Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87325.t1 | XP_003629580.1 | 99.7 | 360 | 1 | 0 | 1 | 360 | 1 | 360 | 1.00E-208 | 735.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87325.t1 | Q9C566 | 71.1 | 360 | 103 | 1 | 1 | 359 | 1 | 360 | 6.8e-153 | 541.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87325.t1 | G7LGD2 | 99.7 | 360 | 1 | 0 | 1 | 360 | 1 | 360 | 7.3e-209 | 735.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052664 | MS.gene87325 | 0.801769 | 7.70E-49 | -1.69E-46 |
| MS.gene053224 | MS.gene87325 | 0.80479 | 1.82E-49 | -1.69E-46 |
| MS.gene057165 | MS.gene87325 | 0.823204 | 1.57E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87325.t1 | MTR_8g079690 | 99.722 | 360 | 1 | 0 | 1 | 360 | 1 | 360 | 0.0 | 742 |
| MS.gene87325.t1 | MTR_4g086760 | 73.961 | 361 | 93 | 1 | 1 | 360 | 1 | 361 | 0.0 | 566 |
| MS.gene87325.t1 | MTR_4g086760 | 74.096 | 332 | 85 | 1 | 1 | 331 | 1 | 332 | 0.0 | 525 |
| MS.gene87325.t1 | MTR_4g086760 | 73.567 | 314 | 82 | 1 | 1 | 313 | 1 | 314 | 1.38e-175 | 490 |
| MS.gene87325.t1 | MTR_7g116340 | 63.429 | 175 | 60 | 3 | 1 | 174 | 1 | 172 | 6.90e-71 | 219 |
| MS.gene87325.t1 | MTR_7g095750 | 60.773 | 181 | 68 | 2 | 3 | 182 | 6 | 184 | 1.55e-69 | 229 |
| MS.gene87325.t1 | MTR_4g075290 | 61.143 | 175 | 64 | 3 | 1 | 174 | 1 | 172 | 1.86e-69 | 215 |
| MS.gene87325.t1 | MTR_3g463900 | 60.355 | 169 | 65 | 2 | 5 | 173 | 35 | 201 | 2.70e-64 | 203 |
| MS.gene87325.t1 | MTR_3g070500 | 58.480 | 171 | 69 | 2 | 5 | 175 | 65 | 233 | 1.13e-63 | 202 |
| MS.gene87325.t1 | MTR_3g117750 | 58.140 | 172 | 68 | 3 | 5 | 175 | 13 | 181 | 2.07e-63 | 201 |
| MS.gene87325.t1 | MTR_1g117010 | 57.558 | 172 | 62 | 2 | 5 | 173 | 78 | 241 | 3.57e-61 | 197 |
| MS.gene87325.t1 | MTR_1g117010 | 57.558 | 172 | 62 | 2 | 5 | 173 | 78 | 241 | 3.57e-61 | 197 |
| MS.gene87325.t1 | MTR_7g110980 | 55.030 | 169 | 68 | 1 | 5 | 173 | 97 | 257 | 9.69e-60 | 193 |
| MS.gene87325.t1 | MTR_1g085560 | 57.647 | 170 | 63 | 2 | 5 | 173 | 86 | 247 | 1.97e-59 | 192 |
| MS.gene87325.t1 | MTR_4g073650 | 56.805 | 169 | 72 | 1 | 5 | 173 | 47 | 214 | 3.43e-59 | 191 |
| MS.gene87325.t1 | MTR_8g040180 | 55.233 | 172 | 73 | 2 | 3 | 173 | 17 | 185 | 3.14e-58 | 187 |
| MS.gene87325.t1 | MTR_3g070500 | 64.228 | 123 | 43 | 1 | 5 | 127 | 65 | 186 | 7.30e-50 | 166 |
| MS.gene87325.t1 | MTR_3g107660 | 47.500 | 200 | 100 | 3 | 3 | 201 | 9 | 204 | 2.57e-46 | 169 |
| MS.gene87325.t1 | MTR_1g011980 | 49.708 | 171 | 82 | 3 | 6 | 175 | 9 | 176 | 2.53e-43 | 160 |
| MS.gene87325.t1 | MTR_8g036015 | 49.664 | 149 | 62 | 3 | 18 | 165 | 10 | 146 | 8.95e-40 | 138 |
| MS.gene87325.t1 | MTR_2g085075 | 50.000 | 154 | 64 | 3 | 18 | 170 | 471 | 612 | 4.58e-38 | 144 |
| MS.gene87325.t1 | MTR_3g070500 | 63.542 | 96 | 34 | 1 | 5 | 100 | 65 | 159 | 1.03e-36 | 130 |
| MS.gene87325.t1 | MTR_3g070500 | 62.000 | 100 | 37 | 1 | 5 | 104 | 65 | 163 | 1.04e-36 | 130 |
| MS.gene87325.t1 | MTR_7g105220 | 44.242 | 165 | 74 | 5 | 4 | 167 | 10 | 157 | 6.17e-36 | 129 |
| MS.gene87325.t1 | MTR_5g015500 | 40.102 | 197 | 83 | 6 | 18 | 213 | 314 | 476 | 3.10e-32 | 127 |
| MS.gene87325.t1 | MTR_5g015500 | 40.102 | 197 | 83 | 6 | 18 | 213 | 354 | 516 | 4.84e-32 | 127 |
| MS.gene87325.t1 | MTR_2g023120 | 43.919 | 148 | 66 | 6 | 18 | 161 | 22 | 156 | 2.41e-22 | 98.6 |
| MS.gene87325.t1 | MTR_3g085705 | 52.273 | 88 | 38 | 2 | 64 | 151 | 32 | 115 | 5.63e-21 | 87.8 |
