Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85053.t1 | XP_013455379.1 | 82 | 617 | 74 | 4 | 1 | 580 | 1 | 617 | 6.10E-268 | 933.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85053.t1 | A4FUF0 | 42.4 | 66 | 35 | 1 | 313 | 378 | 10 | 72 | 3.2e-07 | 58.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85053.t1 | A0A072UU80 | 82.0 | 617 | 74 | 4 | 1 | 580 | 1 | 617 | 4.4e-268 | 933.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045233 | MS.gene85053 | PPI |
| MS.gene85053 | MS.gene007196 | PPI |
| MS.gene79130 | MS.gene85053 | PPI |
| MS.gene24697 | MS.gene85053 | PPI |
| MS.gene95527 | MS.gene85053 | PPI |
| MS.gene07741 | MS.gene85053 | PPI |
| MS.gene46640 | MS.gene85053 | PPI |
| MS.gene050299 | MS.gene85053 | PPI |
| MS.gene92710 | MS.gene85053 | PPI |
| MS.gene85053 | MS.gene045235 | PPI |
| MS.gene85053 | MS.gene55120 | PPI |
| MS.gene75575 | MS.gene85053 | PPI |
| MS.gene77911 | MS.gene85053 | PPI |
| MS.gene85053 | MS.gene037044 | PPI |
| MS.gene067033 | MS.gene85053 | PPI |
| MS.gene045232 | MS.gene85053 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85053.t1 | MTR_4g036445 | 82.010 | 617 | 74 | 4 | 1 | 580 | 1 | 617 | 0.0 | 1023 |
| MS.gene85053.t1 | MTR_1g049120 | 57.966 | 954 | 247 | 17 | 15 | 858 | 8 | 917 | 0.0 | 966 |
| MS.gene85053.t1 | MTR_2g047912 | 72.422 | 417 | 87 | 6 | 462 | 860 | 272 | 678 | 0.0 | 589 |
| MS.gene85053.t1 | MTR_2g047912 | 46.056 | 393 | 151 | 12 | 23 | 364 | 13 | 395 | 1.89e-78 | 268 |
| MS.gene85053.t1 | MTR_1g072780 | 45.072 | 690 | 275 | 20 | 247 | 858 | 310 | 973 | 1.43e-156 | 484 |
| MS.gene85053.t1 | MTR_2g104120 | 29.677 | 620 | 327 | 19 | 309 | 860 | 258 | 836 | 5.74e-60 | 219 |
| MS.gene85053.t1 | MTR_1g066890 | 29.180 | 634 | 334 | 21 | 306 | 860 | 315 | 912 | 3.73e-59 | 218 |
| MS.gene85053.t1 | MTR_2g104980 | 57.746 | 71 | 30 | 0 | 309 | 379 | 233 | 303 | 1.43e-23 | 105 |
| MS.gene85053.t1 | MTR_6g005960 | 32.487 | 197 | 97 | 5 | 308 | 470 | 211 | 405 | 4.43e-21 | 99.4 |
| MS.gene85053.t1 | MTR_6g005840 | 32.178 | 202 | 100 | 6 | 308 | 474 | 271 | 470 | 5.71e-21 | 99.4 |
| MS.gene85053.t1 | MTR_6g005840 | 32.178 | 202 | 100 | 6 | 308 | 474 | 229 | 428 | 6.50e-21 | 99.0 |
| MS.gene85053.t1 | MTR_2g013200 | 53.846 | 104 | 19 | 6 | 61 | 162 | 69 | 145 | 9.16e-17 | 78.6 |
| MS.gene85053.t1 | MTR_7g113180 | 33.051 | 118 | 73 | 3 | 309 | 424 | 87 | 200 | 3.94e-14 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85053.t1 | AT3G54760 | 35.714 | 294 | 149 | 5 | 578 | 855 | 473 | 742 | 1.51e-41 | 164 |
| MS.gene85053.t1 | AT3G54760 | 35.714 | 294 | 149 | 5 | 578 | 855 | 504 | 773 | 2.12e-41 | 163 |
| MS.gene85053.t1 | AT3G09670 | 40.104 | 192 | 84 | 2 | 308 | 468 | 196 | 387 | 6.75e-37 | 149 |
| MS.gene85053.t1 | AT3G09670 | 40.104 | 192 | 84 | 2 | 308 | 468 | 196 | 387 | 6.75e-37 | 149 |
| MS.gene85053.t1 | AT5G02950 | 38.333 | 180 | 80 | 2 | 312 | 460 | 98 | 277 | 1.96e-33 | 137 |
| MS.gene85053.t1 | AT5G02950 | 52.564 | 78 | 37 | 0 | 771 | 848 | 546 | 623 | 2.22e-17 | 87.4 |
| MS.gene85053.t1 | AT5G02950 | 38.333 | 180 | 80 | 2 | 312 | 460 | 98 | 277 | 1.96e-33 | 137 |
| MS.gene85053.t1 | AT5G02950 | 52.564 | 78 | 37 | 0 | 771 | 848 | 546 | 623 | 2.22e-17 | 87.4 |
| MS.gene85053.t1 | AT5G40340 | 34.000 | 200 | 86 | 8 | 309 | 469 | 125 | 317 | 1.37e-19 | 95.1 |
| MS.gene85053.t1 | AT5G40340 | 34.000 | 200 | 86 | 8 | 309 | 469 | 125 | 317 | 1.41e-19 | 95.1 |
| MS.gene85053.t1 | AT3G05430 | 35.714 | 98 | 60 | 2 | 309 | 404 | 133 | 229 | 1.02e-13 | 75.9 |
| MS.gene85053.t1 | AT3G05430 | 35.714 | 98 | 60 | 2 | 309 | 404 | 133 | 229 | 1.12e-13 | 75.9 |
| MS.gene85053.t1 | AT5G27650 | 30.508 | 118 | 76 | 3 | 309 | 424 | 171 | 284 | 1.66e-12 | 72.0 |
| MS.gene85053.t1 | AT3G27860 | 25.263 | 285 | 169 | 11 | 280 | 528 | 27 | 303 | 7.43e-12 | 69.7 |
| MS.gene85053.t1 | AT3G27860 | 25.263 | 285 | 169 | 11 | 280 | 528 | 27 | 303 | 7.43e-12 | 69.7 |
Find 181 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTCTCTGATATGGTTT+GGG | 0.192247 | 4.2:+67536446 | MS.gene85053:CDS |
| TGCTATTTCGTTGCGTATTT+TGG | 0.192293 | 4.2:+67536558 | MS.gene85053:CDS |
| GGGTAGTTTCTTCATCTTCT+TGG | 0.215570 | 4.2:-67537690 | None:intergenic |
| AACCAAATGTTTAGGCGTTT+TGG | 0.221752 | 4.2:+67538053 | MS.gene85053:CDS |
| CTCCACAACGTTGTATTTCT+TGG | 0.227035 | 4.2:-67536992 | None:intergenic |
| CCAAATTCATCACTTAAAAT+TGG | 0.236718 | 4.2:+67537377 | MS.gene85053:CDS |
| TACCTTTAACCTCGACAATT+TGG | 0.249114 | 4.2:-67535797 | None:intergenic |
| TTTCTTTCTCTGATATGGTT+TGG | 0.268068 | 4.2:+67536445 | MS.gene85053:CDS |
| GGTGATTCTGTTAAGGGTGC+TGG | 0.281698 | 4.2:+67535363 | MS.gene85053:CDS |
| AACAACTTCATCAACAATAT+TGG | 0.288064 | 4.2:-67535616 | None:intergenic |
| AACCAAATTGTCGAGGTTAA+AGG | 0.311098 | 4.2:+67535795 | MS.gene85053:CDS |
| CTCAGCTGCTTGCATTTAAT+CGG | 0.313345 | 4.2:+67536949 | MS.gene85053:CDS |
| CTCCTTCTCTTGGAATGTTC+AGG | 0.318252 | 4.2:-67537275 | None:intergenic |
| CAATCACCGTCTCGAGAATC+TGG | 0.323985 | 4.2:-67537227 | None:intergenic |
