Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86546.t1 | XP_003612367.1 | 94.8 | 833 | 41 | 2 | 1 | 832 | 15 | 846 | 0.00E+00 | 1530.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86546.t1 | G7K186 | 94.8 | 833 | 41 | 2 | 1 | 832 | 15 | 846 | 0.0e+00 | 1530.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051541 | MS.gene86546 | 0.81488 | 1.23E-51 | -1.69E-46 |
| MS.gene052493 | MS.gene86546 | 0.806027 | 1.00E-49 | -1.69E-46 |
| MS.gene052586 | MS.gene86546 | 0.813884 | 2.04E-51 | -1.69E-46 |
| MS.gene055327 | MS.gene86546 | 0.80225 | 6.13E-49 | -1.69E-46 |
| MS.gene056538 | MS.gene86546 | 0.824425 | 8.13E-54 | -1.69E-46 |
| MS.gene058429 | MS.gene86546 | 0.81329 | 2.76E-51 | -1.69E-46 |
| MS.gene059170 | MS.gene86546 | 0.802394 | 5.73E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene86546 | 0.862769 | 4.01E-64 | -1.69E-46 |
| MS.gene060932 | MS.gene86546 | 0.806086 | 9.76E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86546.t1 | MTR_5g024240 | 96.399 | 833 | 28 | 2 | 1 | 832 | 15 | 846 | 0.0 | 1642 |
| MS.gene86546.t1 | MTR_5g025350 | 73.200 | 250 | 35 | 3 | 439 | 682 | 12 | 235 | 3.25e-113 | 345 |
| MS.gene86546.t1 | MTR_5g025380 | 74.453 | 137 | 19 | 2 | 601 | 736 | 5 | 126 | 6.94e-56 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86546.t1 | AT2G17550 | 41.183 | 862 | 374 | 32 | 1 | 831 | 15 | 774 | 1.03e-158 | 482 |
| MS.gene86546.t1 | AT2G17550 | 41.771 | 802 | 335 | 31 | 60 | 831 | 1 | 700 | 1.99e-150 | 458 |
Find 142 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTATTCACTTGATAATT+TGG | 0.153873 | 5.1:+14939804 | MS.gene86546:CDS |
| ATTCAGACTCAGACGGTTTC+TGG | 0.172392 | 5.1:-14939381 | None:intergenic |
| CTGGTTTATACTTTGGTTCT+TGG | 0.181940 | 5.1:+14939458 | MS.gene86546:CDS |
| TAAAAGAATAAGTGAAAATA+TGG | 0.225343 | 5.1:+14937186 | MS.gene86546:CDS |
| GATGGATGGAGCCGGAATTT+TGG | 0.234500 | 5.1:+14937334 | MS.gene86546:CDS |
| CTTGTGAGCATGGACTTTCT+TGG | 0.235543 | 5.1:-14934933 | None:intergenic |
| GAATCACTTTCAGTTGTTCT+TGG | 0.245622 | 5.1:+14939646 | MS.gene86546:CDS |
| CTTACCGGTAATTCTCCTTC+TGG | 0.246471 | 5.1:-14935264 | None:intergenic |
| GTTATAAGATTTGATCATTA+AGG | 0.248170 | 5.1:-14937602 | None:intergenic |
| AGGAACTGTTGAAGTTAGTA+TGG | 0.285855 | 5.1:+14939740 | MS.gene86546:CDS |
| AGAGATTTACTTGTTGCTTC+TGG | 0.294038 | 5.1:+14939439 | MS.gene86546:CDS |
| GCTAGAAACACTTCCGATTT+CGG | 0.300734 | 5.1:-14937461 | None:intergenic |
| GCCTTTGTTCTCCAAAATTC+CGG | 0.301116 | 5.1:-14937345 | None:intergenic |
| TGGAATAAGTCTTTGTTAAG+AGG | 0.301570 | 5.1:+14939478 | MS.gene86546:CDS |
| TGAATCTCTACTGATAAATT+CGG | 0.305013 | 5.1:-14938001 | None:intergenic |
| AAATACAAACAGGATCTTTC+AGG | 0.313229 | 5.1:+14938166 | MS.gene86546:CDS |
| AGCAAAACTGTATCTCAAAT+TGG | 0.317168 | 5.1:-14938427 | None:intergenic |
| GCAGTGTTCATGAAGACTTT+TGG | 0.334930 | 5.1:+14939005 | MS.gene86546:CDS |
| ATTTGACGAGCAATAAGTTT+AGG | 0.338979 | 5.1:-14937868 | None:intergenic |
| CAATGAAGAGATCAATATAT+TGG | 0.342843 | 5.1:+14939867 | MS.gene86546:CDS |
| ATATCAAGCAGCAAGGTTTC+AGG | 0.359927 | 5.1:+14937423 | MS.gene86546:CDS |
| GACATCAGCTCTGGTTTAAC+TGG | 0.360505 | 5.1:+14939109 | MS.gene86546:CDS |
| CTTAGAGTTCTGCTCTTTGA+AGG | 0.378221 | 5.1:-14937562 | None:intergenic |
| TCAAGATCAGGAACATCATT+TGG | 0.380795 | 5.1:+14938270 | MS.gene86546:CDS |
| ATGGAAGGAGTTCAGTTAGT+TGG | 0.381437 | 5.1:+14937236 | MS.gene86546:CDS |
| TGTTCAAAGTTTGCCGAAAT+CGG | 0.382797 | 5.1:+14937448 | MS.gene86546:CDS |
| GTTGCTTCTGGTTTATACTT+TGG | 0.384654 | 5.1:+14939451 | MS.gene86546:CDS |
| TTACCGGTAATTCTCCTTCT+GGG | 0.394484 | 5.1:-14935263 | None:intergenic |
| TATTCAATCATGAAGAGAAT+TGG | 0.394633 | 5.1:+14937683 | MS.gene86546:CDS |
| GATACATATGCAAAGCCTAT+TGG | 0.399418 | 5.1:+14939502 | MS.gene86546:CDS |
| GAATCTCTACTGATAAATTC+GGG | 0.401716 | 5.1:-14938000 | None:intergenic |
| GAGAATTGGACTAGTTCAAC+AGG | 0.404604 | 5.1:+14937697 | MS.gene86546:CDS |
| GAAATGAATCGAATTCAATA+TGG | 0.405359 | 5.1:-14937285 | None:intergenic |
| TTGAGTTCAATCCCTTGGTC+TGG | 0.405396 | 5.1:+14939838 | MS.gene86546:CDS |
| AAGCCTTGTGGCAAGGTTGA+TGG | 0.415899 | 5.1:+14937117 | MS.gene86546:CDS |
| AACATTTGAGTTCAATCCCT+TGG | 0.418429 | 5.1:+14939833 | MS.gene86546:CDS |
| TGGAAGGAGTTCAGTTAGTT+GGG | 0.424198 | 5.1:+14937237 | MS.gene86546:CDS |
| TCGTCTCTTGAGGACAAATC+AGG | 0.438083 | 5.1:-14939061 | None:intergenic |
| CGGCCCAGAAGGAGAATTAC+CGG | 0.440212 | 5.1:+14935260 | MS.gene86546:CDS |
| AGCCTTGTGGCAAGGTTGAT+GGG | 0.441746 | 5.1:+14937118 | MS.gene86546:CDS |
| GACAAATCAGGAGTTGATAC+TGG | 0.442829 | 5.1:-14939049 | None:intergenic |
| ATCAACCTTGCCACAAGGCT+TGG | 0.445266 | 5.1:-14937115 | None:intergenic |
| GATGTTCCTGATCTTGATAC+AGG | 0.455850 | 5.1:-14938264 | None:intergenic |
| CAACCGCTTCAAGCTTCCTC+CGG | 0.459478 | 5.1:-14938338 | None:intergenic |
| AAGGATCTTACAAGGTTCCT+TGG | 0.460932 | 5.1:-14938234 | None:intergenic |
| GATCAATATATTGGAAAGAG+AGG | 0.461233 | 5.1:+14939876 | MS.gene86546:CDS |
| AAAAGAATAAGTGAAAATAT+GGG | 0.462177 | 5.1:+14937187 | MS.gene86546:CDS |
| TCATGATTGAATATGCAATC+AGG | 0.468328 | 5.1:-14937673 | None:intergenic |
| CTGATAAATTCGGGGACACT+TGG | 0.469625 | 5.1:-14937991 | None:intergenic |
| TCGGGAACATCCACAGGAAA+AGG | 0.478838 | 5.1:+14937369 | MS.gene86546:CDS |
| TTTGAAATGTGCAGATGAAT+GGG | 0.480380 | 5.1:+14938122 | MS.gene86546:CDS |