| MS.gene87325.t1 | MTR_6g084140 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 1.28e-17 | 84.7 |
| MS.gene87325.t1 | MTR_6g084140 | 34.591 | 159 | 83 | 5 | 18 | 167 | 27 | 173 | 1.59e-17 | 84.3 |
| MS.gene87325.t1 | MTR_8g080980 | 35.366 | 164 | 96 | 4 | 203 | 359 | 383 | 543 | 5.19e-17 | 82.8 |
| MS.gene87325.t1 | MTR_8g012340 | 34.965 | 143 | 89 | 3 | 219 | 360 | 409 | 548 | 1.40e-16 | 81.3 |
| MS.gene87325.t1 | MTR_8g442420 | 33.962 | 159 | 84 | 5 | 18 | 167 | 10 | 156 | 1.42e-16 | 81.3 |
| MS.gene87325.t1 | MTR_7g053470 | 33.333 | 174 | 105 | 5 | 194 | 359 | 369 | 539 | 2.99e-15 | 77.4 |
| MS.gene87325.t1 | MTR_1g094065 | 33.758 | 157 | 81 | 7 | 17 | 170 | 88 | 224 | 7.99e-14 | 70.5 |
| MS.gene87325.t1 | MTR_1g035360 | 31.818 | 154 | 89 | 4 | 17 | 170 | 87 | 224 | 1.67e-12 | 66.6 |
| MS.gene87325.t1 | MTR_1g017870 | 32.164 | 171 | 92 | 6 | 203 | 359 | 381 | 541 | 9.59e-12 | 66.6 |
| MS.gene87325.t1 | MTR_1g017870 | 32.164 | 171 | 92 | 6 | 203 | 359 | 381 | 541 | 1.01e-11 | 66.6 |
| MS.gene87325.t1 | MTR_1g017870 | 32.164 | 171 | 92 | 6 | 203 | 359 | 357 | 517 | 1.61e-11 | 65.9 |
| MS.gene87325.t1 | MTR_1g017870 | 31.818 | 176 | 96 | 6 | 198 | 359 | 166 | 331 | 1.63e-11 | 65.1 |
| MS.gene87325.t1 | MTR_1g017870 | 31.818 | 176 | 96 | 6 | 198 | 359 | 250 | 415 | 1.78e-11 | 65.5 |
| MS.gene87325.t1 | MTR_1g017870 | 31.818 | 176 | 96 | 6 | 198 | 359 | 166 | 331 | 2.00e-11 | 65.1 |
| MS.gene87325.t1 | MTR_1g017870 | 31.818 | 176 | 96 | 6 | 198 | 359 | 250 | 415 | 2.30e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87325.t1 | AT2G15790 | 71.111 | 360 | 103 | 1 | 1 | 359 | 1 | 360 | 0.0 | 545 |
| MS.gene87325.t1 | AT3G63400 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 3.08e-75 | 238 |
| MS.gene87325.t1 | AT3G63400 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 2.99e-73 | 238 |
| MS.gene87325.t1 | AT3G63400 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 2.99e-73 | 238 |
| MS.gene87325.t1 | AT3G63400 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 2.99e-73 | 238 |
| MS.gene87325.t1 | AT4G34870 | 62.857 | 175 | 61 | 3 | 1 | 174 | 1 | 172 | 3.50e-71 | 220 |
| MS.gene87325.t1 | AT2G16600 | 63.006 | 173 | 60 | 3 | 3 | 174 | 4 | 173 | 5.52e-71 | 219 |
| MS.gene87325.t1 | AT4G38740 | 61.714 | 175 | 63 | 3 | 1 | 174 | 1 | 172 | 2.28e-70 | 218 |
| MS.gene87325.t1 | AT2G21130 | 61.494 | 174 | 63 | 3 | 3 | 175 | 4 | 174 | 3.97e-70 | 217 |
| MS.gene87325.t1 | AT3G56070 | 63.218 | 174 | 60 | 3 | 1 | 173 | 1 | 171 | 9.35e-70 | 216 |
| MS.gene87325.t1 | AT3G56070 | 63.218 | 174 | 60 | 3 | 1 | 173 | 1 | 171 | 9.35e-70 | 216 |
| MS.gene87325.t1 | AT2G29960 | 59.763 | 169 | 66 | 2 | 5 | 173 | 33 | 199 | 5.30e-64 | 202 |
| MS.gene87325.t1 | AT2G29960 | 59.763 | 169 | 66 | 2 | 5 | 173 | 33 | 199 | 5.30e-64 | 202 |
| MS.gene87325.t1 | AT5G13120 | 57.386 | 176 | 64 | 2 | 5 | 177 | 87 | 254 | 5.35e-64 | 204 |
| MS.gene87325.t1 | AT5G13120 | 57.386 | 176 | 64 | 2 | 5 | 177 | 91 | 258 | 6.39e-64 | 204 |
| MS.gene87325.t1 | AT3G55920 | 60.000 | 170 | 66 | 2 | 5 | 174 | 60 | 227 | 8.64e-64 | 203 |
| MS.gene87325.t1 | AT3G62030 | 58.580 | 169 | 62 | 1 | 5 | 173 | 95 | 255 | 1.09e-62 | 201 |
| MS.gene87325.t1 | AT3G62030 | 58.580 | 169 | 62 | 1 | 5 | 173 | 96 | 256 | 1.14e-62 | 201 |
| MS.gene87325.t1 | AT3G62030 | 58.580 | 169 | 62 | 1 | 5 | 173 | 149 | 309 | 2.75e-62 | 202 |
| MS.gene87325.t1 | AT5G58710 | 58.580 | 169 | 68 | 2 | 5 | 173 | 36 | 202 | 1.02e-60 | 194 |