| GCAGGTTTGTCGGCAGCTAT+TGG | 0.362443 | 4.2:+67536099 | MS.gene85053:intron |
| GAAGAAGAATTTAATGAAGC+TGG | 0.362869 | 4.2:+67536306 | MS.gene85053:CDS |
| GCCCAAAACGCCTAAACATT+TGG | 0.373872 | 4.2:-67538055 | None:intergenic |
| TTCACTATTTGCTGAAATGT+TGG | 0.384639 | 4.2:+67535413 | MS.gene85053:CDS |
| GAAAGAATGTGTTTCGGAAC+AGG | 0.385180 | 4.2:+67536257 | MS.gene85053:CDS |
| GTGATTCTGTTAAGGGTGCT+GGG | 0.393629 | 4.2:+67535364 | MS.gene85053:CDS |
| TCGTCATACTCAACAGTTGT+AGG | 0.397359 | 4.2:-67537488 | None:intergenic |
| TTCTGTTGGTGCAGGTTTGT+CGG | 0.398560 | 4.2:+67536089 | MS.gene85053:intron |
| CACATTCCACAGACCCATCT+AGG | 0.400964 | 4.2:-67535311 | None:intergenic |
| CATTTGTGGTGATTCTGTTA+AGG | 0.401846 | 4.2:+67535356 | MS.gene85053:CDS |
| GGTGACTTAACAGCTGGCTT+TGG | 0.403369 | 4.2:-67537869 | None:intergenic |
| ATTTGTGGTGATTCTGTTAA+GGG | 0.407472 | 4.2:+67535357 | MS.gene85053:CDS |
| CTGTAATTGTGGCTGCTGAT+TGG | 0.409494 | 4.2:+67537636 | MS.gene85053:CDS |
| AATAGGGCCTACGGATAACT+TGG | 0.413345 | 4.2:-67537901 | None:intergenic |
| TAGATGGGTCTGTGGAATGT+GGG | 0.413456 | 4.2:+67535313 | MS.gene85053:CDS |
| GAATCTGGAGTCCCGTTCAT+TGG | 0.417684 | 4.2:-67537212 | None:intergenic |
| AAGATATGAGTGACTCGTAT+TGG | 0.417810 | 4.2:+67537747 | MS.gene85053:CDS |
| AAACTACCCATGGCTGGAAC+TGG | 0.419246 | 4.2:+67537704 | MS.gene85053:CDS |
| TGCTATGCATCTGGCAAAGA+AGG | 0.420160 | 4.2:+67537172 | MS.gene85053:CDS |
| CAAACCTTAACCAAATGTTT+AGG | 0.421345 | 4.2:+67538045 | MS.gene85053:CDS |
| ATCGATGGCGCTCCTTCTCT+TGG | 0.422765 | 4.2:-67537285 | None:intergenic |
| CAATATTGTACATGCCGATT+GGG | 0.423790 | 4.2:+67535448 | MS.gene85053:CDS |
| GAAACATCCAATTTATTCTC+AGG | 0.426859 | 4.2:-67537464 | None:intergenic |
| TCAGGTGAAACCAGGTGATC+TGG | 0.428952 | 4.2:-67537257 | None:intergenic |
| CGGATAACTTGGGGTGGCTC+TGG | 0.434795 | 4.2:-67537890 | None:intergenic |
| AACGCCTAAACATTTGGTTA+AGG | 0.435698 | 4.2:-67538049 | None:intergenic |
| TGATATTGAACATGCCGATT+GGG | 0.449657 | 4.2:+67535571 | MS.gene85053:CDS |
| TGTTAAGGGTGCTGGGGCCG+TGG | 0.451359 | 4.2:+67535371 | MS.gene85053:CDS |
| TCAGCAAATAGTGAAGTAAA+CGG | 0.452041 | 4.2:-67535405 | None:intergenic |
| AAAGCGTAAATGTAATTTCA+AGG | 0.454246 | 4.2:+67537148 | MS.gene85053:CDS |
| TAGTTCAGAAATAGTTCATC+AGG | 0.456384 | 4.2:+67536383 | MS.gene85053:CDS |
| ATTGGGAATGATAAAGTTGA+TGG | 0.457044 | 4.2:+67535588 | MS.gene85053:CDS |
| AATCTGGAGTCCCGTTCATT+GGG | 0.457881 | 4.2:-67537211 | None:intergenic |
| AAGAAGAATTTAATGAAGCT+GGG | 0.461918 | 4.2:+67536307 | MS.gene85053:CDS |
| TTTCAAGGATGCTATGCATC+TGG | 0.463938 | 4.2:+67537163 | MS.gene85053:CDS |
| TCAACGACGCCATCTTTCTT+CGG | 0.465009 | 4.2:-67537434 | None:intergenic |
| GGGAAGAGAAAACTAACATA+TGG | 0.465930 | 4.2:+67536327 | MS.gene85053:CDS |
| TCAATATTGTACATGCCGAT+TGG | 0.467023 | 4.2:+67535447 | MS.gene85053:CDS |
| AATCGATCAAGGCCACTGAT+AGG | 0.467316 | 4.2:-67536906 | None:intergenic |
| ATCCATGGCAGAAGCAGTAA+AGG | 0.470963 | 4.2:+67535230 | None:intergenic |
| GGCTCTGGTGACTTAACAGC+TGG | 0.474129 | 4.2:-67537875 | None:intergenic |
| ACCCTTTACTGCTTCTGCCA+TGG | 0.477003 | 4.2:-67535232 | None:intergenic |
| TCGGAACAGGTTGGTTCAGA+TGG | 0.478265 | 4.2:+67536270 | MS.gene85053:CDS |
| ATGATTTCGAAATGCAAACT+AGG | 0.482032 | 4.2:+67537318 | MS.gene85053:CDS |
| ATTCTCGAGACGGTGATTGT+TGG | 0.483757 | 4.2:+67537231 | MS.gene85053:CDS |
| GAACAATCTGATATACTTGA+GGG | 0.485425 | 4.2:+67535720 | MS.gene85053:CDS |
| ATTGTTGATGAAGTTGTTTG+TGG | 0.487188 | 4.2:+67535621 | MS.gene85053:CDS |
| ATTCTTGAAATCAGAGAAGA+AGG | 0.488652 | 4.2:-67537612 | None:intergenic |
| AAAACCTATCCATGGTGGCC+TGG | 0.490876 | 4.2:+67536477 | MS.gene85053:CDS |
| GGATGTCAGACCCAATGAAC+GGG | 0.495541 | 4.2:+67537201 | MS.gene85053:CDS |
| GGTTGGTTCAGATGGTGGTC+AGG | 0.496421 | 4.2:+67536278 | MS.gene85053:CDS |
| CATTGCCATTGTCAATGACC+CGG | 0.497054 | 4.2:-67537775 | None:intergenic |
| AGATGGGTCTGTGGAATGTG+GGG | 0.499368 | 4.2:+67535314 | MS.gene85053:CDS |
| AAACGGGCGCGCTATGGCCA+CGG | 0.505442 | 4.2:-67535388 | None:intergenic |
| TTGTTGGACTCCAGATCACC+TGG | 0.505467 | 4.2:+67537247 | MS.gene85053:CDS |
| ATGTTATCATTCCGCCCAAT+CGG | 0.506004 | 4.2:-67535462 | None:intergenic |
| AAAGCTTTGAACACTGCACT+TGG | 0.506705 | 4.2:-67538230 | None:intergenic |
| CAGCAAATAGTGAAGTAAAC+GGG | 0.508586 | 4.2:-67535404 | None:intergenic |
| TGGAGAGAAAGAATGTGTTT+CGG | 0.508610 | 4.2:+67536251 | MS.gene85053:CDS |
| AGCACTACTGAGAGCTACCT+TGG | 0.511344 | 4.2:-67538153 | None:intergenic |
| AAATTGACAGAGTAAGCAAA+CGG | 0.513129 | 4.2:+67538099 | MS.gene85053:CDS |
| TTGATATTGAACATGCCGAT+TGG | 0.513289 | 4.2:+67535570 | MS.gene85053:CDS |
| TCCCAGTGTTGTCTACAGTC+TGG | 0.514788 | 4.2:-67536779 | None:intergenic |
| GATGTTGGTGAAACCCTAGA+TGG | 0.516405 | 4.2:+67535297 | MS.gene85053:CDS |
| CAACTCATTCCGAAGAAAGA+TGG | 0.517421 | 4.2:+67537425 | MS.gene85053:CDS |
| ATTTCATGCACGGATGAAGT+TGG | 0.517879 | 4.2:+67537665 | MS.gene85053:CDS |
| TGGACAGATATTTGATCCCT+CGG | 0.519248 | 4.2:+67536497 | MS.gene85053:CDS |
