Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20903.t1 | XP_003591315.1 | 97 | 496 | 15 | 0 | 1 | 496 | 1 | 496 | 2.40E-301 | 1043.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20903.t1 | G7IBR5 | 97.0 | 496 | 15 | 0 | 1 | 496 | 1 | 496 | 1.7e-301 | 1043.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene20903 | 0.842336 | 2.75E-58 | -1.69E-46 |
| MS.gene049190 | MS.gene20903 | 0.806767 | 7.01E-50 | -1.69E-46 |
| MS.gene049227 | MS.gene20903 | 0.805069 | 1.60E-49 | -1.69E-46 |
| MS.gene049341 | MS.gene20903 | 0.806886 | 6.62E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene20903 | 0.826031 | 3.39E-54 | -1.69E-46 |
| MS.gene049418 | MS.gene20903 | 0.812392 | 4.34E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene20903 | 0.809694 | 1.67E-50 | -1.69E-46 |
| MS.gene049698 | MS.gene20903 | 0.814728 | 1.33E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene20903 | 0.844469 | 7.41E-59 | -1.69E-46 |
| MS.gene049807 | MS.gene20903 | 0.836748 | 7.80E-57 | -1.69E-46 |
| MS.gene049850 | MS.gene20903 | 0.81138 | 7.21E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene20903 | 0.855693 | 5.31E-62 | -1.69E-46 |
| MS.gene05045 | MS.gene20903 | 0.813729 | 2.21E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene20903 | 0.831226 | 1.88E-55 | -1.69E-46 |
| MS.gene050807 | MS.gene20903 | 0.833959 | 3.95E-56 | -1.69E-46 |
| MS.gene050808 | MS.gene20903 | 0.811114 | 8.23E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene20903 | 0.856822 | 2.48E-62 | -1.69E-46 |
| MS.gene050901 | MS.gene20903 | 0.841051 | 6.01E-58 | -1.69E-46 |
| MS.gene051018 | MS.gene20903 | 0.828403 | 9.17E-55 | -1.69E-46 |
| MS.gene051021 | MS.gene20903 | 0.820483 | 6.70E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene20903 | 0.810633 | 1.05E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene20903 | 0.828492 | 8.73E-55 | -1.69E-46 |
| MS.gene051328 | MS.gene20903 | 0.826933 | 2.07E-54 | -1.69E-46 |
| MS.gene051388 | MS.gene20903 | 0.809437 | 1.89E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene20903 | 0.80295 | 4.40E-49 | -1.69E-46 |
| MS.gene05150 | MS.gene20903 | 0.805982 | 1.03E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene20903 | 0.850188 | 2.00E-60 | -1.69E-46 |
| MS.gene051700 | MS.gene20903 | 0.815607 | 8.48E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene20903 | 0.867977 | 9.19E-66 | -1.69E-46 |
| MS.gene051720 | MS.gene20903 | 0.865623 | 5.16E-65 | -1.69E-46 |
| MS.gene051744 | MS.gene20903 | 0.812249 | 4.66E-51 | -1.69E-46 |
| MS.gene051850 | MS.gene20903 | 0.801892 | 7.27E-49 | -1.69E-46 |
| MS.gene051885 | MS.gene20903 | 0.852 | 6.15E-61 | -1.69E-46 |
| MS.gene052020 | MS.gene20903 | 0.805307 | 1.42E-49 | -1.69E-46 |
| MS.gene052133 | MS.gene20903 | 0.859874 | 3.06E-63 | -1.69E-46 |
| MS.gene052307 | MS.gene20903 | 0.801411 | 9.12E-49 | -1.69E-46 |
| MS.gene052335 | MS.gene20903 | 0.835143 | 1.99E-56 | -1.69E-46 |
| MS.gene052514 | MS.gene20903 | 0.802186 | 6.32E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene20903 | 0.854704 | 1.03E-61 | -1.69E-46 |
| MS.gene052609 | MS.gene20903 | 0.811916 | 5.51E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene20903 | 0.819244 | 1.29E-52 | -1.69E-46 |
| MS.gene052732 | MS.gene20903 | 0.887896 | 9.54E-73 | -1.69E-46 |
| MS.gene052947 | MS.gene20903 | 0.823125 | 1.64E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene20903 | 0.809996 | 1.44E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene20903 | 0.831829 | 1.34E-55 | -1.69E-46 |
| MS.gene053144 | MS.gene20903 | 0.912914 | 1.13E-83 | -1.69E-46 |
| MS.gene053164 | MS.gene20903 | 0.801972 | 7.00E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene20903 | 0.839357 | 1.66E-57 | -1.69E-46 |
| MS.gene053174 | MS.gene20903 | 0.841423 | 4.80E-58 | -1.69E-46 |
| MS.gene053226 | MS.gene20903 | 0.817804 | 2.73E-52 | -1.69E-46 |
| MS.gene053536 | MS.gene20903 | 0.831289 | 1.82E-55 | -1.69E-46 |
| MS.gene053538 | MS.gene20903 | 0.829242 | 5.74E-55 | -1.69E-46 |
| MS.gene053581 | MS.gene20903 | 0.897745 | 1.04E-76 | -1.69E-46 |
| MS.gene054550 | MS.gene20903 | 0.835726 | 1.42E-56 | -1.69E-46 |
| MS.gene054554 | MS.gene20903 | 0.815892 | 7.32E-52 | -1.69E-46 |
