AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85356

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85356.t1 MTR_7g115250 96.917 519 16 0 1 519 1 519 0.0 1050
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85356.t1 AT2G32320 57.634 524 205 5 1 509 1 522 0.0 639
MS.gene85356.t1 AT2G32320 46.617 266 135 3 258 517 1 265 1.10e-78 256
MS.gene85356.t1 AT2G32320 56.874 531 205 6 1 509 1 529 0.0 634
MS.gene85356.t1 AT2G32320 45.421 273 135 4 258 517 1 272 5.43e-76 249
MS.gene85356.t1 AT2G31580 57.935 523 200 6 1 509 48 564 0.0 634
MS.gene85356.t1 AT2G31580 50.562 267 125 3 257 517 47 312 3.63e-84 271
MS.gene85356.t1 AT2G31580 57.935 523 200 6 1 509 1 517 0.0 633
MS.gene85356.t1 AT2G31580 50.752 266 124 3 258 517 1 265 2.16e-84 271
MS.gene85356.t1 AT2G31580 57.935 523 200 6 1 509 1 517 0.0 633
MS.gene85356.t1 AT2G31580 50.752 266 124 3 258 517 1 265 2.16e-84 271
MS.gene85356.t1 AT2G32320 56.343 536 205 6 1 509 1 534 0.0 632
MS.gene85356.t1 AT2G32320 44.245 278 136 4 258 517 1 277 2.22e-75 248
MS.gene85356.t1 AT2G31580 60.287 418 156 3 1 409 48 464 0.0 543
MS.gene85356.t1 AT2G31580 50.562 267 125 3 257 517 47 312 2.18e-85 271
MS.gene85356.t1 AT2G31580 60.287 418 156 3 1 409 1 417 0.0 542
MS.gene85356.t1 AT2G31580 50.752 266 124 3 258 517 1 265 1.34e-85 271

Find 82 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATAGCAAGCACGAGATTT+TGG 0.193208 2.1:+47039838 MS.gene85356:CDS
ATCAATATAACACTTGTTTC+TGG 0.196106 2.1:+47040375 MS.gene85356:CDS
CATCTGTCTTTGTTAGAAAA+TGG 0.204561 2.1:+47039424 MS.gene85356:CDS
GTAGCACATATTGACATAAT+TGG 0.217082 2.1:+47040608 MS.gene85356:CDS
GGAAGCTCAACGTAGTTTAA+AGG 0.298288 2.1:+47040427 MS.gene85356:CDS
GATGGAAACAAGGATGATAT+TGG 0.312568 2.1:-47039199 None:intergenic
ATCAATATGATCAATGCTTT+TGG 0.315113 2.1:+47039574 MS.gene85356:CDS
TTCTGGAAGCTTGTTGCATC+TGG 0.315797 2.1:+47040392 MS.gene85356:CDS
ACATAATTGGATCAGCCTTT+TGG 0.332320 2.1:+47040621 MS.gene85356:CDS
GACAAGGATCCTCAGTATAT+CGG 0.355766 2.1:+47040516 MS.gene85356:CDS
GTGCTCCGGTTGAAAGAAAA+AGG 0.368156 2.1:+47039787 MS.gene85356:CDS
TTCAGAGCTCTGTCATCGTT+TGG 0.371948 2.1:-47040041 None:intergenic
TGGCTGTCTTAGAAGAATTT+AGG 0.384849 2.1:+47040084 MS.gene85356:CDS
TGGGTTGTCGTTCGGATAGA+TGG 0.400901 2.1:+47039975 MS.gene85356:CDS
CATGTATCTCAGAAAATCTA+TGG 0.415936 2.1:-47040007 None:intergenic
CGTCTACATGGGTTGTCGTT+CGG 0.419353 2.1:+47039967 MS.gene85356:CDS
CAGGATATAGTATTTGCTTA+CGG 0.421233 2.1:+47040107 MS.gene85356:CDS
