Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87008.t1 | XP_024632867.1 | 96 | 479 | 12 | 3 | 11 | 488 | 12 | 484 | 3.10E-285 | 990.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87008.t1 | A0A1S3DX66 | 84.5 | 464 | 68 | 4 | 28 | 488 | 1 | 463 | 1.6e-246 | 861.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005469 | MS.gene87008 | PPI |
| MS.gene07359 | MS.gene87008 | PPI |
| MS.gene20903 | MS.gene87008 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87008.t1 | MTR_2g072850 | 95.332 | 407 | 13 | 3 | 87 | 488 | 1 | 406 | 0.0 | 808 |
| MS.gene87008.t1 | MTR_1g086170 | 58.737 | 475 | 183 | 5 | 18 | 488 | 15 | 480 | 0.0 | 578 |
| MS.gene87008.t1 | MTR_2g072880 | 100.000 | 70 | 0 | 0 | 11 | 80 | 12 | 81 | 4.46e-44 | 151 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87008.t1 | AT1G17030 | 64.463 | 484 | 163 | 6 | 8 | 488 | 15 | 492 | 0.0 | 644 |
| MS.gene87008.t1 | AT2G47010 | 59.714 | 489 | 177 | 6 | 20 | 492 | 7 | 491 | 0.0 | 582 |
| MS.gene87008.t1 | AT2G47010 | 59.714 | 489 | 177 | 6 | 20 | 492 | 7 | 491 | 0.0 | 582 |
| MS.gene87008.t1 | AT2G47010 | 60.532 | 451 | 158 | 6 | 20 | 454 | 7 | 453 | 0.0 | 546 |
| MS.gene87008.t1 | AT4G09965 | 54.412 | 68 | 28 | 3 | 427 | 492 | 148 | 214 | 1.72e-14 | 73.2 |
Find 128 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCAAGGCCATGGCAATTT+TGG | 0.102411 | 2.1:+25640357 | MS.gene87008:CDS |
| GCTACTAATGATGCAAATTT+AGG | 0.188556 | 2.1:+25640590 | MS.gene87008:CDS |
| AAACCGGGTGCGGCAAAATT+TGG | 0.201953 | 2.1:-25641547 | None:intergenic |
| GTCACTTACTTTGATGTTTA+CGG | 0.251158 | 2.1:-25636104 | None:intergenic |
| ATGAGGTAGAATTGGCTCTT+TGG | 0.289938 | 2.1:-25641221 | None:intergenic |
| TATGTCCATTTCACTGTATC+TGG | 0.292490 | 2.1:-25641309 | None:intergenic |
| TCCAAGTACATCGCATTTCC+TGG | 0.296878 | 2.1:-25641470 | None:intergenic |
| TTGCACGACGGTTCAGCTTC+CGG | 0.299722 | 2.1:-25641335 | None:intergenic |
| TGCACGACGGTTCAGCTTCC+GGG | 0.302729 | 2.1:-25641334 | None:intergenic |
| ACATCAAGCTCCCAAGTTCT+TGG | 0.314890 | 2.1:-25641620 | None:intergenic |
| ATTCTTGGACTTCCCATGTT+TGG | 0.320243 | 2.1:-25636057 | None:intergenic |
| CAACCTTCACCTTTCTTTGT+TGG | 0.329279 | 2.1:-25641587 | None:intergenic |
| TCAAAGCAATCAGCCATTCT+TGG | 0.331823 | 2.1:-25636072 | None:intergenic |
| CACCCGGTTTGGGGCGAATA+CGG | 0.332411 | 2.1:+25641560 | MS.gene87008:CDS |
| ATTATGAGAGGAAGTTTCTA+TGG | 0.344727 | 2.1:+25640551 | MS.gene87008:CDS |
| TCAGTTCCCAAGTCAATTGA+TGG | 0.350327 | 2.1:-25641874 | None:intergenic |
| TGCATGTTTATTTCTATTGT+TGG | 0.362091 | 2.1:+25635909 | MS.gene87008:CDS |
| ATAGAGAAGGTAGGCATCAT+AGG | 0.363316 | 2.1:-25641441 | None:intergenic |
| TCATGCCTCTAGTTTCATAA+TGG | 0.367780 | 2.1:-25640769 | None:intergenic |
| CCATGTCCATGAGGTAGAAT+TGG | 0.377010 | 2.1:-25641229 | None:intergenic |
| GGAAAATCATGTTGTGGAAA+TGG | 0.382470 | 2.1:-25640452 | None:intergenic |
| ATCCAAAATTGCCATGGCCT+TGG | 0.390045 | 2.1:-25640359 | None:intergenic |
| ACCTTAAAATGTGGTGACTT+TGG | 0.390926 | 2.1:-25641164 | None:intergenic |
| AGGAAGTTGGTAATGGAAGT+TGG | 0.407243 | 2.1:+25640654 | MS.gene87008:CDS |
| CTTCTTATTATTCAGTGACT+TGG | 0.408994 | 2.1:+25640627 | MS.gene87008:CDS |
| TACCCGTATTCGCCCCAAAC+CGG | 0.411510 | 2.1:-25641563 | None:intergenic |
| TGAGGCTGCGGGTTGCTATA+AGG | 0.416193 | 2.1:-25641515 | None:intergenic |
| GGACATTGTTCAAGATGGTT+GGG | 0.431398 | 2.1:-25641359 | None:intergenic |
| GAGGAAGTTTCTATGGTTCA+TGG | 0.446828 | 2.1:+25640558 | MS.gene87008:CDS |
| AGACTTCTTCTAAATATCCT+TGG | 0.453758 | 2.1:+25640696 | MS.gene87008:CDS |
| CAAGAGTGGGAGAACAAGTT+AGG | 0.459056 | 2.1:+25640233 | MS.gene87008:CDS |
| AGGACATTGTTCAAGATGGT+TGG | 0.459205 | 2.1:-25641360 | None:intergenic |
| TAACTGTCCATTCTGCTAGT+TGG | 0.463954 | 2.1:-25641915 | None:intergenic |
| CACAATTATACACAAGTGTA+TGG | 0.464120 | 2.1:+25640515 | MS.gene87008:CDS |
| TGCACATAATTTCAAACAAA+GGG | 0.466961 | 2.1:-25635884 | None:intergenic |
| TACCTTCTCTATCGTGCTCC+AGG | 0.468070 | 2.1:+25641452 | MS.gene87008:CDS |
| CTGCATCGGTTCGATGAACT+CGG | 0.469035 | 2.1:-25641409 | None:intergenic |
| ATATCAGCCATTGGAGATCC+TGG | 0.469372 | 2.1:+25635964 | MS.gene87008:CDS |
| GTATAATTGTGGTACATTGA+TGG | 0.474403 | 2.1:-25640503 | None:intergenic |
| GGATTGGTGATCCAAGAACT+TGG | 0.474749 | 2.1:+25641609 | MS.gene87008:CDS |
| CCTTATCATACCTTCTCAAA+TGG | 0.478700 | 2.1:+25641383 | MS.gene87008:CDS |
| ACCCGGTTTGGGGCGAATAC+GGG | 0.480308 | 2.1:+25641561 | MS.gene87008:CDS |
| GATGCTACTACAGGATTCTC+TGG | 0.483171 | 2.1:+25640740 | MS.gene87008:CDS |
| CCTTGGAAAGAGTTATACTT+AGG | 0.486605 | 2.1:+25640311 | MS.gene87008:CDS |
| CTTAGATCAGATGCTACTAC+AGG | 0.490538 | 2.1:+25640731 | MS.gene87008:CDS |
| TGTAACCAGATACAGTGAAA+TGG | 0.494064 | 2.1:+25641304 | MS.gene87008:CDS |
| TGGGAGAAGGAAGTTGGTAA+TGG | 0.497371 | 2.1:+25640647 | MS.gene87008:CDS |
| CACTTGATATCAAGAAAGGA+GGG | 0.497483 | 2.1:+25641195 | MS.gene87008:CDS |
| TAGAGAAGGTAGGCATCATA+GGG | 0.498127 | 2.1:-25641440 | None:intergenic |
| TGGAATCAATGCAATGAGGT+TGG | 0.500632 | 2.1:+25636024 | MS.gene87008:CDS |
| TTCTTATTATTCAGTGACTT+GGG | 0.502015 | 2.1:+25640628 | MS.gene87008:CDS |
| TCATGGACATGGGAAGTTGT+TGG | 0.502759 | 2.1:+25641240 | MS.gene87008:CDS |
| GGAGTATCTCTTGAGGCTGC+GGG | 0.502864 | 2.1:-25641526 | None:intergenic |
| TGGAGTATCTCTTGAGGCTG+CGG | 0.503368 | 2.1:-25641527 | None:intergenic |
| AGGAAGTTTCTATGGTTCAT+GGG | 0.503598 | 2.1:+25640559 | MS.gene87008:CDS |
| TCCAGGAAATGCGATGTACT+TGG | 0.503983 | 2.1:+25641469 | MS.gene87008:CDS |
