTAGATGGGCAT+CGG | - | chr8.4:66600758-66600777 | MS.gene056801:CDS | 35.0% | |
| AATCTACAATCTTAGGGAGA+GGG | - | chr8.4:66600596-66600615 | MS.gene056801:CDS | 35.0% | |
| AATGTGATGTGTATTTGGGT+GGG | - | chr8.4:66600014-66600033 | MS.gene056801:intron | 35.0% | |
| AGAGAGGATATGAACATTTC+TGG | - | chr8.4:66601141-66601160 | MS.gene056801:CDS | 35.0% | |
| ATGGAGGGAAAATAACTGTA+GGG | - | chr8.4:66599042-66599061 | MS.gene056801:CDS | 35.0% | |
| ATTCCAGAATGATGAATCGA+GGG | - | chr8.4:66598946-66598965 | MS.gene056801:CDS | 35.0% | |
| CAATGTATGCTATCCCAAAA+AGG | + | chr8.4:66600340-66600359 | None:intergenic | 35.0% | |
| CTCTGTTTGATATGATGAGT+TGG | - | chr8.4:66599225-66599244 | MS.gene056801:intron | 35.0% | |
| GAAAAAAGCTAAAGCTAAGC+TGG | - | chr8.4:66601001-66601020 | MS.gene056801:CDS | 35.0% | |
| GAACAATTTCAGGATCACAA+GGG | + | chr8.4:66599271-66599290 | None:intergenic | 35.0% | |
| GAATCAAGAAATCCTACATC+GGG | + | chr8.4:66598930-66598949 | None:intergenic | 35.0% | |
| GACGATCAAGTTATAGTAGA+TGG | - | chr8.4:66600751-66600770 | MS.gene056801:CDS | 35.0% | |
| GAGAGGATATGAACATTTCT+GGG | - | chr8.4:66601142-66601161 | MS.gene056801:CDS | 35.0% | |
| GCAAACATTCTCACCATAAT+GGG | - | chr8.4:66600272-66600291 | MS.gene056801:intron | 35.0% | |
| GGAATCAAGAAATCCTACAT+CGG | + | chr8.4:66598931-66598950 | None:intergenic | 35.0% | |
| TAATGTGATGTGTATTTGGG+TGG | - | chr8.4:66600013-66600032 | MS.gene056801:intron | 35.0% | |
| TCCCTAAGATTGTAGATTGT+CGG | + | chr8.4:66600594-66600613 | None:intergenic | 35.0% | |
| TCCGACAATCTACAATCTTA+GGG | - | chr8.4:66600590-66600609 | MS.gene056801:CDS | 35.0% | |
| TTAGTATCGCTTTCAGGATT+CGG | + | chr8.4:66600837-66600856 | None:intergenic | 35.0% | |
| ! | AAGCTGTTGATTGTTGTTGA+CGG | - | chr8.4:66598483-66598502 | MS.gene056801:CDS | 35.0% |
| ! | ACTTGTCAGTTTTTCATGTG+GGG | - | chr8.4:66599857-66599876 | MS.gene056801:intron | 35.0% |
| ! | CACTTGTCAGTTTTTCATGT+GGG | - | chr8.4:66599856-66599875 | MS.gene056801:intron | 35.0% |
| ! | GAGAATCATGATGGTGATAT+CGG | - | chr8.4:66599125-66599144 | MS.gene056801:CDS | 35.0% |
| ! | GCATTTGTTAGTTGTTACTG+TGG | - | chr8.4:66599707-66599726 | MS.gene056801:intron | 35.0% |
| ! | TTTGATGAGTCTGGTTTGAT+GGG | - | chr8.4:66598666-66598685 | MS.gene056801:CDS | 35.0% |
| !! | AAGAGTGTGAATTTTGAGTC+TGG | - | chr8.4:66598888-66598907 | MS.gene056801:CDS | 35.0% |
| !! | AGTTTCATTTAGTTTGCTGG+GGG | - | chr8.4:66599775-66599794 | MS.gene056801:intron | 35.0% |
| !! | CAGTTTCATTTAGTTTGCTG+GGG | - | chr8.4:66599774-66599793 | MS.gene056801:intron | 35.0% |
| !! | GGCCCTTTTTATTTAAAGCA+TGG | - | chr8.4:66600293-66600312 | MS.gene056801:intron | 35.0% |