AGGATATAGTATTTGCTTAC+GGG 0.422090 2.1:+47040108 MS.gene85356:CDS
ATGGAAACAAGGATGATATT+GGG 0.437104 2.1:-47039198 None:intergenic
CCCTTCAAGCATATCTTTCG+TGG 0.441511 2.1:+47039526 MS.gene85356:CDS
TGTTATATTGATTGTTTATG+TGG 0.458697 2.1:-47040364 None:intergenic
AGAGAGTCTTCTGAAAGTTA+TGG 0.460466 2.1:+47040575 MS.gene85356:CDS
GAATAATTTAACTCAGTTTG+AGG 0.467561 2.1:-47040260 None:intergenic
GCAAGTTGATGCCGTCTACA+TGG 0.480368 2.1:+47039955 MS.gene85356:CDS
AGACAATGTTCTCATCCATC+AGG 0.486541 2.1:+47040547 MS.gene85356:CDS
GAAGCTCAACGTAGTTTAAA+GGG 0.486895 2.1:+47040428 MS.gene85356:CDS
AGCACGTCTTTCATAGAACT+TGG 0.487037 2.1:-47039367 None:intergenic
TCCACGAAAGATATGCTTGA+AGG 0.490776 2.1:-47039527 None:intergenic
TAATGTTAATTACAATACAT+TGG 0.491350 2.1:+47039692 MS.gene85356:CDS
ACAAGGATCCTCAGTATATC+GGG 0.501667 2.1:+47040517 MS.gene85356:CDS
GCTGATATAGTTCTCGCATA+CGG 0.505255 2.1:+47039306 MS.gene85356:CDS
GCCCGGGTGTTCCAACCAAA+AGG 0.507374 2.1:-47040636 None:intergenic
GCATCAATTCTTCCCGCAGA+TGG 0.511538 2.1:+47039446 MS.gene85356:CDS
CTGATATAGTTCTCGCATAC+GGG 0.515984 2.1:+47039307 MS.gene85356:CDS
CTTCAACTTACGTGATGAGA+TGG 0.518619 2.1:+47040225 MS.gene85356:CDS
TTCAAAGTAGTTACATGGTG+AGG 0.523621 2.1:-47039243 None:intergenic
GATATACTGAGGATCCTTGT+CGG 0.525089 2.1:-47040514 None:intergenic
ATGACTTTCCCATGGAAAGA+AGG 0.531897 2.1:-47039483 None:intergenic
TTGTACGAGACTATCTTTCG+TGG 0.535629 2.1:+47040327 MS.gene85356:CDS
CACGTAAGTTGAAGTGAAGA+AGG 0.536964 2.1:-47040216 None:intergenic
TCTCAGAAAATCTATGGAAG+TGG 0.540427 2.1:-47040001 None:intergenic
GAAGACAATGGTAGAGGATG+TGG 0.541479 2.1:+47039746 MS.gene85356:CDS
AAGACTCTCTATTCTCCTGA+TGG 0.545478 2.1:-47040562 None:intergenic
CATGATCCTTGTCGTAACAT+TGG 0.547787 2.1:-47039717 None:intergenic
TCAAATTCAAAGTAGTTACA+TGG 0.550159 2.1:-47039248 None:intergenic
GATCCTTGTCGGAACATCAC+AGG 0.557479 2.1:-47040503 None:intergenic
GGAGATTAACAATGTGAAGC+CGG 0.561526 2.1:+47039905 MS.gene85356:CDS
TGTCTTAGAAGAATTTAGGC+AGG 0.561582 2.1:+47040088 MS.gene85356:CDS
CAACTTGCTATCAAAATCAA+AGG 0.562419 2.1:-47039940 None:intergenic
ACGTCTTTCATAGAACTTGG+TGG 0.569950 2.1:-47039364 None:intergenic
TCTCGTACAATCTCAGCAGA+TGG 0.571700 2.1:-47040314 None:intergenic
CAAGTTGATGCCGTCTACAT+GGG 0.573568 2.1:+47039956 MS.gene85356:CDS
TCAAAGGACCTCACATACTC+CGG 0.578559 2.1:-47039924 None:intergenic
GAAAATGCAGTTCCATCTGC+GGG 0.581278 2.1:-47039458 None:intergenic