| TCTTTCTCTGATATGGTTTG+GGG | 0.522638 | 4.2:+67536447 | MS.gene85053:CDS |
| TGATCCTCAGTATTGACTAC+AGG | 0.526122 | 4.2:-67537086 | None:intergenic |
| AAGTTCATAACAAGCTCAGC+AGG | 0.528013 | 4.2:-67537993 | None:intergenic |
| CACTTGGAGTGTAATTAAGC+TGG | 0.535263 | 4.2:-67538214 | None:intergenic |
| CTAGATGGGTCTGTGGAATG+TGG | 0.536941 | 4.2:+67535312 | MS.gene85053:CDS |
| AATTGGTGACTGTATTCGTA+AGG | 0.537251 | 4.2:+67537394 | MS.gene85053:CDS |
| TTTCAAGAATTCTGTAATTG+TGG | 0.537467 | 4.2:+67537625 | MS.gene85053:CDS |
| TCCATGGCAGAAGCAGTAAA+GGG | 0.539722 | 4.2:+67535231 | None:intergenic |
| CAGAAAAGTATATTCTCCAA+GGG | 0.541983 | 4.2:-67537576 | None:intergenic |
| GAGGGATCAAATATCTGTCC+AGG | 0.543133 | 4.2:-67536495 | None:intergenic |
| TCAGAAAAGTATATTCTCCA+AGG | 0.544625 | 4.2:-67537577 | None:intergenic |
| GTTCATGATGAAGTCATTTG+TGG | 0.546872 | 4.2:+67535342 | MS.gene85053:CDS |
| CTAGGGTTTCACCAACATCA+TGG | 0.546967 | 4.2:-67535293 | None:intergenic |
| ATGAAGAAACTACCCATGGC+TGG | 0.548434 | 4.2:+67537698 | MS.gene85053:CDS |
| GTGACTCGTATTGGACTGAC+CGG | 0.548594 | 4.2:+67537756 | MS.gene85053:CDS |
| TCAAATATGAGGCAAAAGGT+TGG | 0.549132 | 4.2:+67536231 | MS.gene85053:CDS |
| TCAACTTTATCATTCCCAAT+CGG | 0.551031 | 4.2:-67535585 | None:intergenic |
| TCTCAAGCTCTAATCGATCA+AGG | 0.551531 | 4.2:-67536917 | None:intergenic |
| TGAAGTAAACGGGCGCGCTA+TGG | 0.552064 | 4.2:-67535394 | None:intergenic |
| CACCTGAACATTCCAAGAGA+AGG | 0.554732 | 4.2:+67537273 | MS.gene85053:CDS |
| GACTGATATTGTTGATATCG+TGG | 0.556725 | 4.2:+67535536 | MS.gene85053:CDS |
| CTGTCCAGGCCACCATGGAT+AGG | 0.557596 | 4.2:-67536481 | None:intergenic |
| TGATTTCGAAATGCAAACTA+GGG | 0.557624 | 4.2:+67537319 | MS.gene85053:CDS |
| TGCCCGCTCAGATGCATCCG+AGG | 0.557951 | 4.2:-67536514 | None:intergenic |
| GGAGTCAAATATGAGGCAAA+AGG | 0.560804 | 4.2:+67536227 | MS.gene85053:CDS |
| TTGGTGACAGATCATTTGCA+TGG | 0.561671 | 4.2:+67536577 | MS.gene85053:CDS |
| AGTAAGCAAACGGGCAAGAG+TGG | 0.563975 | 4.2:+67538109 | MS.gene85053:CDS |
| TGAACTATTTCTGAACTACC+AGG | 0.564289 | 4.2:-67536378 | None:intergenic |
| ATCAGATCCAGTTCCAGCCA+TGG | 0.566118 | 4.2:-67537711 | None:intergenic |
| TGGAATGTTCAGGTGAAACC+AGG | 0.567728 | 4.2:-67537265 | None:intergenic |
| ACATATTCCATAAGTTTCGT+CGG | 0.569390 | 4.2:-67536864 | None:intergenic |
| TAGGGTTTCACCAACATCAT+GGG | 0.571441 | 4.2:-67535292 | None:intergenic |
| ATTAGAGCTTGAGATTGCTA+AGG | 0.572233 | 4.2:+67536926 | MS.gene85053:CDS |
| TGAACAATCTGATATACTTG+AGG | 0.574331 | 4.2:+67535719 | MS.gene85053:CDS |
| ACACTCAAATTACTGAGCAA+TGG | 0.575379 | 4.2:+67536163 | MS.gene85053:CDS |
| ACATTCCACAGACCCATCTA+GGG | 0.577354 | 4.2:-67535310 | None:intergenic |
| GATGGGTCTGTGGAATGTGG+GGG | 0.577375 | 4.2:+67535315 | MS.gene85053:CDS |
| GAACAGGTTGGTTCAGATGG+TGG | 0.577692 | 4.2:+67536273 | MS.gene85053:CDS |
| CAGAAATAGTTCATCAGGCA+CGG | 0.577908 | 4.2:+67536388 | MS.gene85053:CDS |
| CAAGAAGTGCGTAGATGCCA+AGG | 0.579200 | 4.2:+67538136 | MS.gene85053:CDS |
| GCCAGACTGTAGACAACACT+GGG | 0.580489 | 4.2:+67536778 | MS.gene85053:CDS |
| ATAGGGCCTACGGATAACTT+GGG | 0.580642 | 4.2:-67537900 | None:intergenic |
| AATAAGCATCACACGTGGGG+TGG | 0.581145 | 4.2:+67536812 | MS.gene85053:CDS |
| AAAGATGCACTGGTGAAGCC+TGG | 0.582697 | 4.2:+67536360 | MS.gene85053:CDS |
| AATTGACAGAGTAAGCAAAC+GGG | 0.584588 | 4.2:+67538100 | MS.gene85053:CDS |
| TCCCTCGGATGCATCTGAGC+GGG | 0.587317 | 4.2:+67536512 | MS.gene85053:CDS |
| TGTGCCGTTGCATGATGGAA+TGG | 0.588542 | 4.2:+67536191 | MS.gene85053:CDS |
| ACCATTGTGGCCCATGATGT+TGG | 0.590779 | 4.2:+67535282 | MS.gene85053:CDS |
| AGCCATGTGCCGTTGCATGA+TGG | 0.591067 | 4.2:+67536186 | MS.gene85053:CDS |
| TTCCATCATGCAACGGCACA+TGG | 0.591475 | 4.2:-67536188 | None:intergenic |
| TTGGAAAGAGATTTCATGCA+CGG | 0.592753 | 4.2:+67537655 | MS.gene85053:CDS |
| TGTGTGGCACATAAACCCCT+TGG | 0.592920 | 4.2:+67537560 | MS.gene85053:CDS |
| GAATGAAGCATCTCAGCTGA+AGG | 0.593084 | 4.2:+67536599 | MS.gene85053:CDS |
| GAATGTGTTTCGGAACAGGT+TGG | 0.597469 | 4.2:+67536261 | MS.gene85053:CDS |
| TCGGCGAGGAGTCAAATATG+AGG | 0.599713 | 4.2:+67536220 | MS.gene85053:CDS |
| GTCGGCAGCTATTGGTAGTG+AGG | 0.600055 | 4.2:+67536107 | MS.gene85053:CDS |
| TCAGATCCAGTTCCAGCCAT+GGG | 0.600255 | 4.2:-67537710 | None:intergenic |
| TATTGTACATGCCGATTGGG+CGG | 0.601993 | 4.2:+67535451 | MS.gene85053:CDS |
| AAAAGCTGTAAAAGATGCAC+TGG | 0.604251 | 4.2:+67536350 | MS.gene85053:CDS |
| TAGGGCACATTTCTCCACAA+TGG | 0.604810 | 4.2:+67536626 | MS.gene85053:CDS |
| GCAAAGTGAAAACCTATCCA+TGG | 0.606127 | 4.2:+67536469 | MS.gene85053:CDS |
| ATCATCATCAAAGTGATCGA+TGG | 0.609722 | 4.2:-67537300 | None:intergenic |
| ACCAACATCATGGGCCACAA+TGG | 0.610071 | 4.2:-67535283 | None:intergenic |
| AGGATGTCAGACCCAATGAA+CGG | 0.610737 | 4.2:+67537200 | MS.gene85053:CDS |
| CTATCTGAGTTGCCTATCAG+TGG | 0.611647 | 4.2:+67536894 | MS.gene85053:CDS |
| GTCAATACTGAGGATCAAGC+TGG | 0.613269 | 4.2:+67537092 | MS.gene85053:CDS |
