Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049666.t1 | XP_003600605.1 | 93.1 | 525 | 6 | 1 | 1 | 495 | 1 | 525 | 1.30E-262 | 915.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049666.t1 | O62703 | 42.1 | 478 | 237 | 7 | 53 | 492 | 85 | 560 | 1.8e-92 | 341.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049666.t1 | G7J7W2 | 93.1 | 525 | 6 | 1 | 1 | 495 | 1 | 525 | 9.3e-263 | 915.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049203 | MS.gene049666 | 0.810181 | 1.31E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene049824 | 0.802127 | 6.50E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene049825 | 0.808469 | 3.05E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene050355 | 0.804022 | 2.64E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene051594 | 0.822851 | 1.90E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene052582 | 0.804824 | 1.79E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene052584 | 0.822953 | 1.80E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene053226 | 0.853696 | 2.01E-61 | -1.69E-46 |
| MS.gene049666 | MS.gene05365 | 0.829176 | 5.96E-55 | -1.69E-46 |
| MS.gene049666 | MS.gene053998 | 0.833086 | 6.53E-56 | -1.69E-46 |
| MS.gene049666 | MS.gene055778 | 0.820148 | 8.00E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene056050 | 0.814261 | 1.69E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene056174 | 0.810688 | 1.02E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene057314 | 0.861579 | 9.29E-64 | -1.69E-46 |
| MS.gene049666 | MS.gene05954 | 0.814619 | 1.40E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene059935 | 0.820918 | 5.32E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene060429 | 0.807585 | 4.70E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene060521 | 0.815028 | 1.14E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene061266 | 0.809715 | 1.65E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene061594 | 0.958057 | 6.02E-116 | -1.69E-46 |
| MS.gene049666 | MS.gene06269 | 0.829317 | 5.51E-55 | -1.69E-46 |
| MS.gene049666 | MS.gene062713 | 0.801617 | 8.28E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene063407 | 0.807994 | 3.85E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene064321 | 0.802263 | 6.09E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene065559 | 0.80235 | 5.85E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene065793 | 0.813175 | 2.92E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene066267 | 0.816438 | 5.53E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene067059 | 0.847272 | 1.28E-59 | -1.69E-46 |
| MS.gene049666 | MS.gene068135 | 0.815494 | 8.98E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene068159 | 0.80754 | 4.81E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene068456 | 0.82201 | 2.98E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene070193 | 0.803887 | 2.81E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene070301 | 0.834406 | 3.05E-56 | -1.69E-46 |
| MS.gene049666 | MS.gene070680 | 0.805199 | 1.50E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene071322 | 0.835659 | 1.48E-56 | -1.69E-46 |
| MS.gene049666 | MS.gene071342 | 0.821518 | 3.87E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene071442 | 0.819687 | 1.02E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene071444 | 0.818515 | 1.88E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene071570 | 0.800078 | 1.71E-48 | -1.69E-46 |
| MS.gene049666 | MS.gene072280 | 0.836908 | 7.10E-57 | -1.69E-46 |
| MS.gene049666 | MS.gene072299 | 0.822137 | 2.78E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene072478 | 0.82469 | 7.04E-54 | -1.69E-46 |
| MS.gene049666 | MS.gene073139 | 0.801896 | 7.25E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene073665 | 0.820638 | 6.17E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene07394 | 0.8088 | 2.59E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene074320 | 0.805197 | 1.50E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene08589 | 0.833556 | 4.98E-56 | -1.69E-46 |
| MS.gene049666 | MS.gene08618 | 0.823288 | 1.50E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene08862 | 0.846684 | 1.86E-59 | -1.69E-46 |
| MS.gene049666 | MS.gene09233 | 0.843934 | 1.03E-58 | -1.69E-46 |
| MS.gene049666 | MS.gene21700 | 0.836058 | 1.17E-56 | -1.69E-46 |
| MS.gene049666 | MS.gene21928 | 0.80594 | 1.05E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene22255 | 0.837836 | 4.11E-57 | -1.69E-46 |
| MS.gene049666 | MS.gene22270 | 0.815591 | 8.55E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene22974 | 0.80098 | 1.12E-48 | -1.69E-46 |
| MS.gene049666 | MS.gene22976 | 0.803217 | 3.87E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene24608 | 0.811353 | 7.31E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene24623 | 0.812906 | 3.35E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene24897 | 0.804519 | 2.08E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene25207 | 0.830307 | 3.16E-55 | -1.69E-46 |
| MS.gene049666 | MS.gene25778 | 0.805544 | 1.27E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene28652 | 0.859656 | 3.56E-63 | -1.69E-46 |