| MS.gene054584 | MS.gene20903 | 0.902163 | 1.28E-78 | -1.69E-46 |
| MS.gene055144 | MS.gene20903 | 0.852007 | 6.12E-61 | -1.69E-46 |
| MS.gene055465 | MS.gene20903 | 0.862439 | 5.06E-64 | -1.69E-46 |
| MS.gene055466 | MS.gene20903 | 0.865674 | 4.97E-65 | -1.69E-46 |
| MS.gene055468 | MS.gene20903 | 0.878253 | 3.26E-69 | -1.69E-46 |
| MS.gene055469 | MS.gene20903 | 0.856062 | 4.15E-62 | -1.69E-46 |
| MS.gene055512 | MS.gene20903 | 0.823621 | 1.25E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene20903 | 0.811933 | 5.46E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene20903 | 0.884627 | 1.63E-71 | -1.69E-46 |
| MS.gene055580 | MS.gene20903 | -0.881019 | 3.40E-70 | -1.69E-46 |
| MS.gene055764 | MS.gene20903 | 0.846319 | 2.34E-59 | -1.69E-46 |
| MS.gene055890 | MS.gene20903 | 0.838183 | 3.34E-57 | -1.69E-46 |
| MS.gene055891 | MS.gene20903 | 0.851181 | 1.05E-60 | -1.69E-46 |
| MS.gene056005 | MS.gene20903 | 0.802749 | 4.84E-49 | -1.69E-46 |
| MS.gene056043 | MS.gene20903 | -0.875952 | 2.05E-68 | -1.69E-46 |
| MS.gene056075 | MS.gene20903 | 0.815112 | 1.09E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene20903 | 0.839536 | 1.49E-57 | -1.69E-46 |
| MS.gene056368 | MS.gene20903 | 0.813601 | 2.36E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene20903 | 0.804041 | 2.61E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene20903 | 0.820492 | 6.67E-53 | -1.69E-46 |
| MS.gene057294 | MS.gene20903 | 0.815867 | 7.42E-52 | -1.69E-46 |
| MS.gene057705 | MS.gene20903 | 0.803294 | 3.73E-49 | -1.69E-46 |
| MS.gene058339 | MS.gene20903 | 0.852003 | 6.14E-61 | -1.69E-46 |
| MS.gene058360 | MS.gene20903 | 0.805988 | 1.02E-49 | -1.69E-46 |
| MS.gene058649 | MS.gene20903 | 0.809234 | 2.09E-50 | -1.69E-46 |
| MS.gene058852 | MS.gene20903 | 0.852915 | 3.37E-61 | -1.69E-46 |
| MS.gene058906 | MS.gene20903 | 0.80445 | 2.15E-49 | -1.69E-46 |
| MS.gene058909 | MS.gene20903 | 0.818738 | 1.68E-52 | -1.69E-46 |
| MS.gene058912 | MS.gene20903 | 0.818727 | 1.69E-52 | -1.69E-46 |
| MS.gene058945 | MS.gene20903 | 0.86055 | 1.91E-63 | -1.69E-46 |
| MS.gene05894 | MS.gene20903 | 0.826755 | 2.28E-54 | -1.69E-46 |
| MS.gene059171 | MS.gene20903 | 0.84068 | 7.51E-58 | -1.69E-46 |
| MS.gene059227 | MS.gene20903 | 0.815587 | 8.57E-52 | -1.69E-46 |
| MS.gene059424 | MS.gene20903 | 0.818328 | 2.08E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene20903 | 0.802268 | 6.08E-49 | -1.69E-46 |
| MS.gene059937 | MS.gene20903 | 0.828192 | 1.03E-54 | -1.69E-46 |
| MS.gene06001 | MS.gene20903 | 0.80725 | 5.54E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene20903 | 0.817942 | 2.54E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene20903 | 0.825223 | 5.27E-54 | -1.69E-46 |
| MS.gene060519 | MS.gene20903 | 0.83882 | 2.29E-57 | -1.69E-46 |
| MS.gene060587 | MS.gene20903 | 0.857106 | 2.05E-62 | -1.69E-46 |
| MS.gene060603 | MS.gene20903 | 0.811654 | 6.28E-51 | -1.69E-46 |
| MS.gene060884 | MS.gene20903 | 0.852984 | 3.22E-61 | -1.69E-46 |
| MS.gene060886 | MS.gene20903 | 0.854869 | 9.23E-62 | -1.69E-46 |
| MS.gene060888 | MS.gene20903 | 0.800394 | 1.47E-48 | -1.69E-46 |
| MS.gene061006 | MS.gene20903 | 0.822694 | 2.06E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene20903 | 0.824127 | 9.55E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20903 | MS.gene000228 | PPI |
| MS.gene20903 | MS.gene87008 | PPI |
| MS.gene96009 | MS.gene20903 | PPI |
| MS.gene039307 | MS.gene20903 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20903.t1 | MTR_1g086170 | 96.976 | 496 | 15 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1009 |
| MS.gene20903.t1 | MTR_2g072850 | 58.937 | 414 | 161 | 5 | 80 | 487 | 3 | 413 | 4.43e-179 | 509 |
| MS.gene20903.t1 | MTR_2g072880 | 57.576 | 66 | 28 | 0 | 15 | 80 | 19 | 84 | 4.71e-20 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20903.t1 | AT2G47010 | 65.545 | 505 | 140 | 9 | 3 | 486 | 2 | 493 | 0.0 | 682 |
| MS.gene20903.t1 | AT2G47010 | 65.545 | 505 | 140 | 9 | 3 | 486 | 2 | 493 | 0.0 | 682 |
| MS.gene20903.t1 | AT2G47010 | 65.733 | 464 | 126 | 8 | 3 | 445 | 2 | 453 | 0.0 | 625 |
| MS.gene20903.t1 | AT1G17030 | 57.540 | 504 | 188 | 9 | 1 | 485 | 1 | 497 | 0.0 | 590 |