| !! | GTAGTTGAAGATTTTGATGG+AGG | - | chr8.4:66599026-66599045 | MS.gene056801:CDS | 35.0% |
| !!! | GGTTTTGGTGTTAATGCAAA+AGG | + | chr8.4:66600516-66600535 | None:intergenic | 35.0% |
| AAAGTTTCCCTGCTCTTGTT+AGG | + | chr8.4:66601188-66601207 | None:intergenic | 40.0% | |
| AACCACTTAGTATCGCTTTC+AGG | + | chr8.4:66600843-66600862 | None:intergenic | 40.0% | |
| AAGATTGTAGATTGTCGGAG+TGG | + | chr8.4:66600589-66600608 | None:intergenic | 40.0% | |
| AATAACTGTAGGGACAACTG+AGG | - | chr8.4:66599052-66599071 | MS.gene056801:CDS | 40.0% | |
| AATGTTGGCGAGAATCATGA+TGG | - | chr8.4:66599116-66599135 | MS.gene056801:CDS | 40.0% | |
| AGATTGTAGATTGTCGGAGT+GGG | + | chr8.4:66600588-66600607 | None:intergenic | 40.0% | |
| AGTGGGGAGAAAGAAATTCA+CGG | - | chr8.4:66598807-66598826 | MS.gene056801:CDS | 40.0% | |
| ATAAGGTCGGTGAAGATGTT+CGG | - | chr8.4:66601057-66601076 | MS.gene056801:CDS | 40.0% | |
| ATCCTGAAAGCGATACTAAG+TGG | - | chr8.4:66600838-66600857 | MS.gene056801:CDS | 40.0% | |
| ATCTACAATCTTAGGGAGAG+GGG | - | chr8.4:66600597-66600616 | MS.gene056801:CDS | 40.0% | |
| ATGAAGACGAGAAAAGGTTC+AGG | - | chr8.4:66601093-66601112 | MS.gene056801:CDS | 40.0% | |
| ATGTGATGTGTATTTGGGTG+GGG | - | chr8.4:66600015-66600034 | MS.gene056801:intron | 40.0% | |
| ATTTGGGTGGGGAAAATTGT+TGG | - | chr8.4:66600026-66600045 | MS.gene056801:intron | 40.0% | |
| CAATCTACAATCTTAGGGAG+AGG | - | chr8.4:66600595-66600614 | MS.gene056801:CDS | 40.0% | |
| CATTGAACAGCAAAATTGGC+AGG | - | chr8.4:66599391-66599410 | MS.gene056801:intron | 40.0% | |
| CCACATGAAAAACTGACAAG+TGG | + | chr8.4:66599858-66599877 | None:intergenic | 40.0% | |
| CTCCGACAATCTACAATCTT+AGG | - | chr8.4:66600589-66600608 | MS.gene056801:CDS | 40.0% | |
| GAAAGCGATACTAAGTGGTT+TGG | - | chr8.4:66600843-66600862 | MS.gene056801:CDS | 40.0% | |
| GATGGAGGGAAAATAACTGT+AGG | - | chr8.4:66599041-66599060 | MS.gene056801:CDS | 40.0% | |
| GATTCCAGAATGATGAATCG+AGG | - | chr8.4:66598945-66598964 | MS.gene056801:CDS | 40.0% | |
| GGAACAATTTCAGGATCACA+AGG | + | chr8.4:66599272-66599291 | None:intergenic | 40.0% | |
| GGCAAACATTCTCACCATAA+TGG | - | chr8.4:66600271-66600290 | MS.gene056801:intron | 40.0% | |
| GTAACTGGAGAGAAGGTTAA+GGG | - | chr8.4:66598840-66598859 | MS.gene056801:CDS | 40.0% | |
| GTTCATATCCTCTCTTTGGA+GGG | + | chr8.4:66601136-66601155 | None:intergenic | 40.0% | |
| TGAAGACGAGAAAAGGTTCA+GGG | - | chr8.4:66601094-66601113 | MS.gene056801:CDS | 40.0% | |
| TGAGAATTCGATACAGCCAA+TGG | + | chr8.4:66600882-66600901 | None:intergenic | 40.0% | |
| TGAGGTGAATGAGTTGTTGT+CGG | - | chr8.4:66598698-66598717 | MS.gene056801:CDS | 40.0% | |