| MS.gene049666 | MS.gene30085 | 0.811261 | 7.65E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene31142 | 0.810153 | 1.33E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene31523 | 0.823209 | 1.57E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene31658 | 0.817613 | 3.01E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene32229 | 0.803232 | 3.84E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene32419 | 0.815425 | 9.31E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene33131 | 0.807383 | 5.19E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene33650 | 0.804278 | 2.33E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene33853 | 0.804818 | 1.80E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene36046 | 0.813475 | 2.51E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene36496 | 0.822473 | 2.33E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene37027 | 0.815931 | 7.18E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene37028 | 0.804646 | 1.95E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene37029 | 0.830466 | 2.89E-55 | -1.69E-46 |
| MS.gene049666 | MS.gene37612 | 0.819613 | 1.06E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene38754 | 0.804362 | 2.24E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene38976 | 0.804336 | 2.27E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene40022 | 0.804866 | 1.76E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene40160 | 0.812708 | 3.70E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene43970 | 0.827726 | 1.33E-54 | -1.69E-46 |
| MS.gene049666 | MS.gene44077 | 0.800012 | 1.76E-48 | -1.69E-46 |
| MS.gene049666 | MS.gene44256 | 0.82291 | 1.84E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene45507 | 0.803001 | 4.29E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene45903 | 0.805617 | 1.22E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene50493 | 0.801025 | 1.09E-48 | -1.69E-46 |
| MS.gene049666 | MS.gene50615 | 0.819872 | 9.25E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene50986 | 0.834292 | 3.26E-56 | -1.69E-46 |
| MS.gene049666 | MS.gene52063 | 0.811265 | 7.63E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene52301 | 0.808918 | 2.45E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene54197 | 0.81874 | 1.67E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene54368 | 0.815338 | 9.73E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene54538 | 0.828494 | 8.71E-55 | -1.69E-46 |
| MS.gene049666 | MS.gene55818 | 0.815682 | 8.16E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene56067 | 0.816971 | 4.20E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene56468 | 0.827502 | 1.51E-54 | -1.69E-46 |
| MS.gene049666 | MS.gene56547 | 0.8016 | 8.34E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene56868 | 0.824915 | 6.23E-54 | -1.69E-46 |
| MS.gene049666 | MS.gene59369 | 0.831251 | 1.86E-55 | -1.69E-46 |
| MS.gene049666 | MS.gene59798 | 0.80758 | 4.72E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene60568 | 0.80124 | 9.88E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene61980 | 0.820166 | 7.92E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene62096 | 0.800281 | 1.55E-48 | -1.69E-46 |
| MS.gene049666 | MS.gene62491 | 0.801859 | 7.38E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene63988 | 0.834305 | 3.24E-56 | -1.69E-46 |
| MS.gene049666 | MS.gene64249 | 0.804644 | 1.96E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene66339 | 0.823824 | 1.12E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene67139 | 0.80908 | 2.26E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene67595 | 0.802145 | 6.45E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene67662 | 0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene68663 | 0.83178 | 1.37E-55 | -1.69E-46 |
| MS.gene049666 | MS.gene70655 | 0.811902 | 5.55E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene70656 | 0.82328 | 1.51E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene71613 | 0.800539 | 1.37E-48 | -1.69E-46 |
| MS.gene049666 | MS.gene71825 | 0.819332 | 1.23E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene71826 | 0.821804 | 3.32E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene72026 | 0.832704 | 8.12E-56 | -1.69E-46 |
| MS.gene049666 | MS.gene74257 | 0.817766 | 2.78E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene74869 | 0.8311 | 2.02E-55 | -1.69E-46 |
| MS.gene049666 | MS.gene75003 | 0.817729 | 2.83E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene75187 | 0.822327 | 2.51E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene79127 | 0.800917 | 1.15E-48 | -1.69E-46 |
| MS.gene049666 | MS.gene79253 | 0.81896 | 1.49E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene79448 | 0.824426 | 8.12E-54 | -1.69E-46 |
| MS.gene049666 | MS.gene79449 | 0.820658 | 6.11E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene82387 | 0.818447 | 1.95E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene83091 | 0.835661 | 1.47E-56 | -1.69E-46 |
| MS.gene049666 | MS.gene84454 | 0.801085 | 1.06E-48 | -1.69E-46 |