| GAAGAAACAGAAATACAAAC+AGG | 0.481676 | 5.1:+14938156 | MS.gene86546:CDS |
| TCTGCTCCTGTATCAAGATC+AGG | 0.482542 | 5.1:+14938258 | MS.gene86546:CDS |
| GGAATAAGTCTTTGTTAAGA+GGG | 0.490427 | 5.1:+14939479 | MS.gene86546:CDS |
| AATTTATCAGTAGAGATTCA+AGG | 0.492213 | 5.1:+14938004 | MS.gene86546:CDS |
| AGTTCAACAGGGACTTTACC+AGG | 0.494157 | 5.1:+14937709 | MS.gene86546:CDS |
| GAAACCGTCTGAGTCTGAAT+TGG | 0.496615 | 5.1:+14939384 | MS.gene86546:CDS |
| TTGCCGTGTGCTTGATCGAT+TGG | 0.498798 | 5.1:-14937086 | None:intergenic |
| TCTCTTATGTAAGATTCTGC+TGG | 0.500088 | 5.1:-14939421 | None:intergenic |
| CTTCCTCCGGATATGAGCCC+CGG | 0.510820 | 5.1:-14938325 | None:intergenic |
| GCAACAGGTTTAGTGTCTAC+AGG | 0.513735 | 5.1:-14937154 | None:intergenic |
| TCCATGTTGTCGCCGCCTCA+AGG | 0.519717 | 5.1:+14939715 | MS.gene86546:CDS |
| AACAGTTCCTTTCCTTGAGG+CGG | 0.522924 | 5.1:-14939727 | None:intergenic |
| GCAATAAGTTTAGGATCAGA+TGG | 0.523659 | 5.1:-14937859 | None:intergenic |
| GAATGATGAAAATTCTATGA+AGG | 0.523675 | 5.1:+14939573 | MS.gene86546:CDS |
| TTTCACAAAGTTAAAGATGA+CGG | 0.527796 | 5.1:+14937304 | MS.gene86546:CDS |
| TGGTAAGAGAAATCAATCAA+TGG | 0.527992 | 5.1:+14938467 | MS.gene86546:CDS |
| ACACTGCTGCACACAGATGC+AGG | 0.529299 | 5.1:-14938989 | None:intergenic |
| AATAATCGTTATTCAAACGC+TGG | 0.532520 | 5.1:+14937031 | MS.gene86546:CDS |
| TTGAATATGCAATCAGGACC+AGG | 0.536062 | 5.1:-14937667 | None:intergenic |
| AGAGAATCTGAACAGCGAAA+AGG | 0.539618 | 5.1:+14937498 | MS.gene86546:CDS |
| CTTGTGATATCTCTCATTGT+CGG | 0.539942 | 5.1:-14938516 | None:intergenic |
| AGGTTTCAAGATAACGATCC+TGG | 0.540036 | 5.1:-14937647 | None:intergenic |
| TTGTTGATTTGGCAGAGCTA+AGG | 0.541285 | 5.1:+14939308 | MS.gene86546:intron |
| CACAGCAGTCTCGTCTCTTG+AGG | 0.541373 | 5.1:-14939071 | None:intergenic |
| GAAAGCTTCTACTAGAGGAC+CGG | 0.541402 | 5.1:+14938292 | MS.gene86546:CDS |
| ATTATCAAGTAGAAGAAGAC+TGG | 0.542682 | 5.1:+14937002 | MS.gene86546:CDS |
| TTCAAGATAACGATCCTGGT+TGG | 0.547288 | 5.1:-14937643 | None:intergenic |
| CTGCACACAGATGCAGGACT+CGG | 0.548951 | 5.1:-14938983 | None:intergenic |
| CTGAATCTAGACAGTGTCAA+AGG | 0.551664 | 5.1:-14939673 | None:intergenic |
| TATGATGTCTCTTGTGAGCA+TGG | 0.552181 | 5.1:-14934943 | None:intergenic |
| AGTGAATAAAGAGACATATC+CGG | 0.556492 | 5.1:-14939793 | None:intergenic |
| AAGGCGTCGGGAACATCCAC+AGG | 0.557978 | 5.1:+14937363 | MS.gene86546:CDS |
| AAAGATGACGGCGATGATGA+TGG | 0.560500 | 5.1:+14937316 | MS.gene86546:CDS |
| GTGTCTCAATATCACTTCCT+CGG | 0.563040 | 5.1:-14937822 | None:intergenic |
| CATTGATTATTCCAGACCAA+GGG | 0.564059 | 5.1:-14939849 | None:intergenic |
| GCCTTGTGGCAAGGTTGATG+GGG | 0.567662 | 5.1:+14937119 | MS.gene86546:CDS |
| ACAAATCAAGCAAAATCTTG+TGG | 0.568803 | 5.1:-14939618 | None:intergenic |
| GTTGTCGCCGCCTCAAGGAA+AGG | 0.569359 | 5.1:+14939720 | MS.gene86546:CDS |
| ACAGAGAGTTGTTGTCTCCA+AGG | 0.575318 | 5.1:+14938217 | MS.gene86546:CDS |
| AACTGTCGGAAAAGGTTATG+TGG | 0.576766 | 5.1:+14937798 | MS.gene86546:CDS |
| TGTTTCGTTATATCCTTCAC+CGG | 0.577070 | 5.1:+14939774 | MS.gene86546:CDS |
| CCGTCGTTCATAAGAACTGT+TGG | 0.578230 | 5.1:-14938543 | None:intergenic |
| GGAACTGTTGAAGTTAGTAT+GGG | 0.578282 | 5.1:+14939741 | MS.gene86546:CDS |
| TCTCAGAAGTACGGCCCAGA+AGG | 0.579017 | 5.1:+14935249 | MS.gene86546:CDS |
| GAGCCCCGGTTAAAATGTGC+CGG | 0.579772 | 5.1:-14938311 | None:intergenic |
| GTTGAAACATCTCAGAAGTA+CGG | 0.583724 | 5.1:+14935240 | MS.gene86546:CDS |
| TCATTGATTATTCCAGACCA+AGG | 0.588363 | 5.1:-14939850 | None:intergenic |
| TCCTTGAGGCGGCGACAACA+TGG | 0.589447 | 5.1:-14939716 | None:intergenic |
| TCTTCTATACTATGTCTACC+TGG | 0.595004 | 5.1:-14937727 | None:intergenic |
| TGATATCTCTCATTGTCGGA+CGG | 0.595675 | 5.1:-14938512 | None:intergenic |
| ATTTGGAAAGCTTCTACTAG+AGG | 0.598028 | 5.1:+14938287 | MS.gene86546:CDS |
| TAAAGAGACATATCCGGTGA+AGG | 0.598715 | 5.1:-14939787 | None:intergenic |
| CAAACAAGGGAACAAATGGA+AGG | 0.600461 | 5.1:+14937221 | MS.gene86546:CDS |
| CAATCAATGGTAGAATCACA+TGG | 0.601271 | 5.1:+14938480 | MS.gene86546:CDS |
| ATGCACCAAGCCTTGTGGCA+AGG | 0.604863 | 5.1:+14937110 | MS.gene86546:CDS |
| TCTTGATACAGGAGCAGACA+AGG | 0.604956 | 5.1:-14938253 | None:intergenic |
| AGGATCGTTATCTTGAAACC+TGG | 0.605461 | 5.1:+14937649 | MS.gene86546:CDS |
| AAAGAATAAGTGAAAATATG+GGG | 0.610226 | 5.1:+14937188 | MS.gene86546:CDS |
| TTCAACAGTTCCTTTCCTTG+AGG | 0.611963 | 5.1:-14939730 | None:intergenic |
| TTGAAGCATATCAAGCAGCA+AGG | 0.612487 | 5.1:+14937416 | MS.gene86546:CDS |
| GCGATGATGATGGATGGAGC+CGG | 0.614284 | 5.1:+14937326 | MS.gene86546:CDS |
| TGAGCAGACTGAATTTGAGT+CGG | 0.615214 | 5.1:-14937926 | None:intergenic |
| TAGATGCATCTTCTCCAACC+AGG | 0.617998 | 5.1:+14937629 | MS.gene86546:CDS |
| CACATAATACAAGTATGCAA+AGG | 0.618748 | 5.1:+14937530 | MS.gene86546:CDS |
| ACCCCATCAACCTTGCCACA+AGG | 0.620275 | 5.1:-14937120 | None:intergenic |
| ATGACGGCGATGATGATGGA+TGG | 0.620775 | 5.1:+14937320 | MS.gene86546:CDS |
| CTGATGTCTCTGAAAACTTG+TGG | 0.622401 | 5.1:-14939094 | None:intergenic |
| TGCACCAATTCAGACTCAGA+CGG | 0.623432 | 5.1:-14939388 | None:intergenic |
| GAATAAGTCTTTGTTAAGAG+GGG | 0.627428 | 5.1:+14939480 | MS.gene86546:CDS |
| ACTTGATTCTAGTGATGTCG+AGG | 0.630630 | 5.1:+14939345 | MS.gene86546:CDS |
| ACAAGATCATACGAAGGTGA+AGG | 0.634923 | 5.1:+14937955 | MS.gene86546:CDS |
| TATCCAATCGATCAAGCACA+CGG | 0.640457 | 5.1:+14937083 | MS.gene86546:CDS |