| MS.gene20903.t1 | AT4G09965 | 62.162 | 74 | 26 | 2 | 417 | 489 | 147 | 219 | 2.84e-26 | 107 |
Find 108 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCAAGGCCATGGCAATTT+TGG | 0.120315 | 1.3:+61070830 | MS.gene20903:CDS |
| CTACACCAAGCTGGAGTTTC+TGG | 0.122724 | 1.3:-61071944 | None:intergenic |
| GTTAACCTCACCTTAAAATT+TGG | 0.172698 | 1.3:-61071782 | None:intergenic |
| GTTCAAAAGGAACTGTATTT+AGG | 0.209727 | 1.3:+61070784 | MS.gene20903:CDS |
| CCAGGAAGGTTTCCTTGTTT+TGG | 0.219496 | 1.3:+61070934 | MS.gene20903:CDS |
| TCTATGTTGTTTATGTCTTC+TGG | 0.226246 | 1.3:-61070751 | None:intergenic |
| AGACCATCTCTTTGCATTCC+TGG | 0.226808 | 1.3:-61070350 | None:intergenic |
| GGAAACCTTCCTGGTTTAAA+AGG | 0.250546 | 1.3:-61070925 | None:intergenic |
| TCCTCCTTTCTTGACATCTA+AGG | 0.253365 | 1.3:-61071804 | None:intergenic |
| TAATAGTGATAAGCTGAATA+AGG | 0.272753 | 1.3:-61072049 | None:intergenic |
| AGTTATTGCCTCATCCTATT+TGG | 0.288586 | 1.3:+61072158 | MS.gene20903:CDS |
| CTTCTCCTGCGAAAAGAATA+TGG | 0.292504 | 1.3:+61072566 | MS.gene20903:CDS |
| ATTTAATGGTACTTATGATT+TGG | 0.292790 | 1.3:+61071029 | MS.gene20903:CDS |
| TATGTCCTCAAGATGGTAAA+AGG | 0.317835 | 1.3:+61070896 | MS.gene20903:CDS |
| CCAAAACAAGGAAACCTTCC+TGG | 0.324704 | 1.3:-61070934 | None:intergenic |
| CATCCTATTTGGAGTGAGTA+TGG | 0.325483 | 1.3:+61072169 | MS.gene20903:CDS |
| TGGTGTAGCCCTACAGGTTT+AGG | 0.336158 | 1.3:+61071959 | MS.gene20903:CDS |
| TGTGCTTGAGGATTACTATA+AGG | 0.345328 | 1.3:-61072124 | None:intergenic |
| GTAATGAGAGGAGGATTTAA+TGG | 0.352289 | 1.3:+61071015 | MS.gene20903:CDS |
| GACCATCTCTTTGCATTCCT+GGG | 0.357904 | 1.3:-61070349 | None:intergenic |
| GCATTCCCCTTGTGTCATAA+TGG | 0.362536 | 1.3:-61071236 | None:intergenic |
| ATAAGCTGAATAAGGGAAAT+TGG | 0.363013 | 1.3:-61072041 | None:intergenic |
| TTGAGAGCTGATACAGTTAG+TGG | 0.369320 | 1.3:+61071198 | MS.gene20903:CDS |
| AAGTAGACTTTACTTCTATC+AGG | 0.372180 | 1.3:+61072264 | MS.gene20903:CDS |
| TAACCATACTCACTCCAAAT+AGG | 0.374128 | 1.3:-61072172 | None:intergenic |
| TTTGATGACTAATGTTTGTT+AGG | 0.384250 | 1.3:+61072693 | MS.gene20903:CDS |
| TCAAAACATTCAGCTGCTCT+TGG | 0.404310 | 1.3:-61070440 | None:intergenic |
| GGGTTGGTGATGCAAGGACT+TGG | 0.408731 | 1.3:+61072218 | MS.gene20903:CDS |
| GATTCTAGTTGTAGAGATAG+TGG | 0.419018 | 1.3:+61071051 | MS.gene20903:CDS |
| CCAGCTTGGTGTAGCCCTAC+AGG | 0.419351 | 1.3:+61071953 | MS.gene20903:CDS |
| ATCCAAAATTGCCATGGCCT+TGG | 0.420714 | 1.3:-61070832 | None:intergenic |
| TAAGAGTAGCCTTCGAAGCT+TGG | 0.430314 | 1.3:+61070372 | MS.gene20903:CDS |
| ATATGGACATCTATTGATAC+TGG | 0.433471 | 1.3:+61072583 | MS.gene20903:CDS |
| GGGAGAAGAAAGTTAATGTT+GGG | 0.436644 | 1.3:+61071115 | MS.gene20903:CDS |
| TAAGGATCACAAGTACTAAC+AGG | 0.438806 | 1.3:-61072106 | None:intergenic |
| AACAACTTCCCATGTCTAGA+AGG | 0.439967 | 1.3:-61071847 | None:intergenic |
| GGAAATTATGACACTAGGTC+TGG | 0.453514 | 1.3:+61070871 | MS.gene20903:CDS |
| TTCTAGACATGGGAAGTTGT+TGG | 0.455499 | 1.3:+61071849 | MS.gene20903:CDS |
| TGTCCATTGATGACAGAAGA+TGG | 0.460144 | 1.3:-61070977 | None:intergenic |
| AATAGTGATAAGCTGAATAA+GGG | 0.461907 | 1.3:-61072048 | None:intergenic |
| TGGGAGAAGAAAGTTAATGT+TGG | 0.466322 | 1.3:+61071114 | MS.gene20903:CDS |
| GTCTCCTACAGCTGAGACAT+TGG | 0.469452 | 1.3:-61070327 | None:intergenic |
| AGACTTCAAAGAAATATCCT+TGG | 0.482604 | 1.3:+61071163 | MS.gene20903:CDS |
| AGATCTTTATGCTGTTCAAA+AGG | 0.483494 | 1.3:+61070771 | MS.gene20903:CDS |
| GATACAGTTAGTGGATTCTC+TGG | 0.484218 | 1.3:+61071207 | MS.gene20903:CDS |
| AGAAAGTTAATGTTGGGAGT+TGG | 0.491514 | 1.3:+61071121 | MS.gene20903:CDS |
| TAGAAGGTAGAATTGACTCT+TGG | 0.493404 | 1.3:-61071831 | None:intergenic |
| CAAAACATTCAGCTGCTCTT+GGG | 0.494665 | 1.3:-61070439 | None:intergenic |
| TGAACTATCTCTTGTGCTTG+AGG | 0.503738 | 1.3:-61072136 | None:intergenic |
| AACCCATCTTCTGTCATCAA+TGG | 0.504979 | 1.3:+61070974 | MS.gene20903:CDS |
| ATGGTTGGGTTGGTGATGCA+AGG | 0.505505 | 1.3:+61072212 | MS.gene20903:CDS |
| ATGTCTTCTGGTCTCAGACC+AGG | 0.512031 | 1.3:-61070739 | None:intergenic |
| TATCACTATTACTGTGCTCC+AGG | 0.516398 | 1.3:+61072061 | MS.gene20903:CDS |