| ACAATGGAAAGCCGTGCGAC+GGG | 0.508747 | 2.1:+25641267 | MS.gene87008:CDS |
| GTGACTTGGGAGAAGGAAGT+TGG | 0.509085 | 2.1:+25640641 | MS.gene87008:CDS |
| AGAACTTGGGAGCTTGATGT+TGG | 0.511845 | 2.1:+25641623 | MS.gene87008:CDS |
| ACCCGTATTCGCCCCAAACC+GGG | 0.512133 | 2.1:-25641562 | None:intergenic |
| GGAACTGAAATATACATTAG+TGG | 0.514785 | 2.1:+25641889 | MS.gene87008:CDS |
| CCAATTCTACCTCATGGACA+TGG | 0.515374 | 2.1:+25641229 | MS.gene87008:CDS |
| TTACTCCAATAATGGAGCTA+TGG | 0.519160 | 2.1:+25635854 | None:intergenic |
| TATTCGCCCCAAACCGGGTG+CGG | 0.522348 | 2.1:-25641557 | None:intergenic |
| CAACAAAGAAAGGTGAAGGT+TGG | 0.528934 | 2.1:+25641588 | MS.gene87008:CDS |
| TTCACACTTGATATCAAGAA+AGG | 0.531105 | 2.1:+25641191 | MS.gene87008:CDS |
| TAAGGATCAGATGGTATCAC+TGG | 0.533443 | 2.1:-25641497 | None:intergenic |
| TGGAAAAGAAGCACCAAACA+TGG | 0.533992 | 2.1:+25636044 | MS.gene87008:CDS |
| AAGGAGGACATTGTTCAAGA+TGG | 0.534215 | 2.1:-25641364 | None:intergenic |
| CCATTTGAGAAGGTATGATA+AGG | 0.536448 | 2.1:-25641383 | None:intergenic |
| CCTAAGTATAACTCTTTCCA+AGG | 0.538349 | 2.1:-25640311 | None:intergenic |
| TACGGGTATCCAACAAAGAA+AGG | 0.538937 | 2.1:+25641578 | MS.gene87008:CDS |
| CAAGATTATATATCAGCCAT+TGG | 0.539164 | 2.1:+25635955 | MS.gene87008:CDS |
| TTATTCAGTGACTTGGGAGA+AGG | 0.541291 | 2.1:+25640634 | MS.gene87008:CDS |
| TGGATGATAATGCTCAAAAG+TGG | 0.542138 | 2.1:+25640377 | MS.gene87008:CDS |
| ACACTGGCCATCAATTGACT+TGG | 0.543082 | 2.1:+25641867 | MS.gene87008:CDS |
| AAGAAAGGTGAAGGTTGGAT+TGG | 0.543649 | 2.1:+25641593 | MS.gene87008:CDS |
| AAAGAGCCAATTCTACCTCA+TGG | 0.544588 | 2.1:+25641223 | MS.gene87008:CDS |
| CATACACTTGTGTATAATTG+TGG | 0.547171 | 2.1:-25640514 | None:intergenic |
| GATGGCCAGTGTCTCTCCAC+AGG | 0.551826 | 2.1:-25641856 | None:intergenic |
| AACAATGGAAAGCCGTGCGA+CGG | 0.555621 | 2.1:+25641266 | MS.gene87008:CDS |
| CTCTCCACAGGTTCAGTACG+TGG | 0.558924 | 2.1:-25641844 | None:intergenic |
| AAACATGGGAAGTCCAAGAA+TGG | 0.564081 | 2.1:+25636059 | MS.gene87008:CDS |
| ATAGGGGAACTTAGCTGCAT+CGG | 0.568415 | 2.1:-25641423 | None:intergenic |
| CTGAACCTGTGGAGAGACAC+TGG | 0.569297 | 2.1:+25641851 | MS.gene87008:CDS |
| TGAGAGTTGCTATTGAGTCA+TGG | 0.577116 | 2.1:+25636004 | MS.gene87008:CDS |
| AACTCGGGTGCCATTTGAGA+AGG | 0.584910 | 2.1:-25641393 | None:intergenic |
| GATTGGTGATCCAAGAACTT+GGG | 0.585095 | 2.1:+25641610 | MS.gene87008:CDS |
| CACTGGCCATCAATTGACTT+GGG | 0.586693 | 2.1:+25641868 | MS.gene87008:CDS |
| AATGCTCAAAAGTGGAAACA+TGG | 0.590612 | 2.1:+25640385 | MS.gene87008:CDS |
| AAACAAGGAAAATCATGTTG+TGG | 0.591297 | 2.1:-25640458 | None:intergenic |
| ATGCAGACATGTATGCACCT+TGG | 0.592365 | 2.1:+25640294 | MS.gene87008:CDS |
| TAATTCACAAGGTGCAAGAG+TGG | 0.592701 | 2.1:+25640219 | MS.gene87008:CDS |
| TTTCATACCAGGATCTCCAA+TGG | 0.594452 | 2.1:-25635971 | None:intergenic |
| ATGCACATAATTTCAAACAA+AGG | 0.594624 | 2.1:-25635885 | None:intergenic |
| GTGGTGGCCAACTAGCAGAA+TGG | 0.594829 | 2.1:+25641908 | MS.gene87008:CDS |
| GGAAGTTGTTGGAAGAACAA+TGG | 0.597086 | 2.1:+25641251 | MS.gene87008:CDS |
| GTTGAAAAGAAGATTATGAG+AGG | 0.603083 | 2.1:+25640539 | MS.gene87008:CDS |
| AGATGGTTGGGTTTGCACGA+CGG | 0.607042 | 2.1:-25641347 | None:intergenic |
| TTTGAGAAGGTATGATAAGG+AGG | 0.612656 | 2.1:-25641380 | None:intergenic |
| GATCCTGGTATGAAAAGAGA+TGG | 0.612704 | 2.1:+25635979 | MS.gene87008:CDS |
| AATTCACAAGGTGCAAGAGT+GGG | 0.616537 | 2.1:+25640220 | MS.gene87008:CDS |
| CAGTGAAATGGACATAAACC+CGG | 0.617735 | 2.1:+25641316 | MS.gene87008:CDS |
| TATCCAACAAAGAAAGGTGA+AGG | 0.620362 | 2.1:+25641584 | MS.gene87008:CDS |
| ACACTTGATATCAAGAAAGG+AGG | 0.620950 | 2.1:+25641194 | MS.gene87008:CDS |
| CTTGATATCAAGAAAGGAGG+GGG | 0.623013 | 2.1:+25641197 | MS.gene87008:CDS |
| ATTATCATCCAAAATTGCCA+TGG | 0.624144 | 2.1:-25640365 | None:intergenic |
| TGCATCGGTTCGATGAACTC+GGG | 0.625299 | 2.1:-25641408 | None:intergenic |
| CAATTCTACCTCATGGACAT+GGG | 0.628930 | 2.1:+25641230 | MS.gene87008:CDS |
| AAAATTTGGAGTATCTCTTG+AGG | 0.629876 | 2.1:-25641533 | None:intergenic |
| CAATGGAAAGCCGTGCGACG+GGG | 0.635908 | 2.1:+25641268 | MS.gene87008:CDS |
| GGATCCACGTACTGAACCTG+TGG | 0.644812 | 2.1:+25641840 | MS.gene87008:intron |
| GGAAAAGAAGCACCAAACAT+GGG | 0.648825 | 2.1:+25636045 | MS.gene87008:CDS |
| GGGTTGCTATAAGGATCAGA+TGG | 0.650869 | 2.1:-25641506 | None:intergenic |
| ATACACCCTTCTCCAAAACA+AGG | 0.651141 | 2.1:-25640473 | None:intergenic |
| ACTTGATATCAAGAAAGGAG+GGG | 0.653164 | 2.1:+25641196 | MS.gene87008:CDS |
| GATGTGACATCCCCGTCGCA+CGG | 0.655142 | 2.1:-25641278 | None:intergenic |
| TTCCTGGAGCACGATAGAGA+AGG | 0.658420 | 2.1:-25641454 | None:intergenic |
| ACTGAAATATACATTAGTGG+TGG | 0.661752 | 2.1:+25641892 | MS.gene87008:CDS |
| CTAAGATAAAGCATCAACCA+AGG | 0.667233 | 2.1:-25640713 | None:intergenic |
| TGGAGCACGATAGAGAAGGT+AGG | 0.668058 | 2.1:-25641450 | None:intergenic |
| GGTTACCATTATGAAACTAG+AGG | 0.672011 | 2.1:+25640764 | MS.gene87008:CDS |
| AAAGGTGAAATTAATTCACA+AGG | 0.673584 | 2.1:+25640208 | MS.gene87008:CDS |
| AACAACTTCCCATGTCCATG+AGG | 0.684995 | 2.1:-25641238 | None:intergenic |
| GTGAACCTTACCTTAAAATG+TGG | 0.685307 | 2.1:-25641173 | None:intergenic |
| GCTACTACAGGATTCTCTGG+TGG | 0.687235 | 2.1:+25640743 | MS.gene87008:CDS |
| AGAGAAGGTAGGCATCATAG+GGG | 0.755842 | 2.1:-25641439 | None:intergenic |
| GTCATGGAATCAATGCAATG+AGG | 0.758170 | 2.1:+25636020 | MS.gene87008:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATGTTTTTTTTTTTTGT+TGG | + | chr2.1:25639010-25639029 | MS.gene87008:intron | 10.0% |