GTGAAGTTTCGAAGCAGTGA+TGG 0.581578 2.1:-47039217 None:intergenic
TCAACTGCAAAAGAAAATTG+AGG 0.584666 2.1:+47040454 MS.gene85356:CDS
CCACGAAAGATATGCTTGAA+GGG 0.586300 2.1:-47039526 None:intergenic
AATCCACTGATCTTTATCAA+AGG 0.587140 2.1:+47040162 MS.gene85356:CDS
ACTGCTCGTGCATCAAAAGA+AGG 0.597656 2.1:-47040284 None:intergenic
GTACACTGAAGATGGTGCTC+CGG 0.605681 2.1:+47039773 MS.gene85356:CDS
GGAAAATGCAGTTCCATCTG+CGG 0.614558 2.1:-47039459 None:intergenic
GGTGGTCTTCTTGAAAACAA+AGG 0.616388 2.1:-47039346 None:intergenic
TCGAAGCAGTGATGGAAACA+AGG 0.616905 2.1:-47039209 None:intergenic
GATGAATTCTTGCGCCGTTG+CGG 0.621880 2.1:+47039269 MS.gene85356:CDS
CACAAGGTATGACTTTCCCA+TGG 0.623313 2.1:-47039491 None:intergenic
ATATTCTTCAAGCACCGCAA+CGG 0.624708 2.1:-47039283 None:intergenic
GGATATAGTATTTGCTTACG+GGG 0.628115 2.1:+47040109 MS.gene85356:CDS
ATGTGAAGCCGGAGTATGTG+AGG 0.637922 2.1:+47039916 MS.gene85356:CDS
AATGAATGAGAAGGAAGCAA+AGG 0.639879 2.1:+47039614 MS.gene85356:CDS
CGAACGACAACCCATGTAGA+CGG 0.642243 2.1:-47039966 None:intergenic
GTGGTGAAGTACACTGAAGA+TGG 0.648204 2.1:+47039765 MS.gene85356:CDS
TTCAAGCATATCTTTCGTGG+AGG 0.651523 2.1:+47039529 MS.gene85356:CDS
TACGAGACTATCTTTCGTGG+AGG 0.660506 2.1:+47040330 MS.gene85356:CDS
ACTTTCCCATGGAAAGAAGG+AGG 0.661610 2.1:-47039480 None:intergenic
CTTGATGAATTCATGTGCGG+TGG 0.664255 2.1:+47040064 MS.gene85356:CDS
TGAACGCGGAATGAATGAGA+AGG 0.664793 2.1:+47039605 MS.gene85356:CDS
TCTCCTTTGATAAAGATCAG+TGG 0.665765 2.1:-47040165 None:intergenic
GAACTTGATGAATTCATGTG+CGG 0.679141 2.1:+47040061 MS.gene85356:CDS
TATTCTATCCCGATATACTG+AGG 0.682722 2.1:-47040525 None:intergenic
TTGCCTGTGATGTTCCGACA+AGG 0.690100 2.1:+47040500 MS.gene85356:CDS
TTGGATCCAATGTTACGACA+AGG 0.712596 2.1:+47039711 MS.gene85356:CDS
AGGGCATCTATAGCTGCACA+AGG 0.721472 2.1:-47039507 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATGTTAATTACAATACAT+TGG + chr2.1:47039692-47039711 MS.gene85356:CDS 15.0%
!!! TGTTATATTGATTGTTTATG+TGG - chr2.1:47040367-47040386 None:intergenic 20.0%
! ATCAATATAACACTTGTTTC+TGG + chr2.1:47040375-47040394 MS.gene85356:CDS 25.0%
! GAATAATTTAACTCAGTTTG+AGG - chr2.1:47040263-47040282 None:intergenic 25.0%
! TCAAATTCAAAGTAGTTACA+TGG - chr2.1:47039251-47039270 None:intergenic 25.0%
! TGAGAAAAAAGAAGAAACAA+TGG - chr2.1:47039406-47039425 None:intergenic 25.0%
!! ATCAATATGATCAATGCTTT+TGG + chr2.1:47039574-47039593 MS.gene85356:CDS 25.0%
!! TGAACAAACTATTCTTTTGA+AGG + chr2.1:47039863-47039882 MS.gene85356:CDS 25.0%