| MS.gene87325.t1 | AT2G38730 | 56.395 | 172 | 71 | 2 | 3 | 173 | 31 | 199 | 4.67e-59 | 189 |
| MS.gene87325.t1 | AT2G29960 | 57.396 | 169 | 60 | 3 | 5 | 173 | 33 | 189 | 1.83e-58 | 188 |
| MS.gene87325.t1 | AT4G34960 | 53.846 | 169 | 77 | 1 | 5 | 173 | 48 | 215 | 1.86e-57 | 186 |
| MS.gene87325.t1 | AT2G16600 | 55.491 | 173 | 51 | 3 | 3 | 174 | 4 | 151 | 4.84e-57 | 183 |
| MS.gene87325.t1 | AT4G34960 | 57.377 | 122 | 51 | 1 | 5 | 126 | 48 | 168 | 6.88e-44 | 149 |
| MS.gene87325.t1 | AT4G32420 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 4.35e-43 | 159 |
| MS.gene87325.t1 | AT4G32420 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 4.35e-43 | 159 |
| MS.gene87325.t1 | AT4G32420 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 4.35e-43 | 159 |
| MS.gene87325.t1 | AT4G32420 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 4.35e-43 | 159 |
| MS.gene87325.t1 | AT3G22920 | 46.703 | 182 | 85 | 6 | 1 | 179 | 1 | 173 | 2.99e-41 | 145 |
| MS.gene87325.t1 | AT4G32420 | 48.993 | 149 | 76 | 0 | 3 | 151 | 6 | 154 | 7.95e-41 | 153 |
| MS.gene87325.t1 | AT3G44600 | 51.299 | 154 | 62 | 3 | 18 | 170 | 485 | 626 | 3.08e-39 | 147 |
| MS.gene87325.t1 | AT1G01940 | 48.993 | 149 | 63 | 3 | 18 | 165 | 10 | 146 | 1.19e-38 | 135 |
| MS.gene87325.t1 | AT2G36130 | 44.242 | 165 | 74 | 5 | 4 | 167 | 10 | 157 | 1.50e-35 | 127 |
| MS.gene87325.t1 | AT5G67530 | 44.156 | 154 | 73 | 4 | 18 | 170 | 353 | 494 | 1.27e-32 | 128 |
| MS.gene87325.t1 | AT4G33060 | 43.919 | 148 | 66 | 6 | 18 | 161 | 22 | 156 | 3.30e-26 | 109 |
| MS.gene87325.t1 | AT1G53720 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 3.61e-19 | 87.8 |
| MS.gene87325.t1 | AT1G53720 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 1.18e-18 | 87.4 |
| MS.gene87325.t1 | AT3G25230 | 36.207 | 174 | 100 | 5 | 194 | 359 | 375 | 545 | 4.20e-18 | 85.9 |
| MS.gene87325.t1 | AT3G25230 | 36.207 | 174 | 100 | 5 | 194 | 359 | 375 | 545 | 4.69e-18 | 85.9 |
| MS.gene87325.t1 | AT5G48570 | 32.121 | 165 | 102 | 3 | 203 | 360 | 395 | 556 | 1.83e-15 | 78.2 |
| MS.gene87325.t1 | AT1G58450 | 35.172 | 145 | 83 | 4 | 219 | 359 | 17 | 154 | 5.90e-13 | 66.6 |
| MS.gene87325.t1 | AT2G47320 | 29.801 | 151 | 91 | 4 | 17 | 167 | 86 | 221 | 5.82e-11 | 62.4 |
Find 105 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCAAGGCTTTGCGCTATT+TGG | 0.169942 | 8.3:-24612598 | MS.gene87325:CDS |
| CAGAGAAGAGCACTGCTTTA+AGG | 0.171724 | 8.3:-24612423 | MS.gene87325:CDS |
| CAGGCCTGTAAATTAAAATT+AGG | 0.205661 | 8.3:-24611660 | MS.gene87325:CDS |
| TCTCTCTGCACCGGCGAAAA+AGG | 0.252295 | 8.3:-24613535 | MS.gene87325:CDS |
| GATGGGAAGCATGTGGTGTT+TGG | 0.308347 | 8.3:-24613256 | MS.gene87325:CDS |
| TGTATTACTGACCTTCTTCC+TGG | 0.341120 | 8.3:+24608543 | None:intergenic |
| AACTGACTCCCATTGGTGTT+TGG | 0.342691 | 8.3:+24613310 | None:intergenic |
| CTGTTGAGCTTGGTCCGGTT+GGG | 0.343040 | 8.3:-24613201 | MS.gene87325:CDS |
| GACGACGAGGACGCCACATT+TGG | 0.346987 | 8.3:-24613278 | MS.gene87325:CDS |
| GTTGAATCTATCAAAGGCTT+TGG | 0.371678 | 8.3:-24613013 | MS.gene87325:CDS |
| ATGGGAAGCATGTGGTGTTT+GGG | 0.375216 | 8.3:-24613255 | MS.gene87325:CDS |
| CTTTGGAAATGAACACTATA+AGG | 0.380141 | 8.3:-24612996 | MS.gene87325:intron |
| CAGTGGAGCTTTACTTGATT+CGG | 0.393358 | 8.3:-24611631 | MS.gene87325:CDS |
| AATAGTCACCAACCATCATT+TGG | 0.395698 | 8.3:+24609200 | None:intergenic |
| TTGCTGAAGGGGAGGATGAA+GGG | 0.404415 | 8.3:-24613129 | MS.gene87325:CDS |
| TGAAAGGGATTGGAGTTGTT+AGG | 0.404472 | 8.3:-24613225 | MS.gene87325:CDS |