| !!! | ATTTAATTTTAAGTATTGTT+CGG | - | chr2.1:25637731-25637750 | None:intergenic | 10.0% |
| !!! | ATTTTAATTTCTAAATTTGT+TGG | + | chr2.1:25638803-25638822 | MS.gene87008:intron | 10.0% |
| !! | AAAGAAAGAGATAATAATTA+AGG | - | chr2.1:25638000-25638019 | None:intergenic | 15.0% |
| !! | ATAAATTCAATTATGTTTGT+TGG | - | chr2.1:25638675-25638694 | None:intergenic | 15.0% |
| !! | TTAATTAGCATTAATTGTTA+TGG | + | chr2.1:25639463-25639482 | MS.gene87008:intron | 15.0% |
| !! | TTATTAGTAAATACTCAAAT+TGG | + | chr2.1:25640840-25640859 | MS.gene87008:intron | 15.0% |
| !!! | ATTGTTATTGATTTTGTTTT+TGG | + | chr2.1:25639136-25639155 | MS.gene87008:intron | 15.0% |
| !!! | TTGATTGAATATTGTAATTT+TGG | + | chr2.1:25636171-25636190 | MS.gene87008:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTTGAGGA+AGG | + | chr2.1:25638839-25638858 | MS.gene87008:intron | 15.0% |
| !! | ATCAAGTGATTAAATATGAT+AGG | - | chr2.1:25636268-25636287 | None:intergenic | 20.0% |
| !! | ATGAAAATACATTCATACAT+GGG | - | chr2.1:25639330-25639349 | None:intergenic | 20.0% |
| !! | ATTCTACTAACATCTTAAAT+TGG | + | chr2.1:25637005-25637024 | MS.gene87008:intron | 20.0% |
| !! | CATAACATATTTAAACAAGA+GGG | + | chr2.1:25641040-25641059 | MS.gene87008:intron | 20.0% |
| !! | GTTAGTAGAATTTGAATTAA+GGG | - | chr2.1:25636996-25637015 | None:intergenic | 20.0% |
| !! | TACAAAAACTAAGTACTTAT+AGG | + | chr2.1:25636825-25636844 | MS.gene87008:intron | 20.0% |
| !! | TATCATTTCTCATTCATAAA+TGG | - | chr2.1:25639237-25639256 | None:intergenic | 20.0% |
| !! | TCATAACATATTTAAACAAG+AGG | + | chr2.1:25641039-25641058 | MS.gene87008:intron | 20.0% |
| !! | TGTTAGTAGAATTTGAATTA+AGG | - | chr2.1:25636997-25637016 | None:intergenic | 20.0% |
| !! | TTAGTAGAATTTGAATTAAG+GGG | - | chr2.1:25636995-25637014 | None:intergenic | 20.0% |
| !!! | ATCATAGTTTTGCAATTTTA+GGG | - | chr2.1:25640919-25640938 | None:intergenic | 20.0% |
| !!! | TCAATCTCTTTATTTTTATC+AGG | + | chr2.1:25641655-25641674 | MS.gene87008:CDS | 20.0% |
| !!! | TCTAAATTGGTACAATTTTA+AGG | - | chr2.1:25640867-25640886 | None:intergenic | 20.0% |
| !!! | TCTTTGAGATAAAATTTTGT+AGG | + | chr2.1:25641139-25641158 | MS.gene87008:intron | 20.0% |
| !!! | TTCAATAAGCATAATCTTTT+GGG | - | chr2.1:25641960-25641979 | None:intergenic | 20.0% |
| !!! | TTTCAATAAGCATAATCTTT+TGG | - | chr2.1:25641961-25641980 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTGTTGGTAG+TGG | + | chr2.1:25639016-25639035 | MS.gene87008:intron | 20.0% |
| ! | AAAAATCATGCTTACTACAT+TGG | - | chr2.1:25636497-25636516 | None:intergenic | 25.0% |
| ! | AAAGGTGAAATTAATTCACA+AGG | + | chr2.1:25640208-25640227 | MS.gene87008:CDS | 25.0% |
| ! | AATAATTAAGGCTATGTTCT+TGG | - | chr2.1:25637988-25638007 | None:intergenic | 25.0% |
| ! | AATCACAAATGGAAAACATA+AGG | - | chr2.1:25636226-25636245 | None:intergenic | 25.0% |
| ! | AATGATGTCACATAAGTATA+TGG | + | chr2.1:25638746-25638765 | MS.gene87008:intron | 25.0% |
| ! | ATAAATCCAACTATGTTTGT+TGG | - | chr2.1:25636932-25636951 | None:intergenic | 25.0% |
| ! | ATACTTAGGTAAAAAATGTG+AGG | + | chr2.1:25640325-25640344 | MS.gene87008:CDS | 25.0% |
| ! | ATAGAAGGTTAATGAAATTC+AGG | - | chr2.1:25637254-25637273 | None:intergenic | 25.0% |
| ! | ATCAAACCAATCAGAAAATT+AGG | - | chr2.1:25639554-25639573 | None:intergenic | 25.0% |
| ! | ATCATTTCAAGAAAAAGTCA+AGG | - | chr2.1:25641695-25641714 | None:intergenic | 25.0% |
| ! | ATGCACATAATTTCAAACAA+AGG | - | chr2.1:25635888-25635907 | None:intergenic | 25.0% |
| ! | ATTCTAATGTTAGTTAGTTG+TGG | - | chr2.1:25638698-25638717 | None:intergenic | 25.0% |
| ! | CATATTCTGTCTATTATAGA+AGG | - | chr2.1:25637269-25637288 | None:intergenic | 25.0% |
| ! | CTTAGCTTAAAATTCATTCA+TGG | - | chr2.1:25640997-25641016 | None:intergenic | 25.0% |
| ! | CTTCAATGAAACAAGTAATT+TGG | + | chr2.1:25637349-25637368 | MS.gene87008:intron | 25.0% |
| ! | CTTCCTTAAAAGTAATACAA+AGG | + | chr2.1:25640076-25640095 | MS.gene87008:intron | 25.0% |
| ! | GATGAAAATACATTCATACA+TGG | - | chr2.1:25639331-25639350 | None:intergenic | 25.0% |
| ! | TAAACCAAAGTATATCAAGT+TGG | - | chr2.1:25639847-25639866 | None:intergenic | 25.0% |
| ! | TAGAAGGTTAATGAAATTCA+GGG | - | chr2.1:25637253-25637272 | None:intergenic | 25.0% |
| ! | TAGTAGAATTTGAATTAAGG+GGG | - | chr2.1:25636994-25637013 | None:intergenic | 25.0% |
| ! | TCAAACCAATCAGAAAATTA+GGG | - | chr2.1:25639553-25639572 | None:intergenic | 25.0% |
| ! | TCACAAAAGTTGTCTAAAAA+TGG | - | chr2.1:25639269-25639288 | None:intergenic | 25.0% |
| ! | TGCACATAATTTCAAACAAA+GGG | - | chr2.1:25635887-25635906 | None:intergenic | 25.0% |
| ! | TGGATAAGAATTTACGAAAA+AGG | + | chr2.1:25639700-25639719 | MS.gene87008:intron | 25.0% |
| ! | TTATATTGATCACTCGAATA+AGG | - | chr2.1:25639815-25639834 | None:intergenic | 25.0% |
| ! | TTCTTATTATTCAGTGACTT+GGG | + | chr2.1:25640628-25640647 | MS.gene87008:CDS | 25.0% |
| ! | TTCTTTATGAATCGTATTTG+TGG | + | chr2.1:25639294-25639313 | MS.gene87008:intron | 25.0% |
| !! | AATGTATTTTCATCTCACTA+AGG | + | chr2.1:25639337-25639356 | MS.gene87008:intron | 25.0% |
| !! | ATAAGATTGATGACATATTC+AGG | - | chr2.1:25637389-25637408 | None:intergenic | 25.0% |
| !! | TCAATAAATGATGTCACTTA+TGG | + | chr2.1:25636403-25636422 | MS.gene87008:intron | 25.0% |
| !! | TTGTTGTTCACTTGAAAATT+CGG | - | chr2.1:25637646-25637665 | None:intergenic | 25.0% |
| !!! | AGTTTTTTCAAGTCAAGAAA+TGG | - | chr2.1:25638191-25638210 | None:intergenic | 25.0% |
| !!! | CATCCTTTGTATTACTTTTA+AGG | - | chr2.1:25640082-25640101 | None:intergenic | 25.0% |