| MS.gene049666 | MS.gene84732 | 0.814354 | 1.61E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene84865 | 0.818989 | 1.47E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene85356 | 0.802518 | 5.40E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene85641 | 0.815212 | 1.04E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene87285 | 0.801914 | 7.19E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene90146 | 0.816886 | 4.39E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene90863 | 0.826632 | 2.44E-54 | -1.69E-46 |
| MS.gene049666 | MS.gene91333 | 0.801477 | 8.84E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene92059 | 0.837913 | 3.93E-57 | -1.69E-46 |
| MS.gene049666 | MS.gene92280 | 0.813829 | 2.10E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene93501 | 0.819642 | 1.04E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene95472 | 0.814522 | 1.48E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene97159 | 0.812448 | 4.22E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene97609 | 0.817916 | 2.57E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene97766 | 0.836402 | 9.56E-57 | -1.69E-46 |
| MS.gene049666 | MS.gene98612 | 0.802757 | 4.82E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene98828 | 0.811864 | 5.66E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene98953 | 0.842618 | 2.32E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47154 | MS.gene049666 | PPI |
| MS.gene74436 | MS.gene049666 | PPI |
| MS.gene55513 | MS.gene049666 | PPI |
| MS.gene074082 | MS.gene049666 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049666.t1 | MTR_3g064180 | 93.143 | 525 | 6 | 1 | 1 | 495 | 1 | 525 | 0.0 | 980 |
| MS.gene049666.t1 | MTR_8g023320 | 94.783 | 115 | 6 | 0 | 84 | 198 | 42 | 156 | 1.05e-66 | 213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049666.t1 | AT3G02710 | 71.857 | 533 | 108 | 4 | 1 | 495 | 1 | 529 | 0.0 | 726 |
Find 110 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGTTGGTTGCTGTCATTT+TGG | 0.177787 | 3.3:+57772452 | MS.gene049666:intron |
| AAAGATTCAGAAGTTCTTAA+TGG | 0.254674 | 3.3:+57772880 | MS.gene049666:CDS |
| TGATGTTGTTACGTTGATTC+AGG | 0.256713 | 3.3:+57770325 | MS.gene049666:CDS |
| GTGGCTGTTGGGGAAGATTA+AGG | 0.265756 | 3.3:+57770580 | MS.gene049666:CDS |
| GCAGTATGCATCGGAGATTT+TGG | 0.271538 | 3.3:+57770625 | MS.gene049666:CDS |
| GCGAAACGTTCGGGTTGATT+TGG | 0.286575 | 3.3:-57770158 | None:intergenic |
| GTTGATGCCGTTGGAGAATA+AGG | 0.287924 | 3.3:+57770808 | MS.gene049666:CDS |
| TATTATGAAGCAGAAGAAAT+TGG | 0.295478 | 3.3:+57770871 | MS.gene049666:CDS |
| TAAGCTTGTGAAGCTCTTCA+TGG | 0.319731 | 3.3:-57770199 | None:intergenic |
| ATCTGGACTTTATACTCTTC+AGG | 0.322599 | 3.3:+57772133 | MS.gene049666:CDS |
| TAGGAATATCATGACAATAT+TGG | 0.328004 | 3.3:+57772818 | MS.gene049666:intron |
| CTCTTCCTCATCCGAACTCT+TGG | 0.328264 | 3.3:-57770750 | None:intergenic |
| TTCAGAATCCGCGAAACGTT+CGG | 0.339156 | 3.3:-57770168 | None:intergenic |
| TCAGAATCCGCGAAACGTTC+GGG | 0.344397 | 3.3:-57770167 | None:intergenic |
| TGTGCTCGCTCCTTCTCTTC+TGG | 0.344836 | 3.3:-57772854 | None:intergenic |
| CACAAGCTTAAAGTTCTTGC+TGG | 0.345339 | 3.3:+57770212 | MS.gene049666:CDS |
| GACAATATTGGCGATCTTGA+TGG | 0.349058 | 3.3:+57772830 | MS.gene049666:CDS |
| CTCCTTCGAACGCCGATTGA+AGG | 0.356969 | 3.3:+57770109 | MS.gene049666:CDS |
| TACGGCGAATCAGAAGAAAT+TGG | 0.359095 | 3.3:+57770667 | MS.gene049666:CDS |
| GACGGCGTCGATTGTGGGTT+GGG | 0.368993 | 3.3:-57770057 | None:intergenic |
| TACAATCGTAAACTAGAATC+TGG | 0.374374 | 3.3:+57772116 | MS.gene049666:CDS |
| TTGTCGACGGCGTCGATTGT+GGG | 0.383086 | 3.3:-57770062 | None:intergenic |
| TGGCGTATGCCTCCGCGATA+AGG | 0.396871 | 3.3:+57770891 | MS.gene049666:CDS |
| ACGGCGAATCAGAAGAAATT+GGG | 0.402285 | 3.3:+57770668 | MS.gene049666:CDS |
| AAGAAATTGGGGCAGATGAA+TGG | 0.410742 | 3.3:+57770680 | MS.gene049666:CDS |
| TGGGGTGGATGTGATGCTTC+AGG | 0.413573 | 3.3:+57770700 | MS.gene049666:CDS |
| ACGTTTCGCGGATTCTGAAT+TGG | 0.416745 | 3.3:+57770172 | MS.gene049666:CDS |
| GGAGAGATCGATGTTGTTTG+TGG | 0.425799 | 3.3:-57770012 | None:intergenic |
| AAATCAACCCGAACGTTTCG+CGG | 0.427082 | 3.3:+57770160 | MS.gene049666:CDS |
| AGAAATTGGGGCAGATGAAT+GGG | 0.428528 | 3.3:+57770681 | MS.gene049666:CDS |
| GCATGTCAAGGATATACTTC+AGG | 0.429337 | 3.3:+57772647 | MS.gene049666:CDS |
| GCAGAATTTGCATCGGTTGT+CGG | 0.443160 | 3.3:+57770442 | MS.gene049666:CDS |
| ATGAGTGCGAGAAGATAGAT+AGG | 0.444249 | 3.3:+57771719 | MS.gene049666:CDS |
| GGATGTGATGCTTCAGGCGG+TGG | 0.444743 | 3.3:+57770706 | MS.gene049666:CDS |
| CGACGGCGTCGATTGTGGGT+TGG | 0.448251 | 3.3:-57770058 | None:intergenic |
| TGAGGTGAAACCGGCGGTGG+CGG | 0.453475 | 3.3:+57770526 | MS.gene049666:CDS |
| TGTTGGGGAAGATTAAGGTT+AGG | 0.455452 | 3.3:+57770585 | MS.gene049666:CDS |
| GGCGTATGCCTCCGCGATAA+GGG | 0.458877 | 3.3:+57770892 | MS.gene049666:CDS |
| CGAGAAGATAGATAGGCTAA+TGG | 0.461422 | 3.3:+57771726 | MS.gene049666:CDS |
| GTCAAAGGATCCCAAGAGTT+CGG | 0.461662 | 3.3:+57770739 | MS.gene049666:CDS |
| TGAGTGGTTGCGAGTGGTGG+TGG | 0.461980 | 3.3:-57769955 | None:intergenic |
| GGTGTCGTCGAATTTGCGTT+TGG | 0.463977 | 3.3:-57769979 | None:intergenic |
| GAATTTGATTGAGGTGAAAC+CGG | 0.464918 | 3.3:+57770517 | MS.gene049666:CDS |
| TGGAGCACCGGAGCTTTATC+CGG | 0.467966 | 3.3:+57770232 | MS.gene049666:CDS |