| TTAAAATTTGGTGACTCAAG+AGG | 0.526844 | 1.3:-61071770 | None:intergenic |
| TCATCTGGTGTGATATGAAA+TGG | 0.531286 | 1.3:-61071992 | None:intergenic |
| CTGTCATCAATGGACAAAGC+TGG | 0.533115 | 1.3:+61070984 | MS.gene20903:CDS |
| ATGTCCTCAAGATGGTAAAA+GGG | 0.535714 | 1.3:+61070897 | MS.gene20903:CDS |
| CCTGTAGGGCTACACCAAGC+TGG | 0.537936 | 1.3:-61071953 | None:intergenic |
| CAGACCAATGTCTCAGCTGT+AGG | 0.540258 | 1.3:+61070323 | MS.gene20903:CDS |
| ACTTGGGAACTTGATGTTGG+TGG | 0.540896 | 1.3:+61072235 | MS.gene20903:CDS |
| TCTAAATGTTGAGCATTGCC+TGG | 0.545866 | 1.3:-61072079 | None:intergenic |
| GGTTGGTGATGCAAGGACTT+GGG | 0.546921 | 1.3:+61072219 | MS.gene20903:CDS |
| AACAATGGTGCACCTTGTGA+TGG | 0.559983 | 1.3:+61071875 | MS.gene20903:CDS |
| AGAAGTAAAGTCTACTTGCT+AGG | 0.561259 | 1.3:-61072258 | None:intergenic |
| GGACAATTGCCTAAACCTGT+AGG | 0.561583 | 1.3:-61071968 | None:intergenic |
| GTCTCAGCTGTAGGAGACCC+AGG | 0.562074 | 1.3:+61070332 | MS.gene20903:CDS |
| AACCTTCCTGGTTTAAAAGG+AGG | 0.568580 | 1.3:-61070922 | None:intergenic |
| GACAATTGCCTAAACCTGTA+GGG | 0.570433 | 1.3:-61071967 | None:intergenic |
| AAAGTTAACAAACTTGGTGT+AGG | 0.571771 | 1.3:+61070706 | MS.gene20903:CDS |
| GTCCATTGATGACAGAAGAT+GGG | 0.572666 | 1.3:-61070976 | None:intergenic |
| TTAACCTTAGATGTCAAGAA+AGG | 0.573621 | 1.3:+61071800 | MS.gene20903:CDS |
| TGGTCAAGAAGCTCCTCACA+TGG | 0.581869 | 1.3:+61070412 | MS.gene20903:CDS |
| TTAGATGTCAAGAAAGGAGG+AGG | 0.583402 | 1.3:+61071806 | MS.gene20903:CDS |
| ATTGATGACAGAAGATGGGT+TGG | 0.585027 | 1.3:-61070972 | None:intergenic |
| TCAATTCTACCTTCTAGACA+TGG | 0.588399 | 1.3:+61071838 | MS.gene20903:CDS |
| GCTCTTGGGCTACCCATGTG+AGG | 0.591146 | 1.3:-61070425 | None:intergenic |
| AGGACTTGGGAACTTGATGT+TGG | 0.596427 | 1.3:+61072232 | MS.gene20903:CDS |
| GACCCAGGAATGCAAAGAGA+TGG | 0.596905 | 1.3:+61070347 | MS.gene20903:CDS |
| TTAAAGACACACCAAGGCCA+TGG | 0.597630 | 1.3:+61070821 | MS.gene20903:CDS |
| CTGGAAGGTGATGTAATGAG+AGG | 0.599493 | 1.3:+61071003 | MS.gene20903:CDS |
| ATGCATCCTGTTCCAAAACA+AGG | 0.602446 | 1.3:-61070946 | None:intergenic |
| TACTCACTCCAAATAGGATG+AGG | 0.606279 | 1.3:-61072166 | None:intergenic |
| AAAATGGAAATTATGACACT+AGG | 0.613148 | 1.3:+61070866 | MS.gene20903:CDS |
| TCAATCCAGAAACTCCAGCT+TGG | 0.614056 | 1.3:+61071939 | MS.gene20903:CDS |
| GGTGTAGGAGAGTCATTACC+TGG | 0.615130 | 1.3:+61070721 | MS.gene20903:CDS |
| TCTGGTTTATGTCCTCAAGA+TGG | 0.622613 | 1.3:+61070889 | MS.gene20903:CDS |
| CATCAATGGACAAAGCTGGA+AGG | 0.623235 | 1.3:+61070988 | MS.gene20903:CDS |
| ACAGTTAGTGGATTCTCTGG+TGG | 0.623686 | 1.3:+61071210 | MS.gene20903:CDS |
| ATTATCATCCAAAATTGCCA+TGG | 0.624144 | 1.3:-61070838 | None:intergenic |
| ATTTGTTAGCGACAAAGATG+AGG | 0.624187 | 1.3:+61072615 | MS.gene20903:CDS |
| ACCTTAGATGTCAAGAAAGG+AGG | 0.624457 | 1.3:+61071803 | MS.gene20903:CDS |
| GAAGGTGATGTAATGAGAGG+AGG | 0.628897 | 1.3:+61071006 | MS.gene20903:CDS |
| ATGAGTTGTGGACACAAGAG+AGG | 0.634235 | 1.3:-61070297 | None:intergenic |
| TGTTAGCGACAAAGATGAGG+TGG | 0.634773 | 1.3:+61072618 | MS.gene20903:CDS |
| GTGGTTACCATTATGACACA+AGG | 0.639125 | 1.3:+61071229 | MS.gene20903:CDS |
| AGCTGAATAAGGGAAATTGG+CGG | 0.640495 | 1.3:-61072038 | None:intergenic |
| GCCAGGTTCTCTGATTCACA+AGG | 0.645424 | 1.3:+61070675 | MS.gene20903:intron |
| CAATTCTACCTTCTAGACAT+GGG | 0.645465 | 1.3:+61071839 | MS.gene20903:CDS |
| CTCAAGTAAAGCATCAACCA+AGG | 0.657316 | 1.3:-61071180 | None:intergenic |
| TCTGGTGTGATATGAAATGG+TGG | 0.678495 | 1.3:-61071989 | None:intergenic |
| GGTTACCATTATGACACAAG+GGG | 0.678691 | 1.3:+61071231 | MS.gene20903:CDS |
| GGTCAAGAAGCTCCTCACAT+GGG | 0.681692 | 1.3:+61070413 | MS.gene20903:CDS |
| GTTAGTACATCTCCATCACA+AGG | 0.685016 | 1.3:-61071887 | None:intergenic |
| ACAAAGATGAGGTGGCAGAG+TGG | 0.689156 | 1.3:+61072626 | MS.gene20903:CDS |
| TGGTTACCATTATGACACAA+GGG | 0.690726 | 1.3:+61071230 | MS.gene20903:CDS |
| ATTGGTCTGAGAATGAGTTG+TGG | 0.699603 | 1.3:-61070309 | None:intergenic |
| GGAAGTTGTTGGAAGAACAA+TGG | 0.714098 | 1.3:+61071860 | MS.gene20903:CDS |
| GTGAAGTTAAAGACACACCA+AGG | 0.745244 | 1.3:+61070815 | MS.gene20903:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGACTGATTATTAATT+TGG | + | chr1.3:61071707-61071726 | MS.gene20903:intron | 15.0% |