| !!! | CTCGTATTATTTTAGAACTT+TGG | + | chr2.1:25639680-25639699 | MS.gene87008:intron | 25.0% |
| !!! | GATCATAGTTTTGCAATTTT+AGG | - | chr2.1:25640920-25640939 | None:intergenic | 25.0% |
| !!! | GTTTTTTCAAGTCAAGAAAT+GGG | - | chr2.1:25638190-25638209 | None:intergenic | 25.0% |
| !!! | TGCATGTTTATTTCTATTGT+TGG | + | chr2.1:25635909-25635928 | MS.gene87008:CDS | 25.0% |
| AAACAAGGAAAATCATGTTG+TGG | - | chr2.1:25640461-25640480 | None:intergenic | 30.0% | |
| AACGTAATTTCTGCACAAAT+GGG | - | chr2.1:25639908-25639927 | None:intergenic | 30.0% | |
| AACTAACCAACAAACATAGT+TGG | + | chr2.1:25636923-25636942 | MS.gene87008:intron | 30.0% | |
| ACTGAAATATACATTAGTGG+TGG | + | chr2.1:25641892-25641911 | MS.gene87008:CDS | 30.0% | |
| ACTTAAAGAGGAAACTACAA+AGG | + | chr2.1:25636724-25636743 | MS.gene87008:intron | 30.0% | |
| ACTTAGAGAGAAAACTACAA+AGG | + | chr2.1:25638487-25638506 | MS.gene87008:intron | 30.0% | |
| AGACTTCTTCTAAATATCCT+TGG | + | chr2.1:25640696-25640715 | MS.gene87008:CDS | 30.0% | |
| AGAGAAAGATTAGAATGTTC+TGG | + | chr2.1:25636651-25636670 | MS.gene87008:intron | 30.0% | |
| AGAGCTATCAAAATCACAAA+TGG | - | chr2.1:25636237-25636256 | None:intergenic | 30.0% | |
| AGTGATCAATATAACTTGAG+AGG | + | chr2.1:25639821-25639840 | MS.gene87008:intron | 30.0% | |
| ATAATTCGATCTAACTCTCT+TGG | + | chr2.1:25637557-25637576 | MS.gene87008:intron | 30.0% | |
| ATCCATGAAAGGAGATAAAA+AGG | - | chr2.1:25638064-25638083 | None:intergenic | 30.0% | |
| ATTATCATCCAAAATTGCCA+TGG | - | chr2.1:25640368-25640387 | None:intergenic | 30.0% | |
| ATTATGAGAGGAAGTTTCTA+TGG | + | chr2.1:25640551-25640570 | MS.gene87008:CDS | 30.0% | |
| ATTATGATCACTAGCAGAAA+AGG | + | chr2.1:25640190-25640209 | MS.gene87008:intron | 30.0% | |
| CAAGATTATATATCAGCCAT+TGG | + | chr2.1:25635955-25635974 | MS.gene87008:CDS | 30.0% | |
| CACAATTATACACAAGTGTA+TGG | + | chr2.1:25640515-25640534 | MS.gene87008:CDS | 30.0% | |
| CATACACTTGTGTATAATTG+TGG | - | chr2.1:25640517-25640536 | None:intergenic | 30.0% | |
| CGCAACATCAAAATATATCA+AGG | + | chr2.1:25641082-25641101 | MS.gene87008:intron | 30.0% | |
| CTTCTTATTATTCAGTGACT+TGG | + | chr2.1:25640627-25640646 | MS.gene87008:CDS | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr2.1:25639061-25639080 | None:intergenic | 30.0% | |
| GATCATTCCAAAATTGATAG+TGG | - | chr2.1:25641744-25641763 | None:intergenic | 30.0% | |
| GCTACTAATGATGCAAATTT+AGG | + | chr2.1:25640590-25640609 | MS.gene87008:CDS | 30.0% | |
| GCTGTTAACATATTTAATGC+AGG | + | chr2.1:25641819-25641838 | MS.gene87008:intron | 30.0% | |
| GGAACTGAAATATACATTAG+TGG | + | chr2.1:25641889-25641908 | MS.gene87008:CDS | 30.0% | |
| GTATAATTGTGGTACATTGA+TGG | - | chr2.1:25640506-25640525 | None:intergenic | 30.0% | |
| GTCACTTACTTTGATGTTTA+CGG | - | chr2.1:25636107-25636126 | None:intergenic | 30.0% | |
| GTTGAAAAGAAGATTATGAG+AGG | + | chr2.1:25640539-25640558 | MS.gene87008:CDS | 30.0% | |
| TACAGAATTGAGAGAAAGAT+TGG | + | chr2.1:25636641-25636660 | MS.gene87008:intron | 30.0% | |
| TCACCTTATCCATACATTTA+TGG | + | chr2.1:25637961-25637980 | MS.gene87008:intron | 30.0% | |
| TCTAGTCCCTAAAATATCAA+CGG | - | chr2.1:25640955-25640974 | None:intergenic | 30.0% | |
| TGGATAAGGTGAATTCATAT+TGG | - | chr2.1:25637953-25637972 | None:intergenic | 30.0% | |
| TTATGGATCCACTTTATGAA+AGG | + | chr2.1:25639480-25639499 | MS.gene87008:intron | 30.0% | |
| TTCACACTTGATATCAAGAA+AGG | + | chr2.1:25641191-25641210 | MS.gene87008:CDS | 30.0% | |
| ! | AAAAATCATGCTTGCTACAT+TGG | - | chr2.1:25636293-25636312 | None:intergenic | 30.0% |
| ! | AAAATTTGGAGTATCTCTTG+AGG | - | chr2.1:25641536-25641555 | None:intergenic | 30.0% |
| ! | AATACAAGATTTTCTATGCG+AGG | - | chr2.1:25637317-25637336 | None:intergenic | 30.0% |
| ! | ACTATGTTTGTTGGTTAGTT+AGG | - | chr2.1:25636923-25636942 | None:intergenic | 30.0% |
| ! | ATAAATGATGTCACTTATGG+TGG | + | chr2.1:25636608-25636627 | MS.gene87008:intron | 30.0% |
| ! | TTCCATCCGTTGATATTTTA+GGG | + | chr2.1:25640946-25640965 | MS.gene87008:intron | 30.0% |
| ! | TTCTACCAAAAGTGCAAATA+AGG | - | chr2.1:25637925-25637944 | None:intergenic | 30.0% |
| ! | TTTCCATCCGTTGATATTTT+AGG | + | chr2.1:25640945-25640964 | MS.gene87008:intron | 30.0% |
| ! | TTTTATGAAGAATTGCAAGG+AGG | - | chr2.1:25637708-25637727 | None:intergenic | 30.0% |
| !! | CAACATGATTTTCCTTGTTT+TGG | + | chr2.1:25640461-25640480 | MS.gene87008:CDS | 30.0% |
| !! | CTAGTTAGTTAGTTTGTTAG+TGG | - | chr2.1:25636877-25636896 | None:intergenic | 30.0% |
| !! | GTAGTAAGTTTTTGTTTGAG+TGG | + | chr2.1:25639407-25639426 | MS.gene87008:intron | 30.0% |
| !! | GTCAATAATGGCTTTTGAAA+AGG | - | chr2.1:25638214-25638233 | None:intergenic | 30.0% |
| !! | TTGTGATTTTGATAGCTCTT+AGG | + | chr2.1:25636238-25636257 | MS.gene87008:intron | 30.0% |
| !!! | ATTTTCCTTGTTTTGGAGAA+GGG | + | chr2.1:25640468-25640487 | MS.gene87008:CDS | 30.0% |
| !!! | CTGATCACTTTTTTCTTCTT+CGG | + | chr2.1:25637851-25637870 | MS.gene87008:intron | 30.0% |
| !!! | CTGCATTTTTTGTCTTCAAA+AGG | - | chr2.1:25640280-25640299 | None:intergenic | 30.0% |
| !!! | TCAGCTTTGAAACCATTTTT+TGG | - | chr2.1:25640431-25640450 | None:intergenic | 30.0% |
| AAAAGAGTAATGAACGTTGC+TGG | - | chr2.1:25639213-25639232 | None:intergenic | 35.0% | |
| AAGCTAAGTCGATAATGTCA+CGG | + | chr2.1:25641009-25641028 | MS.gene87008:intron | 35.0% | |
| AATCCAAAAAGAGGAAGAGA+AGG | - | chr2.1:25638100-25638119 | None:intergenic | 35.0% | |
| AATGCTCAAAAGTGGAAACA+TGG | + | chr2.1:25640385-25640404 | MS.gene87008:CDS | 35.0% | |
| ACACTTCTCACCTTACAAAT+CGG | + | chr2.1:25639725-25639744 | MS.gene87008:intron | 35.0% | |