AATCCACTGATCTTTATCAA+AGG + chr2.1:47040162-47040181 MS.gene85356:CDS 30.0%
AGGATATAGTATTTGCTTAC+GGG + chr2.1:47040108-47040127 MS.gene85356:CDS 30.0%
ATGGAAACAAGGATGATATT+GGG - chr2.1:47039201-47039220 None:intergenic 30.0%
CAGGATATAGTATTTGCTTA+CGG + chr2.1:47040107-47040126 MS.gene85356:CDS 30.0%
CATCTGTCTTTGTTAGAAAA+TGG + chr2.1:47039424-47039443 MS.gene85356:CDS 30.0%
CATGTATCTCAGAAAATCTA+TGG - chr2.1:47040010-47040029 None:intergenic 30.0%
GTAGCACATATTGACATAAT+TGG + chr2.1:47040608-47040627 MS.gene85356:CDS 30.0%
TCAACTGCAAAAGAAAATTG+AGG + chr2.1:47040454-47040473 MS.gene85356:CDS 30.0%
! ACACATGTAGTTTTTCATCA+AGG - chr2.1:47040664-47040683 None:intergenic 30.0%
! TTTCTCCTTTTTCTTTCAAC+CGG - chr2.1:47039795-47039814 None:intergenic 30.0%
!! CAACTTGCTATCAAAATCAA+AGG - chr2.1:47039943-47039962 None:intergenic 30.0%
!!! ATCATGTGTTTTGAAGACAA+TGG + chr2.1:47039734-47039753 MS.gene85356:CDS 30.0%
AATGAATGAGAAGGAAGCAA+AGG + chr2.1:47039614-47039633 MS.gene85356:CDS 35.0%
GAACTTGATGAATTCATGTG+CGG + chr2.1:47040061-47040080 MS.gene85356:CDS 35.0%
GAAGCTCAACGTAGTTTAAA+GGG + chr2.1:47040428-47040447 MS.gene85356:CDS 35.0%
GATGGAAACAAGGATGATAT+TGG - chr2.1:47039202-47039221 None:intergenic 35.0%
GGATATAGTATTTGCTTACG+GGG + chr2.1:47040109-47040128 MS.gene85356:CDS 35.0%
TATTCTATCCCGATATACTG+AGG - chr2.1:47040528-47040547 None:intergenic 35.0%
TCTCAGAAAATCTATGGAAG+TGG - chr2.1:47040004-47040023 None:intergenic 35.0%
TCTCCTTTGATAAAGATCAG+TGG - chr2.1:47040168-47040187 None:intergenic 35.0%
TGGCTGTCTTAGAAGAATTT+AGG + chr2.1:47040084-47040103 MS.gene85356:CDS 35.0%
TGTCTTAGAAGAATTTAGGC+AGG + chr2.1:47040088-47040107 MS.gene85356:CDS 35.0%
TTCAAAGTAGTTACATGGTG+AGG - chr2.1:47039246-47039265 None:intergenic 35.0%
TTGCATCTGGAAAAAGCAAA+CGG + chr2.1:47040405-47040424 MS.gene85356:CDS 35.0%
! AAATAGCAAGCACGAGATTT+TGG + chr2.1:47039838-47039857 MS.gene85356:CDS 35.0%
! ACATAATTGGATCAGCCTTT+TGG + chr2.1:47040621-47040640 MS.gene85356:CDS 35.0%
! AGAGAGTCTTCTGAAAGTTA+TGG + chr2.1:47040575-47040594 MS.gene85356:CDS 35.0%
! ATTTTCCTCCTTCTTTCCAT+GGG + chr2.1:47039475-47039494 MS.gene85356:CDS 35.0%
! GAAGCAAAGGATTTTATCGA+TGG + chr2.1:47039627-47039646 MS.gene85356:CDS 35.0%
!! ACTATTCTTTTGAAGGAGCT+TGG + chr2.1:47039870-47039889 MS.gene85356:CDS 35.0%
!!! TGTTTTGAAGACAATGGTAG+AGG + chr2.1:47039740-47039759 MS.gene85356:CDS 35.0%
AAGACTCTCTATTCTCCTGA+TGG - chr2.1:47040565-47040584 None:intergenic 40.0%