| !! | CTCAACTTTAAATAAAATTT+AGG | + | chr1.3:61070567-61070586 | MS.gene20903:intron | 15.0% |
| !!! | CAAATTTGTATTTTATGTTA+TGG | + | chr1.3:61072427-61072446 | MS.gene20903:intron | 15.0% |
| !!! | TAAAAATAGAAGAAATTTTG+AGG | - | chr1.3:61070521-61070540 | None:intergenic | 15.0% |
| !! | AATTAAAATTGAACAGAACA+AGG | - | chr1.3:61071393-61071412 | None:intergenic | 20.0% |
| !! | AGGACTAAAATGAAATATTA+GGG | - | chr1.3:61070501-61070520 | None:intergenic | 20.0% |
| !! | ATTTAATGGTACTTATGATT+TGG | + | chr1.3:61071029-61071048 | MS.gene20903:CDS | 20.0% |
| !!! | ATATCTTTTGTTAGTTAGAT+TGG | - | chr1.3:61071584-61071603 | None:intergenic | 20.0% |
| !!! | GAATTCAAAATTTGAAACAT+AGG | - | chr1.3:61071297-61071316 | None:intergenic | 20.0% |
| !!! | TAACAATCTTTCATTTTATG+AGG | + | chr1.3:61071086-61071105 | MS.gene20903:CDS | 20.0% |
| !!! | TTAGTCATCAAACTATTTTT+TGG | - | chr1.3:61072685-61072704 | None:intergenic | 20.0% |
| !!! | TTCCATTAATGTATTTTGTT+TGG | + | chr1.3:61071412-61071431 | MS.gene20903:intron | 20.0% |
| !!! | TTGGACTAAACAAAAAATTT+TGG | + | chr1.3:61071431-61071450 | MS.gene20903:intron | 20.0% |
| ! | AAAATGGAAATTATGACACT+AGG | + | chr1.3:61070866-61070885 | MS.gene20903:CDS | 25.0% |
| ! | AATAGTGATAAGCTGAATAA+GGG | - | chr1.3:61072051-61072070 | None:intergenic | 25.0% |
| ! | ACAGAAAAAGTTAACAAACT+TGG | + | chr1.3:61070700-61070719 | MS.gene20903:CDS | 25.0% |
| ! | ATAAGTTTCCATTAGTAAAG+TGG | - | chr1.3:61072363-61072382 | None:intergenic | 25.0% |
| ! | GAGGACTAAAATGAAATATT+AGG | - | chr1.3:61070502-61070521 | None:intergenic | 25.0% |
| ! | GGCTGAAATTTAAACTAAAA+TGG | - | chr1.3:61071752-61071771 | None:intergenic | 25.0% |
| ! | GTCCAAACAAAATACATTAA+TGG | - | chr1.3:61071417-61071436 | None:intergenic | 25.0% |
| ! | TAATAGTGATAAGCTGAATA+AGG | - | chr1.3:61072052-61072071 | None:intergenic | 25.0% |
| ! | TATGGTTATCCCATTAAAAA+AGG | + | chr1.3:61072187-61072206 | MS.gene20903:CDS | 25.0% |
| ! | TTCAATTACCACTTTACTAA+TGG | + | chr1.3:61072352-61072371 | MS.gene20903:intron | 25.0% |
| ! | TTTATGTTATGGCGAAATTT+AGG | + | chr1.3:61072438-61072457 | MS.gene20903:intron | 25.0% |
| !! | AAACATACATTTTATTGTGC+AGG | + | chr1.3:61072534-61072553 | MS.gene20903:intron | 25.0% |
| !! | ACATGTAGTTTTTGTTACTA+TGG | + | chr1.3:61072487-61072506 | MS.gene20903:intron | 25.0% |
| !! | TGGATGATAATGCTAAAAAA+TGG | + | chr1.3:61070850-61070869 | MS.gene20903:CDS | 25.0% |
| !! | TTTATTTAAAGTTGAGAACC+TGG | - | chr1.3:61070563-61070582 | None:intergenic | 25.0% |
| !!! | TTTTAGTCTTTAAATGTGTG+AGG | - | chr1.3:61071691-61071710 | None:intergenic | 25.0% |
| AAAATTGAACAGAACAAGGA+GGG | - | chr1.3:61071389-61071408 | None:intergenic | 30.0% | |
| AAGTAGACTTTACTTCTATC+AGG | + | chr1.3:61072264-61072283 | MS.gene20903:CDS | 30.0% | |
| AGACTTCAAAGAAATATCCT+TGG | + | chr1.3:61071163-61071182 | MS.gene20903:CDS | 30.0% | |
| AGATCTTTATGCTGTTCAAA+AGG | + | chr1.3:61070771-61070790 | MS.gene20903:CDS | 30.0% | |
| ATAAGCTGAATAAGGGAAAT+TGG | - | chr1.3:61072044-61072063 | None:intergenic | 30.0% | |
| ATAAGTTTCCAAAAGTAGAG+TGG | - | chr1.3:61072305-61072324 | None:intergenic | 30.0% | |
| ATATGGACATCTATTGATAC+TGG | + | chr1.3:61072583-61072602 | MS.gene20903:CDS | 30.0% | |
| ATTATCATCCAAAATTGCCA+TGG | - | chr1.3:61070841-61070860 | None:intergenic | 30.0% | |
| GATACATTCAGAAACTAAAG+TGG | - | chr1.3:61071480-61071499 | None:intergenic | 30.0% | |
| GTTAACCTCACCTTAAAATT+TGG | - | chr1.3:61071785-61071804 | None:intergenic | 30.0% | |
| GTTCAAAAGGAACTGTATTT+AGG | + | chr1.3:61070784-61070803 | MS.gene20903:CDS | 30.0% | |
| TAAAATTGAACAGAACAAGG+AGG | - | chr1.3:61071390-61071409 | None:intergenic | 30.0% | |
| TATCCCATTAAAAAAGGTGA+TGG | + | chr1.3:61072193-61072212 | MS.gene20903:CDS | 30.0% | |
| TTAACCTTAGATGTCAAGAA+AGG | + | chr1.3:61071800-61071819 | MS.gene20903:CDS | 30.0% | |
| ! | CAATCTTTCATTTTATGAGG+TGG | + | chr1.3:61071089-61071108 | MS.gene20903:CDS | 30.0% |
| ! | CATTAAAAAAGGTGATGGTT+GGG | + | chr1.3:61072198-61072217 | MS.gene20903:CDS | 30.0% |
| ! | CTGAATATCTTTTTGTCATC+TGG | - | chr1.3:61072010-61072029 | None:intergenic | 30.0% |