| TGTTCATATCCTCTCTTTGG+AGG | + | chr8.4:66601137-66601156 | None:intergenic | 40.0% | |
| TTACCATTGGCGTTTCGATA+AGG | - | chr8.4:66601040-66601059 | MS.gene056801:CDS | 40.0% | |
| ! | AGCTGTTGATTGTTGTTGAC+GGG | - | chr8.4:66598484-66598503 | MS.gene056801:CDS | 40.0% |
| ! | ATGCATTTATGGGCCCTTTT+TGG | - | chr8.4:66600323-66600342 | MS.gene056801:intron | 40.0% |
| ! | CCACTTGTCAGTTTTTCATG+TGG | - | chr8.4:66599855-66599874 | MS.gene056801:intron | 40.0% |
| ! | GTTTGATGAGTCTGGTTTGA+TGG | - | chr8.4:66598665-66598684 | MS.gene056801:CDS | 40.0% |
| ! | TAGTCTTAAGAGGAAGAGAG+AGG | - | chr8.4:66599199-66599218 | MS.gene056801:CDS | 40.0% |
| ! | TGAAGAAGCTTTTTGGACGT+CGG | - | chr8.4:66601312-66601331 | MS.gene056801:CDS | 40.0% |
| ! | TGCATTTATGGGCCCTTTTT+GGG | - | chr8.4:66600324-66600343 | MS.gene056801:intron | 40.0% |
| ! | TGTTTGTGATGGTGAGTTGT+GGG | - | chr8.4:66598524-66598543 | MS.gene056801:CDS | 40.0% |
| ! | TTGATGAGTCTGGTTTGATG+GGG | - | chr8.4:66598667-66598686 | MS.gene056801:CDS | 40.0% |
| ! | TTGATTGTTGTTGACGGGAA+AGG | - | chr8.4:66598489-66598508 | MS.gene056801:CDS | 40.0% |
| !! | AGTGTGAATTTTGAGTCTGG+TGG | - | chr8.4:66598891-66598910 | MS.gene056801:CDS | 40.0% |
| !! | CGAGCATTGAACAGCAAAAT+TGG | - | chr8.4:66599387-66599406 | MS.gene056801:intron | 40.0% |
| !! | GAAGTGGTTCTAGTCTTAAG+AGG | - | chr8.4:66599189-66599208 | MS.gene056801:CDS | 40.0% |
| !! | GATAGCATACATTGACTTGC+AGG | - | chr8.4:66600346-66600365 | MS.gene056801:intron | 40.0% |
| !! | GATGAAAGTTGGTGATGCTA+AGG | - | chr8.4:66598641-66598660 | MS.gene056801:CDS | 40.0% |
| !! | GTGTGAATTTTGAGTCTGGT+GGG | - | chr8.4:66598892-66598911 | MS.gene056801:CDS | 40.0% |
| !! | GTTTCATTTAGTTTGCTGGG+GGG | - | chr8.4:66599776-66599795 | MS.gene056801:intron | 40.0% |
| !! | TCAAGCATCGGAACAATTTC+AGG | + | chr8.4:66599281-66599300 | None:intergenic | 40.0% |
| !! | TGTGAATTTTGAGTCTGGTG+GGG | - | chr8.4:66598893-66598912 | MS.gene056801:CDS | 40.0% |
| !!! | CACTTTGGCTTTTCAAGCAT+CGG | + | chr8.4:66599293-66599312 | None:intergenic | 40.0% |
| AACGCAAAGCATACCATAGC+AGG | - | chr8.4:66601240-66601259 | MS.gene056801:CDS | 45.0% | |
| AACTGAGGATGCGTCTGATT+TGG | - | chr8.4:66599067-66599086 | MS.gene056801:CDS | 45.0% | |
| AAGGTTAAGGGTGGAGTTGA+TGG | - | chr8.4:66598852-66598871 | MS.gene056801:CDS | 45.0% | |
| AATGAGTTGTTGTCGGGTCA+GGG | - | chr8.4:66598705-66598724 | MS.gene056801:CDS | 45.0% | |
| AGAAATTCACGGTGGGAATG+TGG | - | chr8.4:66598818-66598837 | MS.gene056801:CDS | 45.0% | |
| ATACAGCCAATGGCCATACT+TGG | + | chr8.4:66600872-66600891 | None:intergenic | 45.0% | |