| ACACTTGATATCAAGAAAGG+AGG | + | chr2.1:25641194-25641213 | MS.gene87008:CDS | 35.0% | |
| ACCTTAAAATGTGGTGACTT+TGG | - | chr2.1:25641167-25641186 | None:intergenic | 35.0% | |
| ACGAATACCTAGACTCTATT+AGG | + | chr2.1:25639175-25639194 | MS.gene87008:intron | 35.0% | |
| ACGTAATTTCTGCACAAATG+GGG | - | chr2.1:25639907-25639926 | None:intergenic | 35.0% | |
| ACTTGATATCAAGAAAGGAG+GGG | + | chr2.1:25641196-25641215 | MS.gene87008:CDS | 35.0% | |
| AGAGAAAGATTGGAATGTTC+TGG | + | chr2.1:25638414-25638433 | MS.gene87008:intron | 35.0% | |
| AGGAAGTTTCTATGGTTCAT+GGG | + | chr2.1:25640559-25640578 | MS.gene87008:CDS | 35.0% | |
| AGGGTTAAAACCAGTTCAAT+TGG | + | chr2.1:25638949-25638968 | MS.gene87008:intron | 35.0% | |
| ATGCAAAGGTTATTAGCACT+TGG | - | chr2.1:25638254-25638273 | None:intergenic | 35.0% | |
| ATGCTCAAATGTCAACAACT+AGG | + | chr2.1:25639773-25639792 | MS.gene87008:intron | 35.0% | |
| CAACAACTAGGACTTCAAAA+AGG | + | chr2.1:25639785-25639804 | MS.gene87008:intron | 35.0% | |
| CAACGTAATTTCTGCACAAA+TGG | - | chr2.1:25639909-25639928 | None:intergenic | 35.0% | |
| CACTTGATATCAAGAAAGGA+GGG | + | chr2.1:25641195-25641214 | MS.gene87008:CDS | 35.0% | |
| CACTTGGTTATTGATACATG+TGG | - | chr2.1:25638238-25638257 | None:intergenic | 35.0% | |
| CCTAAGTATAACTCTTTCCA+AGG | - | chr2.1:25640314-25640333 | None:intergenic | 35.0% | |
| CCTTATCATACCTTCTCAAA+TGG | + | chr2.1:25641383-25641402 | MS.gene87008:CDS | 35.0% | |
| CCTTGGAAAGAGTTATACTT+AGG | + | chr2.1:25640311-25640330 | MS.gene87008:CDS | 35.0% | |
| CGAAGAAGAAAAAAGTGATC+AGG | - | chr2.1:25637853-25637872 | None:intergenic | 35.0% | |
| CTTCAGTAAACCAATTGAAC+TGG | - | chr2.1:25638962-25638981 | None:intergenic | 35.0% | |
| GAAATCACCTAATAGAGTCT+AGG | - | chr2.1:25639185-25639204 | None:intergenic | 35.0% | |
| GATAATGCGAGAGTCTAAAT+TGG | - | chr2.1:25640880-25640899 | None:intergenic | 35.0% | |
| GCTGCAATTTGTCCAAAAAA+TGG | + | chr2.1:25640416-25640435 | MS.gene87008:CDS | 35.0% | |
| GGAAAATCATGTTGTGGAAA+TGG | - | chr2.1:25640455-25640474 | None:intergenic | 35.0% | |
| GGGACTAGAATGTCATTAAT+TGG | + | chr2.1:25640966-25640985 | MS.gene87008:intron | 35.0% | |
| GGTCCATAAATGTATGGATA+AGG | - | chr2.1:25637967-25637986 | None:intergenic | 35.0% | |
| GGTTACCATTATGAAACTAG+AGG | + | chr2.1:25640764-25640783 | MS.gene87008:CDS | 35.0% | |
| GTAACCTTGTTCTTCTTCTT+CGG | + | chr2.1:25637770-25637789 | MS.gene87008:intron | 35.0% | |
| GTGAACCTTACCTTAAAATG+TGG | - | chr2.1:25641176-25641195 | None:intergenic | 35.0% | |
| GTGAGGATACAAGAAATCTT+TGG | - | chr2.1:25638156-25638175 | None:intergenic | 35.0% | |
| GTTCAAGATTCCAAGAAAGA+GGG | - | chr2.1:25637595-25637614 | None:intergenic | 35.0% | |
| GTTCTTGGTCCATAAATGTA+TGG | - | chr2.1:25637973-25637992 | None:intergenic | 35.0% | |
| GTTTCAAACAAAGCTCAACA+AGG | - | chr2.1:25637879-25637898 | None:intergenic | 35.0% | |
| TAATCTCAGCATAGAACGTT+CGG | - | chr2.1:25638446-25638465 | None:intergenic | 35.0% | |
| TATCCAACAAAGAAAGGTGA+AGG | + | chr2.1:25641584-25641603 | MS.gene87008:CDS | 35.0% | |
| TATGTCCATTTCACTGTATC+TGG | - | chr2.1:25641312-25641331 | None:intergenic | 35.0% | |
| TCATCTCACTAAGGAACAAA+CGG | + | chr2.1:25639346-25639365 | MS.gene87008:intron | 35.0% | |
| TCATTATCAACCTAGCAACA+AGG | - | chr2.1:25638295-25638314 | None:intergenic | 35.0% | |
| TGTAACCAGATACAGTGAAA+TGG | + | chr2.1:25641304-25641323 | MS.gene87008:CDS | 35.0% | |
| TTCAAGATTCCAAGAAAGAG+GGG | - | chr2.1:25637594-25637613 | None:intergenic | 35.0% | |
| TTCAGTCAGATGAGGAAATA+GGG | - | chr2.1:25637446-25637465 | None:intergenic | 35.0% | |
| TTGCTAGAAAAGATCCAAAG+TGG | - | chr2.1:25638123-25638142 | None:intergenic | 35.0% | |
| TTGCTCAACCTTTCATAAAG+TGG | - | chr2.1:25639491-25639510 | None:intergenic | 35.0% | |
| ! | ACCAAAGTCACCACATTTTA+AGG | + | chr2.1:25641163-25641182 | MS.gene87008:CDS | 35.0% |
| ! | AGCCTTTTTATCTCCTTTCA+TGG | + | chr2.1:25638059-25638078 | MS.gene87008:intron | 35.0% |
| ! | ATGAACTGCAATCTCTTTTG+CGG | + | chr2.1:25638311-25638330 | MS.gene87008:intron | 35.0% |
| ! | ATGAGCTCCACTATCAATTT+TGG | + | chr2.1:25641734-25641753 | MS.gene87008:intron | 35.0% |
| ! | ATTTTCTATGCGAGGAAACA+TGG | - | chr2.1:25637309-25637328 | None:intergenic | 35.0% |
| ! | CCATTTGAGAAGGTATGATA+AGG | - | chr2.1:25641386-25641405 | None:intergenic | 35.0% |
| ! | CTAAGATAAAGCATCAACCA+AGG | - | chr2.1:25640716-25640735 | None:intergenic | 35.0% |
| ! | GAAAGCCCTAATTTTCTGAT+TGG | + | chr2.1:25639545-25639564 | MS.gene87008:intron | 35.0% |
| ! | GATACATGTGGTGTCAATAA+TGG | - | chr2.1:25638226-25638245 | None:intergenic | 35.0% |
| ! | GCTCTCACACATTTTTAATC+GGG | + | chr2.1:25636193-25636212 | MS.gene87008:intron | 35.0% |
| ! | GCTTACAAATCCGATTTGTA+AGG | - | chr2.1:25639738-25639757 | None:intergenic | 35.0% |
| ! | GGCTCTCACACATTTTTAAT+CGG | + | chr2.1:25636192-25636211 | MS.gene87008:intron | 35.0% |
| ! | TCATGCCTCTAGTTTCATAA+TGG | - | chr2.1:25640772-25640791 | None:intergenic | 35.0% |
| ! | TGGATGATAATGCTCAAAAG+TGG | + | chr2.1:25640377-25640396 | MS.gene87008:CDS | 35.0% |
| ! | TTTGAGAAGGTATGATAAGG+AGG | - | chr2.1:25641383-25641402 | None:intergenic | 35.0% |
| !! | CATGGTAATGGTTTATGCAA+AGG | - | chr2.1:25638268-25638287 | None:intergenic | 35.0% |
| !! | CGGTTTTATGAAGAATTGCA+AGG | - | chr2.1:25637711-25637730 | None:intergenic | 35.0% |
| !! | GATGTTGTTTCAAGTGATGA+AGG | - | chr2.1:25637525-25637544 | None:intergenic | 35.0% |
| !! | GATTGATTTTGATGTCGTGT+TGG | - | chr2.1:25640140-25640159 | None:intergenic | 35.0% |