| ! | TCTATGTTGTTTATGTCTTC+TGG | - | chr1.3:61070754-61070773 | None:intergenic | 30.0% |
| ! | TCTTGAGTCACCAAATTTTA+AGG | + | chr1.3:61071772-61071791 | MS.gene20903:CDS | 30.0% |
| ! | TGGAATTTTTGCAATGAAGT+TGG | + | chr1.3:61070392-61070411 | MS.gene20903:CDS | 30.0% |
| ! | TTAAAATTTGGTGACTCAAG+AGG | - | chr1.3:61071773-61071792 | None:intergenic | 30.0% |
| ! | TTCAATTACCACTCTACTTT+TGG | + | chr1.3:61072294-61072313 | MS.gene20903:intron | 30.0% |
| ! | TTCATTTTATGAGGTGGTTT+GGG | + | chr1.3:61071095-61071114 | MS.gene20903:CDS | 30.0% |
| ! | TTTCATTTTATGAGGTGGTT+TGG | + | chr1.3:61071094-61071113 | MS.gene20903:CDS | 30.0% |
| ! | TTTGAAACATAGGATTCTGA+AGG | - | chr1.3:61071287-61071306 | None:intergenic | 30.0% |
| !! | AAAGTTAACAAACTTGGTGT+AGG | + | chr1.3:61070706-61070725 | MS.gene20903:CDS | 30.0% |
| !!! | CAACCATCACCTTTTTTAAT+GGG | - | chr1.3:61072199-61072218 | None:intergenic | 30.0% |
| !!! | GAATGTTTTGATCTTTCACA+AGG | + | chr1.3:61070452-61070471 | MS.gene20903:CDS | 30.0% |
| !!! | TTTTTTGTTGTTGTATGACC+AGG | + | chr1.3:61070542-61070561 | MS.gene20903:intron | 30.0% |
| AGAAAGTTAATGTTGGGAGT+TGG | + | chr1.3:61071121-61071140 | MS.gene20903:CDS | 35.0% | |
| AGAAGTAAAGTCTACTTGCT+AGG | - | chr1.3:61072261-61072280 | None:intergenic | 35.0% | |
| AGTTATTGCCTCATCCTATT+TGG | + | chr1.3:61072158-61072177 | MS.gene20903:CDS | 35.0% | |
| ATGTCCTCAAGATGGTAAAA+GGG | + | chr1.3:61070897-61070916 | MS.gene20903:CDS | 35.0% | |
| CAATTCTACCTTCTAGACAT+GGG | + | chr1.3:61071839-61071858 | MS.gene20903:CDS | 35.0% | |
| GGGAGAAGAAAGTTAATGTT+GGG | + | chr1.3:61071115-61071134 | MS.gene20903:CDS | 35.0% | |
| GTAATGAGAGGAGGATTTAA+TGG | + | chr1.3:61071015-61071034 | MS.gene20903:CDS | 35.0% | |
| TAACCATACTCACTCCAAAT+AGG | - | chr1.3:61072175-61072194 | None:intergenic | 35.0% | |
| TAAGGATCACAAGTACTAAC+AGG | - | chr1.3:61072109-61072128 | None:intergenic | 35.0% | |
| TATGTCCTCAAGATGGTAAA+AGG | + | chr1.3:61070896-61070915 | MS.gene20903:CDS | 35.0% | |
| TCAATTCTACCTTCTAGACA+TGG | + | chr1.3:61071838-61071857 | MS.gene20903:CDS | 35.0% | |
| TCATCTGGTGTGATATGAAA+TGG | - | chr1.3:61071995-61072014 | None:intergenic | 35.0% | |
| TGGGAGAAGAAAGTTAATGT+TGG | + | chr1.3:61071114-61071133 | MS.gene20903:CDS | 35.0% | |
| TGGTTACCATTATGACACAA+GGG | + | chr1.3:61071230-61071249 | MS.gene20903:CDS | 35.0% | |
| TGTGCTTGAGGATTACTATA+AGG | - | chr1.3:61072127-61072146 | None:intergenic | 35.0% | |
| ! | ACATAGGATTCTGAAGGAAA+TGG | - | chr1.3:61071281-61071300 | None:intergenic | 35.0% |
| ! | ACATTTTATTGTGCAGGATC+CGG | + | chr1.3:61072540-61072559 | MS.gene20903:intron | 35.0% |
| ! | ATTTGTTAGCGACAAAGATG+AGG | + | chr1.3:61072615-61072634 | MS.gene20903:CDS | 35.0% |
| ! | CCATTAAAAAAGGTGATGGT+TGG | + | chr1.3:61072197-61072216 | MS.gene20903:CDS | 35.0% |
| ! | GATTCTAGTTGTAGAGATAG+TGG | + | chr1.3:61071051-61071070 | MS.gene20903:CDS | 35.0% |
| ! | TAGAAGGTAGAATTGACTCT+TGG | - | chr1.3:61071834-61071853 | None:intergenic | 35.0% |
| !! | CACACTTCGAAATGTTTTTG+TGG | - | chr1.3:61071507-61071526 | None:intergenic | 35.0% |
| !!! | AGTCACCAAATTTTAAGGTG+AGG | + | chr1.3:61071777-61071796 | MS.gene20903:CDS | 35.0% |
| !!! | CCAACCATCACCTTTTTTAA+TGG | - | chr1.3:61072200-61072219 | None:intergenic | 35.0% |
| AACAACTTCCCATGTCTAGA+AGG | - | chr1.3:61071850-61071869 | None:intergenic | 40.0% | |
| AACCCATCTTCTGTCATCAA+TGG | + | chr1.3:61070974-61070993 | MS.gene20903:CDS | 40.0% | |
| AACCTTCCTGGTTTAAAAGG+AGG | - | chr1.3:61070925-61070944 | None:intergenic | 40.0% | |
| ACAACGGTTCAAAATCACCT+CGG | - | chr1.3:61070649-61070668 | None:intergenic | 40.0% | |
| ACCTTAGATGTCAAGAAAGG+AGG | + | chr1.3:61071803-61071822 | MS.gene20903:CDS | 40.0% | |
| AGAACCTGGCAATACAACAA+CGG | - | chr1.3:61070665-61070684 | None:intergenic | 40.0% | |
| AGCTGAATAAGGGAAATTGG+CGG | - | chr1.3:61072041-61072060 | None:intergenic | 40.0% | |
| ATGCATCCTGTTCCAAAACA+AGG | - | chr1.3:61070949-61070968 | None:intergenic | 40.0% | |
| ATGGCGAAATTTAGGTGACA+CGG | + | chr1.3:61072446-61072465 | MS.gene20903:intron | 40.0% | |
| CAAAACATTCAGCTGCTCTT+GGG | - | chr1.3:61070442-61070461 | None:intergenic | 40.0% | |