| ACCTAAAACACGAACGGAAA+GGG | 0.412914 | 8.3:-24613357 | MS.gene87325:CDS |
| CAATGACCTGGATGCCGCTC+TGG | 0.426988 | 8.3:-24609252 | MS.gene87325:CDS |
| GGGAAAGTTGTGAAAGGGAT+TGG | 0.430883 | 8.3:-24613235 | MS.gene87325:CDS |
| TGCGCTATTTGGACATGTGT+TGG | 0.444418 | 8.3:-24612587 | MS.gene87325:CDS |
| ATCTCCGCCTCCGACGGAAC+CGG | 0.449439 | 8.3:-24613424 | MS.gene87325:CDS |
| ATCCACCATTCAAGCTCCTC+CGG | 0.449666 | 8.3:+24613043 | None:intergenic |
| ATTGCTGAAGGGGAGGATGA+AGG | 0.452826 | 8.3:-24613130 | MS.gene87325:CDS |
| GCGCTATTTGGACATGTGTT+GGG | 0.453371 | 8.3:-24612586 | MS.gene87325:CDS |
| TCTGTTGAGCTTGGTCCGGT+TGG | 0.454918 | 8.3:-24613202 | MS.gene87325:CDS |
| ATGTTGTGATTGCTGATTGT+GGG | 0.460587 | 8.3:-24613156 | MS.gene87325:CDS |
| GGCTTGGTATCAAGATCAAC+AGG | 0.465685 | 8.3:+24613064 | None:intergenic |
| GGAAGATGGAGTTCTTGAAA+TGG | 0.467050 | 8.3:+24613485 | None:intergenic |
| AGCTCTGTTTCGCAAAGGCC+AGG | 0.474119 | 8.3:-24611577 | MS.gene87325:intron |
| TGTTGAGCTTGGTCCGGTTG+GGG | 0.477465 | 8.3:-24613200 | MS.gene87325:CDS |
| GTTGTTAGGTCTGTTGAGCT+TGG | 0.477926 | 8.3:-24613211 | MS.gene87325:CDS |
| TCGAAGTACACTCTTGGGTT+CGG | 0.485037 | 8.3:+24613643 | None:intergenic |
| CTTATGTCGAAGTACACTCT+TGG | 0.486685 | 8.3:+24613637 | None:intergenic |
| CCAAGCCGGAGGAGCTTGAA+TGG | 0.487486 | 8.3:-24613048 | MS.gene87325:CDS |
| ATCTTCCACCGTGTCGTCAA+AGG | 0.488625 | 8.3:-24613469 | MS.gene87325:CDS |
| TCAAATCTTTACCAACAGTT+CGG | 0.490310 | 8.3:-24612389 | MS.gene87325:intron |
| GGTTGCTGATAGACATGATA+AGG | 0.494242 | 8.3:-24608437 | MS.gene87325:CDS |
| AGCTATCCAGAGCGGCATCC+AGG | 0.495882 | 8.3:+24609246 | None:intergenic |
| TGCTGAAGGGGAGGATGAAG+GGG | 0.498218 | 8.3:-24613128 | MS.gene87325:CDS |
| GGTCGATCATTCTCCCCAAC+CGG | 0.499007 | 8.3:+24613187 | None:intergenic |
| TGACTCGCCGCCGGTTCCGT+CGG | 0.502311 | 8.3:+24613414 | None:intergenic |
| GGAGAATGATCGACCGGAGC+AGG | 0.502619 | 8.3:-24613179 | MS.gene87325:CDS |
| TTATGTCGAAGTACACTCTT+GGG | 0.506372 | 8.3:+24613638 | None:intergenic |
| ACGAGGACGCCACATTTGGA+TGG | 0.506626 | 8.3:-24613274 | MS.gene87325:CDS |
| CCATTCAAGCTCCTCCGGCT+TGG | 0.508001 | 8.3:+24613048 | None:intergenic |
| TTTCGCCGGTGCAGAGAGAT+CGG | 0.511855 | 8.3:+24613539 | None:intergenic |
| GCCGCCGGTTCCGTCGGAGG+CGG | 0.516656 | 8.3:+24613420 | None:intergenic |
| TTTGACGACACGGTGGAAGA+TGG | 0.517502 | 8.3:+24613471 | None:intergenic |
| AGGCGGAGATGTCACCGCCT+TGG | 0.518147 | 8.3:+24613437 | None:intergenic |
| ATACCGGTCCAAACACCAAT+GGG | 0.522499 | 8.3:-24613318 | MS.gene87325:CDS |
| TTAGAGTTGGAGCCAAATGA+TGG | 0.524064 | 8.3:-24609212 | MS.gene87325:intron |
| CTTCAAGAGAGCATTAGAGT+TGG | 0.526509 | 8.3:-24609225 | MS.gene87325:CDS |
| AAGCATCGGCGGTGAACTCG+AGG | 0.527582 | 8.3:-24613617 | MS.gene87325:CDS |
| TAGGTCTGTTGAGCTTGGTC+CGG | 0.531881 | 8.3:-24613206 | MS.gene87325:CDS |
| ACTCCCATTGGTGTTTGGAC+CGG | 0.534347 | 8.3:+24613315 | None:intergenic |
| TTGTGGGGAGATTGCTGAAG+GGG | 0.543269 | 8.3:-24613140 | MS.gene87325:CDS |
| GATGTTGTGATTGCTGATTG+TGG | 0.548690 | 8.3:-24613157 | MS.gene87325:CDS |
| CTCGCCGCCGGTTCCGTCGG+AGG | 0.551251 | 8.3:+24613417 | None:intergenic |
| GCAATCACAACATCCTGCTC+CGG | 0.552793 | 8.3:+24613166 | None:intergenic |
| ACAGAAGCAAGATTATAAGA+TGG | 0.553869 | 8.3:-24612634 | MS.gene87325:intron |
| ACCGTAGATTGACTCGCCGC+CGG | 0.554056 | 8.3:+24613405 | None:intergenic |