| !!! | AGTCACCACATTTTAAGGTA+AGG | + | chr2.1:25641168-25641187 | MS.gene87008:CDS | 35.0% |
| !!! | GATTTTCCTTGTTTTGGAGA+AGG | + | chr2.1:25640467-25640486 | MS.gene87008:CDS | 35.0% |
| !!! | TTTTTTTTGTTGGTAGTGGC+CGG | + | chr2.1:25639020-25639039 | MS.gene87008:intron | 35.0% |
| AAACATGGGAAGTCCAAGAA+TGG | + | chr2.1:25636059-25636078 | MS.gene87008:CDS | 40.0% | |
| AAAGAGCCAATTCTACCTCA+TGG | + | chr2.1:25641223-25641242 | MS.gene87008:CDS | 40.0% | |
| AAGAAAGGTGAAGGTTGGAT+TGG | + | chr2.1:25641593-25641612 | MS.gene87008:CDS | 40.0% | |
| AAGGAGGACATTGTTCAAGA+TGG | - | chr2.1:25641367-25641386 | None:intergenic | 40.0% | |
| AAGTCAAGAAATGGGAGAAG+TGG | - | chr2.1:25638182-25638201 | None:intergenic | 40.0% | |
| AAGTGATCAGGAGAGAAACA+TGG | - | chr2.1:25637841-25637860 | None:intergenic | 40.0% | |
| AATTCACAAGGTGCAAGAGT+GGG | + | chr2.1:25640220-25640239 | MS.gene87008:CDS | 40.0% | |
| AGGACATTGTTCAAGATGGT+TGG | - | chr2.1:25641363-25641382 | None:intergenic | 40.0% | |
| AGTCAAGAAATGGGAGAAGT+GGG | - | chr2.1:25638181-25638200 | None:intergenic | 40.0% | |
| ATACACCCTTCTCCAAAACA+AGG | - | chr2.1:25640476-25640495 | None:intergenic | 40.0% | |
| ATAGAGAAGGTAGGCATCAT+AGG | - | chr2.1:25641444-25641463 | None:intergenic | 40.0% | |
| ATCTCACTAAGGAACAAACG+GGG | + | chr2.1:25639348-25639367 | MS.gene87008:intron | 40.0% | |
| ATGAAGGTGATTGTGCGATT+AGG | - | chr2.1:25637509-25637528 | None:intergenic | 40.0% | |
| ATTAGGGCTTTCATTTGAGC+AGG | - | chr2.1:25639537-25639556 | None:intergenic | 40.0% | |
| ATTCTTGGACTTCCCATGTT+TGG | - | chr2.1:25636060-25636079 | None:intergenic | 40.0% | |
| ATTGACGTCACAAGTATCTC+TGG | - | chr2.1:25636590-25636609 | None:intergenic | 40.0% | |
| CAACAAAGAAAGGTGAAGGT+TGG | + | chr2.1:25641588-25641607 | MS.gene87008:CDS | 40.0% | |
| CAACCTTCACCTTTCTTTGT+TGG | - | chr2.1:25641590-25641609 | None:intergenic | 40.0% | |
| CAATTCTACCTCATGGACAT+GGG | + | chr2.1:25641230-25641249 | MS.gene87008:CDS | 40.0% | |
| CAGTGAAATGGACATAAACC+CGG | + | chr2.1:25641316-25641335 | MS.gene87008:CDS | 40.0% | |
| CATAAAATATGCAAGGTCCG+AGG | - | chr2.1:25639054-25639073 | None:intergenic | 40.0% | |
| CATCTCACTAAGGAACAAAC+GGG | + | chr2.1:25639347-25639366 | MS.gene87008:intron | 40.0% | |
| CCAAAGTGGAATCCAAAAAG+AGG | - | chr2.1:25638109-25638128 | None:intergenic | 40.0% | |
| CTTAGATCAGATGCTACTAC+AGG | + | chr2.1:25640731-25640750 | MS.gene87008:CDS | 40.0% | |
| CTTGATATCAAGAAAGGAGG+GGG | + | chr2.1:25641197-25641216 | MS.gene87008:CDS | 40.0% | |
| GAAACCGAAGAAGAAGAACA+AGG | - | chr2.1:25637777-25637796 | None:intergenic | 40.0% | |
| GAGCAGGCGGTTAAAAATTA+GGG | - | chr2.1:25639521-25639540 | None:intergenic | 40.0% | |
| GAGGAAGTTTCTATGGTTCA+TGG | + | chr2.1:25640558-25640577 | MS.gene87008:CDS | 40.0% | |
| GAGGCCAACTTGATATACTT+TGG | + | chr2.1:25639840-25639859 | MS.gene87008:intron | 40.0% | |
| GATCCTGGTATGAAAAGAGA+TGG | + | chr2.1:25635979-25635998 | MS.gene87008:CDS | 40.0% | |
| GCAGTATGAATGATGCAACA+AGG | - | chr2.1:25637067-25637086 | None:intergenic | 40.0% | |
| GGAAGTTGTTGGAAGAACAA+TGG | + | chr2.1:25641251-25641270 | MS.gene87008:CDS | 40.0% | |
| GGACATTGTTCAAGATGGTT+GGG | - | chr2.1:25641362-25641381 | None:intergenic | 40.0% | |
| GGTTCAAGATTCCAAGAAAG+AGG | - | chr2.1:25637596-25637615 | None:intergenic | 40.0% | |
| GTCATGGAATCAATGCAATG+AGG | + | chr2.1:25636020-25636039 | MS.gene87008:CDS | 40.0% | |
| GTCCCTAAAATATCAACGGA+TGG | - | chr2.1:25640951-25640970 | None:intergenic | 40.0% | |
| GTTCAGTCAGATGAGGAAAT+AGG | - | chr2.1:25637447-25637466 | None:intergenic | 40.0% | |
| TAACTGTCCATTCTGCTAGT+TGG | - | chr2.1:25641918-25641937 | None:intergenic | 40.0% | |
| TAAGGATCAGATGGTATCAC+TGG | - | chr2.1:25641500-25641519 | None:intergenic | 40.0% | |
| TAATTCACAAGGTGCAAGAG+TGG | + | chr2.1:25640219-25640238 | MS.gene87008:CDS | 40.0% | |
| TACGGGTATCCAACAAAGAA+AGG | + | chr2.1:25641578-25641597 | MS.gene87008:CDS | 40.0% | |
| TAGAGAAGGTAGGCATCATA+GGG | - | chr2.1:25641443-25641462 | None:intergenic | 40.0% | |
| TCAAAGCAATCAGCCATTCT+TGG | - | chr2.1:25636075-25636094 | None:intergenic | 40.0% | |
| TCAGTTCCCAAGTCAATTGA+TGG | - | chr2.1:25641877-25641896 | None:intergenic | 40.0% | |
| TGAACTTAGCTCAGTTGGTT+GGG | - | chr2.1:25639083-25639102 | None:intergenic | 40.0% | |
| TGAGCAGGCGGTTAAAAATT+AGG | - | chr2.1:25639522-25639541 | None:intergenic | 40.0% | |
| TGATTGTGATGTGTATGCCA+TGG | - | chr2.1:25637620-25637639 | None:intergenic | 40.0% | |
| TGGAATCAATGCAATGAGGT+TGG | + | chr2.1:25636024-25636043 | MS.gene87008:CDS | 40.0% | |
| TTTCAAGATCCATGAGAGTG+TGG | - | chr2.1:25638037-25638056 | None:intergenic | 40.0% | |
| TTTCATACCAGGATCTCCAA+TGG | - | chr2.1:25635974-25635993 | None:intergenic | 40.0% | |
| ! | AAGCCATCTCTTTTCATACC+AGG | - | chr2.1:25635985-25636004 | None:intergenic | 40.0% |
| ! | AAGCCTTCTCTTCCTCTTTT+TGG | + | chr2.1:25638094-25638113 | MS.gene87008:intron | 40.0% |
| ! | ATGAGGTAGAATTGGCTCTT+TGG | - | chr2.1:25641224-25641243 | None:intergenic | 40.0% |
| ! | CCTCTTTTTGGATTCCACTT+TGG | + | chr2.1:25638106-25638125 | MS.gene87008:intron | 40.0% |
| ! | GATTGGTGATCCAAGAACTT+GGG | + | chr2.1:25641610-25641629 | MS.gene87008:CDS | 40.0% |
| ! | TGAGAGTTGCTATTGAGTCA+TGG | + | chr2.1:25636004-25636023 | MS.gene87008:CDS | 40.0% |
| ! | TTATTCAGTGACTTGGGAGA+AGG | + | chr2.1:25640634-25640653 | MS.gene87008:CDS | 40.0% |
| ! | TTTTAGATACTCCAAGGCCA+TGG | + | chr2.1:25640348-25640367 | MS.gene87008:CDS | 40.0% |