| CGAATTTGCGTTTGGATGAG+TGG | 0.468722 | 3.3:-57769971 | None:intergenic |
| TCTTCCTCATCCGAACTCTT+GGG | 0.471486 | 3.3:-57770749 | None:intergenic |
| TCAAATTGAGTTTGATGACT+TGG | 0.471831 | 3.3:+57771985 | MS.gene049666:CDS |
| TTCGGATGAGGAAGAGATGG+TGG | 0.473430 | 3.3:+57770757 | MS.gene049666:CDS |
| TTCCTTCAATCGGCGTTCGA+AGG | 0.479470 | 3.3:-57770111 | None:intergenic |
| GTGGAATCTTGAGGGGCTCT+AGG | 0.483156 | 3.3:+57771665 | MS.gene049666:CDS |
| AAGTTGTTGAAGTGGCTGTT+GGG | 0.484456 | 3.3:+57770569 | MS.gene049666:CDS |
| CTTTCCAGGTGGAATCTTGA+GGG | 0.489985 | 3.3:+57771657 | MS.gene049666:intron |
| GTTGTCGACGGCGTCGATTG+TGG | 0.497342 | 3.3:-57770063 | None:intergenic |
| GGTTCTTGTTGATGCGCTTG+TGG | 0.498065 | 3.3:+57770394 | MS.gene049666:CDS |
| GTTGGGGAAGATTAAGGTTA+GGG | 0.503090 | 3.3:+57770586 | MS.gene049666:CDS |
| GGCTAATGGAACTATACATC+AGG | 0.506522 | 3.3:+57771740 | MS.gene049666:CDS |
| AAAAGCTGAAACTGAACGGT+TGG | 0.509025 | 3.3:+57771961 | MS.gene049666:CDS |
| ACATTGAGGTTAACAAGATC+CGG | 0.510454 | 3.3:-57770251 | None:intergenic |
| TGCGATGACAAATTACCCTC+CGG | 0.510486 | 3.3:+57770925 | MS.gene049666:CDS |
| TAAAGTTCTTGCTGGAGCAC+CGG | 0.510985 | 3.3:+57770220 | MS.gene049666:CDS |
| TTTGCATCGGTTGTCGGAGA+AGG | 0.512034 | 3.3:+57770448 | MS.gene049666:CDS |
| AACCTTTCCTTATTCTCCAA+CGG | 0.513307 | 3.3:-57770815 | None:intergenic |
| GAAAGGTTTGTGAAAGCAGA+AGG | 0.526602 | 3.3:+57770830 | MS.gene049666:CDS |
| GGATGAGTGGTTGCGAGTGG+TGG | 0.531232 | 3.3:-57769958 | None:intergenic |
| AATTGAGTTTGATGACTTGG+AGG | 0.536575 | 3.3:+57771988 | MS.gene049666:CDS |
| GACAATTGAGAATTTGATTG+AGG | 0.537691 | 3.3:+57770508 | MS.gene049666:CDS |
| ATGTTGTTTGTTGATGCCGT+TGG | 0.538373 | 3.3:+57770799 | MS.gene049666:CDS |
| TCTTTCCAGGTGGAATCTTG+AGG | 0.544919 | 3.3:+57771656 | MS.gene049666:intron |
| GCATCAACAAGAACCTTAGC+AGG | 0.545350 | 3.3:-57770386 | None:intergenic |
| ATTTCTCGATTGCTTCGAGA+AGG | 0.547840 | 3.3:-57770034 | None:intergenic |
| GGATCCCAAGAGTTCGGATG+AGG | 0.548449 | 3.3:+57770745 | MS.gene049666:CDS |
| GTTGTTTGTGGAGGATGAAA+CGG | 0.559459 | 3.3:-57770000 | None:intergenic |
| GAAGTTGTTGAAGTGGCTGT+TGG | 0.565011 | 3.3:+57770568 | MS.gene049666:CDS |
| CAGACAATCTCCGCCACCGC+CGG | 0.566151 | 3.3:-57770536 | None:intergenic |
| TCGGTTGTCGGAGAAGGATG+CGG | 0.566965 | 3.3:+57770454 | MS.gene049666:CDS |
| GAAATTGGGGCAGATGAATG+GGG | 0.568740 | 3.3:+57770682 | MS.gene049666:CDS |
| TCAACAAAACGTTCACAAGC+CGG | 0.570628 | 3.3:-57770944 | None:intergenic |
| ACAAGATCCGGATAAAGCTC+CGG | 0.577304 | 3.3:-57770239 | None:intergenic |
| GATTGAGGTGAAACCGGCGG+TGG | 0.578618 | 3.3:+57770523 | MS.gene049666:CDS |
| TTTCCAGGTGGAATCTTGAG+GGG | 0.579676 | 3.3:+57771658 | MS.gene049666:intron |
| TGGTTGCGAGTGGTGGTGGA+TGG | 0.583149 | 3.3:-57769951 | None:intergenic |
| TTTCTCGATTGCTTCGAGAA+GGG | 0.583814 | 3.3:-57770033 | None:intergenic |
| TGCTTGTGCAGAATTTGCAT+CGG | 0.590572 | 3.3:+57770435 | MS.gene049666:CDS |
| GAGTTCGGATGAGGAAGAGA+TGG | 0.592926 | 3.3:+57770754 | MS.gene049666:CDS |
| TCTTGATGGACCAGAAGAGA+AGG | 0.605271 | 3.3:+57772844 | MS.gene049666:CDS |
| ATTGGGGCAGATGAATGGGG+TGG | 0.605769 | 3.3:+57770685 | MS.gene049666:CDS |
| GAGATCGATGTTGTTTGTGG+AGG | 0.607732 | 3.3:-57770009 | None:intergenic |
| GCTTGTGGATTGTAGTGTGT+TGG | 0.607878 | 3.3:+57770409 | MS.gene049666:CDS |
| TCAATCGGCGTTCGAAGGAG+AGG | 0.608106 | 3.3:-57770106 | None:intergenic |
| TGAGAATGATGAACCTGCTA+AGG | 0.609377 | 3.3:+57770373 | MS.gene049666:CDS |
| GTCAGGCATTCACAAATGAG+AGG | 0.612340 | 3.3:+57772582 | MS.gene049666:intron |
| GAGTAAAAGCTGAAACTGAA+CGG | 0.614348 | 3.3:+57771957 | MS.gene049666:CDS |
| TTCAACAAATCAACAATCGA+CGG | 0.618753 | 3.3:-57770278 | None:intergenic |
| GGTGGCGATGTATAAGTCAA+AGG | 0.624239 | 3.3:+57770724 | MS.gene049666:CDS |
| CAATCGACGGAACAACATTG+AGG | 0.625918 | 3.3:-57770265 | None:intergenic |
| TGCCGTTGGAGAATAAGGAA+AGG | 0.626114 | 3.3:+57770813 | MS.gene049666:CDS |
| TAGTAATAAGCAGTATGCAT+CGG | 0.627164 | 3.3:+57770616 | MS.gene049666:CDS |
| AGAAGACGAAGTTGTTGAAG+TGG | 0.628312 | 3.3:+57770561 | MS.gene049666:CDS |
| ACTTAGTAAACAGCATGTCA+AGG | 0.628328 | 3.3:+57772635 | MS.gene049666:CDS |
| CGGCGAATCAGAAGAAATTG+GGG | 0.632291 | 3.3:+57770669 | MS.gene049666:CDS |
| AAAATCAAGTGCCCTTATCG+CGG | 0.652002 | 3.3:-57770903 | None:intergenic |
| TTTGGATGAGTGGTTGCGAG+TGG | 0.653061 | 3.3:-57769961 | None:intergenic |
| GGTGGATGTGATGCTTCAGG+CGG | 0.654680 | 3.3:+57770703 | MS.gene049666:CDS |
| AGTTGTTGAAGTGGCTGTTG+GGG | 0.656007 | 3.3:+57770570 | MS.gene049666:CDS |
| ATCAAGTGCCCTTATCGCGG+AGG | 0.657323 | 3.3:-57770900 | None:intergenic |
| TGCTGCGGTTTATAATACGC+TGG | 0.663673 | 3.3:+57770484 | MS.gene049666:CDS |
| ACAAAACGTTCACAAGCCGG+AGG | 0.666267 | 3.3:-57770941 | None:intergenic |
| TTTGATTGAGGTGAAACCGG+CGG | 0.669349 | 3.3:+57770520 | MS.gene049666:CDS |
| CAAAACGTTCACAAGCCGGA+GGG | 0.670414 | 3.3:-57770940 | None:intergenic |
| GGATGCGGATGAGAATGCTG+CGG | 0.727804 | 3.3:+57770469 | MS.gene049666:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTAAAAAAGAAAAAATTA+AGG | - | chr3.3:57771615-57771634 | None:intergenic | 10.0% |
| !! | TTTGCTAAATAAAATAAATA+AGG | - | chr3.3:57772054-57772073 | None:intergenic | 10.0% |