| TGGGGAGATTGCTGAAGGGG+AGG | 0.554625 | 8.3:-24613137 | MS.gene87325:CDS |
| TTTGGACATGTGTTGGGAGA+AGG | 0.556697 | 8.3:-24612580 | MS.gene87325:CDS |
| GACCTAAAACACGAACGGAA+AGG | 0.557928 | 8.3:-24613358 | MS.gene87325:CDS |
| GTACGCAATTGCCAGGAAGA+AGG | 0.562491 | 8.3:-24608554 | MS.gene87325:intron |
| GTTTGGACCGGTATTCGCCA+TGG | 0.566119 | 8.3:+24613327 | None:intergenic |
| ACCGGCGGCGAGTCAATCTA+CGG | 0.568908 | 8.3:-24613406 | MS.gene87325:CDS |
| AATGCTGTTGAATCTATCAA+AGG | 0.572471 | 8.3:-24613019 | MS.gene87325:CDS |
| GTCAAAGGCTTCATGATCCA+AGG | 0.574138 | 8.3:-24613454 | MS.gene87325:CDS |
| TGTGATACTTACCGAACTGT+TGG | 0.579721 | 8.3:+24612378 | None:intergenic |
| TCCGCCTCCGACGGAACCGG+CGG | 0.580073 | 8.3:-24613421 | MS.gene87325:CDS |
| GGTGACATCTCCGCCTCCGA+CGG | 0.583678 | 8.3:-24613430 | MS.gene87325:CDS |
| GATTGTGGGGAGATTGCTGA+AGG | 0.584654 | 8.3:-24613142 | MS.gene87325:CDS |
| GTGTTTGGGAAAGTTGTGAA+AGG | 0.592363 | 8.3:-24613241 | MS.gene87325:CDS |
| CTTGAAATGGAGAGGGACGT+TGG | 0.592824 | 8.3:+24613498 | None:intergenic |
| TGTTTGGGAAAGTTGTGAAA+GGG | 0.601236 | 8.3:-24613240 | MS.gene87325:CDS |
| ATGGAGTTCTTGAAATGGAG+AGG | 0.601662 | 8.3:+24613490 | None:intergenic |
| CGAGGACGCCACATTTGGAT+GGG | 0.607379 | 8.3:-24613273 | MS.gene87325:CDS |
| GGTTGGGGAGAATGATCGAC+CGG | 0.607475 | 8.3:-24613185 | MS.gene87325:CDS |
| TGGAGTTCTTGAAATGGAGA+GGG | 0.613006 | 8.3:+24613491 | None:intergenic |
| GACATGTGTTGGGAGAAGGA+TGG | 0.614412 | 8.3:-24612576 | MS.gene87325:CDS |
| AGCATCGGCGGTGAACTCGA+GGG | 0.617751 | 8.3:-24613616 | MS.gene87325:CDS |
| TCATGAAGCCTTTGACGACA+CGG | 0.625678 | 8.3:+24613461 | None:intergenic |
| TGTTGATCTTGATACCAAGC+CGG | 0.625762 | 8.3:-24613062 | MS.gene87325:CDS |
| ACATGCTTCCCATCCAAATG+TGG | 0.626405 | 8.3:+24613265 | None:intergenic |
| AATACCGGTCCAAACACCAA+TGG | 0.627525 | 8.3:-24613319 | MS.gene87325:CDS |
| TGTTGTGATTGCTGATTGTG+GGG | 0.627931 | 8.3:-24613155 | MS.gene87325:CDS |
| AGCCGGAGGAGCTTGAATGG+TGG | 0.631915 | 8.3:-24613045 | MS.gene87325:CDS |
| AATTTCCGATCTCTCTGCAC+CGG | 0.632806 | 8.3:-24613544 | MS.gene87325:CDS |
| ATTTCGACCTAAAACACGAA+CGG | 0.634503 | 8.3:-24613363 | MS.gene87325:CDS |
| TCGGACTTTGCAATGCACGA+TGG | 0.636187 | 8.3:-24611612 | MS.gene87325:CDS |
| ATTGTGGGGAGATTGCTGAA+GGG | 0.637501 | 8.3:-24613141 | MS.gene87325:CDS |
| TGGAGAGGGACGTTGGTGTG+TGG | 0.640483 | 8.3:+24613505 | None:intergenic |
| GTATATGTTACTCAATGACC+TGG | 0.641203 | 8.3:-24609264 | MS.gene87325:CDS |
| GCAAAAGCTCTGTTTCGCAA+AGG | 0.644842 | 8.3:-24611582 | MS.gene87325:CDS |
| GTGTACTTCGACATAAGCAT+CGG | 0.649168 | 8.3:-24613631 | MS.gene87325:CDS |
| GAGAAGGATGGTGTTGACCA+AGG | 0.659869 | 8.3:-24612564 | MS.gene87325:intron |
| TACTTCGACATAAGCATCGG+CGG | 0.673491 | 8.3:-24613628 | MS.gene87325:CDS |
| TGATCTTGATACCAAGCCGG+AGG | 0.689161 | 8.3:-24613059 | MS.gene87325:CDS |
| TTAAAATTAGGTGACCTCAG+TGG | 0.703190 | 8.3:-24611648 | MS.gene87325:CDS |
| ACATTTGGATGGGAAGCATG+TGG | 0.722286 | 8.3:-24613263 | MS.gene87325:CDS |
| TGAAGCCTTTGACGACACGG+TGG | 0.743535 | 8.3:+24613464 | None:intergenic |
| TCTCTTGAAGCTATCCAGAG+CGG | 0.756413 | 8.3:+24609238 | None:intergenic |
| AAAGGCTTCATGATCCAAGG+CGG | 0.764461 | 8.3:-24613451 | MS.gene87325:CDS |
| AATCAAGTAAAGCTCCACTG+AGG | 0.768633 | 8.3:+24611634 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTACTATATATAATACA+TGG | + | chr8.3:24612734-24612753 | None:intergenic | 10.0% |