| GAGCAGACAAGGATCTTACA+AGG | 0.642350 | 5.1:-14938242 | None:intergenic |
| TAACCGGGGCTCATATCCGG+AGG | 0.647535 | 5.1:+14938322 | MS.gene86546:CDS |
| TTGGAGACAACAACTCTCTG+TGG | 0.648215 | 5.1:-14938215 | None:intergenic |
| TCTTGTTGAAGAACTCACAA+AGG | 0.659944 | 5.1:+14939921 | MS.gene86546:CDS |
| GCAATATGCACCAAGCCTTG+TGG | 0.667401 | 5.1:+14937105 | MS.gene86546:CDS |
| ACAATGAGAGATATCACAAG+TGG | 0.667920 | 5.1:+14938519 | MS.gene86546:CDS |
| AATCTAGACAGTGTCAAAGG+TGG | 0.669822 | 5.1:-14939670 | None:intergenic |
| GGAAAAGGTTATGTGGTCCG+AGG | 0.675521 | 5.1:+14937805 | MS.gene86546:CDS |
| TATCCGGAGGAAGCTTGAAG+CGG | 0.676693 | 5.1:+14938335 | MS.gene86546:CDS |
| CGTTTGAAATGCGAACTGCA+AGG | 0.679951 | 5.1:+14937772 | MS.gene86546:CDS |
| GCTCACAAGAGACATCATAG+TGG | 0.683907 | 5.1:+14934947 | MS.gene86546:CDS |
| AATCTCTACTGATAAATTCG+GGG | 0.689534 | 5.1:-14937999 | None:intergenic |
| CACACAGATGCAGGACTCGG+AGG | 0.714130 | 5.1:-14938980 | None:intergenic |
| CCAACAGTTCTTATGAACGA+CGG | 0.720547 | 5.1:+14938543 | MS.gene86546:CDS |
| GAATCAACAAGATCATACGA+AGG | 0.725807 | 5.1:+14937949 | MS.gene86546:CDS |
| GTGAAGGATATAACGAAACA+CGG | 0.727910 | 5.1:-14939771 | None:intergenic |
| ACAGTTCTTATGAACGACGG+TGG | 0.731871 | 5.1:+14938546 | MS.gene86546:CDS |
| AGAATTGGACTAGTTCAACA+GGG | 0.749710 | 5.1:+14937698 | MS.gene86546:CDS |
| TCTTTAGGAGAACTACACTG+AGG | 0.805453 | 5.1:+14938955 | MS.gene86546:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTCAAAAAAAGTTAAA+TGG | - | chr5.1:14935704-14935723 | None:intergenic | 10.0% |
| !! | CAAATTATAATTATAAGAAA+AGG | + | chr5.1:14936250-14936269 | MS.gene86546:intron | 10.0% |
| !! | GATAAAATTAATTGATTATT+TGG | + | chr5.1:14936366-14936385 | MS.gene86546:intron | 10.0% |
| !! | TATTTCAAAAAAAGTTAAAT+GGG | - | chr5.1:14935703-14935722 | None:intergenic | 10.0% |
| !! | AAAAGAATAAGTGAAAATAT+GGG | + | chr5.1:14937187-14937206 | MS.gene86546:CDS | 15.0% |
| !! | AACAAGATAATAAAAAATCA+AGG | + | chr5.1:14938746-14938765 | MS.gene86546:intron | 15.0% |
| !! | ACAAGATAATAAAAAATCAA+GGG | + | chr5.1:14938747-14938766 | MS.gene86546:intron | 15.0% |
| !! | ATTTCAAAAAAAGTTAAATG+GGG | - | chr5.1:14935702-14935721 | None:intergenic | 15.0% |
| !! | TAAAAGAATAAGTGAAAATA+TGG | + | chr5.1:14937186-14937205 | MS.gene86546:CDS | 15.0% |
| !! | TAACAAATAACAAACAAATA+AGG | + | chr5.1:14936207-14936226 | MS.gene86546:intron | 15.0% |
| !! | TCTTAACTTTATATTTATTG+TGG | + | chr5.1:14938707-14938726 | MS.gene86546:intron | 15.0% |
| !! | AAAGAATAAGTGAAAATATG+GGG | + | chr5.1:14937188-14937207 | MS.gene86546:CDS | 20.0% |
| !! | AACTTTATATTTATTGTGGA+GGG | + | chr5.1:14938711-14938730 | MS.gene86546:intron | 20.0% |
| !! | AAGACAATCAATTAAGTTAA+GGG | - | chr5.1:14935919-14935938 | None:intergenic | 20.0% |
| !! | AATTGGTACAAATTATAGTT+AGG | - | chr5.1:14935952-14935971 | None:intergenic | 20.0% |
| !! | ACTAAATTCAATTCAACAAT+TGG | - | chr5.1:14936961-14936980 | None:intergenic | 20.0% |
| !! | AGAGACTAATGAAAAATTAA+AGG | + | chr5.1:14936336-14936355 | MS.gene86546:intron | 20.0% |
| !! | ATTGGTACAAATTATAGTTA+GGG | - | chr5.1:14935951-14935970 | None:intergenic | 20.0% |
| !! | CATAATAAAACAACATTAAC+CGG | - | chr5.1:14939198-14939217 | None:intergenic | 20.0% |
| !! | CATATTGAACATAATTACAA+TGG | - | chr5.1:14936725-14936744 | None:intergenic | 20.0% |
| !! | CTTAATTGATTGTCTTAATT+TGG | + | chr5.1:14935923-14935942 | MS.gene86546:intron | 20.0% |
| !! | GAGACTAATGAAAAATTAAA+GGG | + | chr5.1:14936337-14936356 | MS.gene86546:intron | 20.0% |
| !! | GTTATAAGATTTGATCATTA+AGG | - | chr5.1:14937605-14937624 | None:intergenic | 20.0% |
| !! | TAAAAAAAACGTTAACAGAA+AGG | - | chr5.1:14936093-14936112 | None:intergenic | 20.0% |
| !! | TAACTTTATATTTATTGTGG+AGG | + | chr5.1:14938710-14938729 | MS.gene86546:intron | 20.0% |
| !! | TAAGACAATCAATTAAGTTA+AGG | - | chr5.1:14935920-14935939 | None:intergenic | 20.0% |
| !! | TATCAACACAAGTTTAATAT+CGG | + | chr5.1:14936147-14936166 | MS.gene86546:intron | 20.0% |
| !!! | AACTATAATTTGTACCAATT+TGG | + | chr5.1:14935952-14935971 | MS.gene86546:intron | 20.0% |
| !!! | GAAATATGATAGTATTTTTC+TGG | - | chr5.1:14936669-14936688 | None:intergenic | 20.0% |
| !!! | TCTTTATTCACTTGATAATT+TGG | + | chr5.1:14939804-14939823 | MS.gene86546:CDS | 20.0% |
| ! | AAAGTGAAAAAATATCAGCA+AGG | + | chr5.1:14935817-14935836 | MS.gene86546:intron | 25.0% |
| ! | AATTTATCAGTAGAGATTCA+AGG | + | chr5.1:14938004-14938023 | MS.gene86546:CDS | 25.0% |
| ! | AGTTTGAAAAGATATTCACT+CGG | - | chr5.1:14939267-14939286 | None:intergenic | 25.0% |
| ! | ATCATCTCTCTATATAAGTA+AGG | + | chr5.1:14935751-14935770 | MS.gene86546:intron | 25.0% |
| ! | ATCTTAAAACCGCAATAAAA+AGG | + | chr5.1:14938837-14938856 | MS.gene86546:intron | 25.0% |
| ! | ATGAAATATAAAGGTCATCA+TGG | - | chr5.1:14938894-14938913 | None:intergenic | 25.0% |
| ! | CAACATCATATTAAATCAAG+TGG | + | chr5.1:14936571-14936590 | MS.gene86546:intron | 25.0% |
| ! | CAACTCTGAATGAAATATAA+AGG | - | chr5.1:14938903-14938922 | None:intergenic | 25.0% |
| ! | CAATGAAGAGATCAATATAT+TGG | + | chr5.1:14939867-14939886 | MS.gene86546:CDS | 25.0% |
| ! | CTAATGAAAAATTAAAGGGA+AGG | + | chr5.1:14936341-14936360 | MS.gene86546:intron | 25.0% |
| ! | GAAATGAATCGAATTCAATA+TGG | - | chr5.1:14937288-14937307 | None:intergenic | 25.0% |
| ! | GAATGATGAAAATTCTATGA+AGG | + | chr5.1:14939573-14939592 | MS.gene86546:CDS | 25.0% |