| ACGATCAACAAGGAACAGAA+AGG | 0.624254 | 4.2:+67535760 | MS.gene85053:CDS |
| GCTATCTTCACTTCAGTGTG+TGG | 0.627339 | 4.2:+67537544 | MS.gene85053:CDS |
| GCCCGCTCAGATGCATCCGA+GGG | 0.627415 | 4.2:-67536513 | None:intergenic |
| AGCCAGACTGTAGACAACAC+TGG | 0.630022 | 4.2:+67536777 | MS.gene85053:CDS |
| TGAAGGAACAGAATTGACCT+CGG | 0.630992 | 4.2:-67538018 | None:intergenic |
| ATCCCTCGGATGCATCTGAG+CGG | 0.632878 | 4.2:+67536511 | MS.gene85053:CDS |
| AACAATGAACCAAATTGTCG+AGG | 0.644146 | 4.2:+67535788 | MS.gene85053:CDS |
| AAGAAATAAGCATCACACGT+GGG | 0.646392 | 4.2:+67536808 | MS.gene85053:CDS |
| AGAAATAAGCATCACACGTG+GGG | 0.647299 | 4.2:+67536809 | MS.gene85053:CDS |
| ATTTGAAAAGTGCAATGCAA+AGG | 0.647605 | 4.2:+67535650 | MS.gene85053:CDS |
| TGATTCTGTTAAGGGTGCTG+GGG | 0.649891 | 4.2:+67535365 | MS.gene85053:CDS |
| AGAAAAGTATATTCTCCAAG+GGG | 0.651247 | 4.2:-67537575 | None:intergenic |
| TGCAACTTCAGAAACCATTG+TGG | 0.656050 | 4.2:+67535269 | MS.gene85053:CDS |
| ACTGACCGGGTCATTGACAA+TGG | 0.660231 | 4.2:+67537770 | MS.gene85053:CDS |
| CAAGAAATACAACGTTGTGG+AGG | 0.661040 | 4.2:+67536993 | MS.gene85053:CDS |
| AACAATCTGATATACTTGAG+GGG | 0.662470 | 4.2:+67535721 | MS.gene85053:CDS |
| GCTTGTTATGAACTTTGCCG+AGG | 0.662578 | 4.2:+67538001 | MS.gene85053:CDS |
| ACGTTGTGGAGGCATTGACA+AGG | 0.665635 | 4.2:+67537004 | MS.gene85053:CDS |
| CAAGAAATAAGCATCACACG+TGG | 0.672704 | 4.2:+67536807 | MS.gene85053:CDS |
| AATATCTGTCCAGGCCACCA+TGG | 0.673733 | 4.2:-67536486 | None:intergenic |
| GGGACTCCAGATTCTCGAGA+CGG | 0.673778 | 4.2:+67537221 | MS.gene85053:CDS |
| TCTCCACAATGGAAAAGCAG+AGG | 0.675836 | 4.2:+67536637 | MS.gene85053:CDS |
| GAAGATGAAGAAACTACCCA+TGG | 0.677853 | 4.2:+67537694 | MS.gene85053:CDS |
| GGCCTACGGATAACTTGGGG+TGG | 0.679889 | 4.2:-67537896 | None:intergenic |
| ATGTTGGTGAAACCCTAGAT+GGG | 0.684018 | 4.2:+67535298 | MS.gene85053:CDS |
| TGAAACCCTAGATGGGTCTG+TGG | 0.694469 | 4.2:+67535305 | MS.gene85053:CDS |
| CGATGAACAAGATTTGTGTG+AGG | 0.694960 | 4.2:+67537046 | MS.gene85053:CDS |
| TTCCAAGAAATACAACGTTG+TGG | 0.696088 | 4.2:+67536990 | MS.gene85053:CDS |
| ATAGATGTTGACGATCAACA+AGG | 0.711200 | 4.2:+67535750 | MS.gene85053:CDS |
| TAGGGCCTACGGATAACTTG+GGG | 0.714653 | 4.2:-67537899 | None:intergenic |
| TGACTCGTATTGGACTGACC+GGG | 0.716499 | 4.2:+67537757 | MS.gene85053:CDS |
| ATAGCTGACAACGATGTGAG+TGG | 0.718595 | 4.2:+67535678 | MS.gene85053:CDS |
| AAGTGAAAACCTATCCATGG+TGG | 0.718994 | 4.2:+67536472 | MS.gene85053:CDS |
| AACTCCTGTAGTCAATACTG+AGG | 0.723985 | 4.2:+67537082 | MS.gene85053:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTGATTTTTTAAATTTCT+AGG | - | chr4.2:67537119-67537138 | None:intergenic | 15.0% |
| !!! | AATTTTAAGTGATGAATTTG+GGG | - | chr4.2:67537378-67537397 | None:intergenic | 20.0% |
| !!! | CAATTTTAAGTGATGAATTT+GGG | - | chr4.2:67537379-67537398 | None:intergenic | 20.0% |
| !!! | TGTCATTTTCTCAATTTTAT+CGG | + | chr4.2:67535988-67536007 | MS.gene85053:intron | 20.0% |
| ! | AAAGCGTAAATGTAATTTCA+AGG | + | chr4.2:67537148-67537167 | MS.gene85053:CDS | 25.0% |
| ! | AACAACTTCATCAACAATAT+TGG | - | chr4.2:67535619-67535638 | None:intergenic | 25.0% |
| ! | AAGAAGAATTTAATGAAGCT+GGG | + | chr4.2:67536307-67536326 | MS.gene85053:CDS | 25.0% |
| ! | CCAAATTCATCACTTAAAAT+TGG | + | chr4.2:67537377-67537396 | MS.gene85053:CDS | 25.0% |
| ! | GCTAAAAAGTTCAACATATT+TGG | + | chr4.2:67538173-67538192 | MS.gene85053:CDS | 25.0% |
| ! | TTTCAAGAATTCTGTAATTG+TGG | + | chr4.2:67537625-67537644 | MS.gene85053:CDS | 25.0% |
| !! | AATTACATTTACGCTTTTGA+TGG | - | chr4.2:67537145-67537164 | None:intergenic | 25.0% |
| !! | ATTACATTTACGCTTTTGAT+GGG | - | chr4.2:67537144-67537163 | None:intergenic | 25.0% |
| !! | TGTTTTTCCTGAGAATAAAT+TGG | + | chr4.2:67537457-67537476 | MS.gene85053:CDS | 25.0% |
| !!! | AAGATATCTGCTGATTTTAT+TGG | + | chr4.2:67535819-67535838 | MS.gene85053:intron | 25.0% |
| !!! | CCAATTTTAAGTGATGAATT+TGG | - | chr4.2:67537380-67537399 | None:intergenic | 25.0% |
| AAATTGACAGAGTAAGCAAA+CGG | + | chr4.2:67538099-67538118 | MS.gene85053:CDS | 30.0% | |
| AACAATCTGATATACTTGAG+GGG | + | chr4.2:67535721-67535740 | MS.gene85053:CDS | 30.0% | |
| ACATATTCCATAAGTTTCGT+CGG | - | chr4.2:67536867-67536886 | None:intergenic | 30.0% | |
| ATGATTTCGAAATGCAAACT+AGG | + | chr4.2:67537318-67537337 | MS.gene85053:CDS | 30.0% | |
| ATTCTTGAAATCAGAGAAGA+AGG | - | chr4.2:67537615-67537634 | None:intergenic | 30.0% | |
| ATTGGGAATGATAAAGTTGA+TGG | + | chr4.2:67535588-67535607 | MS.gene85053:CDS | 30.0% | |
| ATTTGTGGTGATTCTGTTAA+GGG | + | chr4.2:67535357-67535376 | MS.gene85053:CDS | 30.0% | |
| CAAACCTTAACCAAATGTTT+AGG | + | chr4.2:67538045-67538064 | MS.gene85053:CDS | 30.0% | |
| CTATTCCTGGGAAAAAAAAT+CGG | + | chr4.2:67537919-67537938 | MS.gene85053:intron | 30.0% | |
| GAAACATCCAATTTATTCTC+AGG | - | chr4.2:67537467-67537486 | None:intergenic | 30.0% | |
| GAACAATCTGATATACTTGA+GGG | + | chr4.2:67535720-67535739 | MS.gene85053:CDS | 30.0% | |
| GAAGAAGAATTTAATGAAGC+TGG | + | chr4.2:67536306-67536325 | MS.gene85053:CDS | 30.0% | |