| CTTCTCCTGCGAAAAGAATA+TGG | + | chr1.3:61072566-61072585 | MS.gene20903:CDS | 40.0% | |
| GACAATTGCCTAAACCTGTA+GGG | - | chr1.3:61071970-61071989 | None:intergenic | 40.0% | |
| GCAAAAATTCCAAGCTTCGA+AGG | - | chr1.3:61070384-61070403 | None:intergenic | 40.0% | |
| GGAAACCTTCCTGGTTTAAA+AGG | - | chr1.3:61070928-61070947 | None:intergenic | 40.0% | |
| GGAAATTATGACACTAGGTC+TGG | + | chr1.3:61070871-61070890 | MS.gene20903:CDS | 40.0% | |
| GGAAGTTGTTGGAAGAACAA+TGG | + | chr1.3:61071860-61071879 | MS.gene20903:CDS | 40.0% | |
| GGCAAACACATCACACATTT+AGG | - | chr1.3:61071459-61071478 | None:intergenic | 40.0% | |
| GGTTACCATTATGACACAAG+GGG | + | chr1.3:61071231-61071250 | MS.gene20903:CDS | 40.0% | |
| GTGAAGTTAAAGACACACCA+AGG | + | chr1.3:61070815-61070834 | MS.gene20903:CDS | 40.0% | |
| GTGGTTACCATTATGACACA+AGG | + | chr1.3:61071229-61071248 | MS.gene20903:CDS | 40.0% | |
| GTGTCTCTTGTTAGTCACTT+TGG | - | chr1.3:61071616-61071635 | None:intergenic | 40.0% | |
| GTTAGTACATCTCCATCACA+AGG | - | chr1.3:61071890-61071909 | None:intergenic | 40.0% | |
| TACTCACTCCAAATAGGATG+AGG | - | chr1.3:61072169-61072188 | None:intergenic | 40.0% | |
| TATCACTATTACTGTGCTCC+AGG | + | chr1.3:61072061-61072080 | MS.gene20903:CDS | 40.0% | |
| TCAAAACATTCAGCTGCTCT+TGG | - | chr1.3:61070443-61070462 | None:intergenic | 40.0% | |
| TCCTCCTTTCTTGACATCTA+AGG | - | chr1.3:61071807-61071826 | None:intergenic | 40.0% | |
| TCTGGTGTGATATGAAATGG+TGG | - | chr1.3:61071992-61072011 | None:intergenic | 40.0% | |
| TGAACTATCTCTTGTGCTTG+AGG | - | chr1.3:61072139-61072158 | None:intergenic | 40.0% | |
| TTAGATGTCAAGAAAGGAGG+AGG | + | chr1.3:61071806-61071825 | MS.gene20903:CDS | 40.0% | |
| TTCTAGACATGGGAAGTTGT+TGG | + | chr1.3:61071849-61071868 | MS.gene20903:CDS | 40.0% | |
| TTGAGAGCTGATACAGTTAG+TGG | + | chr1.3:61071198-61071217 | MS.gene20903:CDS | 40.0% | |
| ! | AAAAAAGGTGATGGTTGGGT+TGG | + | chr1.3:61072202-61072221 | MS.gene20903:CDS | 40.0% |
| ! | ATTGATGACAGAAGATGGGT+TGG | - | chr1.3:61070975-61070994 | None:intergenic | 40.0% |
| ! | ATTGGTCTGAGAATGAGTTG+TGG | - | chr1.3:61070312-61070331 | None:intergenic | 40.0% |
| ! | CATCCTATTTGGAGTGAGTA+TGG | + | chr1.3:61072169-61072188 | MS.gene20903:CDS | 40.0% |
| ! | CATTTTATTGTGCAGGATCC+GGG | + | chr1.3:61072541-61072560 | MS.gene20903:intron | 40.0% |
| ! | CTCAAGTAAAGCATCAACCA+AGG | - | chr1.3:61071183-61071202 | None:intergenic | 40.0% |
| ! | GATGTCCATATTCTTTTCGC+AGG | - | chr1.3:61072574-61072593 | None:intergenic | 40.0% |
| ! | GTCCATTGATGACAGAAGAT+GGG | - | chr1.3:61070979-61070998 | None:intergenic | 40.0% |
| ! | TACCTCCTTTTAAACCAGGA+AGG | + | chr1.3:61070920-61070939 | MS.gene20903:CDS | 40.0% |
| ! | TCATTTTACAACTGTCTCCG+AGG | + | chr1.3:61070629-61070648 | MS.gene20903:intron | 40.0% |
| ! | TCTAAATGTTGAGCATTGCC+TGG | - | chr1.3:61072082-61072101 | None:intergenic | 40.0% |
| ! | TCTGGTTTATGTCCTCAAGA+TGG | + | chr1.3:61070889-61070908 | MS.gene20903:CDS | 40.0% |
| ! | TGTCCATTGATGACAGAAGA+TGG | - | chr1.3:61070980-61070999 | None:intergenic | 40.0% |
| !! | GATACAGTTAGTGGATTCTC+TGG | + | chr1.3:61071207-61071226 | MS.gene20903:CDS | 40.0% |
| !!! | AGGTTTCCTTGTTTTGGAAC+AGG | + | chr1.3:61070940-61070959 | MS.gene20903:CDS | 40.0% |
| AACAATGGTGCACCTTGTGA+TGG | + | chr1.3:61071875-61071894 | MS.gene20903:CDS | 45.0% | |
| ACCTTGTGAATCAGAGAACC+TGG | - | chr1.3:61070679-61070698 | None:intergenic | 45.0% | |
| ACTTGGGAACTTGATGTTGG+TGG | + | chr1.3:61072235-61072254 | MS.gene20903:CDS | 45.0% | |
| AGACCATCTCTTTGCATTCC+TGG | - | chr1.3:61070353-61070372 | None:intergenic | 45.0% | |
| AGGACTTGGGAACTTGATGT+TGG | + | chr1.3:61072232-61072251 | MS.gene20903:CDS | 45.0% | |
| ATCCAAAATTGCCATGGCCT+TGG | - | chr1.3:61070835-61070854 | None:intergenic | 45.0% | |
| ATGAGTTGTGGACACAAGAG+AGG | - | chr1.3:61070300-61070319 | None:intergenic | 45.0% | |
| CATCAATGGACAAAGCTGGA+AGG | + | chr1.3:61070988-61071007 | MS.gene20903:CDS | 45.0% | |
| CCAAAACAAGGAAACCTTCC+TGG | - | chr1.3:61070937-61070956 | None:intergenic | 45.0% | |
| CTGGAAGGTGATGTAATGAG+AGG | + | chr1.3:61071003-61071022 | MS.gene20903:CDS | 45.0% | |
| CTGTCATCAATGGACAAAGC+TGG | + | chr1.3:61070984-61071003 | MS.gene20903:CDS | 45.0% | |