| ! | TAAAAACAATCAAGCAAAAG+AGG | - | chr5.1:14935147-14935166 | None:intergenic | 25.0% |
| ! | TATTCAATCATGAAGAGAAT+TGG | + | chr5.1:14937683-14937702 | MS.gene86546:CDS | 25.0% |
| ! | TATTTCAGTATACATAGGAT+AGG | + | chr5.1:14936425-14936444 | MS.gene86546:intron | 25.0% |
| ! | TCAAAAACAGAATTTCCAAT+AGG | - | chr5.1:14939520-14939539 | None:intergenic | 25.0% |
| ! | TGAATCTCTACTGATAAATT+CGG | - | chr5.1:14938004-14938023 | None:intergenic | 25.0% |
| ! | TTGGTACAAATTATAGTTAG+GGG | - | chr5.1:14935950-14935969 | None:intergenic | 25.0% |
| ! | TTTCACAAAGTTAAAGATGA+CGG | + | chr5.1:14937304-14937323 | MS.gene86546:CDS | 25.0% |
| !! | CTTTTCTTGAATCAAAACTA+TGG | - | chr5.1:14939175-14939194 | None:intergenic | 25.0% |
| !! | GATTTATTTGCTTGTTGATT+TGG | + | chr5.1:14939297-14939316 | MS.gene86546:intron | 25.0% |
| !! | TAGTATAGAAGATTTTCTTG+AGG | + | chr5.1:14937738-14937757 | MS.gene86546:CDS | 25.0% |
| !! | TCACTTATTCTTTTATCTGA+TGG | - | chr5.1:14937181-14937200 | None:intergenic | 25.0% |
| !!! | AAATTCTGTTTTTGAAGAAG+TGG | + | chr5.1:14939525-14939544 | MS.gene86546:CDS | 25.0% |
| !!! | TGTTGATAGTGATAACTTTA+TGG | - | chr5.1:14936135-14936154 | None:intergenic | 25.0% |
| !!! | TTATTTGGTTTGATGAAACA+AGG | + | chr5.1:14936381-14936400 | MS.gene86546:intron | 25.0% |
| AAATACAAACAGGATCTTTC+AGG | + | chr5.1:14938166-14938185 | MS.gene86546:CDS | 30.0% | |
| AAGTGACTAAAGATAAACTG+TGG | - | chr5.1:14935411-14935430 | None:intergenic | 30.0% | |
| AATAATCGTTATTCAAACGC+TGG | + | chr5.1:14937031-14937050 | MS.gene86546:CDS | 30.0% | |
| AATCTCTACTGATAAATTCG+GGG | - | chr5.1:14938002-14938021 | None:intergenic | 30.0% | |
| ACAAATCAAGCAAAATCTTG+TGG | - | chr5.1:14939621-14939640 | None:intergenic | 30.0% | |
| ACATATGAAGAGAAACTTAC+CGG | - | chr5.1:14936532-14936551 | None:intergenic | 30.0% | |
| ACTTAAAAGATCACCAATAG+AGG | + | chr5.1:14936280-14936299 | MS.gene86546:intron | 30.0% | |
| AGCAAAACTGTATCTCAAAT+TGG | - | chr5.1:14938430-14938449 | None:intergenic | 30.0% | |
| AGTAACAAAGCAAAACATAG+AGG | - | chr5.1:14935979-14935998 | None:intergenic | 30.0% | |
| AGTGAATAAAGAGACATATC+CGG | - | chr5.1:14939796-14939815 | None:intergenic | 30.0% | |
| ATAAACCATAGTTCTTGTTC+TGG | + | chr5.1:14936918-14936937 | MS.gene86546:intron | 30.0% | |
| ATGCATATCTTGCTGAAATT+TGG | + | chr5.1:14935055-14935074 | MS.gene86546:intron | 30.0% | |
| ATTATCAAGTAGAAGAAGAC+TGG | + | chr5.1:14937002-14937021 | MS.gene86546:CDS | 30.0% | |
| ATTTGACGAGCAATAAGTTT+AGG | - | chr5.1:14937871-14937890 | None:intergenic | 30.0% | |
| CAAACGCTAACAATAAAGTT+AGG | + | chr5.1:14935875-14935894 | MS.gene86546:intron | 30.0% | |
| CAAGAACTATGGTTTATCTT+TGG | - | chr5.1:14936915-14936934 | None:intergenic | 30.0% | |
| CACATAATACAAGTATGCAA+AGG | + | chr5.1:14937530-14937549 | MS.gene86546:CDS | 30.0% | |
| CGTTAACTTATCTACCAATT+TGG | + | chr5.1:14936035-14936054 | MS.gene86546:intron | 30.0% | |
| GAAGAAACAGAAATACAAAC+AGG | + | chr5.1:14938156-14938175 | MS.gene86546:CDS | 30.0% | |
| GAATAAGTCTTTGTTAAGAG+GGG | + | chr5.1:14939480-14939499 | MS.gene86546:CDS | 30.0% | |
| GAATCTCTACTGATAAATTC+GGG | - | chr5.1:14938003-14938022 | None:intergenic | 30.0% | |
| GATCAATATATTGGAAAGAG+AGG | + | chr5.1:14939876-14939895 | MS.gene86546:CDS | 30.0% | |
| GGAATAAGTCTTTGTTAAGA+GGG | + | chr5.1:14939479-14939498 | MS.gene86546:CDS | 30.0% | |
| GGGAAGAGAGAAAAAAATTA+CGG | - | chr5.1:14935121-14935140 | None:intergenic | 30.0% | |
| GTCTTTCTCAAGATTCTAAA+AGG | - | chr5.1:14936750-14936769 | None:intergenic | 30.0% | |
| TAATACCAGAACAAGAACTA+TGG | - | chr5.1:14936926-14936945 | None:intergenic | 30.0% | |
| TCATGATTGAATATGCAATC+AGG | - | chr5.1:14937676-14937695 | None:intergenic | 30.0% | |
| TGCATATCTTGCTGAAATTT+GGG | + | chr5.1:14935056-14935075 | MS.gene86546:intron | 30.0% | |
| TGGAATAAGTCTTTGTTAAG+AGG | + | chr5.1:14939478-14939497 | MS.gene86546:CDS | 30.0% | |
| TGGTAAGAGAAATCAATCAA+TGG | + | chr5.1:14938467-14938486 | MS.gene86546:CDS | 30.0% | |
| TTAACAGAAAGGACTAAAAC+TGG | - | chr5.1:14936082-14936101 | None:intergenic | 30.0% | |
| TTAATCCCTGAATAGGAAAT+GGG | + | chr5.1:14935430-14935449 | MS.gene86546:intron | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | - | chr5.1:14935469-14935488 | None:intergenic | 30.0% | |
| TTTAATCCCTGAATAGGAAA+TGG | + | chr5.1:14935429-14935448 | MS.gene86546:intron | 30.0% | |
| TTTGCAATTTATCTGCATTC+AGG | - | chr5.1:14935470-14935489 | None:intergenic | 30.0% | |
| ! | ATTTCCCAAAAATTTTGTGC+AGG | + | chr5.1:14936468-14936487 | MS.gene86546:intron | 30.0% |
| ! | GACTACTATTTTCTCATTCA+GGG | + | chr5.1:14935660-14935679 | MS.gene86546:intron | 30.0% |
| ! | TAGGGTATTTCAGTATACAT+AGG | + | chr5.1:14936420-14936439 | MS.gene86546:intron | 30.0% |
| ! | TATAGAAGATTTTCTTGAGG+AGG | + | chr5.1:14937741-14937760 | MS.gene86546:CDS | 30.0% |
| ! | TGACTACTATTTTCTCATTC+AGG | + | chr5.1:14935659-14935678 | MS.gene86546:intron | 30.0% |
| ! | TGGTAACGAAACAAAACATA+GGG | - | chr5.1:14936062-14936081 | None:intergenic | 30.0% |
| ! | TTTGAAATGTGCAGATGAAT+GGG | + | chr5.1:14938122-14938141 | MS.gene86546:CDS | 30.0% |
| ! | TTTTCAAACAAGGGAACAAA+TGG | + | chr5.1:14937217-14937236 | MS.gene86546:CDS | 30.0% |
| ! | TTTTCTGCTATATGCTCTTT+AGG | + | chr5.1:14938940-14938959 | MS.gene86546:intron | 30.0% |
| !! | AGCGTTTGATAGTGTTTATT+TGG | - | chr5.1:14935863-14935882 | None:intergenic | 30.0% |