| !!! | ATATTTTTGTAATTTATAGA+TGG | + | chr3.3:57772079-57772098 | MS.gene049666:intron | 10.0% |
| !! | ATAAATTAGTCAGTATAAAA+AGG | - | chr3.3:57772422-57772441 | None:intergenic | 15.0% |
| !! | ATATTACATAACTAATGATA+AGG | - | chr3.3:57771310-57771329 | None:intergenic | 15.0% |
| !! | CATATTAAAAAAAACATGTT+TGG | + | chr3.3:57772269-57772288 | MS.gene049666:intron | 15.0% |
| !! | TATTACATAACTAATGATAA+GGG | - | chr3.3:57771309-57771328 | None:intergenic | 15.0% |
| !! | TTGATTGTTATCTTATAAAT+TGG | + | chr3.3:57771086-57771105 | MS.gene049666:intron | 15.0% |
| !!! | TTTATATATGATTTTTCAGT+TGG | + | chr3.3:57772437-57772456 | MS.gene049666:intron | 15.0% |
| !! | ACCAAAAATTTAATTAAGTC+AGG | - | chr3.3:57772564-57772583 | None:intergenic | 20.0% |
| !!! | AAAGTATTAGTTTATATCTC+GGG | - | chr3.3:57771524-57771543 | None:intergenic | 20.0% |
| !!! | ACTTAATTAAATTTTTGGTC+AGG | + | chr3.3:57772565-57772584 | MS.gene049666:intron | 20.0% |
| !!! | CAAAGTATTAGTTTATATCT+CGG | - | chr3.3:57771525-57771544 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAGTAAATACCAG+TGG | + | chr3.3:57772342-57772361 | MS.gene049666:intron | 20.0% |
| ! | AAAGATTCAGAAGTTCTTAA+TGG | + | chr3.3:57772880-57772899 | MS.gene049666:CDS | 25.0% |
| ! | AAATTTAATTAAGTCAGGCA+AGG | - | chr3.3:57772559-57772578 | None:intergenic | 25.0% |
| ! | CAATCATGAACACAATATAA+GGG | - | chr3.3:57771787-57771806 | None:intergenic | 25.0% |
| ! | GTAAAAAGAACAAGAAAGAA+CGG | + | chr3.3:57771158-57771177 | MS.gene049666:intron | 25.0% |
| ! | GTATAGAATCATAAAAGATG+TGG | + | chr3.3:57771872-57771891 | MS.gene049666:intron | 25.0% |
| ! | TAACATGTATACTTTACCAT+TGG | + | chr3.3:57771340-57771359 | MS.gene049666:intron | 25.0% |
| ! | TAGGAATATCATGACAATAT+TGG | + | chr3.3:57772818-57772837 | MS.gene049666:intron | 25.0% |
| ! | TATTATGAAGCAGAAGAAAT+TGG | + | chr3.3:57770871-57770890 | MS.gene049666:CDS | 25.0% |
| ! | TTAATACAGAATGGAACAAA+TGG | - | chr3.3:57771821-57771840 | None:intergenic | 25.0% |
| !! | AAGTATTAGTTTATATCTCG+GGG | - | chr3.3:57771523-57771542 | None:intergenic | 25.0% |
| !! | GCCTGACTTAATTAAATTTT+TGG | + | chr3.3:57772560-57772579 | MS.gene049666:intron | 25.0% |
| !! | TATTTTGTTACTGTTAGTGT+TGG | + | chr3.3:57772712-57772731 | MS.gene049666:intron | 25.0% |
| !! | TTCTTGTTCTTTTTACTGAT+GGG | - | chr3.3:57771154-57771173 | None:intergenic | 25.0% |
| !! | TTTCTTGTTCTTTTTACTGA+TGG | - | chr3.3:57771155-57771174 | None:intergenic | 25.0% |
| AAAAGATGCAACTACTTACT+CGG | - | chr3.3:57772493-57772512 | None:intergenic | 30.0% | |
| AGAACCAGATTAATACAGAA+TGG | - | chr3.3:57771830-57771849 | None:intergenic | 30.0% | |
| AGAGCTTCTGAATTTGAATT+TGG | - | chr3.3:57772776-57772795 | None:intergenic | 30.0% | |
| AGCTTCTGAATTTGAATTTG+GGG | - | chr3.3:57772774-57772793 | None:intergenic | 30.0% | |
| ATCTCAACTGCAATTTGAAA+TGG | - | chr3.3:57772322-57772341 | None:intergenic | 30.0% | |
| ATGATAGAACTGTCTAATAC+GGG | + | chr3.3:57771461-57771480 | MS.gene049666:intron | 30.0% | |
| GACAATTGAGAATTTGATTG+AGG | + | chr3.3:57770508-57770527 | MS.gene049666:CDS | 30.0% | |
| GAGCTTCTGAATTTGAATTT+GGG | - | chr3.3:57772775-57772794 | None:intergenic | 30.0% | |
| GATGATAGAACTGTCTAATA+CGG | + | chr3.3:57771460-57771479 | MS.gene049666:intron | 30.0% | |
| GCAATCATGAACACAATATA+AGG | - | chr3.3:57771788-57771807 | None:intergenic | 30.0% | |
| TACAATCGTAAACTAGAATC+TGG | + | chr3.3:57772116-57772135 | MS.gene049666:CDS | 30.0% | |
| TAGTAATAAGCAGTATGCAT+CGG | + | chr3.3:57770616-57770635 | MS.gene049666:CDS | 30.0% | |
| TCACTAGTTGCTTCATTATT+TGG | + | chr3.3:57771211-57771230 | MS.gene049666:intron | 30.0% | |
| TCATGATATTCCTAAACCAT+GGG | - | chr3.3:57772812-57772831 | None:intergenic | 30.0% | |
| TCTAGAGAGTTCTACAAAAT+TGG | - | chr3.3:57771043-57771062 | None:intergenic | 30.0% | |
| TGAATTTGAATTTGGGGATT+GGG | - | chr3.3:57772768-57772787 | None:intergenic | 30.0% | |
| TGTTCCATTCTGTATTAATC+TGG | + | chr3.3:57771823-57771842 | MS.gene049666:intron | 30.0% | |
| TTCAACAAATCAACAATCGA+CGG | - | chr3.3:57770281-57770300 | None:intergenic | 30.0% | |
| TTTACTCTATCCGAATATCT+GGG | - | chr3.3:57771944-57771963 | None:intergenic | 30.0% | |
| ! | CTACAAAATTGGTTTAGAAG+TGG | - | chr3.3:57771032-57771051 | None:intergenic | 30.0% |
| ! | TCAAATTGAGTTTGATGACT+TGG | + | chr3.3:57771985-57772004 | MS.gene049666:CDS | 30.0% |
| ! | TTCAAATTCAGAAGCTCTAA+CGG | + | chr3.3:57772778-57772797 | MS.gene049666:intron | 30.0% |
| ! | TTTTACTCTATCCGAATATC+TGG | - | chr3.3:57771945-57771964 | None:intergenic | 30.0% |
| !! | ATAAAAAGGTGCTGTAAAAC+TGG | - | chr3.3:57772408-57772427 | None:intergenic | 30.0% |
| !! | GAACGTTTTGTTGATGTTTT+GGG | + | chr3.3:57770953-57770972 | MS.gene049666:CDS | 30.0% |
| !! | GTATTAATCTGGTTCTAAGT+TGG | + | chr3.3:57771834-57771853 | MS.gene049666:intron | 30.0% |
| !! | TGAACGTTTTGTTGATGTTT+TGG | + | chr3.3:57770952-57770971 | MS.gene049666:CDS | 30.0% |
| !! | TGGAACAAATGGATTAAGTT+CGG | - | chr3.3:57771810-57771829 | None:intergenic | 30.0% |
| !! | TTGAGTTTTGACATAGTATG+TGG | + | chr3.3:57771257-57771276 | MS.gene049666:intron | 30.0% |
| AACCTTTCCTTATTCTCCAA+CGG | - | chr3.3:57770818-57770837 | None:intergenic | 35.0% | |
| AATGGAACTATACATCAGGT+AGG | + | chr3.3:57771744-57771763 | MS.gene049666:intron | 35.0% | |