| TAGTTCAGAAATAGTTCATC+AGG | + | chr4.2:67536383-67536402 | MS.gene85053:CDS | 30.0% | |
| TCAACTTTATCATTCCCAAT+CGG | - | chr4.2:67535588-67535607 | None:intergenic | 30.0% | |
| TCAGCAAATAGTGAAGTAAA+CGG | - | chr4.2:67535408-67535427 | None:intergenic | 30.0% | |
| TGAACAATCTGATATACTTG+AGG | + | chr4.2:67535719-67535738 | MS.gene85053:CDS | 30.0% | |
| TGATTTCGAAATGCAAACTA+GGG | + | chr4.2:67537319-67537338 | MS.gene85053:CDS | 30.0% | |
| TTCTTTCTCTGATATGGTTT+GGG | + | chr4.2:67536446-67536465 | MS.gene85053:CDS | 30.0% | |
| TTTCTTTCTCTGATATGGTT+TGG | + | chr4.2:67536445-67536464 | MS.gene85053:CDS | 30.0% | |
| ! | AGAAAAGTATATTCTCCAAG+GGG | - | chr4.2:67537578-67537597 | None:intergenic | 30.0% |
| ! | ATTGTTGATGAAGTTGTTTG+TGG | + | chr4.2:67535621-67535640 | MS.gene85053:CDS | 30.0% |
| ! | ATTTGAAAAGTGCAATGCAA+AGG | + | chr4.2:67535650-67535669 | MS.gene85053:CDS | 30.0% |
| ! | CAGAAAAGTATATTCTCCAA+GGG | - | chr4.2:67537579-67537598 | None:intergenic | 30.0% |
| ! | GGAGAATATACTTTTCTGAA+TGG | + | chr4.2:67537581-67537600 | MS.gene85053:CDS | 30.0% |
| ! | TCAGAAAAGTATATTCTCCA+AGG | - | chr4.2:67537580-67537599 | None:intergenic | 30.0% |
| ! | TGAGCAAATGTCAAATTTTG+TGG | + | chr4.2:67535494-67535513 | MS.gene85053:CDS | 30.0% |
| ! | TTCACTATTTGCTGAAATGT+TGG | + | chr4.2:67535413-67535432 | MS.gene85053:CDS | 30.0% |
| !! | ATTCTGGAATGATTATGAAC+GGG | - | chr4.2:67536664-67536683 | None:intergenic | 30.0% |
| !! | CATTCTGGAATGATTATGAA+CGG | - | chr4.2:67536665-67536684 | None:intergenic | 30.0% |
| !! | GTATTTGAAACTTTTGCAAC+AGG | - | chr4.2:67537356-67537375 | None:intergenic | 30.0% |
| !!! | CAAGTAGTTTGTCTTTTTTC+TGG | - | chr4.2:67537835-67537854 | None:intergenic | 30.0% |
| !!! | GATTTTTTTTCCCAGGAATA+GGG | - | chr4.2:67537920-67537939 | None:intergenic | 30.0% |
| !!! | TGGTTAAGGTTTGTTTTTGA+AGG | - | chr4.2:67538038-67538057 | None:intergenic | 30.0% |
| !!! | TTTTTCTGGTTTTTCTGCAA+TGG | - | chr4.2:67537821-67537840 | None:intergenic | 30.0% |
| AAAAGCTGTAAAAGATGCAC+TGG | + | chr4.2:67536350-67536369 | MS.gene85053:CDS | 35.0% | |
| AACAATGAACCAAATTGTCG+AGG | + | chr4.2:67535788-67535807 | MS.gene85053:CDS | 35.0% | |
| AACCAAATTGTCGAGGTTAA+AGG | + | chr4.2:67535795-67535814 | MS.gene85053:CDS | 35.0% | |
| AACGCCTAAACATTTGGTTA+AGG | - | chr4.2:67538052-67538071 | None:intergenic | 35.0% | |
| AAGAAATAAGCATCACACGT+GGG | + | chr4.2:67536808-67536827 | MS.gene85053:CDS | 35.0% | |
| AAGATATGAGTGACTCGTAT+TGG | + | chr4.2:67537747-67537766 | MS.gene85053:CDS | 35.0% | |
| AATTGACAGAGTAAGCAAAC+GGG | + | chr4.2:67538100-67538119 | MS.gene85053:CDS | 35.0% | |
| ACACTCAAATTACTGAGCAA+TGG | + | chr4.2:67536163-67536182 | MS.gene85053:CDS | 35.0% | |
| ATAGATGTTGACGATCAACA+AGG | + | chr4.2:67535750-67535769 | MS.gene85053:CDS | 35.0% | |
| ATCATCATCAAAGTGATCGA+TGG | - | chr4.2:67537303-67537322 | None:intergenic | 35.0% | |
| ATCGTGTCATAGATGTCTTT+AGG | - | chr4.2:67536753-67536772 | None:intergenic | 35.0% | |
| ATCTAGAAACCTATGAAGCA+TGG | - | chr4.2:67536055-67536074 | None:intergenic | 35.0% | |
| ATCTGGCAAAGAAGGAAAAA+AGG | + | chr4.2:67537180-67537199 | MS.gene85053:CDS | 35.0% | |
| ATTAGAGCTTGAGATTGCTA+AGG | + | chr4.2:67536926-67536945 | MS.gene85053:CDS | 35.0% | |
| CAGCAAATAGTGAAGTAAAC+GGG | - | chr4.2:67535407-67535426 | None:intergenic | 35.0% | |
| CATTTGTGGTGATTCTGTTA+AGG | + | chr4.2:67535356-67535375 | MS.gene85053:CDS | 35.0% | |
| GACTGATATTGTTGATATCG+TGG | + | chr4.2:67535536-67535555 | MS.gene85053:CDS | 35.0% | |
| GCATTCTCATCTATATAACC+AGG | - | chr4.2:67537972-67537991 | None:intergenic | 35.0% | |
| GGGAAGAGAAAACTAACATA+TGG | + | chr4.2:67536327-67536346 | MS.gene85053:CDS | 35.0% | |
| GTTCATGATGAAGTCATTTG+TGG | + | chr4.2:67535342-67535361 | MS.gene85053:CDS | 35.0% | |
| GTTTCAAACACTAGTTAAGC+AGG | - | chr4.2:67535855-67535874 | None:intergenic | 35.0% | |
| TACCTTTAACCTCGACAATT+TGG | - | chr4.2:67535800-67535819 | None:intergenic | 35.0% | |
| TCAAATATGAGGCAAAAGGT+TGG | + | chr4.2:67536231-67536250 | MS.gene85053:CDS | 35.0% | |
| TCAATATTGTACATGCCGAT+TGG | + | chr4.2:67535447-67535466 | MS.gene85053:CDS | 35.0% | |
| TCTTTCTCTGATATGGTTTG+GGG | + | chr4.2:67536447-67536466 | MS.gene85053:CDS | 35.0% | |
| TGGAGAGAAAGAATGTGTTT+CGG | + | chr4.2:67536251-67536270 | MS.gene85053:CDS | 35.0% | |
| TTCAATGTAAGCACAAGTGT+CGG | - | chr4.2:67535965-67535984 | None:intergenic | 35.0% | |
| TTCCAAGAAATACAACGTTG+TGG | + | chr4.2:67536990-67537009 | MS.gene85053:CDS | 35.0% | |
| TTCTCATCTATATAACCAGG+AGG | - | chr4.2:67537969-67537988 | None:intergenic | 35.0% | |
| TTGATATTGAACATGCCGAT+TGG | + | chr4.2:67535570-67535589 | MS.gene85053:CDS | 35.0% | |
| TTGGAAAGAGATTTCATGCA+CGG | + | chr4.2:67537655-67537674 | MS.gene85053:CDS | 35.0% | |
| ! | AACCAAATGTTTAGGCGTTT+TGG | + | chr4.2:67538053-67538072 | MS.gene85053:CDS | 35.0% |
| ! | AATTGGTGACTGTATTCGTA+AGG | + | chr4.2:67537394-67537413 | MS.gene85053:CDS | 35.0% |
| ! | ACCAAATGTTTAGGCGTTTT+GGG | + | chr4.2:67538054-67538073 | MS.gene85053:CDS | 35.0% |