| GAAGGTGATGTAATGAGAGG+AGG | + | chr1.3:61071006-61071025 | MS.gene20903:CDS | 45.0% | |
| GACCATCTCTTTGCATTCCT+GGG | - | chr1.3:61070352-61070371 | None:intergenic | 45.0% | |
| GCATTCCCCTTGTGTCATAA+TGG | - | chr1.3:61071239-61071258 | None:intergenic | 45.0% | |
| GGACAATTGCCTAAACCTGT+AGG | - | chr1.3:61071971-61071990 | None:intergenic | 45.0% | |
| TAAGAGTAGCCTTCGAAGCT+TGG | + | chr1.3:61070372-61070391 | MS.gene20903:CDS | 45.0% | |
| TCAATCCAGAAACTCCAGCT+TGG | + | chr1.3:61071939-61071958 | MS.gene20903:CDS | 45.0% | |
| TGAACCGTTGTTGTATTGCC+AGG | + | chr1.3:61070658-61070677 | MS.gene20903:intron | 45.0% | |
| TGGCGAAATTTAGGTGACAC+GGG | + | chr1.3:61072447-61072466 | MS.gene20903:intron | 45.0% | |
| TGTTAGCGACAAAGATGAGG+TGG | + | chr1.3:61072618-61072637 | MS.gene20903:CDS | 45.0% | |
| TTAAAGACACACCAAGGCCA+TGG | + | chr1.3:61070821-61070840 | MS.gene20903:CDS | 45.0% | |
| ! | GGTACCCTTTTACCATCTTG+AGG | - | chr1.3:61070904-61070923 | None:intergenic | 45.0% |
| !! | ACAGTTAGTGGATTCTCTGG+TGG | + | chr1.3:61071210-61071229 | MS.gene20903:CDS | 45.0% |
| !! | AGGGTACCTCCTTTTAAACC+AGG | + | chr1.3:61070916-61070935 | MS.gene20903:CDS | 45.0% |
| !! | CCAGGAAGGTTTCCTTGTTT+TGG | + | chr1.3:61070934-61070953 | MS.gene20903:CDS | 45.0% |
| ACAAAGATGAGGTGGCAGAG+TGG | + | chr1.3:61072626-61072645 | MS.gene20903:CDS | 50.0% | |
| ATGTCTTCTGGTCTCAGACC+AGG | - | chr1.3:61070742-61070761 | None:intergenic | 50.0% | |
| CAGACCAATGTCTCAGCTGT+AGG | + | chr1.3:61070323-61070342 | MS.gene20903:CDS | 50.0% | |
| CTACACCAAGCTGGAGTTTC+TGG | - | chr1.3:61071947-61071966 | None:intergenic | 50.0% | |
| GACCCAGGAATGCAAAGAGA+TGG | + | chr1.3:61070347-61070366 | MS.gene20903:CDS | 50.0% | |
| GCCAGGTTCTCTGATTCACA+AGG | + | chr1.3:61070675-61070694 | MS.gene20903:intron | 50.0% | |
| GGCGAAATTTAGGTGACACG+GGG | + | chr1.3:61072448-61072467 | MS.gene20903:intron | 50.0% | |
| GGTCAAGAAGCTCCTCACAT+GGG | + | chr1.3:61070413-61070432 | MS.gene20903:CDS | 50.0% | |
| GGTGTAGGAGAGTCATTACC+TGG | + | chr1.3:61070721-61070740 | MS.gene20903:CDS | 50.0% | |
| GTCTCCTACAGCTGAGACAT+TGG | - | chr1.3:61070330-61070349 | None:intergenic | 50.0% | |
| TGGTCAAGAAGCTCCTCACA+TGG | + | chr1.3:61070412-61070431 | MS.gene20903:CDS | 50.0% | |
| TGGTGTAGCCCTACAGGTTT+AGG | + | chr1.3:61071959-61071978 | MS.gene20903:CDS | 50.0% | |
| ! | CACCAAGGCCATGGCAATTT+TGG | + | chr1.3:61070830-61070849 | MS.gene20903:CDS | 50.0% |
| ! | CTTTTCGCAGGAGAAGTTCC+CGG | - | chr1.3:61072562-61072581 | None:intergenic | 50.0% |
| !! | ATGGTTGGGTTGGTGATGCA+AGG | + | chr1.3:61072212-61072231 | MS.gene20903:CDS | 50.0% |
| !! | GGTTGGTGATGCAAGGACTT+GGG | + | chr1.3:61072219-61072238 | MS.gene20903:CDS | 50.0% |
| !! | GGGTTGGTGATGCAAGGACT+TGG | + | chr1.3:61072218-61072237 | MS.gene20903:CDS | 55.0% |
| CCTGTAGGGCTACACCAAGC+TGG | - | chr1.3:61071956-61071975 | None:intergenic | 60.0% | |
| GCTCTTGGGCTACCCATGTG+AGG | - | chr1.3:61070428-61070447 | None:intergenic | 60.0% | |
| GTCTCAGCTGTAGGAGACCC+AGG | + | chr1.3:61070332-61070351 | MS.gene20903:CDS | 60.0% | |
| !! | CCAGCTTGGTGTAGCCCTAC+AGG | + | chr1.3:61071953-61071972 | MS.gene20903:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 61070242 | 61072714 | 61070242 | ID=MS.gene20903 |
| chr1.3 | mRNA | 61070242 | 61072714 | 61070242 | ID=MS.gene20903.t1;Parent=MS.gene20903 |
| chr1.3 | exon | 61070242 | 61070473 | 61070242 | ID=MS.gene20903.t1.exon1;Parent=MS.gene20903.t1 |
| chr1.3 | CDS | 61070242 | 61070473 | 61070242 | ID=cds.MS.gene20903.t1;Parent=MS.gene20903.t1 |
| chr1.3 | exon | 61070680 | 61071266 | 61070680 | ID=MS.gene20903.t1.exon2;Parent=MS.gene20903.t1 |
| chr1.3 | CDS | 61070680 | 61071266 | 61070680 | ID=cds.MS.gene20903.t1;Parent=MS.gene20903.t1 |
| chr1.3 | exon | 61071770 | 61072285 | 61071770 | ID=MS.gene20903.t1.exon3;Parent=MS.gene20903.t1 |
| chr1.3 | CDS | 61071770 | 61072285 | 61071770 | ID=cds.MS.gene20903.t1;Parent=MS.gene20903.t1 |
| chr1.3 | exon | 61072556 | 61072714 | 61072556 | ID=MS.gene20903.t1.exon4;Parent=MS.gene20903.t1 |
| chr1.3 | CDS | 61072556 | 61072714 | 61072556 | ID=cds.MS.gene20903.t1;Parent=MS.gene20903.t1 |
| Gene Sequence |
| Protein sequence |