| ACATTGAGGTTAACAAGATC+CGG | - | chr3.3:57770254-57770273 | None:intergenic | 35.0% | |
| ACTTAGTAAACAGCATGTCA+AGG | + | chr3.3:57772635-57772654 | MS.gene049666:CDS | 35.0% | |
| ATCTGGACTTTATACTCTTC+AGG | + | chr3.3:57772133-57772152 | MS.gene049666:CDS | 35.0% | |
| CTGAATTTGAATTTGGGGAT+TGG | - | chr3.3:57772769-57772788 | None:intergenic | 35.0% | |
| GAACACAATATAAGGGAAAG+AGG | - | chr3.3:57771780-57771799 | None:intergenic | 35.0% | |
| GAATTTGATTGAGGTGAAAC+CGG | + | chr3.3:57770517-57770536 | MS.gene049666:CDS | 35.0% | |
| GAGTAAAAGCTGAAACTGAA+CGG | + | chr3.3:57771957-57771976 | MS.gene049666:CDS | 35.0% | |
| GTCATGATATTCCTAAACCA+TGG | - | chr3.3:57772813-57772832 | None:intergenic | 35.0% | |
| TGAGTACTCTATATCTTTCC+AGG | + | chr3.3:57771643-57771662 | MS.gene049666:intron | 35.0% | |
| TGATAGAACTGTCTAATACG+GGG | + | chr3.3:57771462-57771481 | MS.gene049666:intron | 35.0% | |
| TGCATATTTCAATTCACGCA+TGG | - | chr3.3:57771568-57771587 | None:intergenic | 35.0% | |
| TGCTTCATTATTTGGTAAGC+AGG | + | chr3.3:57771219-57771238 | MS.gene049666:intron | 35.0% | |
| ! | AATTGAGTTTGATGACTTGG+AGG | + | chr3.3:57771988-57772007 | MS.gene049666:CDS | 35.0% |
| ! | ACAGCTTTTGCAGCTTTTAT+GGG | + | chr3.3:57770983-57771002 | MS.gene049666:CDS | 35.0% |
| ! | CTTCGATGTTTTCCTTCAAT+CGG | - | chr3.3:57770124-57770143 | None:intergenic | 35.0% |
| ! | GAAATAACTCAAGGTACCAA+TGG | - | chr3.3:57771359-57771378 | None:intergenic | 35.0% |
| ! | GATTTTGTTGCAGAGTAGTA+CGG | + | chr3.3:57770649-57770668 | MS.gene049666:CDS | 35.0% |
| ! | GGATTATTTTCCCATGGTTT+AGG | + | chr3.3:57772799-57772818 | MS.gene049666:intron | 35.0% |
| ! | TTTTGCAGCTTTTATGGGTA+AGG | + | chr3.3:57770988-57771007 | MS.gene049666:intron | 35.0% |
| !! | TGATGTTGTTACGTTGATTC+AGG | + | chr3.3:57770325-57770344 | MS.gene049666:CDS | 35.0% |
| !!! | CTGTCATTTTGGGTCATATT+TGG | + | chr3.3:57772463-57772482 | MS.gene049666:CDS | 35.0% |
| !!! | TCTAACGGATTATTTTCCCA+TGG | + | chr3.3:57772793-57772812 | MS.gene049666:intron | 35.0% |
| AAAAGCTGAAACTGAACGGT+TGG | + | chr3.3:57771961-57771980 | MS.gene049666:CDS | 40.0% | |
| AAAATCAAGTGCCCTTATCG+CGG | - | chr3.3:57770906-57770925 | None:intergenic | 40.0% | |
| AAACTGGCATCTCATTCAGA+AGG | - | chr3.3:57772392-57772411 | None:intergenic | 40.0% | |
| AAGAAATTGGGGCAGATGAA+TGG | + | chr3.3:57770680-57770699 | MS.gene049666:CDS | 40.0% | |
| AAGTTGTTGAAGTGGCTGTT+GGG | + | chr3.3:57770569-57770588 | MS.gene049666:CDS | 40.0% | |
| ACGGCGAATCAGAAGAAATT+GGG | + | chr3.3:57770668-57770687 | MS.gene049666:CDS | 40.0% | |
| ACTACTACCAAGCCATTACT+TGG | - | chr3.3:57772186-57772205 | None:intergenic | 40.0% | |
| AGAAATTGGGGCAGATGAAT+GGG | + | chr3.3:57770681-57770700 | MS.gene049666:CDS | 40.0% | |
| AGAAGACGAAGTTGTTGAAG+TGG | + | chr3.3:57770561-57770580 | MS.gene049666:CDS | 40.0% | |
| ATGAGTGCGAGAAGATAGAT+AGG | + | chr3.3:57771719-57771738 | MS.gene049666:CDS | 40.0% | |
| ATTTCTCGATTGCTTCGAGA+AGG | - | chr3.3:57770037-57770056 | None:intergenic | 40.0% | |
| CACAAGCTTAAAGTTCTTGC+TGG | + | chr3.3:57770212-57770231 | MS.gene049666:CDS | 40.0% | |
| CATGACTGCTTCAAAACATG+GGG | + | chr3.3:57772234-57772253 | MS.gene049666:intron | 40.0% | |
| CCATGACTGCTTCAAAACAT+GGG | + | chr3.3:57772233-57772252 | MS.gene049666:intron | 40.0% | |
| CGAGAAGATAGATAGGCTAA+TGG | + | chr3.3:57771726-57771745 | MS.gene049666:CDS | 40.0% | |
| CTTCAGGTATATATCCTCTG+CGG | + | chr3.3:57772663-57772682 | MS.gene049666:intron | 40.0% | |
| GAAAGGTTTGTGAAAGCAGA+AGG | + | chr3.3:57770830-57770849 | MS.gene049666:CDS | 40.0% | |
| GACAATATTGGCGATCTTGA+TGG | + | chr3.3:57772830-57772849 | MS.gene049666:CDS | 40.0% | |
| GCATGTCAAGGATATACTTC+AGG | + | chr3.3:57772647-57772666 | MS.gene049666:CDS | 40.0% | |
| GGCTAATGGAACTATACATC+AGG | + | chr3.3:57771740-57771759 | MS.gene049666:CDS | 40.0% | |
| GTACTCTATATCTTTCCAGG+TGG | + | chr3.3:57771646-57771665 | MS.gene049666:intron | 40.0% | |
| GTTGGGGAAGATTAAGGTTA+GGG | + | chr3.3:57770586-57770605 | MS.gene049666:CDS | 40.0% | |
| GTTGTTTGTGGAGGATGAAA+CGG | - | chr3.3:57770003-57770022 | None:intergenic | 40.0% | |
| TAAGCTTGTGAAGCTCTTCA+TGG | - | chr3.3:57770202-57770221 | None:intergenic | 40.0% | |
| TACGGCGAATCAGAAGAAAT+TGG | + | chr3.3:57770667-57770686 | MS.gene049666:CDS | 40.0% | |
| TCAACAAAACGTTCACAAGC+CGG | - | chr3.3:57770947-57770966 | None:intergenic | 40.0% | |
| TCCATGACTGCTTCAAAACA+TGG | + | chr3.3:57772232-57772251 | MS.gene049666:intron | 40.0% | |
| TGACATAGTATGTGGACAGA+CGG | + | chr3.3:57771265-57771284 | MS.gene049666:intron | 40.0% | |
| TGAGAATGATGAACCTGCTA+AGG | + | chr3.3:57770373-57770392 | MS.gene049666:CDS | 40.0% | |
| TGCTTGTGCAGAATTTGCAT+CGG | + | chr3.3:57770435-57770454 | MS.gene049666:CDS | 40.0% | |
| TGTTGGGGAAGATTAAGGTT+AGG | + | chr3.3:57770585-57770604 | MS.gene049666:CDS | 40.0% | |
| TTATAAGCAGTAAGCACCAC+TGG | - | chr3.3:57772361-57772380 | None:intergenic | 40.0% | |
| TTATTCAATCATAGCCGCAG+AGG | - | chr3.3:57772680-57772699 | None:intergenic | 40.0% | |
| TTTCTCGATTGCTTCGAGAA+GGG | - | chr3.3:57770036-57770055 | None:intergenic | 40.0% | |
| ! | ATGTTGTTTGTTGATGCCGT+TGG | + | chr3.3:57770799-57770818 | MS.gene049666:CDS | 40.0% |