| ! | AGTGATACTTGTAGTTCTGT+TGG | + | chr4.2:67536075-67536094 | MS.gene85053:intron | 35.0% |
| ! | ATCTCAGCTGAAGGATTTTA+GGG | + | chr4.2:67536608-67536627 | MS.gene85053:CDS | 35.0% |
| ! | ATTTTCACCGACGAAACTTA+TGG | + | chr4.2:67536857-67536876 | MS.gene85053:CDS | 35.0% |
| ! | CAATATTGTACATGCCGATT+GGG | + | chr4.2:67535448-67535467 | MS.gene85053:CDS | 35.0% |
| ! | CATGATGGAATGGAAAAACT+CGG | + | chr4.2:67536201-67536220 | MS.gene85053:CDS | 35.0% |
| ! | CGAGTTTTCTTTCTCTGATA+TGG | + | chr4.2:67536440-67536459 | MS.gene85053:CDS | 35.0% |
| ! | TGATATTGAACATGCCGATT+GGG | + | chr4.2:67535571-67535590 | MS.gene85053:CDS | 35.0% |
| ! | TTTTCCATTCCATCATGCAA+CGG | - | chr4.2:67536198-67536217 | None:intergenic | 35.0% |
| !! | GTTTTCCGATTTTTTTTCCC+AGG | - | chr4.2:67537927-67537946 | None:intergenic | 35.0% |
| !! | TGAACTATTTCTGAACTACC+AGG | - | chr4.2:67536381-67536400 | None:intergenic | 35.0% |
| !!! | CGATTTTTTTTCCCAGGAAT+AGG | - | chr4.2:67537921-67537940 | None:intergenic | 35.0% |
| !!! | TGCTATTTCGTTGCGTATTT+TGG | + | chr4.2:67536558-67536577 | MS.gene85053:CDS | 35.0% |
| AAACCTATGAAGCATGGACA+CGG | - | chr4.2:67536049-67536068 | None:intergenic | 40.0% | |
| AACTCCTGTAGTCAATACTG+AGG | + | chr4.2:67537082-67537101 | MS.gene85053:CDS | 40.0% | |
| AAGCACAGTCTATAGCATTC+TGG | - | chr4.2:67536680-67536699 | None:intergenic | 40.0% | |
| AAGTGAAAACCTATCCATGG+TGG | + | chr4.2:67536472-67536491 | MS.gene85053:CDS | 40.0% | |
| AAGTTCATAACAAGCTCAGC+AGG | - | chr4.2:67537996-67538015 | None:intergenic | 40.0% | |
| ACGATCAACAAGGAACAGAA+AGG | + | chr4.2:67535760-67535779 | MS.gene85053:CDS | 40.0% | |
| AGAAATAAGCATCACACGTG+GGG | + | chr4.2:67536809-67536828 | MS.gene85053:CDS | 40.0% | |
| ATGTTATCATTCCGCCCAAT+CGG | - | chr4.2:67535465-67535484 | None:intergenic | 40.0% | |
| ATTTCATGCACGGATGAAGT+TGG | + | chr4.2:67537665-67537684 | MS.gene85053:CDS | 40.0% | |
| CAACTCATTCCGAAGAAAGA+TGG | + | chr4.2:67537425-67537444 | MS.gene85053:CDS | 40.0% | |
| CAAGAAATAAGCATCACACG+TGG | + | chr4.2:67536807-67536826 | MS.gene85053:CDS | 40.0% | |
| CAAGAAATACAACGTTGTGG+AGG | + | chr4.2:67536993-67537012 | MS.gene85053:CDS | 40.0% | |
| CACTTGGAGTGTAATTAAGC+TGG | - | chr4.2:67538217-67538236 | None:intergenic | 40.0% | |
| CAGAAATAGTTCATCAGGCA+CGG | + | chr4.2:67536388-67536407 | MS.gene85053:CDS | 40.0% | |
| CGATGAACAAGATTTGTGTG+AGG | + | chr4.2:67537046-67537065 | MS.gene85053:CDS | 40.0% | |
| CTCAGCTGCTTGCATTTAAT+CGG | + | chr4.2:67536949-67536968 | MS.gene85053:CDS | 40.0% | |
| CTCCACAACGTTGTATTTCT+TGG | - | chr4.2:67536995-67537014 | None:intergenic | 40.0% | |
| CTGCCAGCAGTAAAAAAAGA+AGG | + | chr4.2:67536417-67536436 | MS.gene85053:CDS | 40.0% | |
| GAAAGAATGTGTTTCGGAAC+AGG | + | chr4.2:67536257-67536276 | MS.gene85053:CDS | 40.0% | |
| GAAGATGAAGAAACTACCCA+TGG | + | chr4.2:67537694-67537713 | MS.gene85053:CDS | 40.0% | |
| GAATGCTATAGACTGTGCTT+TGG | + | chr4.2:67536680-67536699 | MS.gene85053:intron | 40.0% | |
| GCAAAGTGAAAACCTATCCA+TGG | + | chr4.2:67536469-67536488 | MS.gene85053:CDS | 40.0% | |
| GGAGTCAAATATGAGGCAAA+AGG | + | chr4.2:67536227-67536246 | MS.gene85053:CDS | 40.0% | |
| GGGTAGTTTCTTCATCTTCT+TGG | - | chr4.2:67537693-67537712 | None:intergenic | 40.0% | |
| TAGGGTTTCACCAACATCAT+GGG | - | chr4.2:67535295-67535314 | None:intergenic | 40.0% | |
| TCGTCATACTCAACAGTTGT+AGG | - | chr4.2:67537491-67537510 | None:intergenic | 40.0% | |
| TCTCAAGACGAGTCGAATAT+GGG | + | chr4.2:67536709-67536728 | MS.gene85053:intron | 40.0% | |
| TGAAGGAACAGAATTGACCT+CGG | - | chr4.2:67538021-67538040 | None:intergenic | 40.0% | |
| TGCAACTTCAGAAACCATTG+TGG | + | chr4.2:67535269-67535288 | MS.gene85053:CDS | 40.0% | |
| TGGACAGATATTTGATCCCT+CGG | + | chr4.2:67536497-67536516 | MS.gene85053:CDS | 40.0% | |
| TTTCAAGGATGCTATGCATC+TGG | + | chr4.2:67537163-67537182 | MS.gene85053:CDS | 40.0% | |
| ! | ATGTTGGTGAAACCCTAGAT+GGG | + | chr4.2:67535298-67535317 | MS.gene85053:CDS | 40.0% |
| ! | CATCTCAGCTGAAGGATTTT+AGG | + | chr4.2:67536607-67536626 | MS.gene85053:CDS | 40.0% |
| ! | GGTTTTTCTGCAATGGATGT+TGG | - | chr4.2:67537814-67537833 | None:intergenic | 40.0% |
| ! | TCTCAAGCTCTAATCGATCA+AGG | - | chr4.2:67536920-67536939 | None:intergenic | 40.0% |
| ! | TTGGTGACAGATCATTTGCA+TGG | + | chr4.2:67536577-67536596 | MS.gene85053:CDS | 40.0% |
| !! | AAAGCTTTGAACACTGCACT+TGG | - | chr4.2:67538233-67538252 | None:intergenic | 40.0% |
| !! | TGATCCTCAGTATTGACTAC+AGG | - | chr4.2:67537089-67537108 | None:intergenic | 40.0% |
| !!! | TCGCCTTCTTTTTTTACTGC+TGG | - | chr4.2:67536423-67536442 | None:intergenic | 40.0% |
| !!! | TTTTATCGGCGTTGACATGT+CGG | + | chr4.2:67536002-67536021 | MS.gene85053:intron | 40.0% |
| AATAGGGCCTACGGATAACT+TGG | - | chr4.2:67537904-67537923 | None:intergenic | 45.0% | |
| AATCGATCAAGGCCACTGAT+AGG | - | chr4.2:67536909-67536928 | None:intergenic | 45.0% | |
| ACATTCCACAGACCCATCTA+GGG | - | chr4.2:67535313-67535332 | None:intergenic | 45.0% | |