| !! | GCGTTTGATAGTGTTTATTT+GGG | - | chr5.1:14935862-14935881 | None:intergenic | 30.0% |
| !! | TCTATTGGTGATCTTTTAAG+TGG | - | chr5.1:14936281-14936300 | None:intergenic | 30.0% |
| !!! | AGTTTTGATTCAAGAAAAGC+CGG | + | chr5.1:14939176-14939195 | MS.gene86546:intron | 30.0% |
| !!! | TTTTGAAATGTGCAGATGAA+TGG | + | chr5.1:14938121-14938140 | MS.gene86546:CDS | 30.0% |
| ACAAAACATAGGGACCAAAT+TGG | - | chr5.1:14936052-14936071 | None:intergenic | 35.0% | |
| ACAATCAAGCAAAAGAGGAA+AGG | - | chr5.1:14935142-14935161 | None:intergenic | 35.0% | |
| ACAATGAGAGATATCACAAG+TGG | + | chr5.1:14938519-14938538 | MS.gene86546:CDS | 35.0% | |
| ACACAAGTTTAATATCGGCA+AGG | + | chr5.1:14936152-14936171 | MS.gene86546:intron | 35.0% | |
| ACTAACAGAGTCTACATTCA+GGG | - | chr5.1:14935497-14935516 | None:intergenic | 35.0% | |
| AGCCAGAAAAATTGGATAGT+GGG | + | chr5.1:14935296-14935315 | MS.gene86546:intron | 35.0% | |
| AGGAACTGTTGAAGTTAGTA+TGG | + | chr5.1:14939740-14939759 | MS.gene86546:CDS | 35.0% | |
| AGGAATGAAGAGAAGAATGA+AGG | + | chr5.1:14936300-14936319 | MS.gene86546:intron | 35.0% | |
| ATTGTGGAGGGATAAATAGA+TGG | + | chr5.1:14938723-14938742 | MS.gene86546:intron | 35.0% | |
| ATTTGGAAAGCTTCTACTAG+AGG | + | chr5.1:14938287-14938306 | MS.gene86546:CDS | 35.0% | |
| CAAAACATAGAGGACCAAAT+TGG | - | chr5.1:14935969-14935988 | None:intergenic | 35.0% | |
| CAATCAAGCAAAAGAGGAAA+GGG | - | chr5.1:14935141-14935160 | None:intergenic | 35.0% | |
| CAATCAATGGTAGAATCACA+TGG | + | chr5.1:14938480-14938499 | MS.gene86546:CDS | 35.0% | |
| CCGCAATAAAAAGGAATGAA+CGG | + | chr5.1:14938846-14938865 | MS.gene86546:intron | 35.0% | |
| CTCTATAAATGACGGTTTCA+TGG | + | chr5.1:14936845-14936864 | MS.gene86546:intron | 35.0% | |
| CTTGTGATATCTCTCATTGT+CGG | - | chr5.1:14938519-14938538 | None:intergenic | 35.0% | |
| GAAACCGTCATTTATAGAGA+TGG | - | chr5.1:14936844-14936863 | None:intergenic | 35.0% | |
| GAATCAACAAGATCATACGA+AGG | + | chr5.1:14937949-14937968 | MS.gene86546:CDS | 35.0% | |
| GAATCACTTTCAGTTGTTCT+TGG | + | chr5.1:14939646-14939665 | MS.gene86546:CDS | 35.0% | |
| GATACATATGCAAAGCCTAT+TGG | + | chr5.1:14939502-14939521 | MS.gene86546:CDS | 35.0% | |
| GGAACTGTTGAAGTTAGTAT+GGG | + | chr5.1:14939741-14939760 | MS.gene86546:CDS | 35.0% | |
| GGAATGAAGAGAAGAATGAA+GGG | + | chr5.1:14936301-14936320 | MS.gene86546:intron | 35.0% | |
| GGTTGAAAAGGAATGAGTAA+TGG | - | chr5.1:14938602-14938621 | None:intergenic | 35.0% | |
| GTCACCATCTCTATAAATGA+CGG | + | chr5.1:14936837-14936856 | MS.gene86546:intron | 35.0% | |
| GTGAAGGATATAACGAAACA+CGG | - | chr5.1:14939774-14939793 | None:intergenic | 35.0% | |
| GTTAGGCTTATTCAATCACT+CGG | + | chr5.1:14935892-14935911 | MS.gene86546:intron | 35.0% | |
| GTTGAAACATCTCAGAAGTA+CGG | + | chr5.1:14935240-14935259 | MS.gene86546:CDS | 35.0% | |
| TCAAGATCAGGAACATCATT+TGG | + | chr5.1:14938270-14938289 | MS.gene86546:CDS | 35.0% | |
| TCTCTTATGTAAGATTCTGC+TGG | - | chr5.1:14939424-14939443 | None:intergenic | 35.0% | |
| TCTTCTATACTATGTCTACC+TGG | - | chr5.1:14937730-14937749 | None:intergenic | 35.0% | |
| TCTTCTCTTCATTCCTCTAT+TGG | - | chr5.1:14936296-14936315 | None:intergenic | 35.0% | |
| TCTTGTTGAAGAACTCACAA+AGG | + | chr5.1:14939921-14939940 | MS.gene86546:CDS | 35.0% | |
| TGAAAAGGAATGAGTAATGG+AGG | - | chr5.1:14938599-14938618 | None:intergenic | 35.0% | |
| TGGTTAATGAGCTTCAGTTA+AGG | + | chr5.1:14936591-14936610 | MS.gene86546:intron | 35.0% | |
| TGTTCAAAGTTTGCCGAAAT+CGG | + | chr5.1:14937448-14937467 | MS.gene86546:CDS | 35.0% | |
| TGTTTCGTTATATCCTTCAC+CGG | + | chr5.1:14939774-14939793 | MS.gene86546:CDS | 35.0% | |
| TTCACTCATGTTATGATGAG+AGG | + | chr5.1:14935011-14935030 | MS.gene86546:intron | 35.0% | |
| TTCAGGGACTAAATTGACTA+AGG | - | chr5.1:14935544-14935563 | None:intergenic | 35.0% | |
| TTTGATGAAACAAGGAGGAA+GGG | + | chr5.1:14936389-14936408 | MS.gene86546:intron | 35.0% | |
| ! | AACATTTGAGTTCAATCCCT+TGG | + | chr5.1:14939833-14939852 | MS.gene86546:CDS | 35.0% |
| ! | AGACTCTGTTGGTAAATTTC+AGG | - | chr5.1:14935593-14935612 | None:intergenic | 35.0% |
| ! | AGAGATTTACTTGTTGCTTC+TGG | + | chr5.1:14939439-14939458 | MS.gene86546:CDS | 35.0% |
| ! | AGTCACTTTAATCCCTGAAT+AGG | + | chr5.1:14935423-14935442 | MS.gene86546:intron | 35.0% |
| ! | CATTGATTATTCCAGACCAA+GGG | - | chr5.1:14939852-14939871 | None:intergenic | 35.0% |
| ! | CCGTTCATTCCTTTTTATTG+CGG | - | chr5.1:14938849-14938868 | None:intergenic | 35.0% |
| ! | CTGGTAACGAAACAAAACAT+AGG | - | chr5.1:14936063-14936082 | None:intergenic | 35.0% |
| ! | GAAAAGGAATGAGTAATGGA+GGG | - | chr5.1:14938598-14938617 | None:intergenic | 35.0% |
| ! | GACTCTGTTGGTAAATTTCA+GGG | - | chr5.1:14935592-14935611 | None:intergenic | 35.0% |
| ! | GCAATAAGTTTAGGATCAGA+TGG | - | chr5.1:14937862-14937881 | None:intergenic | 35.0% |
| ! | GGGAAGAAGTTTTCAAACAA+GGG | + | chr5.1:14937208-14937227 | MS.gene86546:CDS | 35.0% |
| ! | TCATTGATTATTCCAGACCA+AGG | - | chr5.1:14939853-14939872 | None:intergenic | 35.0% |
| !! | AGAATTGGACTAGTTCAACA+GGG | + | chr5.1:14937698-14937717 | MS.gene86546:CDS | 35.0% |
| !! | AGATACAGTTTTGCTCTAAG+AGG | + | chr5.1:14938435-14938454 | MS.gene86546:CDS | 35.0% |
| !! | CTGGTTTATACTTTGGTTCT+TGG | + | chr5.1:14939458-14939477 | MS.gene86546:CDS | 35.0% |
| !! | GTTGCTTCTGGTTTATACTT+TGG | + | chr5.1:14939451-14939470 | MS.gene86546:CDS | 35.0% |