| ! | CTTTTTCCCTCCCAGATATT+CGG | + | chr3.3:57771931-57771950 | MS.gene049666:intron | 40.0% |
| ! | GACAGCTTTTGCAGCTTTTA+TGG | + | chr3.3:57770982-57771001 | MS.gene049666:CDS | 40.0% |
| ! | TACCTTGAGTTATTTCGCGA+AGG | + | chr3.3:57771363-57771382 | MS.gene049666:intron | 40.0% |
| !! | CGAAGGAGAGATTAACTTGT+TGG | + | chr3.3:57771380-57771399 | MS.gene049666:intron | 40.0% |
| !! | TCAGTTGGTTGCTGTCATTT+TGG | + | chr3.3:57772452-57772471 | MS.gene049666:intron | 40.0% |
| !!! | AGGAGAGGACGAGTTTTTTT+AGG | - | chr3.3:57770094-57770113 | None:intergenic | 40.0% |
| !!! | CAGTTGGTTGCTGTCATTTT+GGG | + | chr3.3:57772453-57772472 | MS.gene049666:intron | 40.0% |
| !!! | GGACGAGTTTTTTTAGGGTT+CGG | - | chr3.3:57770088-57770107 | None:intergenic | 40.0% |
| !!! | GGAGAGGACGAGTTTTTTTA+GGG | - | chr3.3:57770093-57770112 | None:intergenic | 40.0% |
| AAATCAACCCGAACGTTTCG+CGG | + | chr3.3:57770160-57770179 | MS.gene049666:CDS | 45.0% | |
| ACAAGATCCGGATAAAGCTC+CGG | - | chr3.3:57770242-57770261 | None:intergenic | 45.0% | |
| ACGTTTCGCGGATTCTGAAT+TGG | + | chr3.3:57770172-57770191 | MS.gene049666:CDS | 45.0% | |
| ACTCTATCCGAATATCTGGG+AGG | - | chr3.3:57771941-57771960 | None:intergenic | 45.0% | |
| ACTGATGCCAAGTAATGGCT+TGG | + | chr3.3:57772176-57772195 | MS.gene049666:intron | 45.0% | |
| AGAACTGTCTAATACGGGGA+TGG | + | chr3.3:57771466-57771485 | MS.gene049666:intron | 45.0% | |
| AGCCATTACTTGGCATCAGT+TGG | - | chr3.3:57772176-57772195 | None:intergenic | 45.0% | |
| AGTTGTTGAAGTGGCTGTTG+GGG | + | chr3.3:57770570-57770589 | MS.gene049666:CDS | 45.0% | |
| ATATCTCGGGGACAGTTCAA+GGG | - | chr3.3:57771511-57771530 | None:intergenic | 45.0% | |
| CAATCGACGGAACAACATTG+AGG | - | chr3.3:57770268-57770287 | None:intergenic | 45.0% | |
| CGAATTTGCGTTTGGATGAG+TGG | - | chr3.3:57769974-57769993 | None:intergenic | 45.0% | |
| CGGCGAATCAGAAGAAATTG+GGG | + | chr3.3:57770669-57770688 | MS.gene049666:CDS | 45.0% | |
| CTCCTTCGCGAAATAACTCA+AGG | - | chr3.3:57771368-57771387 | None:intergenic | 45.0% | |
| CTCTATCCGAATATCTGGGA+GGG | - | chr3.3:57771940-57771959 | None:intergenic | 45.0% | |
| CTTTCCAGGTGGAATCTTGA+GGG | + | chr3.3:57771657-57771676 | MS.gene049666:intron | 45.0% | |
| GAAATTGGGGCAGATGAATG+GGG | + | chr3.3:57770682-57770701 | MS.gene049666:CDS | 45.0% | |
| GAACAAGAAAGAACGGTACC+AGG | + | chr3.3:57771165-57771184 | MS.gene049666:intron | 45.0% | |
| GAAGTTGTTGAAGTGGCTGT+TGG | + | chr3.3:57770568-57770587 | MS.gene049666:CDS | 45.0% | |
| GACCAACTGATGCCAAGTAA+TGG | + | chr3.3:57772171-57772190 | MS.gene049666:intron | 45.0% | |
| GCATCAACAAGAACCTTAGC+AGG | - | chr3.3:57770389-57770408 | None:intergenic | 45.0% | |
| GGTGGCGATGTATAAGTCAA+AGG | + | chr3.3:57770724-57770743 | MS.gene049666:CDS | 45.0% | |
| GTCAAAGGATCCCAAGAGTT+CGG | + | chr3.3:57770739-57770758 | MS.gene049666:CDS | 45.0% | |
| GTCAGGCATTCACAAATGAG+AGG | + | chr3.3:57772582-57772601 | MS.gene049666:intron | 45.0% | |
| GTTGATGCCGTTGGAGAATA+AGG | + | chr3.3:57770808-57770827 | MS.gene049666:CDS | 45.0% | |
| TAAAGTTCTTGCTGGAGCAC+CGG | + | chr3.3:57770220-57770239 | MS.gene049666:CDS | 45.0% | |
| TATATCTCGGGGACAGTTCA+AGG | - | chr3.3:57771512-57771531 | None:intergenic | 45.0% | |
| TCTTCCTCATCCGAACTCTT+GGG | - | chr3.3:57770752-57770771 | None:intergenic | 45.0% | |
| TCTTTCCAGGTGGAATCTTG+AGG | + | chr3.3:57771656-57771675 | MS.gene049666:intron | 45.0% | |
| TGCCGTTGGAGAATAAGGAA+AGG | + | chr3.3:57770813-57770832 | MS.gene049666:CDS | 45.0% | |
| TGCGATGACAAATTACCCTC+CGG | + | chr3.3:57770925-57770944 | MS.gene049666:CDS | 45.0% | |
| TGCTGCGGTTTATAATACGC+TGG | + | chr3.3:57770484-57770503 | MS.gene049666:CDS | 45.0% | |
| TTCAGAATCCGCGAAACGTT+CGG | - | chr3.3:57770171-57770190 | None:intergenic | 45.0% | |
| TTTCCAGGTGGAATCTTGAG+GGG | + | chr3.3:57771658-57771677 | MS.gene049666:intron | 45.0% | |
| TTTGATTGAGGTGAAACCGG+CGG | + | chr3.3:57770520-57770539 | MS.gene049666:CDS | 45.0% | |
| ! | GAGATCGATGTTGTTTGTGG+AGG | - | chr3.3:57770012-57770031 | None:intergenic | 45.0% |
| ! | GCAGTATGCATCGGAGATTT+TGG | + | chr3.3:57770625-57770644 | MS.gene049666:CDS | 45.0% |
| ! | GCTTGTGGATTGTAGTGTGT+TGG | + | chr3.3:57770409-57770428 | MS.gene049666:CDS | 45.0% |
| ! | GGAGAGATCGATGTTGTTTG+TGG | - | chr3.3:57770015-57770034 | None:intergenic | 45.0% |
| ! | TCTTGATGGACCAGAAGAGA+AGG | + | chr3.3:57772844-57772863 | MS.gene049666:CDS | 45.0% |
| !! | GCAGAATTTGCATCGGTTGT+CGG | + | chr3.3:57770442-57770461 | MS.gene049666:CDS | 45.0% |
| !!! | CCCATGTTTTGAAGCAGTCA+TGG | - | chr3.3:57772236-57772255 | None:intergenic | 45.0% |
| !!! | TTTTAGGGTTCGGTTGTCGA+CGG | - | chr3.3:57770078-57770097 | None:intergenic | 45.0% |
| ACAAAACGTTCACAAGCCGG+AGG | - | chr3.3:57770944-57770963 | None:intergenic | 50.0% | |
| CAAAACGTTCACAAGCCGGA+GGG | - | chr3.3:57770943-57770962 | None:intergenic | 50.0% | |
| CAAGAAAGAACGGTACCAGG+AGG | + | chr3.3:57771168-57771187 | MS.gene049666:intron | 50.0% | |
| CTCTTCCTCATCCGAACTCT+TGG | - | chr3.3:57770753-57770772 | None:intergenic | 50.0% | |
| CTGGCATCTCATTCAGAAGG+CGG | - | chr3.3:57772389-57772408 | None:intergenic | 50.0% | |
| GAGTTCGGATGAGGAAGAGA+TGG | + | chr3.3:57770754-57770773 | MS.gene049666:CDS | 50.0% | |