| AGGATGTCAGACCCAATGAA+CGG | + | chr4.2:67537200-67537219 | MS.gene85053:CDS | 45.0% | |
| ATAGCTGACAACGATGTGAG+TGG | + | chr4.2:67535678-67535697 | MS.gene85053:CDS | 45.0% | |
| ATAGGGCCTACGGATAACTT+GGG | - | chr4.2:67537903-67537922 | None:intergenic | 45.0% | |
| ATGAAGAAACTACCCATGGC+TGG | + | chr4.2:67537698-67537717 | MS.gene85053:CDS | 45.0% | |
| ATGCTGAAGCTAAAACCTCC+TGG | + | chr4.2:67537951-67537970 | MS.gene85053:intron | 45.0% | |
| ATTCTCGAGACGGTGATTGT+TGG | + | chr4.2:67537231-67537250 | MS.gene85053:CDS | 45.0% | |
| CACCTGAACATTCCAAGAGA+AGG | + | chr4.2:67537273-67537292 | MS.gene85053:CDS | 45.0% | |
| CATTGCCATTGTCAATGACC+CGG | - | chr4.2:67537778-67537797 | None:intergenic | 45.0% | |
| CTAGGGTTTCACCAACATCA+TGG | - | chr4.2:67535296-67535315 | None:intergenic | 45.0% | |
| CTATCTGAGTTGCCTATCAG+TGG | + | chr4.2:67536894-67536913 | MS.gene85053:CDS | 45.0% | |
| CTCCTTCTCTTGGAATGTTC+AGG | - | chr4.2:67537278-67537297 | None:intergenic | 45.0% | |
| CTGTAATTGTGGCTGCTGAT+TGG | + | chr4.2:67537636-67537655 | MS.gene85053:CDS | 45.0% | |
| GAATGTGTTTCGGAACAGGT+TGG | + | chr4.2:67536261-67536280 | MS.gene85053:CDS | 45.0% | |
| GAGGGATCAAATATCTGTCC+AGG | - | chr4.2:67536498-67536517 | None:intergenic | 45.0% | |
| GCCCAAAACGCCTAAACATT+TGG | - | chr4.2:67538058-67538077 | None:intergenic | 45.0% | |
| GCTATCTTCACTTCAGTGTG+TGG | + | chr4.2:67537544-67537563 | MS.gene85053:CDS | 45.0% | |
| GTCAATACTGAGGATCAAGC+TGG | + | chr4.2:67537092-67537111 | MS.gene85053:CDS | 45.0% | |
| GTCTCAAGACGAGTCGAATA+TGG | + | chr4.2:67536708-67536727 | MS.gene85053:intron | 45.0% | |
| TAGATGGGTCTGTGGAATGT+GGG | + | chr4.2:67535313-67535332 | MS.gene85053:CDS | 45.0% | |
| TAGGGCACATTTCTCCACAA+TGG | + | chr4.2:67536626-67536645 | MS.gene85053:CDS | 45.0% | |
| TCAACGACGCCATCTTTCTT+CGG | - | chr4.2:67537437-67537456 | None:intergenic | 45.0% | |
| TCTCCACAATGGAAAAGCAG+AGG | + | chr4.2:67536637-67536656 | MS.gene85053:CDS | 45.0% | |
| TGCTATGCATCTGGCAAAGA+AGG | + | chr4.2:67537172-67537191 | MS.gene85053:CDS | 45.0% | |
| TGGAATGTTCAGGTGAAACC+AGG | - | chr4.2:67537268-67537287 | None:intergenic | 45.0% | |
| TTCTGTTGGTGCAGGTTTGT+CGG | + | chr4.2:67536089-67536108 | MS.gene85053:intron | 45.0% | |
| ! | AATCTGGAGTCCCGTTCATT+GGG | - | chr4.2:67537214-67537233 | None:intergenic | 45.0% |
| ! | ACTTGTAGTTCTGTTGGTGC+AGG | + | chr4.2:67536081-67536100 | MS.gene85053:intron | 45.0% |
| ! | GAATGAAGCATCTCAGCTGA+AGG | + | chr4.2:67536599-67536618 | MS.gene85053:CDS | 45.0% |
| ! | GATGTTGGTGAAACCCTAGA+TGG | + | chr4.2:67535297-67535316 | MS.gene85053:CDS | 45.0% |
| ! | TATTGTACATGCCGATTGGG+CGG | + | chr4.2:67535451-67535470 | MS.gene85053:CDS | 45.0% |
| !! | GCTTGTTATGAACTTTGCCG+AGG | + | chr4.2:67538001-67538020 | MS.gene85053:CDS | 45.0% |
| !! | GTGATTCTGTTAAGGGTGCT+GGG | + | chr4.2:67535364-67535383 | MS.gene85053:CDS | 45.0% |
| !! | TGATTCTGTTAAGGGTGCTG+GGG | + | chr4.2:67535365-67535384 | MS.gene85053:CDS | 45.0% |
| AAAACCTATCCATGGTGGCC+TGG | + | chr4.2:67536477-67536496 | MS.gene85053:CDS | 50.0% | |
| AAACTACCCATGGCTGGAAC+TGG | + | chr4.2:67537704-67537723 | MS.gene85053:CDS | 50.0% | |
| AATAAGCATCACACGTGGGG+TGG | + | chr4.2:67536812-67536831 | MS.gene85053:CDS | 50.0% | |
| AATATCTGTCCAGGCCACCA+TGG | - | chr4.2:67536489-67536508 | None:intergenic | 50.0% | |
| ACCAACATCATGGGCCACAA+TGG | - | chr4.2:67535286-67535305 | None:intergenic | 50.0% | |
| ACCATTGTGGCCCATGATGT+TGG | + | chr4.2:67535282-67535301 | MS.gene85053:CDS | 50.0% | |
| ACTGACCGGGTCATTGACAA+TGG | + | chr4.2:67537770-67537789 | MS.gene85053:CDS | 50.0% | |
| AGATGGGTCTGTGGAATGTG+GGG | + | chr4.2:67535314-67535333 | MS.gene85053:CDS | 50.0% | |
| AGCACTACTGAGAGCTACCT+TGG | - | chr4.2:67538156-67538175 | None:intergenic | 50.0% | |
| AGCCAGACTGTAGACAACAC+TGG | + | chr4.2:67536777-67536796 | MS.gene85053:CDS | 50.0% | |
| AGTAAGCAAACGGGCAAGAG+TGG | + | chr4.2:67538109-67538128 | MS.gene85053:CDS | 50.0% | |
| ATCAGATCCAGTTCCAGCCA+TGG | - | chr4.2:67537714-67537733 | None:intergenic | 50.0% | |
| CAATCACCGTCTCGAGAATC+TGG | - | chr4.2:67537230-67537249 | None:intergenic | 50.0% | |
| CACATTCCACAGACCCATCT+AGG | - | chr4.2:67535314-67535333 | None:intergenic | 50.0% | |
| CTAGATGGGTCTGTGGAATG+TGG | + | chr4.2:67535312-67535331 | MS.gene85053:CDS | 50.0% | |
| GCCAGACTGTAGACAACACT+GGG | + | chr4.2:67536778-67536797 | MS.gene85053:CDS | 50.0% | |
| GGATGTCAGACCCAATGAAC+GGG | + | chr4.2:67537201-67537220 | MS.gene85053:CDS | 50.0% | |
| GTGACTCGTATTGGACTGAC+CGG | + | chr4.2:67537756-67537775 | MS.gene85053:CDS | 50.0% | |
| TAGGGCCTACGGATAACTTG+GGG | - | chr4.2:67537902-67537921 | None:intergenic | 50.0% | |
| TATCCGTAGGCCCTATTCCT+GGG | + | chr4.2:67537907-67537926 | MS.gene85053:intron | 50.0% | |
| TCAGATCCAGTTCCAGCCAT+GGG | - | chr4.2:67537713-67537732 | None:intergenic | 50.0% | |
| TCAGGTGAAACCAGGTGATC+TGG | - | chr4.2:67537260-67537279 | None:intergenic | 50.0% | |
| TCCCAGTGTTGTCTACAGTC+TGG | - | chr4.2:67536782-67536801 | None:intergenic | 50.0% | |