ACAAGGATCCTCAGTATATC+GGG + chr2.1:47040517-47040536 MS.gene85356:CDS 40.0%
ACGTCTTTCATAGAACTTGG+TGG - chr2.1:47039367-47039386 None:intergenic 40.0%
AGACAATGTTCTCATCCATC+AGG + chr2.1:47040547-47040566 MS.gene85356:CDS 40.0%
AGCACGTCTTTCATAGAACT+TGG - chr2.1:47039370-47039389 None:intergenic 40.0%
ATGACTTTCCCATGGAAAGA+AGG - chr2.1:47039486-47039505 None:intergenic 40.0%
CATGATCCTTGTCGTAACAT+TGG - chr2.1:47039720-47039739 None:intergenic 40.0%
CCACGAAAGATATGCTTGAA+GGG - chr2.1:47039529-47039548 None:intergenic 40.0%
CTGATATAGTTCTCGCATAC+GGG + chr2.1:47039307-47039326 MS.gene85356:CDS 40.0%
CTTCAACTTACGTGATGAGA+TGG + chr2.1:47040225-47040244 MS.gene85356:CDS 40.0%
GACAAGGATCCTCAGTATAT+CGG + chr2.1:47040516-47040535 MS.gene85356:CDS 40.0%
GATATACTGAGGATCCTTGT+CGG - chr2.1:47040517-47040536 None:intergenic 40.0%
GCTGATATAGTTCTCGCATA+CGG + chr2.1:47039306-47039325 MS.gene85356:CDS 40.0%
GGAAGCTCAACGTAGTTTAA+AGG + chr2.1:47040427-47040446 MS.gene85356:CDS 40.0%
GGAGATTAACAATGTGAAGC+CGG + chr2.1:47039905-47039924 MS.gene85356:CDS 40.0%
GGTGGTCTTCTTGAAAACAA+AGG - chr2.1:47039349-47039368 None:intergenic 40.0%
TCCACGAAAGATATGCTTGA+AGG - chr2.1:47039530-47039549 None:intergenic 40.0%
TGCATCTGGAAAAAGCAAAC+GGG + chr2.1:47040406-47040425 MS.gene85356:CDS 40.0%
TTCAAGCATATCTTTCGTGG+AGG + chr2.1:47039529-47039548 MS.gene85356:CDS 40.0%
TTGGATCCAATGTTACGACA+AGG + chr2.1:47039711-47039730 MS.gene85356:CDS 40.0%
TTGTACGAGACTATCTTTCG+TGG + chr2.1:47040327-47040346 MS.gene85356:CDS 40.0%
! AATTGGATCAGCCTTTTGGT+TGG + chr2.1:47040625-47040644 MS.gene85356:CDS 40.0%
! AGTTTTTCATCAAGGATGCC+CGG - chr2.1:47040656-47040675 None:intergenic 40.0%
! ATATTCTTCAAGCACCGCAA+CGG - chr2.1:47039286-47039305 None:intergenic 40.0%
! CACGTAAGTTGAAGTGAAGA+AGG - chr2.1:47040219-47040238 None:intergenic 40.0%
! CATTTTCCTCCTTCTTTCCA+TGG + chr2.1:47039474-47039493 MS.gene85356:CDS 40.0%
!! TGTCAAGTGTTTTGAACTCG+AGG + chr2.1:47039161-47039180 MS.gene85356:CDS 40.0%
ACTGCTCGTGCATCAAAAGA+AGG - chr2.1:47040287-47040306 None:intergenic 45.0%
ACTTTCCCATGGAAAGAAGG+AGG - chr2.1:47039483-47039502 None:intergenic 45.0%
CACAAGGTATGACTTTCCCA+TGG - chr2.1:47039494-47039513 None:intergenic 45.0%
CCCTTCAAGCATATCTTTCG+TGG + chr2.1:47039526-47039545 MS.gene85356:CDS 45.0%
CTTGATGAATTCATGTGCGG+TGG + chr2.1:47040064-47040083 MS.gene85356:CDS 45.0%
GAAAATGCAGTTCCATCTGC+GGG - chr2.1:47039461-47039480 None:intergenic 45.0%
GAAGACAATGGTAGAGGATG+TGG + chr2.1:47039746-47039765 MS.gene85356:CDS 45.0%