| !! | AGGAAGTTGGTAATGGAAGT+TGG | + | chr2.1:25640654-25640673 | MS.gene87008:CDS | 40.0% |
| !! | GGAAAAGAAGCACCAAACAT+GGG | + | chr2.1:25636045-25636064 | MS.gene87008:CDS | 40.0% |
| !! | TGGAAAAGAAGCACCAAACA+TGG | + | chr2.1:25636044-25636063 | MS.gene87008:CDS | 40.0% |
| !!! | GTGAGGTTTTAGATACTCCA+AGG | + | chr2.1:25640342-25640361 | MS.gene87008:CDS | 40.0% |
| !!! | TTTTTTTGTTGGTAGTGGCC+GGG | + | chr2.1:25639021-25639040 | MS.gene87008:intron | 40.0% |
| AACAACTTCCCATGTCCATG+AGG | - | chr2.1:25641241-25641260 | None:intergenic | 45.0% | |
| AAGCTATGCTTGAAACCCCA+TGG | + | chr2.1:25638334-25638353 | MS.gene87008:intron | 45.0% | |
| ACACTGGCCATCAATTGACT+TGG | + | chr2.1:25641867-25641886 | MS.gene87008:CDS | 45.0% | |
| ACATCAAGCTCCCAAGTTCT+TGG | - | chr2.1:25641623-25641642 | None:intergenic | 45.0% | |
| AGAACTTGGGAGCTTGATGT+TGG | + | chr2.1:25641623-25641642 | MS.gene87008:CDS | 45.0% | |
| AGAGAAACATGGAGATGGAG+GGG | - | chr2.1:25637830-25637849 | None:intergenic | 45.0% | |
| AGAGAAGGTAGGCATCATAG+GGG | - | chr2.1:25641442-25641461 | None:intergenic | 45.0% | |
| AGCGTTTGTTCAGTCAGATG+AGG | - | chr2.1:25637454-25637473 | None:intergenic | 45.0% | |
| AGTCCTCGTACATATGAGAG+CGG | + | chr2.1:25636546-25636565 | MS.gene87008:intron | 45.0% | |
| ATAGGGGAACTTAGCTGCAT+CGG | - | chr2.1:25641426-25641445 | None:intergenic | 45.0% | |
| ATATCAGCCATTGGAGATCC+TGG | + | chr2.1:25635964-25635983 | MS.gene87008:CDS | 45.0% | |
| ATCCAAAATTGCCATGGCCT+TGG | - | chr2.1:25640362-25640381 | None:intergenic | 45.0% | |
| ATGCAGACATGTATGCACCT+TGG | + | chr2.1:25640294-25640313 | MS.gene87008:CDS | 45.0% | |
| CAACAAGGCACACATGGTAA+TGG | - | chr2.1:25638280-25638299 | None:intergenic | 45.0% | |
| CAAGAGTGGGAGAACAAGTT+AGG | + | chr2.1:25640233-25640252 | MS.gene87008:CDS | 45.0% | |
| CCAATTCTACCTCATGGACA+TGG | + | chr2.1:25641229-25641248 | MS.gene87008:CDS | 45.0% | |
| CCATGTCCATGAGGTAGAAT+TGG | - | chr2.1:25641232-25641251 | None:intergenic | 45.0% | |
| CGGATTTGTAAGCACGAGTA+AGG | + | chr2.1:25639745-25639764 | MS.gene87008:intron | 45.0% | |
| CTACTCACTCGCACTTAAAG+AGG | + | chr2.1:25636712-25636731 | MS.gene87008:intron | 45.0% | |
| CTTCGTGAACTTAGCTCAGT+TGG | - | chr2.1:25639088-25639107 | None:intergenic | 45.0% | |
| CTTGGAATCTTGAACCTCCA+TGG | + | chr2.1:25637600-25637619 | MS.gene87008:intron | 45.0% | |
| GAGAGAAACATGGAGATGGA+GGG | - | chr2.1:25637831-25637850 | None:intergenic | 45.0% | |
| GATGCTACTACAGGATTCTC+TGG | + | chr2.1:25640740-25640759 | MS.gene87008:CDS | 45.0% | |
| GGGTTGCTATAAGGATCAGA+TGG | - | chr2.1:25641509-25641528 | None:intergenic | 45.0% | |
| GTGAACTTAGCTCAGTTGGT+TGG | - | chr2.1:25639084-25639103 | None:intergenic | 45.0% | |
| GTGATAGAACCCCTCTTTCT+TGG | + | chr2.1:25637582-25637601 | MS.gene87008:intron | 45.0% | |
| GTGCAAGCATGTTCTATCAG+TGG | - | chr2.1:25638383-25638402 | None:intergenic | 45.0% | |
| TCAGGAGAGAAACATGGAGA+TGG | - | chr2.1:25637835-25637854 | None:intergenic | 45.0% | |
| TCATGGACATGGGAAGTTGT+TGG | + | chr2.1:25641240-25641259 | MS.gene87008:CDS | 45.0% | |
| TCCAAGTACATCGCATTTCC+TGG | - | chr2.1:25641473-25641492 | None:intergenic | 45.0% | |
| TCCAGGAAATGCGATGTACT+TGG | + | chr2.1:25641469-25641488 | MS.gene87008:CDS | 45.0% | |
| TCCTGCGAGAAATCCATGAA+AGG | - | chr2.1:25638075-25638094 | None:intergenic | 45.0% | |
| TCCTTTCATGGATTTCTCGC+AGG | + | chr2.1:25638071-25638090 | MS.gene87008:intron | 45.0% | |
| TGATGCAACAAGGCTTGAGA+AGG | - | chr2.1:25637057-25637076 | None:intergenic | 45.0% | |
| TTGTGATGTGTATGCCATGG+AGG | - | chr2.1:25637617-25637636 | None:intergenic | 45.0% | |
| ! | ATCCATGAGAGTGTGGATGA+AGG | - | chr2.1:25638030-25638049 | None:intergenic | 45.0% |
| ! | CACTGGCCATCAATTGACTT+GGG | + | chr2.1:25641868-25641887 | MS.gene87008:CDS | 45.0% |
| ! | CCAAAAGTGCAAATAAGGCG+TGG | - | chr2.1:25637920-25637939 | None:intergenic | 45.0% |
| ! | GGATTGGTGATCCAAGAACT+TGG | + | chr2.1:25641609-25641628 | MS.gene87008:CDS | 45.0% |
| ! | TCCATGAGAGTGTGGATGAA+GGG | - | chr2.1:25638029-25638048 | None:intergenic | 45.0% |
| !! | GGACGTTCAAGTGGATTACA+CGG | - | chr2.1:25637488-25637507 | None:intergenic | 45.0% |
| !! | GGTTTTAACCCTGACGTCAT+TGG | - | chr2.1:25638941-25638960 | None:intergenic | 45.0% |
| !! | TGGGAGAAGGAAGTTGGTAA+TGG | + | chr2.1:25640647-25640666 | MS.gene87008:CDS | 45.0% |
| !!! | CCACGCCTTATTTGCACTTT+TGG | + | chr2.1:25637917-25637936 | MS.gene87008:intron | 45.0% |
| !!! | TTTTTTGTTGGTAGTGGCCG+GGG | + | chr2.1:25639022-25639041 | MS.gene87008:intron | 45.0% |
| !! | TAAATATCAATTATAATAAT+AGG | + | chr2.1:25639434-25639453 | MS.gene87008:intron | 5.0% |
| !!! | AAATATATAGTTTTTAATTT+TGG | + | chr2.1:25636133-25636152 | MS.gene87008:intron | 5.0% |
| !!! | TAAAAACTATATATTTTAAA+TGG | - | chr2.1:25636129-25636148 | None:intergenic | 5.0% |
| !!! | TTAATTTTTTTTTTTTTTTG+AGG | + | chr2.1:25638835-25638854 | MS.gene87008:intron | 5.0% |
| AAACCGGGTGCGGCAAAATT+TGG | - | chr2.1:25641550-25641569 | None:intergenic | 50.0% | |
| AACAATGGAAAGCCGTGCGA+CGG | + | chr2.1:25641266-25641285 | MS.gene87008:CDS | 50.0% | |
| AATGGGAGAAGTGGGTAGTG+AGG | - | chr2.1:25638173-25638192 | None:intergenic | 50.0% | |
| ACCTAGCAACAAGGCACACA+TGG | - | chr2.1:25638286-25638305 | None:intergenic | 50.0% | |
| AGATGGTTGGGTTTGCACGA+CGG | - | chr2.1:25641350-25641369 | None:intergenic | 50.0% | |
| AGGGCTTTCATTTGAGCAGG+CGG | - | chr2.1:25639534-25639553 | None:intergenic | 50.0% | |
| ATCAGTGGTATCAGAGCCTC+TGG | - | chr2.1:25638368-25638387 | None:intergenic | 50.0% | |