| !! | AATAGAAAATATATATAACT+AGG | - | chr8.3:24611887-24611906 | MS.gene87325:intron | 10.0% |
| !! | ATAGAAAATATATATAACTA+GGG | - | chr8.3:24611888-24611907 | MS.gene87325:intron | 10.0% |
| !!! | TTAATGTTTTAGTTTTATTT+GGG | - | chr8.3:24609316-24609335 | MS.gene87325:intron | 10.0% |
| !!! | TTACTTTTGTTTATATTATA+TGG | + | chr8.3:24611660-24611679 | None:intergenic | 10.0% |
| !!! | TTTCTAATTTGTTTATTATA+TGG | + | chr8.3:24611397-24611416 | None:intergenic | 10.0% |
| !!! | TTTTTTATCATTATAACAAT+AGG | - | chr8.3:24611245-24611264 | MS.gene87325:intron | 10.0% |
| !! | AACTTTATTAAAATTGTGTT+TGG | - | chr8.3:24612137-24612156 | MS.gene87325:intron | 15.0% |
| !! | AATGATAAAAAAATAGTGAT+AGG | + | chr8.3:24611237-24611256 | None:intergenic | 15.0% |
| !! | TGACAAACTAAAATATAATA+TGG | - | chr8.3:24611476-24611495 | MS.gene87325:intron | 15.0% |
| !!! | CTTAATGTTTTAGTTTTATT+TGG | - | chr8.3:24609315-24609334 | MS.gene87325:intron | 15.0% |
| !!! | GTTATTAACTTTTTTAAAGA+TGG | - | chr8.3:24608945-24608964 | MS.gene87325:intron | 15.0% |
| !!! | TAAATGTGAATTAAATTTTC+AGG | - | chr8.3:24610372-24610391 | MS.gene87325:intron | 15.0% |
| !!! | TTAACTTAAAAGTACTAATT+CGG | + | chr8.3:24610713-24610732 | None:intergenic | 15.0% |
| !! | AAAACTGAATGATCATATAA+AGG | - | chr8.3:24611735-24611754 | MS.gene87325:intron | 20.0% |
| !! | AAACTGAATGATCATATAAA+GGG | - | chr8.3:24611736-24611755 | MS.gene87325:intron | 20.0% |
| !! | AAATTGACAAAAAGTTTAAG+GGG | - | chr8.3:24612405-24612424 | MS.gene87325:CDS | 20.0% |
| !! | AAGTATTTGTAAAGAAAACA+TGG | + | chr8.3:24610138-24610157 | None:intergenic | 20.0% |
| !! | AAGTTGAAGTTAAAGTTATT+TGG | - | chr8.3:24610668-24610687 | MS.gene87325:intron | 20.0% |
| !! | AATTACTTTCTTATAACACT+GGG | - | chr8.3:24612949-24612968 | MS.gene87325:intron | 20.0% |
| !! | ACAAATTGACAAAAAGTTTA+AGG | - | chr8.3:24612403-24612422 | MS.gene87325:CDS | 20.0% |
| !! | AGTATTTGTAAAGAAAACAT+GGG | + | chr8.3:24610137-24610156 | None:intergenic | 20.0% |
| !! | CAAATTGACAAAAAGTTTAA+GGG | - | chr8.3:24612404-24612423 | MS.gene87325:CDS | 20.0% |
| !! | TAAAGTAGCAAATTACAATT+CGG | + | chr8.3:24612498-24612517 | None:intergenic | 20.0% |
| !! | TATACATATACATGATCATA+TGG | + | chr8.3:24611329-24611348 | None:intergenic | 20.0% |
| !! | TCATTTGGTCTAAAAAAATT+AGG | + | chr8.3:24610842-24610861 | None:intergenic | 20.0% |
| !! | TGATATATTATTGAATGACA+AGG | - | chr8.3:24611436-24611455 | MS.gene87325:intron | 20.0% |
| !! | TTCATATAGAAACATATCTT+TGG | - | chr8.3:24613043-24613062 | MS.gene87325:CDS | 20.0% |
| !!! | ATAATTTAAGAGTACATGAT+GGG | + | chr8.3:24611021-24611040 | None:intergenic | 20.0% |
| !!! | ATGTGTTATGTTTCTAATAT+TGG | + | chr8.3:24610927-24610946 | None:intergenic | 20.0% |
| !!! | ATTATTATTTTTGGCAAAGT+TGG | + | chr8.3:24611962-24611981 | None:intergenic | 20.0% |
| !!! | CAAAGTTAATTTGATATTTC+TGG | - | chr8.3:24613424-24613443 | MS.gene87325:CDS | 20.0% |
| !!! | GTAATTTGCTATTTGTTTTT+TGG | - | chr8.3:24612747-24612766 | MS.gene87325:intron | 20.0% |
| !!! | TATAATTTAAGAGTACATGA+TGG | + | chr8.3:24611022-24611041 | None:intergenic | 20.0% |
| !!! | TCATGTTTTGTAAATTTAGT+TGG | - | chr8.3:24610035-24610054 | MS.gene87325:intron | 20.0% |
| !!! | TTTTAGACCTAAAAAAAGTA+GGG | + | chr8.3:24610612-24610631 | None:intergenic | 20.0% |
| ! | AATAATCGAAAACAACAATG+AGG | + | chr8.3:24609160-24609179 | None:intergenic | 25.0% |
| ! | ACTAAAACATTAAGCTTACA+TGG | + | chr8.3:24609309-24609328 | None:intergenic | 25.0% |