| ATGGTCAGTGATACCGATGT+TGG | - | chr8.4:66598969-66598988 | MS.gene056801:CDS | 45.0% | |
| CAGAATGATGAATCGAGGGA+TGG | - | chr8.4:66598950-66598969 | MS.gene056801:CDS | 45.0% | |
| CATCCCTCGATTCATCATTC+TGG | + | chr8.4:66598952-66598971 | None:intergenic | 45.0% | |
| CATTGGCGTTTCGATAAGGT+CGG | - | chr8.4:66601044-66601063 | MS.gene056801:CDS | 45.0% | |
| CCACCAGACAAATCCAATAC+CGG | + | chr8.4:66599164-66599183 | None:intergenic | 45.0% | |
| CGAAAGGGATCCTATAGGAA+GGG | - | chr8.4:66600911-66600930 | MS.gene056801:CDS | 45.0% | |
| CGATGCTTGAAAAGCCAAAG+TGG | - | chr8.4:66599291-66599310 | MS.gene056801:intron | 45.0% | |
| CTCACTCAGCTTTCCAACAT+CGG | + | chr8.4:66598985-66599004 | None:intergenic | 45.0% | |
| CTGACACATTCAACAGAACC+TGG | + | chr8.4:66600966-66600985 | None:intergenic | 45.0% | |
| CTTACAGTAATCAGGAGGCT+TGG | - | chr8.4:66599318-66599337 | MS.gene056801:intron | 45.0% | |
| CTTGTCGAAAGGGATCCTAT+AGG | - | chr8.4:66600906-66600925 | MS.gene056801:CDS | 45.0% | |
| GAAAGGGATCCTATAGGAAG+GGG | - | chr8.4:66600912-66600931 | MS.gene056801:CDS | 45.0% | |
| GAATGTGGTAACTGGAGAGA+AGG | - | chr8.4:66598833-66598852 | MS.gene056801:CDS | 45.0% | |
| GAGGTGAATGAGTTGTTGTC+GGG | - | chr8.4:66598699-66598718 | MS.gene056801:CDS | 45.0% | |
| GAGTCGTGTGTGATGAAAGT+TGG | - | chr8.4:66598630-66598649 | MS.gene056801:CDS | 45.0% | |
| GAGTCTGGATTGCTGAATGT+TGG | - | chr8.4:66599101-66599120 | MS.gene056801:CDS | 45.0% | |
| GATGTTGGAAAGCTGAGTGA+GGG | - | chr8.4:66598984-66599003 | MS.gene056801:CDS | 45.0% | |
| GCTAAAGCTAAGCTGGAGTT+AGG | - | chr8.4:66601008-66601027 | MS.gene056801:CDS | 45.0% | |
| GCTTGAAAAGCCAAAGTGGA+GGG | - | chr8.4:66599295-66599314 | MS.gene056801:intron | 45.0% | |
| GGACAGATGAAGACGAGAAA+AGG | - | chr8.4:66601087-66601106 | MS.gene056801:CDS | 45.0% | |
| GGGAGAAAGAAATTCACGGT+GGG | - | chr8.4:66598811-66598830 | MS.gene056801:CDS | 45.0% | |
| GGTAACTGGAGAGAAGGTTA+AGG | - | chr8.4:66598839-66598858 | MS.gene056801:CDS | 45.0% | |
| GTGAAAGAAGTTCCCGATGT+AGG | - | chr8.4:66598915-66598934 | MS.gene056801:CDS | 45.0% | |
| GTGAAGATGTTCGGAATTCG+TGG | - | chr8.4:66601066-66601085 | MS.gene056801:CDS | 45.0% | |
| GTGGGATCATCATACATGCT+AGG | + | chr8.4:66600570-66600589 | None:intergenic | 45.0% | |
| TACAGCCAATGGCCATACTT+GGG | + | chr8.4:66600871-66600890 | None:intergenic | 45.0% | |
| TACCATAGCAGGCATACACT+TGG | - | chr8.4:66601251-66601270 | MS.gene056801:CDS | 45.0% | |
| TATGGTATGCTTTGCGTTGC+AGG | + | chr8.4:66601238-66601257 | None:intergenic | 45.0% | |
| TCGAAAGGGATCCTATAGGA+AGG | - | chr8.4:66600910-66600929 | MS.gene056801:CDS | 45.0% | |
| TCGTCAAGTTCATCTGTGCT+AGG | - | chr8.4:66600669-66600688 | MS.gene056801:CDS | 45.0% | |