| !! | TTTGGTTTGATGAAACAAGG+AGG | + | chr5.1:14936384-14936403 | MS.gene86546:intron | 35.0% |
| !!! | GATACAGTTTTGCTCTAAGA+GGG | + | chr5.1:14938436-14938455 | MS.gene86546:CDS | 35.0% |
| AACTGTCGGAAAAGGTTATG+TGG | + | chr5.1:14937798-14937817 | MS.gene86546:CDS | 40.0% | |
| AAGGATCTTACAAGGTTCCT+TGG | - | chr5.1:14938237-14938256 | None:intergenic | 40.0% | |
| AATCTAGACAGTGTCAAAGG+TGG | - | chr5.1:14939673-14939692 | None:intergenic | 40.0% | |
| ACAAGATCATACGAAGGTGA+AGG | + | chr5.1:14937955-14937974 | MS.gene86546:CDS | 40.0% | |
| ACCAACAGAGTCTACTTTCA+GGG | + | chr5.1:14935600-14935619 | MS.gene86546:intron | 40.0% | |
| ACGAACAAGGGGATATAAGA+AGG | - | chr5.1:14936691-14936710 | None:intergenic | 40.0% | |
| ACTAACGGGGTCTATATTCA+GGG | - | chr5.1:14935560-14935579 | None:intergenic | 40.0% | |
| ACTTGATTCTAGTGATGTCG+AGG | + | chr5.1:14939345-14939364 | MS.gene86546:CDS | 40.0% | |
| AGAGAATCTGAACAGCGAAA+AGG | + | chr5.1:14937498-14937517 | MS.gene86546:CDS | 40.0% | |
| AGGATCGTTATCTTGAAACC+TGG | + | chr5.1:14937649-14937668 | MS.gene86546:CDS | 40.0% | |
| AGGTTTCAAGATAACGATCC+TGG | - | chr5.1:14937650-14937669 | None:intergenic | 40.0% | |
| ATATCAAGCAGCAAGGTTTC+AGG | + | chr5.1:14937423-14937442 | MS.gene86546:CDS | 40.0% | |
| ATGGAAGGAGTTCAGTTAGT+TGG | + | chr5.1:14937236-14937255 | MS.gene86546:CDS | 40.0% | |
| CAAACAAGGGAACAAATGGA+AGG | + | chr5.1:14937221-14937240 | MS.gene86546:CDS | 40.0% | |
| CAAGGAAAAACTGTCGGAAA+AGG | + | chr5.1:14937790-14937809 | MS.gene86546:CDS | 40.0% | |
| CCAACAGTTCTTATGAACGA+CGG | + | chr5.1:14938543-14938562 | MS.gene86546:CDS | 40.0% | |
| CTGAATCTAGACAGTGTCAA+AGG | - | chr5.1:14939676-14939695 | None:intergenic | 40.0% | |
| CTTAGAGTTCTGCTCTTTGA+AGG | - | chr5.1:14937565-14937584 | None:intergenic | 40.0% | |
| GAACTGCAAGGAAAAACTGT+CGG | + | chr5.1:14937784-14937803 | MS.gene86546:CDS | 40.0% | |
| GAATTCTTCTGCAGAAGTGA+GGG | - | chr5.1:14938623-14938642 | None:intergenic | 40.0% | |
| GACTAACAGAGTCTACATTC+AGG | - | chr5.1:14935498-14935517 | None:intergenic | 40.0% | |
| GAGCCAGAAAAATTGGATAG+TGG | + | chr5.1:14935295-14935314 | MS.gene86546:intron | 40.0% | |
| GATGTTCCTGATCTTGATAC+AGG | - | chr5.1:14938267-14938286 | None:intergenic | 40.0% | |
| GCCAGAAAAATTGGATAGTG+GGG | + | chr5.1:14935297-14935316 | MS.gene86546:intron | 40.0% | |
| GCCTTTGTTCTCCAAAATTC+CGG | - | chr5.1:14937348-14937367 | None:intergenic | 40.0% | |
| GCTAGAAACACTTCCGATTT+CGG | - | chr5.1:14937464-14937483 | None:intergenic | 40.0% | |
| GGTCAATGATTGTTTCAGCT+AGG | - | chr5.1:14936648-14936667 | None:intergenic | 40.0% | |
| GTCATTGTTACCACGAACAA+GGG | - | chr5.1:14936703-14936722 | None:intergenic | 40.0% | |
| GTGACAACCGAGGAAAATAA+GGG | - | chr5.1:14935088-14935107 | None:intergenic | 40.0% | |
| GTGTCTCAATATCACTTCCT+CGG | - | chr5.1:14937825-14937844 | None:intergenic | 40.0% | |
| GTTTGATGAAACAAGGAGGA+AGG | + | chr5.1:14936388-14936407 | MS.gene86546:intron | 40.0% | |
| TAAAGAGACATATCCGGTGA+AGG | - | chr5.1:14939790-14939809 | None:intergenic | 40.0% | |
| TACCAACAGAGTCTACTTTC+AGG | + | chr5.1:14935599-14935618 | MS.gene86546:intron | 40.0% | |
| TATCCAATCGATCAAGCACA+CGG | + | chr5.1:14937083-14937102 | MS.gene86546:CDS | 40.0% | |
| TATGATGTCTCTTGTGAGCA+TGG | - | chr5.1:14934946-14934965 | None:intergenic | 40.0% | |
| TCAGGGACTAAAGTGACTAA+CGG | - | chr5.1:14935575-14935594 | None:intergenic | 40.0% | |
| TCATTGTTACCACGAACAAG+GGG | - | chr5.1:14936702-14936721 | None:intergenic | 40.0% | |
| TGACAACCGAGGAAAATAAG+GGG | - | chr5.1:14935087-14935106 | None:intergenic | 40.0% | |
| TGAGCAGACTGAATTTGAGT+CGG | - | chr5.1:14937929-14937948 | None:intergenic | 40.0% | |
| TGATATCTCTCATTGTCGGA+CGG | - | chr5.1:14938515-14938534 | None:intergenic | 40.0% | |
| TGGAAGGAGTTCAGTTAGTT+GGG | + | chr5.1:14937237-14937256 | MS.gene86546:CDS | 40.0% | |
| TGTGACAACCGAGGAAAATA+AGG | - | chr5.1:14935089-14935108 | None:intergenic | 40.0% | |
| TTACCGGTAATTCTCCTTCT+GGG | - | chr5.1:14935266-14935285 | None:intergenic | 40.0% | |
| TTCAACAGTTCCTTTCCTTG+AGG | - | chr5.1:14939733-14939752 | None:intergenic | 40.0% | |
| TTCAAGATAACGATCCTGGT+TGG | - | chr5.1:14937646-14937665 | None:intergenic | 40.0% | |
| TTCTTATATCCCCTTGTTCG+TGG | + | chr5.1:14936690-14936709 | MS.gene86546:intron | 40.0% | |
| TTGAAGCATATCAAGCAGCA+AGG | + | chr5.1:14937416-14937435 | MS.gene86546:CDS | 40.0% | |
| TTGAATATGCAATCAGGACC+AGG | - | chr5.1:14937670-14937689 | None:intergenic | 40.0% | |
| ! | CCAGAAAAATTGGATAGTGG+GGG | + | chr5.1:14935298-14935317 | MS.gene86546:intron | 40.0% |
| ! | CCTGCCTGCACAAAATTTTT+GGG | - | chr5.1:14936475-14936494 | None:intergenic | 40.0% |
| ! | CTGATGTCTCTGAAAACTTG+TGG | - | chr5.1:14939097-14939116 | None:intergenic | 40.0% |
| ! | CTTTTATCTGATGGAGCAAC+AGG | - | chr5.1:14937172-14937191 | None:intergenic | 40.0% |
| ! | GCAGTGTTCATGAAGACTTT+TGG | + | chr5.1:14939005-14939024 | MS.gene86546:CDS | 40.0% |
| ! | GGGGAAGAAGTTTTCAAACA+AGG | + | chr5.1:14937207-14937226 | MS.gene86546:CDS | 40.0% |
| ! | GTGTTCATGAAGACTTTTGG+AGG | + | chr5.1:14939008-14939027 | MS.gene86546:CDS | 40.0% |
| ! | TCCTGCCTGCACAAAATTTT+TGG | - | chr5.1:14936476-14936495 | None:intergenic | 40.0% |
| ! | TCTTTAGGAGAACTACACTG+AGG | + | chr5.1:14938955-14938974 | MS.gene86546:intron | 40.0% |
| !! | ATTTTGGAGAACAAAGGCGT+CGG | + | chr5.1:14937350-14937369 | MS.gene86546:CDS | 40.0% |