GGAAAATGCAGTTCCATCTG+CGG - chr2.1:47039462-47039481 None:intergenic 45.0%
GTGAAGTTTCGAAGCAGTGA+TGG - chr2.1:47039220-47039239 None:intergenic 45.0%
GTGCTCCGGTTGAAAGAAAA+AGG + chr2.1:47039787-47039806 MS.gene85356:CDS 45.0%
GTGGTGAAGTACACTGAAGA+TGG + chr2.1:47039765-47039784 MS.gene85356:CDS 45.0%
TACGAGACTATCTTTCGTGG+AGG + chr2.1:47040330-47040349 MS.gene85356:CDS 45.0%
TCAAAGGACCTCACATACTC+CGG - chr2.1:47039927-47039946 None:intergenic 45.0%
TCTCGTACAATCTCAGCAGA+TGG - chr2.1:47040317-47040336 None:intergenic 45.0%
TGAACGCGGAATGAATGAGA+AGG + chr2.1:47039605-47039624 MS.gene85356:CDS 45.0%
TTCAGAGCTCTGTCATCGTT+TGG - chr2.1:47040044-47040063 None:intergenic 45.0%
! GTTTTTCATCAAGGATGCCC+GGG - chr2.1:47040655-47040674 None:intergenic 45.0%
! TCGAAGCAGTGATGGAAACA+AGG - chr2.1:47039212-47039231 None:intergenic 45.0%
!! CAAGTTGATGCCGTCTACAT+GGG + chr2.1:47039956-47039975 MS.gene85356:CDS 45.0%
!! TTCTGGAAGCTTGTTGCATC+TGG + chr2.1:47040392-47040411 MS.gene85356:CDS 45.0%
!!! GAAGGAGCTTGGTGTTTTTG+CGG + chr2.1:47039881-47039900 MS.gene85356:CDS 45.0%
!!! TTTTGGCGACTTGTTGAACG+CGG + chr2.1:47039591-47039610 MS.gene85356:CDS 45.0%
ATGTGAAGCCGGAGTATGTG+AGG + chr2.1:47039916-47039935 MS.gene85356:CDS 50.0%
CGAACGACAACCCATGTAGA+CGG - chr2.1:47039969-47039988 None:intergenic 50.0%
GATCCTTGTCGGAACATCAC+AGG - chr2.1:47040506-47040525 None:intergenic 50.0%
GATGAATTCTTGCGCCGTTG+CGG + chr2.1:47039269-47039288 MS.gene85356:CDS 50.0%
GCATCAATTCTTCCCGCAGA+TGG + chr2.1:47039446-47039465 MS.gene85356:CDS 50.0%
GTACACTGAAGATGGTGCTC+CGG + chr2.1:47039773-47039792 MS.gene85356:CDS 50.0%
TGGGTTGTCGTTCGGATAGA+TGG + chr2.1:47039975-47039994 MS.gene85356:CDS 50.0%
TTGCCTGTGATGTTCCGACA+AGG + chr2.1:47040500-47040519 MS.gene85356:CDS 50.0%
! AGGGCATCTATAGCTGCACA+AGG - chr2.1:47039510-47039529 None:intergenic 50.0%
! CGTCTACATGGGTTGTCGTT+CGG + chr2.1:47039967-47039986 MS.gene85356:CDS 50.0%
!! AGCCTTTTGGTTGGAACACC+CGG + chr2.1:47040634-47040653 MS.gene85356:CDS 50.0%
!! GCAAGTTGATGCCGTCTACA+TGG + chr2.1:47039955-47039974 MS.gene85356:CDS 50.0%
!! GTGTTTTGAACTCGAGGACG+AGG + chr2.1:47039167-47039186 MS.gene85356:CDS 50.0%
!! GCCTTTTGGTTGGAACACCC+GGG + chr2.1:47040635-47040654 MS.gene85356:CDS 55.0%
!!! GGAGCTTGGTGTTTTTGCGG+AGG + chr2.1:47039884-47039903 MS.gene85356:CDS 55.0%
GCCCGGGTGTTCCAACCAAA+AGG - chr2.1:47040639-47040658 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 47039138 47040697 47039138 ID=MS.gene85356