| TCTACAATCTTAGGGAGAGG+GGG | - | chr8.4:66600598-66600617 | MS.gene056801:CDS | 45.0% | |
| TCTTAAGAGGAAGAGAGAGG+AGG | - | chr8.4:66599202-66599221 | MS.gene056801:CDS | 45.0% | |
| TGCTTGAAAAGCCAAAGTGG+AGG | - | chr8.4:66599294-66599313 | MS.gene056801:intron | 45.0% | |
| TGTGGCTTAGGTGTTAACGT+TGG | - | chr8.4:66598564-66598583 | MS.gene056801:CDS | 45.0% | |
| TTACTGTAAGCCCTCCACTT+TGG | + | chr8.4:66599308-66599327 | None:intergenic | 45.0% | |
| ! | AAGAAGCTTTTTGGACGTCG+GGG | - | chr8.4:66601314-66601333 | MS.gene056801:CDS | 45.0% |
| ! | AGTGCGAATTTCGAGTCTAG+TGG | - | chr8.4:66598789-66598808 | MS.gene056801:CDS | 45.0% |
| ! | ATTGTTGTTGACGGGAAAGG+TGG | - | chr8.4:66598492-66598511 | MS.gene056801:CDS | 45.0% |
| ! | CTGTTTGTGATGGTGAGTTG+TGG | - | chr8.4:66598523-66598542 | MS.gene056801:CDS | 45.0% |
| ! | GAAGAAGCTTTTTGGACGTC+GGG | - | chr8.4:66601313-66601332 | MS.gene056801:CDS | 45.0% |
| ! | GATTTGGTTGGGGAAGAATG+TGG | - | chr8.4:66598546-66598565 | MS.gene056801:CDS | 45.0% |
| ! | GCTAAGGTGTTTGATGAGTC+TGG | - | chr8.4:66598657-66598676 | MS.gene056801:CDS | 45.0% |
| ! | GGGTTTGATGCTGTTTGTGA+TGG | - | chr8.4:66598513-66598532 | MS.gene056801:CDS | 45.0% |
| ! | GTCTGGTTTGATGGGGTTTA+AGG | - | chr8.4:66598674-66598693 | MS.gene056801:CDS | 45.0% |
| ! | GTGAGTTGTGGGATTTGGTT+GGG | - | chr8.4:66598535-66598554 | MS.gene056801:CDS | 45.0% |
| ! | GTGCGAATTTCGAGTCTAGT+GGG | - | chr8.4:66598790-66598809 | MS.gene056801:CDS | 45.0% |
| ! | GTTCCGGTATTGGATTTGTC+TGG | - | chr8.4:66599158-66599177 | MS.gene056801:CDS | 45.0% |
| ! | TAGGCGTGGCTTTTTACCAT+TGG | - | chr8.4:66601027-66601046 | MS.gene056801:CDS | 45.0% |
| ! | TGAGTTGTGGGATTTGGTTG+GGG | - | chr8.4:66598536-66598555 | MS.gene056801:CDS | 45.0% |
| ! | TGATGGTGAGTTGTGGGATT+TGG | - | chr8.4:66598530-66598549 | MS.gene056801:CDS | 45.0% |
| ! | TGCGAATTTCGAGTCTAGTG+GGG | - | chr8.4:66598791-66598810 | MS.gene056801:CDS | 45.0% |
| ! | TTGGATTTGTCTGGTGGTGA+TGG | - | chr8.4:66599167-66599186 | MS.gene056801:CDS | 45.0% |
| ! | TTGTTGTTGACGGGAAAGGT+GGG | - | chr8.4:66598493-66598512 | MS.gene056801:CDS | 45.0% |
| ! | TTTGATGGGGTTTAAGGCTG+AGG | - | chr8.4:66598680-66598699 | MS.gene056801:CDS | 45.0% |
| !! | TGAGGGTAATGGTGATGGAA+TGG | - | chr8.4:66599001-66599020 | MS.gene056801:CDS | 45.0% |
| AAGGTTAAGGGTGGAGCTGA+TGG | - | chr8.4:66598750-66598769 | MS.gene056801:CDS | 50.0% | |
| ACTGGAGAGAAGGTTAAGGG+TGG | - | chr8.4:66598843-66598862 | MS.gene056801:CDS | 50.0% | |
| AGGATCACAAGGGTTACTCG+CGG | + | chr8.4:66599261-66599280 | None:intergenic | 50.0% | |