| !! | GACAAATCAGGAGTTGATAC+TGG | - | chr5.1:14939052-14939071 | None:intergenic | 40.0% |
| !! | GAGAATTGGACTAGTTCAAC+AGG | + | chr5.1:14937697-14937716 | MS.gene86546:CDS | 40.0% |
| !! | TTGTTGATTTGGCAGAGCTA+AGG | + | chr5.1:14939308-14939327 | MS.gene86546:intron | 40.0% |
| !!! | GTTTTCCCCCTTATTTTCCT+CGG | + | chr5.1:14935078-14935097 | MS.gene86546:intron | 40.0% |
| !!! | TTCTGAAGTTCCTTTTCCTG+TGG | - | chr5.1:14937382-14937401 | None:intergenic | 40.0% |
| AACAGTTCCTTTCCTTGAGG+CGG | - | chr5.1:14939730-14939749 | None:intergenic | 45.0% | |
| ACAGAGAGTTGTTGTCTCCA+AGG | + | chr5.1:14938217-14938236 | MS.gene86546:CDS | 45.0% | |
| ACAGTTCTTATGAACGACGG+TGG | + | chr5.1:14938546-14938565 | MS.gene86546:CDS | 45.0% | |
| AGGGACTAAAGTGACTAACG+GGG | - | chr5.1:14935573-14935592 | None:intergenic | 45.0% | |
| AGTTCAACAGGGACTTTACC+AGG | + | chr5.1:14937709-14937728 | MS.gene86546:CDS | 45.0% | |
| ATCTTGAGAAAGACCCCTCA+AGG | + | chr5.1:14936756-14936775 | MS.gene86546:intron | 45.0% | |
| ATGAAGAGAAACTTACCGGC+AGG | - | chr5.1:14936528-14936547 | None:intergenic | 45.0% | |
| ATTCAGACTCAGACGGTTTC+TGG | - | chr5.1:14939384-14939403 | None:intergenic | 45.0% | |
| CAGGGACTAAAGTGACTAAC+GGG | - | chr5.1:14935574-14935593 | None:intergenic | 45.0% | |
| CCGTCGTTCATAAGAACTGT+TGG | - | chr5.1:14938546-14938565 | None:intergenic | 45.0% | |
| CGAATTCTTCTGCAGAAGTG+AGG | - | chr5.1:14938624-14938643 | None:intergenic | 45.0% | |
| CTACTCTCCTACAACCTTGA+GGG | - | chr5.1:14936773-14936792 | None:intergenic | 45.0% | |
| CTGATAAATTCGGGGACACT+TGG | - | chr5.1:14937994-14938013 | None:intergenic | 45.0% | |
| CTTACCGGTAATTCTCCTTC+TGG | - | chr5.1:14935267-14935286 | None:intergenic | 45.0% | |
| CTTGTGAGCATGGACTTTCT+TGG | - | chr5.1:14934936-14934955 | None:intergenic | 45.0% | |
| GAAACCGTCTGAGTCTGAAT+TGG | + | chr5.1:14939384-14939403 | MS.gene86546:CDS | 45.0% | |
| GAAAGCTTCTACTAGAGGAC+CGG | + | chr5.1:14938292-14938311 | MS.gene86546:CDS | 45.0% | |
| GAATTACCGGTAAGCAGTAG+CGG | + | chr5.1:14935273-14935292 | MS.gene86546:intron | 45.0% | |
| GACAACCGAGGAAAATAAGG+GGG | - | chr5.1:14935086-14935105 | None:intergenic | 45.0% | |
| GACGACCCATTTCCTATTCA+GGG | - | chr5.1:14935438-14935457 | None:intergenic | 45.0% | |
| GACTAACGGGGTCTATATTC+AGG | - | chr5.1:14935561-14935580 | None:intergenic | 45.0% | |
| GACTAAGGAGTCTGCATTCA+GGG | - | chr5.1:14935529-14935548 | None:intergenic | 45.0% | |
| GAGCAGACAAGGATCTTACA+AGG | - | chr5.1:14938245-14938264 | None:intergenic | 45.0% | |
| GCAACAGGTTTAGTGTCTAC+AGG | - | chr5.1:14937157-14937176 | None:intergenic | 45.0% | |
| GCTCACAAGAGACATCATAG+TGG | + | chr5.1:14934947-14934966 | MS.gene86546:CDS | 45.0% | |
| GGAGAGTAGAGCACATGTAT+AGG | + | chr5.1:14936784-14936803 | MS.gene86546:intron | 45.0% | |
| GGTCATTGTTACCACGAACA+AGG | - | chr5.1:14936704-14936723 | None:intergenic | 45.0% | |
| GTAGAGCACATGTATAGGCT+TGG | + | chr5.1:14936789-14936808 | MS.gene86546:intron | 45.0% | |
| TACTCTCCTACAACCTTGAG+GGG | - | chr5.1:14936772-14936791 | None:intergenic | 45.0% | |
| TAGATGCATCTTCTCCAACC+AGG | + | chr5.1:14937629-14937648 | MS.gene86546:CDS | 45.0% | |
| TCAAGAACATGTGACAACCG+AGG | - | chr5.1:14935098-14935117 | None:intergenic | 45.0% | |
| TCCCTGAAAGTAGACTCTGT+TGG | - | chr5.1:14935604-14935623 | None:intergenic | 45.0% | |
| TCGTCTCTTGAGGACAAATC+AGG | - | chr5.1:14939064-14939083 | None:intergenic | 45.0% | |
| TCTACTCTCCTACAACCTTG+AGG | - | chr5.1:14936774-14936793 | None:intergenic | 45.0% | |
| TCTGCTCCTGTATCAAGATC+AGG | + | chr5.1:14938258-14938277 | MS.gene86546:CDS | 45.0% | |
| TCTTGATACAGGAGCAGACA+AGG | - | chr5.1:14938256-14938275 | None:intergenic | 45.0% | |
| TGAAGAGAAACTTACCGGCA+GGG | - | chr5.1:14936527-14936546 | None:intergenic | 45.0% | |
| TGACTAAGGAGTCTGCATTC+AGG | - | chr5.1:14935530-14935549 | None:intergenic | 45.0% | |
| TGCACCAATTCAGACTCAGA+CGG | - | chr5.1:14939391-14939410 | None:intergenic | 45.0% | |
| TGCAGAAGTGAGGGTTGAAA+AGG | - | chr5.1:14938614-14938633 | None:intergenic | 45.0% | |
| TTGAGTTCAATCCCTTGGTC+TGG | + | chr5.1:14939838-14939857 | MS.gene86546:CDS | 45.0% | |
| TTGGAGACAACAACTCTCTG+TGG | - | chr5.1:14938218-14938237 | None:intergenic | 45.0% | |
| ! | AAAGATGACGGCGATGATGA+TGG | + | chr5.1:14937316-14937335 | MS.gene86546:CDS | 45.0% |
| ! | AGTAGCGGAGCCAGAAAAAT+TGG | + | chr5.1:14935288-14935307 | MS.gene86546:intron | 45.0% |
| ! | CACATGTATAGGCTTGGTCT+TGG | + | chr5.1:14936795-14936814 | MS.gene86546:intron | 45.0% |
| ! | CCCAAAAATTTTGTGCAGGC+AGG | + | chr5.1:14936472-14936491 | MS.gene86546:intron | 45.0% |
| ! | CCCCCACTATCCAATTTTTC+TGG | - | chr5.1:14935301-14935320 | None:intergenic | 45.0% |
| ! | CGTTTGAAATGCGAACTGCA+AGG | + | chr5.1:14937772-14937791 | MS.gene86546:CDS | 45.0% |
| ! | GACATCAGCTCTGGTTTAAC+TGG | + | chr5.1:14939109-14939128 | MS.gene86546:CDS | 45.0% |
| ! | GTTTTCAGAGACATCAGCTC+TGG | + | chr5.1:14939100-14939119 | MS.gene86546:CDS | 45.0% |
| ! | TTTTAACCGGGGCTCATATC+CGG | + | chr5.1:14938319-14938338 | MS.gene86546:CDS | 45.0% |
| !! | AGGAGGAAGGGTATTTCAGT+AGG | + | chr5.1:14936401-14936420 | MS.gene86546:intron | 45.0% |
| !! | GCCGGAATTTTGGAGAACAA+AGG | + | chr5.1:14937344-14937363 | MS.gene86546:CDS | 45.0% |
| !! | GGAGGAAGGGTATTTCAGTA+GGG | + | chr5.1:14936402-14936421 | MS.gene86546:intron | 45.0% |