| GGTTCTTGTTGATGCGCTTG+TGG | + | chr3.3:57770394-57770413 | MS.gene049666:CDS | 50.0% | |
| GTGGCTGTTGGGGAAGATTA+AGG | + | chr3.3:57770580-57770599 | MS.gene049666:CDS | 50.0% | |
| TATCTCGGGGACAGTTCAAG+GGG | - | chr3.3:57771510-57771529 | None:intergenic | 50.0% | |
| TCAGAATCCGCGAAACGTTC+GGG | - | chr3.3:57770170-57770189 | None:intergenic | 50.0% | |
| TTCCTTCAATCGGCGTTCGA+AGG | - | chr3.3:57770114-57770133 | None:intergenic | 50.0% | |
| TTCGGATGAGGAAGAGATGG+TGG | + | chr3.3:57770757-57770776 | MS.gene049666:CDS | 50.0% | |
| TTTGGATGAGTGGTTGCGAG+TGG | - | chr3.3:57769964-57769983 | None:intergenic | 50.0% | |
| ! | GGTGTCGTCGAATTTGCGTT+TGG | - | chr3.3:57769982-57770001 | None:intergenic | 50.0% |
| !! | GCGAAACGTTCGGGTTGATT+TGG | - | chr3.3:57770161-57770180 | None:intergenic | 50.0% |
| !! | TTTGCATCGGTTGTCGGAGA+AGG | + | chr3.3:57770448-57770467 | MS.gene049666:CDS | 50.0% |
| ACGGTACCAGGAGGAGTTAG+AGG | + | chr3.3:57771177-57771196 | MS.gene049666:intron | 55.0% | |
| ATCAAGTGCCCTTATCGCGG+AGG | - | chr3.3:57770903-57770922 | None:intergenic | 55.0% | |
| ATCTCGGGGACAGTTCAAGG+GGG | - | chr3.3:57771509-57771528 | None:intergenic | 55.0% | |
| ATTGGGGCAGATGAATGGGG+TGG | + | chr3.3:57770685-57770704 | MS.gene049666:CDS | 55.0% | |
| GGATCCCAAGAGTTCGGATG+AGG | + | chr3.3:57770745-57770764 | MS.gene049666:CDS | 55.0% | |
| GGATGCGGATGAGAATGCTG+CGG | + | chr3.3:57770469-57770488 | MS.gene049666:CDS | 55.0% | |
| GGTGGATGTGATGCTTCAGG+CGG | + | chr3.3:57770703-57770722 | MS.gene049666:CDS | 55.0% | |
| GTGGAATCTTGAGGGGCTCT+AGG | + | chr3.3:57771665-57771684 | MS.gene049666:CDS | 55.0% | |
| TCAATCGGCGTTCGAAGGAG+AGG | - | chr3.3:57770109-57770128 | None:intergenic | 55.0% | |
| TCGGTTGTCGGAGAAGGATG+CGG | + | chr3.3:57770454-57770473 | MS.gene049666:CDS | 55.0% | |
| TGGGGTGGATGTGATGCTTC+AGG | + | chr3.3:57770700-57770719 | MS.gene049666:CDS | 55.0% | |
| TGTGCTCGCTCCTTCTCTTC+TGG | - | chr3.3:57772857-57772876 | None:intergenic | 55.0% | |
| TTCGCTCCTCTAACTCCTCC+TGG | - | chr3.3:57771186-57771205 | None:intergenic | 55.0% | |
| ! | CTCCTTCGAACGCCGATTGA+AGG | + | chr3.3:57770109-57770128 | MS.gene049666:CDS | 55.0% |
| !! | TGGAGCACCGGAGCTTTATC+CGG | + | chr3.3:57770232-57770251 | MS.gene049666:CDS | 55.0% |
| !! | TTGTCGACGGCGTCGATTGT+GGG | - | chr3.3:57770065-57770084 | None:intergenic | 55.0% |
| GAGCCCCTCAAGATTCCACC+TGG | - | chr3.3:57771664-57771683 | None:intergenic | 60.0% | |
| GATTGAGGTGAAACCGGCGG+TGG | + | chr3.3:57770523-57770542 | MS.gene049666:CDS | 60.0% | |
| GGATGAGTGGTTGCGAGTGG+TGG | - | chr3.3:57769961-57769980 | None:intergenic | 60.0% | |
| GGATGTGATGCTTCAGGCGG+TGG | + | chr3.3:57770706-57770725 | MS.gene049666:CDS | 60.0% | |
| GGCGTATGCCTCCGCGATAA+GGG | + | chr3.3:57770892-57770911 | MS.gene049666:CDS | 60.0% | |
| TCTCGGGGACAGTTCAAGGG+GGG | - | chr3.3:57771508-57771527 | None:intergenic | 60.0% | |
| TGAGTGGTTGCGAGTGGTGG+TGG | - | chr3.3:57769958-57769977 | None:intergenic | 60.0% | |
| TGGCGTATGCCTCCGCGATA+AGG | + | chr3.3:57770891-57770910 | MS.gene049666:CDS | 60.0% | |
| !! | GACGGCGTCGATTGTGGGTT+GGG | - | chr3.3:57770060-57770079 | None:intergenic | 60.0% |
| !! | GTTGTCGACGGCGTCGATTG+TGG | - | chr3.3:57770066-57770085 | None:intergenic | 60.0% |
| !! | TGGTTGCGAGTGGTGGTGGA+TGG | - | chr3.3:57769954-57769973 | None:intergenic | 60.0% |
| CAGACAATCTCCGCCACCGC+CGG | - | chr3.3:57770539-57770558 | None:intergenic | 65.0% | |
| TGAGGTGAAACCGGCGGTGG+CGG | + | chr3.3:57770526-57770545 | MS.gene049666:CDS | 65.0% | |
| !! | CGACGGCGTCGATTGTGGGT+TGG | - | chr3.3:57770061-57770080 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 57769945 | 57772910 | 57769945 | ID=MS.gene049666 |
| chr3.3 | mRNA | 57769945 | 57772910 | 57769945 | ID=MS.gene049666.t1;Parent=MS.gene049666 |
| chr3.3 | exon | 57769945 | 57771004 | 57769945 | ID=MS.gene049666.t1.exon1;Parent=MS.gene049666.t1 |
| chr3.3 | CDS | 57769945 | 57771004 | 57769945 | ID=cds.MS.gene049666.t1;Parent=MS.gene049666.t1 |
| chr3.3 | exon | 57771665 | 57771761 | 57771665 | ID=MS.gene049666.t1.exon2;Parent=MS.gene049666.t1 |
| chr3.3 | CDS | 57771665 | 57771761 | 57771665 | ID=cds.MS.gene049666.t1;Parent=MS.gene049666.t1 |
| chr3.3 | exon | 57771946 | 57772009 | 57771946 | ID=MS.gene049666.t1.exon3;Parent=MS.gene049666.t1 |
| chr3.3 | CDS | 57771946 | 57772009 | 57771946 | ID=cds.MS.gene049666.t1;Parent=MS.gene049666.t1 |
| chr3.3 | exon | 57772098 | 57772154 | 57772098 | ID=MS.gene049666.t1.exon4;Parent=MS.gene049666.t1 |
| chr3.3 | CDS | 57772098 | 57772154 | 57772098 | ID=cds.MS.gene049666.t1;Parent=MS.gene049666.t1 |
| chr3.3 | exon | 57772456 | 57772493 | 57772456 | ID=MS.gene049666.t1.exon5;Parent=MS.gene049666.t1 |
| chr3.3 | CDS | 57772456 | 57772493 | 57772456 | ID=cds.MS.gene049666.t1;Parent=MS.gene049666.t1 |
| chr3.3 | exon | 57772587 | 57772668 | 57772587 | ID=MS.gene049666.t1.exon6;Parent=MS.gene049666.t1 |
| chr3.3 | CDS | 57772587 | 57772668 | 57772587 | ID=cds.MS.gene049666.t1;Parent=MS.gene049666.t1 |
| chr3.3 | exon | 57772821 | 57772910 | 57772821 | ID=MS.gene049666.t1.exon7;Parent=MS.gene049666.t1 |
| chr3.3 | CDS | 57772821 | 57772910 | 57772821 | ID=cds.MS.gene049666.t1;Parent=MS.gene049666.t1 |
| Gene Sequence |
| Protein sequence |