| AGGGGAAGACAGGATTCATG+CGG | - | chr8.4:66600930-66600949 | MS.gene056801:CDS | 50.0% | |
| AGTTCATCTGTGCTAGGCGA+AGG | - | chr8.4:66600675-66600694 | MS.gene056801:CDS | 50.0% | |
| CAAGTCGTCGTGCTGTGAAA+CGG | - | chr8.4:66600715-66600734 | MS.gene056801:CDS | 50.0% | |
| CACCAAGTGTATGCCTGCTA+TGG | + | chr8.4:66601256-66601275 | None:intergenic | 50.0% | |
| CAGCTTTACCCTCCAAAGAG+AGG | - | chr8.4:66601125-66601144 | MS.gene056801:CDS | 50.0% | |
| CGACCTTATCGAAACGCCAA+TGG | + | chr8.4:66601046-66601065 | None:intergenic | 50.0% | |
| CGATGTTGGAAAGCTGAGTG+AGG | - | chr8.4:66598983-66599002 | MS.gene056801:CDS | 50.0% | |
| CTAGGCGAAGGAGATTTGGA+CGG | - | chr8.4:66600687-66600706 | MS.gene056801:CDS | 50.0% | |
| CTTGACGAGCTTCGTGAAGA+TGG | + | chr8.4:66600657-66600676 | None:intergenic | 50.0% | |
| GAATGAGTTGTTGTCGGGTC+AGG | - | chr8.4:66598704-66598723 | MS.gene056801:CDS | 50.0% | |
| GAGGGCTTACAGTAATCAGG+AGG | - | chr8.4:66599313-66599332 | MS.gene056801:intron | 50.0% | |
| GGAAAGCTGAGTGAGGGTAA+TGG | - | chr8.4:66598990-66599009 | MS.gene056801:CDS | 50.0% | |
| GGGGAGAAAGAAATTCACGG+TGG | - | chr8.4:66598810-66598829 | MS.gene056801:CDS | 50.0% | |
| GTAATCAGGAGGCTTGGAAG+CGG | - | chr8.4:66599324-66599343 | MS.gene056801:intron | 50.0% | |
| GTGGAGGGCTTACAGTAATC+AGG | - | chr8.4:66599310-66599329 | MS.gene056801:intron | 50.0% | |
| GTGGCTGGAGAGAAGGTTAA+GGG | - | chr8.4:66598738-66598757 | MS.gene056801:CDS | 50.0% | |
| GTTGGGGAAGAATGTGGCTT+AGG | - | chr8.4:66598552-66598571 | MS.gene056801:CDS | 50.0% | |
| TAATCAGGAGGCTTGGAAGC+GGG | - | chr8.4:66599325-66599344 | MS.gene056801:intron | 50.0% | |
| TAGGCGAAGGAGATTTGGAC+GGG | - | chr8.4:66600688-66600707 | MS.gene056801:CDS | 50.0% | |
| TCCTATAGGAAGGGGAAGAC+AGG | - | chr8.4:66600920-66600939 | MS.gene056801:CDS | 50.0% | |
| TCCTGTCTTCCCCTTCCTAT+AGG | + | chr8.4:66600924-66600943 | None:intergenic | 50.0% | |
| TGTGCTAGGCGAAGGAGATT+TGG | - | chr8.4:66600683-66600702 | MS.gene056801:CDS | 50.0% | |
| TTTCACAGCACGACGACTTG+TGG | + | chr8.4:66600715-66600734 | None:intergenic | 50.0% | |
| ! | AGTGGTTTGGGACCCAAGTA+TGG | - | chr8.4:66600856-66600875 | MS.gene056801:CDS | 50.0% |
| ! | ATCAAGCTGAAGTGCCAGAG+TGG | - | chr8.4:66600805-66600824 | MS.gene056801:CDS | 50.0% |
| ! | CCGGTATTGGATTTGTCTGG+TGG | - | chr8.4:66599161-66599180 | MS.gene056801:CDS | 50.0% |
| ! | CTGAGTGAGGGTAATGGTGA+TGG | - | chr8.4:66598996-66599015 | MS.gene056801:CDS | 50.0% |
| ! | GGTGAGTTGTGGGATTTGGT+TGG | - | chr8.4:66598534-66598553 | MS.gene056801:CDS | 50.0% |
| !! | GCGTCTGATTTGGTGAAGAG+CGG | - | chr8.4:66599077-66599096 | MS.gene056801:CDS | 50.0% |