| !!! | ACAGTTTTGCTCTAAGAGGG+AGG | + | chr5.1:14938439-14938458 | MS.gene86546:CDS | 45.0% |
| !!! | GCTCTAAGAGGGAGGATTTT+TGG | + | chr5.1:14938447-14938466 | MS.gene86546:CDS | 45.0% |
| !!! | TTTTGGAGAACAAAGGCGTC+GGG | + | chr5.1:14937351-14937370 | MS.gene86546:CDS | 45.0% |
| !! | AAATTATAATTATAAGAAAA+GGG | + | chr5.1:14936251-14936270 | MS.gene86546:intron | 5.0% |
| !!! | ATATATTGAATTTAATTTTT+TGG | + | chr5.1:14935358-14935377 | MS.gene86546:intron | 5.0% |
| AGCCACACACAAGGTTGTGT+GGG | - | chr5.1:14936500-14936519 | None:intergenic | 50.0% | |
| ATCAACCTTGCCACAAGGCT+TGG | - | chr5.1:14937118-14937137 | None:intergenic | 50.0% | |
| CGACGACCCATTTCCTATTC+AGG | - | chr5.1:14935439-14935458 | None:intergenic | 50.0% | |
| GAAAGACCCCTCAAGGTTGT+AGG | + | chr5.1:14936763-14936782 | MS.gene86546:intron | 50.0% | |
| GAAGAGAAACTTACCGGCAG+GGG | - | chr5.1:14936526-14936545 | None:intergenic | 50.0% | |
| GCAATATGCACCAAGCCTTG+TGG | + | chr5.1:14937105-14937124 | MS.gene86546:CDS | 50.0% | |
| GGAAAAGGTTATGTGGTCCG+AGG | + | chr5.1:14937805-14937824 | MS.gene86546:CDS | 50.0% | |
| TATCCGGAGGAAGCTTGAAG+CGG | + | chr5.1:14938335-14938354 | MS.gene86546:CDS | 50.0% | |
| TCGGGAACATCCACAGGAAA+AGG | + | chr5.1:14937369-14937388 | MS.gene86546:CDS | 50.0% | |
| TTGCCGTGTGCTTGATCGAT+TGG | - | chr5.1:14937089-14937108 | None:intergenic | 50.0% | |
| ! | AAGCCTTGTGGCAAGGTTGA+TGG | + | chr5.1:14937117-14937136 | MS.gene86546:CDS | 50.0% |
| ! | AGCCTTGTGGCAAGGTTGAT+GGG | + | chr5.1:14937118-14937137 | MS.gene86546:CDS | 50.0% |
| ! | GATGGATGGAGCCGGAATTT+TGG | + | chr5.1:14937334-14937353 | MS.gene86546:CDS | 50.0% |
| !! | AGGACCGGCACATTTTAACC+GGG | + | chr5.1:14938307-14938326 | MS.gene86546:CDS | 50.0% |
| !! | ATGACGGCGATGATGATGGA+TGG | + | chr5.1:14937320-14937339 | MS.gene86546:CDS | 50.0% |
| !! | GAGGACCGGCACATTTTAAC+CGG | + | chr5.1:14938306-14938325 | MS.gene86546:CDS | 50.0% |
| ACACTGCTGCACACAGATGC+AGG | - | chr5.1:14938992-14939011 | None:intergenic | 55.0% | |
| ACCCCATCAACCTTGCCACA+AGG | - | chr5.1:14937123-14937142 | None:intergenic | 55.0% | |
| AGCCCACACAACCTTGTGTG+TGG | + | chr5.1:14936495-14936514 | MS.gene86546:intron | 55.0% | |
| CAACCGCTTCAAGCTTCCTC+CGG | - | chr5.1:14938341-14938360 | None:intergenic | 55.0% | |
| CACAGCAGTCTCGTCTCTTG+AGG | - | chr5.1:14939074-14939093 | None:intergenic | 55.0% | |
| CGGCCCAGAAGGAGAATTAC+CGG | + | chr5.1:14935260-14935279 | MS.gene86546:CDS | 55.0% | |
| CTGCACACAGATGCAGGACT+CGG | - | chr5.1:14938986-14939005 | None:intergenic | 55.0% | |
| GAGCCACACACAAGGTTGTG+TGG | - | chr5.1:14936501-14936520 | None:intergenic | 55.0% | |
| GAGCCCCGGTTAAAATGTGC+CGG | - | chr5.1:14938314-14938333 | None:intergenic | 55.0% | |
| ! | ATGCACCAAGCCTTGTGGCA+AGG | + | chr5.1:14937110-14937129 | MS.gene86546:CDS | 55.0% |
| ! | TCTCAGAAGTACGGCCCAGA+AGG | + | chr5.1:14935249-14935268 | MS.gene86546:CDS | 55.0% |
| !! | GCCTTGTGGCAAGGTTGATG+GGG | + | chr5.1:14937119-14937138 | MS.gene86546:CDS | 55.0% |
| !! | GCGATGATGATGGATGGAGC+CGG | + | chr5.1:14937326-14937345 | MS.gene86546:CDS | 55.0% |
| !! | GGACCGGCACATTTTAACCG+GGG | + | chr5.1:14938308-14938327 | MS.gene86546:CDS | 55.0% |
| CACACAGATGCAGGACTCGG+AGG | - | chr5.1:14938983-14939002 | None:intergenic | 60.0% | |
| CTGGCTCCGCTACTGCTTAC+CGG | - | chr5.1:14935282-14935301 | None:intergenic | 60.0% | |
| CTTCCTCCGGATATGAGCCC+CGG | - | chr5.1:14938328-14938347 | None:intergenic | 60.0% | |
| GAGAAACTTACCGGCAGGGG+CGG | - | chr5.1:14936523-14936542 | None:intergenic | 60.0% | |
| GTTGTCGCCGCCTCAAGGAA+AGG | + | chr5.1:14939720-14939739 | MS.gene86546:CDS | 60.0% | |
| TAACCGGGGCTCATATCCGG+AGG | + | chr5.1:14938322-14938341 | MS.gene86546:CDS | 60.0% | |
| TCCATGTTGTCGCCGCCTCA+AGG | + | chr5.1:14939715-14939734 | MS.gene86546:CDS | 60.0% | |
| TCCTTGAGGCGGCGACAACA+TGG | - | chr5.1:14939719-14939738 | None:intergenic | 60.0% | |
| !! | AAGGCGTCGGGAACATCCAC+AGG | + | chr5.1:14937363-14937382 | MS.gene86546:CDS | 60.0% |
| CAGGGGCGGAGCCACACACA+AGG | - | chr5.1:14936509-14936528 | None:intergenic | 70.0% | |
| GTGTGTGGCTCCGCCCCTGC+CGG | + | chr5.1:14936510-14936529 | MS.gene86546:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 14934929 | 14939954 | 14934929 | ID=MS.gene86546 |
| chr5.1 | mRNA | 14934929 | 14939954 | 14934929 | ID=MS.gene86546.t1;Parent=MS.gene86546 |
| chr5.1 | exon | 14934929 | 14934968 | 14934929 | ID=MS.gene86546.t1.exon1;Parent=MS.gene86546.t1 |
| chr5.1 | CDS | 14934929 | 14934968 | 14934929 | ID=cds.MS.gene86546.t1;Parent=MS.gene86546.t1 |
| chr5.1 | exon | 14935205 | 14935281 | 14935205 | ID=MS.gene86546.t1.exon2;Parent=MS.gene86546.t1 |
| chr5.1 | CDS | 14935205 | 14935281 | 14935205 | ID=cds.MS.gene86546.t1;Parent=MS.gene86546.t1 |
| chr5.1 | exon | 14936998 | 14938578 | 14936998 | ID=MS.gene86546.t1.exon3;Parent=MS.gene86546.t1 |
| chr5.1 | CDS | 14936998 | 14938578 | 14936998 | ID=cds.MS.gene86546.t1;Parent=MS.gene86546.t1 |
| chr5.1 | exon | 14938962 | 14939130 | 14938962 | ID=MS.gene86546.t1.exon4;Parent=MS.gene86546.t1 |
| chr5.1 | CDS | 14938962 | 14939130 | 14938962 | ID=cds.MS.gene86546.t1;Parent=MS.gene86546.t1 |
| chr5.1 | exon | 14939323 | 14939954 | 14939323 | ID=MS.gene86546.t1.exon5;Parent=MS.gene86546.t1 |
| chr5.1 | CDS | 14939323 | 14939954 | 14939323 | ID=cds.MS.gene86546.t1;Parent=MS.gene86546.t1 |
| Gene Sequence |
| Protein sequence |