| CATCCGCTCTCATATGTACG+AGG | - | chr2.1:25636552-25636571 | None:intergenic | 50.0% | |
| CCTAGATGCCAATGACGTCA+GGG | + | chr2.1:25638930-25638949 | MS.gene87008:intron | 50.0% | |
| GCTACTACAGGATTCTCTGG+TGG | + | chr2.1:25640743-25640762 | MS.gene87008:CDS | 50.0% | |
| GGAGAGAAACATGGAGATGG+AGG | - | chr2.1:25637832-25637851 | None:intergenic | 50.0% | |
| GGGACTGAGTTAGCACAAGA+AGG | - | chr2.1:25637426-25637445 | None:intergenic | 50.0% | |
| GTGCGATTAGGACGTTCAAG+TGG | - | chr2.1:25637497-25637516 | None:intergenic | 50.0% | |
| TACCTTCTCTATCGTGCTCC+AGG | + | chr2.1:25641452-25641471 | MS.gene87008:CDS | 50.0% | |
| TCAGCTCGTACACATGAGAG+CGG | + | chr2.1:25636344-25636363 | MS.gene87008:intron | 50.0% | |
| TCCCTTCATCCACACTCTCA+TGG | + | chr2.1:25638025-25638044 | MS.gene87008:intron | 50.0% | |
| TCCTAGATGCCAATGACGTC+AGG | + | chr2.1:25638929-25638948 | MS.gene87008:intron | 50.0% | |
| TGGAGCACGATAGAGAAGGT+AGG | - | chr2.1:25641453-25641472 | None:intergenic | 50.0% | |
| TTCCTGGAGCACGATAGAGA+AGG | - | chr2.1:25641457-25641476 | None:intergenic | 50.0% | |
| ! | AAATTTTGCCGCACCCGGTT+TGG | + | chr2.1:25641549-25641568 | MS.gene87008:CDS | 50.0% |
| ! | AATTTTGCCGCACCCGGTTT+GGG | + | chr2.1:25641550-25641569 | MS.gene87008:CDS | 50.0% |
| ! | ACCATGTGTGCCTTGTTGCT+AGG | + | chr2.1:25638282-25638301 | MS.gene87008:intron | 50.0% |
| ! | ACTCCAAATTTTGCCGCACC+CGG | + | chr2.1:25641544-25641563 | MS.gene87008:CDS | 50.0% |
| ! | AGCCTCTGGTTCATGATCCA+TGG | - | chr2.1:25638354-25638373 | None:intergenic | 50.0% |
| ! | CCTCTGGTTCATGATCCATG+GGG | - | chr2.1:25638352-25638371 | None:intergenic | 50.0% |
| ! | CTCCAAGGCCATGGCAATTT+TGG | + | chr2.1:25640357-25640376 | MS.gene87008:CDS | 50.0% |
| ! | GCCTCTGGTTCATGATCCAT+GGG | - | chr2.1:25638353-25638372 | None:intergenic | 50.0% |
| ! | GTGACTTGGGAGAAGGAAGT+TGG | + | chr2.1:25640641-25640660 | MS.gene87008:CDS | 50.0% |
| ! | TGGAGTATCTCTTGAGGCTG+CGG | - | chr2.1:25641530-25641549 | None:intergenic | 50.0% |
| !! | AACTCGGGTGCCATTTGAGA+AGG | - | chr2.1:25641396-25641415 | None:intergenic | 50.0% |
| !! | CTGCATCGGTTCGATGAACT+CGG | - | chr2.1:25641412-25641431 | None:intergenic | 50.0% |
| !! | TGCATCGGTTCGATGAACTC+GGG | - | chr2.1:25641411-25641430 | None:intergenic | 50.0% |
| AAGGCGTGGAAAGCTCAACG+AGG | - | chr2.1:25637906-25637925 | None:intergenic | 55.0% | |
| AAGGTCCGAGGTTCAAACCC+CGG | - | chr2.1:25639042-25639061 | None:intergenic | 55.0% | |
| ACAATGGAAAGCCGTGCGAC+GGG | + | chr2.1:25641267-25641286 | MS.gene87008:CDS | 55.0% | |
| CCCCATGGATCATGAACCAG+AGG | + | chr2.1:25638349-25638368 | MS.gene87008:intron | 55.0% | |
| CCCTGACGTCATTGGCATCT+AGG | - | chr2.1:25638933-25638952 | None:intergenic | 55.0% | |
| CTCTCCACAGGTTCAGTACG+TGG | - | chr2.1:25641847-25641866 | None:intergenic | 55.0% | |
| CTGAACCTGTGGAGAGACAC+TGG | + | chr2.1:25641851-25641870 | MS.gene87008:CDS | 55.0% | |
| GGATCCACGTACTGAACCTG+TGG | + | chr2.1:25641840-25641859 | MS.gene87008:intron | 55.0% | |
| GTGGTGGCCAACTAGCAGAA+TGG | + | chr2.1:25641908-25641927 | MS.gene87008:CDS | 55.0% | |
| TACCCGTATTCGCCCCAAAC+CGG | - | chr2.1:25641566-25641585 | None:intergenic | 55.0% | |
| TTGCACGACGGTTCAGCTTC+CGG | - | chr2.1:25641338-25641357 | None:intergenic | 55.0% | |
| ! | GGAGTATCTCTTGAGGCTGC+GGG | - | chr2.1:25641529-25641548 | None:intergenic | 55.0% |
| ! | TGAGGCTGCGGGTTGCTATA+AGG | - | chr2.1:25641518-25641537 | None:intergenic | 55.0% |
| !! | ATTTTGCCGCACCCGGTTTG+GGG | + | chr2.1:25641551-25641570 | MS.gene87008:CDS | 55.0% |
| ACCCGTATTCGCCCCAAACC+GGG | - | chr2.1:25641565-25641584 | None:intergenic | 60.0% | |
| AGTGGCCGGGGTTTGAACCT+CGG | + | chr2.1:25639034-25639053 | MS.gene87008:intron | 60.0% | |
| CAATGGAAAGCCGTGCGACG+GGG | + | chr2.1:25641268-25641287 | MS.gene87008:CDS | 60.0% | |
| GATGGCCAGTGTCTCTCCAC+AGG | - | chr2.1:25641859-25641878 | None:intergenic | 60.0% | |
| GATGTGACATCCCCGTCGCA+CGG | - | chr2.1:25641281-25641300 | None:intergenic | 60.0% | |
| TATTCGCCCCAAACCGGGTG+CGG | - | chr2.1:25641560-25641579 | None:intergenic | 60.0% | |
| TGCACGACGGTTCAGCTTCC+GGG | - | chr2.1:25641337-25641356 | None:intergenic | 60.0% | |
| !! | ACCCGGTTTGGGGCGAATAC+GGG | + | chr2.1:25641561-25641580 | MS.gene87008:CDS | 60.0% |
| !! | CACCCGGTTTGGGGCGAATA+CGG | + | chr2.1:25641560-25641579 | MS.gene87008:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 25635865 | 25642032 | 25635865 | ID=MS.gene87008 |
| chr2.1 | mRNA | 25635865 | 25642032 | 25635865 | ID=MS.gene87008.t1;Parent=MS.gene87008 |
| chr2.1 | exon | 25635865 | 25636117 | 25635865 | ID=MS.gene87008.t1.exon1;Parent=MS.gene87008.t1 |
| chr2.1 | CDS | 25635865 | 25636117 | 25635865 | ID=cds.MS.gene87008.t1;Parent=MS.gene87008.t1 |
| chr2.1 | exon | 25640207 | 25640799 | 25640207 | ID=MS.gene87008.t1.exon2;Parent=MS.gene87008.t1 |
| chr2.1 | CDS | 25640207 | 25640799 | 25640207 | ID=cds.MS.gene87008.t1;Parent=MS.gene87008.t1 |
| chr2.1 | exon | 25641161 | 25641676 | 25641161 | ID=MS.gene87008.t1.exon3;Parent=MS.gene87008.t1 |
| chr2.1 | CDS | 25641161 | 25641676 | 25641161 | ID=cds.MS.gene87008.t1;Parent=MS.gene87008.t1 |
| chr2.1 | exon | 25641841 | 25641933 | 25641841 | ID=MS.gene87008.t1.exon4;Parent=MS.gene87008.t1 |
| chr2.1 | CDS | 25641841 | 25641933 | 25641841 | ID=cds.MS.gene87008.t1;Parent=MS.gene87008.t1 |
| chr2.1 | exon | 25642009 | 25642032 | 25642009 | ID=MS.gene87008.t1.exon5;Parent=MS.gene87008.t1 |
| chr2.1 | CDS | 25642009 | 25642032 | 25642009 | ID=cds.MS.gene87008.t1;Parent=MS.gene87008.t1 |
| Gene Sequence |
| Protein sequence |