| ! | AGCAATCAATTATTGAAAGT+CGG | + | chr8.3:24609888-24609907 | None:intergenic | 25.0% |
| ! | AGTCAAAACCATCAAATTTA+TGG | - | chr8.3:24612551-24612570 | MS.gene87325:intron | 25.0% |
| ! | ATAAGGTGAATTTCAAAGAA+TGG | - | chr8.3:24609072-24609091 | MS.gene87325:intron | 25.0% |
| ! | ATAGATGACATTGTTAAACA+CGG | + | chr8.3:24610548-24610567 | None:intergenic | 25.0% |
| ! | ATGTTTCATTTCATACACAA+AGG | + | chr8.3:24613334-24613353 | None:intergenic | 25.0% |
| ! | ATTACTTTCTTATAACACTG+GGG | - | chr8.3:24612950-24612969 | MS.gene87325:intron | 25.0% |
| ! | ATTTCATGTTGAATTGATTG+TGG | + | chr8.3:24613246-24613265 | None:intergenic | 25.0% |
| ! | CAAAAATGCAGAAAAAATGA+TGG | - | chr8.3:24611934-24611953 | MS.gene87325:intron | 25.0% |
| ! | CAAAGAATGGTTATAGAATA+GGG | - | chr8.3:24609085-24609104 | MS.gene87325:intron | 25.0% |
| ! | CAATTACTTTCTTATAACAC+TGG | - | chr8.3:24612948-24612967 | MS.gene87325:intron | 25.0% |
| ! | CTATATATAATACATGGCTA+TGG | + | chr8.3:24612728-24612747 | None:intergenic | 25.0% |
| ! | GATAAAAAAATAGTGATAGG+TGG | + | chr8.3:24611234-24611253 | None:intergenic | 25.0% |
| ! | GATTAAAGACAACAATGAAA+GGG | + | chr8.3:24613161-24613180 | None:intergenic | 25.0% |
| ! | GATTTCGTTACTTACTTATA+TGG | + | chr8.3:24611375-24611394 | None:intergenic | 25.0% |
| ! | GTCAAAACCATCAAATTTAT+GGG | - | chr8.3:24612552-24612571 | MS.gene87325:intron | 25.0% |
| ! | TAAGATGAGAAAATGAACTT+TGG | + | chr8.3:24612055-24612074 | None:intergenic | 25.0% |
| ! | TACAAATACTTACTCTCTTA+GGG | - | chr8.3:24610147-24610166 | MS.gene87325:intron | 25.0% |
| ! | TAGTAAAATAGTCATTCACA+AGG | + | chr8.3:24610108-24610127 | None:intergenic | 25.0% |
| ! | TCAAAGAATGGTTATAGAAT+AGG | - | chr8.3:24609084-24609103 | MS.gene87325:intron | 25.0% |
| ! | TGATTAAAGACAACAATGAA+AGG | + | chr8.3:24613162-24613181 | None:intergenic | 25.0% |
| ! | TTAACAAGTCAAAGTGTAAA+TGG | - | chr8.3:24613280-24613299 | MS.gene87325:CDS | 25.0% |
| ! | TTACAAATACTTACTCTCTT+AGG | - | chr8.3:24610146-24610165 | MS.gene87325:intron | 25.0% |
| ! | TTGATGCATATCTTTGTTAA+AGG | - | chr8.3:24609128-24609147 | MS.gene87325:intron | 25.0% |
| !! | AAAATCATGAGAAGAGTTTT+AGG | + | chr8.3:24609842-24609861 | None:intergenic | 25.0% |
| !! | AAATTTTCGTCTTCGAAATT+TGG | + | chr8.3:24608672-24608691 | None:intergenic | 25.0% |
| !! | CTTTTAGACCTAAAAAAAGT+AGG | + | chr8.3:24610613-24610632 | None:intergenic | 25.0% |
| !! | TTTATTCTGTTTACTGCTTT+TGG | - | chr8.3:24613586-24613605 | MS.gene87325:CDS | 25.0% |
| !!! | AAGACTTTAGTTTTGGAAAT+TGG | - | chr8.3:24609952-24609971 | MS.gene87325:intron | 25.0% |
| !!! | AATTTGATGGTTTTGACTTT+TGG | + | chr8.3:24612549-24612568 | None:intergenic | 25.0% |
| !!! | AGACTTTAGTTTTGGAAATT+GGG | - | chr8.3:24609953-24609972 | MS.gene87325:intron | 25.0% |
| !!! | AGTTTTATTTGGGAATATAG+TGG | - | chr8.3:24609326-24609345 | MS.gene87325:intron | 25.0% |
| !!! | GTCACCTAATTTTAATTTAC+AGG | + | chr8.3:24610398-24610417 | None:intergenic | 25.0% |
| !!! | TCATTTTTTCTGCATTTTTG+AGG | + | chr8.3:24611934-24611953 | None:intergenic | 25.0% |
| !!! | TGTCTTTTTTTTTGCAAAGA+AGG | + | chr8.3:24612103-24612122 | None:intergenic | 25.0% |
| AAGTTAAGTGGAAATTAAGC+AGG | - | chr8.3:24612182-24612201 | MS.gene87325:intron | 30.0% | |
| AATGCTGTTGAATCTATCAA+AGG | - | chr8.3:24609032-24609051 | MS.gene87325:intron | 30.0% | |
| AATTGTTTAATAGGGAGGAA+AGG | - | chr8.3:24612343-24612362 | MS.gene87325:intron | 30.0% | |