| TCGGCGAGGAGTCAAATATG+AGG | + | chr4.2:67536220-67536239 | MS.gene85053:CDS | 50.0% | |
| TGAAACCCTAGATGGGTCTG+TGG | + | chr4.2:67535305-67535324 | MS.gene85053:CDS | 50.0% | |
| TGACTCGTATTGGACTGACC+GGG | + | chr4.2:67537757-67537776 | MS.gene85053:CDS | 50.0% | |
| TGGAATGGAAAAACTCGGCG+AGG | + | chr4.2:67536206-67536225 | MS.gene85053:CDS | 50.0% | |
| TGTCCGTGTCCATGCTTCAT+AGG | + | chr4.2:67536043-67536062 | MS.gene85053:intron | 50.0% | |
| TGTGTGGCACATAAACCCCT+TGG | + | chr4.2:67537560-67537579 | MS.gene85053:CDS | 50.0% | |
| TTATCCGTAGGCCCTATTCC+TGG | + | chr4.2:67537906-67537925 | MS.gene85053:intron | 50.0% | |
| TTCCATCATGCAACGGCACA+TGG | - | chr4.2:67536191-67536210 | None:intergenic | 50.0% | |
| TTGTTGGACTCCAGATCACC+TGG | + | chr4.2:67537247-67537266 | MS.gene85053:CDS | 50.0% | |
| TTTCCCAGGAATAGGGCCTA+CGG | - | chr4.2:67537913-67537932 | None:intergenic | 50.0% | |
| ! | AAAGATGCACTGGTGAAGCC+TGG | + | chr4.2:67536360-67536379 | MS.gene85053:CDS | 50.0% |
| ! | CAAGAAGTGCGTAGATGCCA+AGG | + | chr4.2:67538136-67538155 | MS.gene85053:CDS | 50.0% |
| ! | GAATCTGGAGTCCCGTTCAT+TGG | - | chr4.2:67537215-67537234 | None:intergenic | 50.0% |
| ! | GGTGACTTAACAGCTGGCTT+TGG | - | chr4.2:67537872-67537891 | None:intergenic | 50.0% |
| ! | GGTGATTCTGTTAAGGGTGC+TGG | + | chr4.2:67535363-67535382 | MS.gene85053:CDS | 50.0% |
| ! | TGTGCCGTTGCATGATGGAA+TGG | + | chr4.2:67536191-67536210 | MS.gene85053:CDS | 50.0% |
| !! | ACGTTGTGGAGGCATTGACA+AGG | + | chr4.2:67537004-67537023 | MS.gene85053:CDS | 50.0% |
| !! | GAACAGGTTGGTTCAGATGG+TGG | + | chr4.2:67536273-67536292 | MS.gene85053:CDS | 50.0% |
| !! | GGTCCTCTGCTTTTCCATTG+TGG | - | chr4.2:67536643-67536662 | None:intergenic | 50.0% |
| !! | GTAAGCACAAGTGTCGGTGT+CGG | - | chr4.2:67535959-67535978 | None:intergenic | 50.0% |
| !! | TAGGCGTTTTGGGCGACTAA+AGG | + | chr4.2:67538064-67538083 | MS.gene85053:CDS | 50.0% |
| !! | TCGGAACAGGTTGGTTCAGA+TGG | + | chr4.2:67536270-67536289 | MS.gene85053:CDS | 50.0% |
| AGCCACCCCAAGTTATCCGT+AGG | + | chr4.2:67537894-67537913 | MS.gene85053:intron | 55.0% | |
| ATCCCTCGGATGCATCTGAG+CGG | + | chr4.2:67536511-67536530 | MS.gene85053:CDS | 55.0% | |
| ATCGATGGCGCTCCTTCTCT+TGG | - | chr4.2:67537288-67537307 | None:intergenic | 55.0% | |
| GATGGGTCTGTGGAATGTGG+GGG | + | chr4.2:67535315-67535334 | MS.gene85053:CDS | 55.0% | |
| GCAGGTTTGTCGGCAGCTAT+TGG | + | chr4.2:67536099-67536118 | MS.gene85053:intron | 55.0% | |
| GGGACTCCAGATTCTCGAGA+CGG | + | chr4.2:67537221-67537240 | MS.gene85053:CDS | 55.0% | |
| TGAAGTAAACGGGCGCGCTA+TGG | - | chr4.2:67535397-67535416 | None:intergenic | 55.0% | |
| ! | AGCCATGTGCCGTTGCATGA+TGG | + | chr4.2:67536186-67536205 | MS.gene85053:CDS | 55.0% |
| ! | GGCTCTGGTGACTTAACAGC+TGG | - | chr4.2:67537878-67537897 | None:intergenic | 55.0% |
| ! | GGTTGGTTCAGATGGTGGTC+AGG | + | chr4.2:67536278-67536297 | MS.gene85053:CDS | 55.0% |
| !! | AAGTGTCGGTGTCGGACACT+AGG | - | chr4.2:67535951-67535970 | None:intergenic | 55.0% |
| !! | GTCGGCAGCTATTGGTAGTG+AGG | + | chr4.2:67536107-67536126 | MS.gene85053:CDS | 55.0% |
| !! | TGACATGTCGGTGTCGTGTC+AGG | + | chr4.2:67536014-67536033 | MS.gene85053:intron | 55.0% |
| CGGATAACTTGGGGTGGCTC+TGG | - | chr4.2:67537893-67537912 | None:intergenic | 60.0% | |
| CTGTCCAGGCCACCATGGAT+AGG | - | chr4.2:67536484-67536503 | None:intergenic | 60.0% | |
| GGCCTACGGATAACTTGGGG+TGG | - | chr4.2:67537899-67537918 | None:intergenic | 60.0% | |
| GTCTGTGGAATGTGGGGGTC+AGG | + | chr4.2:67535320-67535339 | MS.gene85053:CDS | 60.0% | |
| TCCCTCGGATGCATCTGAGC+GGG | + | chr4.2:67536512-67536531 | MS.gene85053:CDS | 60.0% | |
| AAACGGGCGCGCTATGGCCA+CGG | - | chr4.2:67535391-67535410 | None:intergenic | 65.0% | |
| GCCCGCTCAGATGCATCCGA+GGG | - | chr4.2:67536516-67536535 | None:intergenic | 65.0% | |
| TGCCCGCTCAGATGCATCCG+AGG | - | chr4.2:67536517-67536536 | None:intergenic | 65.0% | |
| !! | TGTTAAGGGTGCTGGGGCCG+TGG | + | chr4.2:67535371-67535390 | MS.gene85053:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 67535234 | 67538271 | 67535234 | ID=MS.gene85053 |
| chr4.2 | mRNA | 67535234 | 67538271 | 67535234 | ID=MS.gene85053.t1;Parent=MS.gene85053 |
| chr4.2 | exon | 67535234 | 67535816 | 67535234 | ID=MS.gene85053.t1.exon1;Parent=MS.gene85053.t1 |
| chr4.2 | CDS | 67535234 | 67535816 | 67535234 | ID=cds.MS.gene85053.t1;Parent=MS.gene85053.t1 |
| chr4.2 | exon | 67536103 | 67536663 | 67536103 | ID=MS.gene85053.t1.exon2;Parent=MS.gene85053.t1 |
| chr4.2 | CDS | 67536103 | 67536663 | 67536103 | ID=cds.MS.gene85053.t1;Parent=MS.gene85053.t1 |
| chr4.2 | exon | 67536757 | 67537911 | 67536757 | ID=MS.gene85053.t1.exon3;Parent=MS.gene85053.t1 |
| chr4.2 | CDS | 67536757 | 67537911 | 67536757 | ID=cds.MS.gene85053.t1;Parent=MS.gene85053.t1 |
| chr4.2 | exon | 67537982 | 67538271 | 67537982 | ID=MS.gene85053.t1.exon4;Parent=MS.gene85053.t1 |
| chr4.2 | CDS | 67537982 | 67538271 | 67537982 | ID=cds.MS.gene85053.t1;Parent=MS.gene85053.t1 |
| Gene Sequence |
| Protein sequence |