chr2.1 mRNA 47039138 47040697 47039138 ID=MS.gene85356.t1;Parent=MS.gene85356
chr2.1 exon 47039138 47040697 47039138 ID=MS.gene85356.t1.exon1;Parent=MS.gene85356.t1
chr2.1 CDS 47039138 47040697 47039138 ID=cds.MS.gene85356.t1;Parent=MS.gene85356.t1
Gene Sequence

>MS.gene85356

ATGGCAAACAGCAAATACGAGTATGTCAAGTGTTTTGAACTCGAGGACGAGGTTATGTTTCCCAATATCATCCTTGTTTCCATCACTGCTTCGAAACTTCACAAACCTCACCATGTAACTACTTTGAATTTGATGAATTCTTGCGCCGTTGCGGTGCTTGAAGAATATGCTGATATAGTTCTCGCATACGGGTTCAGTGATGAGTATACCTTTGTTTTCAAGAAGACCACCAAGTTCTATGAAAGACGTGCTAGCAAAATATTATCCATTGTTTCTTCTTTTTTCTCATCTGTCTTTGTTAGAAAATGGCATCAATTCTTCCCGCAGATGGAACTGCATTTTCCTCCTTCTTTCCATGGGAAAGTCATACCTTGTGCAGCTATAGATGCCCTTCAAGCATATCTTTCGTGGAGGCAGAATATCTGTCATTTGCAGAATCAATATGATCAATGCTTTTGGCGACTTGTTGAACGCGGAATGAATGAGAAGGAAGCAAAGGATTTTATCGATGGTGCTAAGAAGCGCGACTTAAATGATATTTTGTTTGATGAGTTTAATGTTAATTACAATACATTGGATCCAATGTTACGACAAGGATCATGTGTTTTGAAGACAATGGTAGAGGATGTGGTGAAGTACACTGAAGATGGTGCTCCGGTTGAAAGAAAAAGGAGAAAGATAAATACAGTGCACTACAAGAAAATAGCAAGCACGAGATTTTGGAATGAACAAACTATTCTTTTGAAGGAGCTTGGTGTTTTTGCGGAGGAGATTAACAATGTGAAGCCGGAGTATGTGAGGTCCTTTGATTTTGATAGCAAGTTGATGCCGTCTACATGGGTTGTCGTTCGGATAGATGGATGCCACTTCCATAGATTTTCTGAGATACATGAATTTGTGAAGCCAAACGATGACAGAGCTCTGAACTTGATGAATTCATGTGCGGTGGCTGTCTTAGAAGAATTTAGGCAGGATATAGTATTTGCTTACGGGGTTAGCGACGAGTACAGTTTCATTCTTAAGAAATCCACTGATCTTTATCAAAGGAGAGCTAGTAAAATCATTTCAGCAATTGTGTCCTTCTTCACTTCAACTTACGTGATGAGATGGAAAAATTTCTTTCCTCAAACTGAGTTAAATTATTCTCCTTCTTTTGATGCACGAGCAGTGTGCTATCCATCTGCTGAGATTGTACGAGACTATCTTTCGTGGAGGCAAGTCGATTGCCACATAAACAATCAATATAACACTTGTTTCTGGAAGCTTGTTGCATCTGGAAAAAGCAAACGGGAAGCTCAACGTAGTTTAAAGGGTGCTCAACTGCAAAAGAAAATTGAGGAATTAGCTATTGACTACAATAAATTGCCTGTGATGTTCCGACAAGGATCCTCAGTATATCGGGATAGAATAGACAATGTTCTCATCCATCAGGAGAATAGAGAGTCTTCTGAAAGTTATGGAAAAGTCATTGTAGCACATATTGACATAATTGGATCAGCCTTTTGGTTGGAACACCCGGGCATCCTTGATGAAAAACTACATGTGTTGAAGAAATGTTGA
Protein sequence

>MS.gene85356.t1

MANSKYEYVKCFELEDEVMFPNIILVSITASKLHKPHHVTTLNLMNSCAVAVLEEYADIVLAYGFSDEYTFVFKKTTKFYERRASKILSIVSSFFSSVFVRKWHQFFPQMELHFPPSFHGKVIPCAAIDALQAYLSWRQNICHLQNQYDQCFWRLVERGMNEKEAKDFIDGAKKRDLNDILFDEFNVNYNTLDPMLRQGSCVLKTMVEDVVKYTEDGAPVERKRRKINTVHYKKIASTRFWNEQTILLKELGVFAEEINNVKPEYVRSFDFDSKLMPSTWVVVRIDGCHFHRFSEIHEFVKPNDDRALNLMNSCAVAVLEEFRQDIVFAYGVSDEYSFILKKSTDLYQRRASKIISAIVSFFTSTYVMRWKNFFPQTELNYSPSFDARAVCYPSAEIVRDYLSWRQVDCHINNQYNTCFWKLVASGKSKREAQRSLKGAQLQKKIEELAIDYNKLPVMFRQGSSVYRDRIDNVLIHQENRESSESYGKVIVAHIDIIGSAFWLEHPGILDEKLHVLKKC