| !! | TGGAGTTGATGGTGCTAACG+AGG | - | chr8.4:66598863-66598882 | MS.gene056801:CDS | 50.0% |
| !! | TTGTCTGGTGGTGATGGAAG+TGG | - | chr8.4:66599173-66599192 | MS.gene056801:CDS | 50.0% |
| AGCTAAGCTGGAGTTAGGCG+TGG | - | chr8.4:66601013-66601032 | MS.gene056801:CDS | 55.0% | |
| AGTTGTTGTCGGGTCAGGGT+GGG | - | chr8.4:66598709-66598728 | MS.gene056801:CDS | 55.0% | |
| CACGGTGGGAATGTGGTAAC+TGG | - | chr8.4:66598825-66598844 | MS.gene056801:CDS | 55.0% | |
| GAATGTGGTGGCTGGAGAGA+AGG | - | chr8.4:66598731-66598750 | MS.gene056801:CDS | 55.0% | |
| GCTGGAGAGAAGGTTAAGGG+TGG | - | chr8.4:66598741-66598760 | MS.gene056801:CDS | 55.0% | |
| GGTGGCTGGAGAGAAGGTTA+AGG | - | chr8.4:66598737-66598756 | MS.gene056801:CDS | 55.0% | |
| TGGGACCCAAGTATGGCCAT+TGG | - | chr8.4:66600863-66600882 | MS.gene056801:CDS | 55.0% | |
| TTGGTGAAGAGCGGTGAGTC+TGG | - | chr8.4:66599086-66599105 | MS.gene056801:CDS | 55.0% | |
| ! | TGGAGCTGATGGTGCTAACG+AGG | - | chr8.4:66598761-66598780 | MS.gene056801:CDS | 55.0% |
| !! | CGTTGGTTCGACGCTGAAAC+TGG | - | chr8.4:66598581-66598600 | MS.gene056801:CDS | 55.0% |
| !! | GCGGGTTCTGTTGTTTCGAG+AGG | - | chr8.4:66599343-66599362 | MS.gene056801:intron | 55.0% |
| GAGTTGTTGTCGGGTCAGGG+TGG | - | chr8.4:66598708-66598727 | MS.gene056801:CDS | 60.0% | |
| GGATTCGGAGCAGTCCACTC+TGG | + | chr8.4:66600822-66600841 | None:intergenic | 60.0% | |
| CAGGGTGGGAATGTGGTGGC+TGG | - | chr8.4:66598723-66598742 | MS.gene056801:CDS | 65.0% | |
| GGGTCAGGGTGGGAATGTGG+TGG | - | chr8.4:66598719-66598738 | MS.gene056801:CDS | 65.0% | |
| GTCGGGTCAGGGTGGGAATG+TGG | - | chr8.4:66598716-66598735 | MS.gene056801:CDS | 65.0% | |
| TCATGCGGCTGCGCAGTTCC+AGG | - | chr8.4:66600945-66600964 | MS.gene056801:CDS | 65.0% | |
| !! | CATCGGCTCGCATCTGCGTG+GGG | - | chr8.4:66600775-66600794 | MS.gene056801:CDS | 65.0% |
| !! | GCATCGGCTCGCATCTGCGT+GGG | - | chr8.4:66600774-66600793 | MS.gene056801:CDS | 65.0% |
| !! | GGCATCGGCTCGCATCTGCG+TGG | - | chr8.4:66600773-66600792 | MS.gene056801:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 66598450 | 66601340 | 66598450 | ID=MS.gene056801 |
| chr8.4 | mRNA | 66598450 | 66601340 | 66598450 | ID=MS.gene056801.t1;Parent=MS.gene056801 |
| chr8.4 | exon | 66600378 | 66601340 | 66600378 | ID=MS.gene056801.t1.exon1;Parent=MS.gene056801.t1 |
| chr8.4 | CDS | 66600378 | 66601340 | 66600378 | ID=cds.MS.gene056801.t1;Parent=MS.gene056801.t1 |
| chr8.4 | exon | 66598450 | 66599238 | 66598450 | ID=MS.gene056801.t1.exon2;Parent=MS.gene056801.t1 |
| chr8.4 | CDS | 66598450 | 66599238 | 66598450 | ID=cds.MS.gene056801.t1;Parent=MS.gene056801.t1 |
| Gene Sequence |
| Protein sequence |