| AATTTGTACCAAGATGGATA+GGG | + | chr8.3:24612390-24612409 | None:intergenic | 30.0% | |
| ACAGAAGCAAGATTATAAGA+TGG | - | chr8.3:24609417-24609436 | MS.gene87325:intron | 30.0% | |
| ACCAAATAAAAGATACACAC+TGG | + | chr8.3:24609189-24609208 | None:intergenic | 30.0% | |
| AGAAAAACAGTAAGTAACCA+CGG | + | chr8.3:24609568-24609587 | None:intergenic | 30.0% | |
| AGAATGTGACACATTATAAC+AGG | + | chr8.3:24610315-24610334 | None:intergenic | 30.0% | |
| AGAGTTTCAATAGAGAAAGT+AGG | - | chr8.3:24610512-24610531 | MS.gene87325:intron | 30.0% | |
| AGTTAAGTGGAAATTAAGCA+GGG | - | chr8.3:24612183-24612202 | MS.gene87325:intron | 30.0% | |
| ATAACTATAACCAGTCATAG+GGG | - | chr8.3:24612672-24612691 | MS.gene87325:intron | 30.0% | |
| ATATAATATGGACTCCACTT+TGG | - | chr8.3:24611488-24611507 | MS.gene87325:intron | 30.0% | |
| ATTGAGATCCAAAACATCTT+TGG | - | chr8.3:24613364-24613383 | MS.gene87325:CDS | 30.0% | |
| ATTGTTTAATAGGGAGGAAA+GGG | - | chr8.3:24612344-24612363 | MS.gene87325:intron | 30.0% | |
| CAAATAAAAGATACACACTG+GGG | + | chr8.3:24609187-24609206 | None:intergenic | 30.0% | |
| CAGGCCTGTAAATTAAAATT+AGG | - | chr8.3:24610391-24610410 | MS.gene87325:intron | 30.0% | |
| CATAACTTCATTCGAATATG+TGG | + | chr8.3:24611139-24611158 | None:intergenic | 30.0% | |
| CCAAATAAAAGATACACACT+GGG | + | chr8.3:24609188-24609207 | None:intergenic | 30.0% | |
| CTGGTGTGAATTGTTTAATA+GGG | - | chr8.3:24612335-24612354 | MS.gene87325:intron | 30.0% | |
| GAAATGGTAAAGGAAGAAAA+AGG | + | chr8.3:24613534-24613553 | None:intergenic | 30.0% | |
| GATAACTATAACCAGTCATA+GGG | - | chr8.3:24612671-24612690 | MS.gene87325:intron | 30.0% | |
| GTCAAAGTGTAAATGGAATT+AGG | - | chr8.3:24613287-24613306 | MS.gene87325:CDS | 30.0% | |
| TAAAATAGTCATTCACAAGG+TGG | + | chr8.3:24610105-24610124 | None:intergenic | 30.0% | |
| TAATCAGCAGATCATAAGAA+TGG | + | chr8.3:24609362-24609381 | None:intergenic | 30.0% | |
| TCAAATCTTTACCAACAGTT+CGG | - | chr8.3:24609662-24609681 | MS.gene87325:intron | 30.0% | |
| TCTTAGAAGTAGAAGTTAAG+TGG | - | chr8.3:24612170-24612189 | MS.gene87325:intron | 30.0% | |
| TGATAACTATAACCAGTCAT+AGG | - | chr8.3:24612670-24612689 | MS.gene87325:intron | 30.0% | |
| TTACAATTCGGTACTTAAGA+AGG | + | chr8.3:24612486-24612505 | None:intergenic | 30.0% | |
| TTAGAAAGCTAGTAGACAAA+AGG | - | chr8.3:24611410-24611429 | MS.gene87325:intron | 30.0% | |
| TTATAACAATAGGCCTAACA+CGG | - | chr8.3:24611255-24611274 | MS.gene87325:intron | 30.0% | |
| TTCTTTAGTAACTCATCTCT+TGG | - | chr8.3:24609587-24609606 | MS.gene87325:intron | 30.0% | |
| TTGAGTGTAATGAATTTCCT+GGG | - | chr8.3:24612991-24613010 | MS.gene87325:intron | 30.0% | |
| TTTATTTCATTCATTGCCTG+TGG | - | chr8.3:24612889-24612908 | MS.gene87325:intron | 30.0% | |
| TTTGTCAATTTGTACCAAGA+TGG | + | chr8.3:24612396-24612415 | None:intergenic | 30.0% | |
| ! | AAAGAATATATGGCTTGTAC+CGG | - | chr8.3:24611987-24612006 | MS.gene87325:intron | 30.0% |
| ! | AATAAAAAACTGACTCCCAT+TGG | + | chr8.3:24608751-24608770 | None:intergenic | 30.0% |
| ! | CATAGAACTTTTATGCTACT+AGG | - | chr8.3:24612270-24612289 | MS.gene87325:intron | 30.0% |
| ! | CTTTGGAAATGAACACTATA+AGG | - | chr8.3:24609055-24609074 | MS.gene87325:intron | 30.0% |
| ! | GTCATAATCCAAAGATGTTT+TGG | + | chr8.3:24613375-24613394 | None:intergenic | 30.0% |
| ! | GTCATCATTTTATGTGACTA+GGG | - | chr8.3:24609698-24609717 | MS.gene87325:intron | 30.0% |
| ! | TGTCATCATTTTATGTGACT+AGG | - | chr8.3:24609697-24609716 | MS.gene87325:intron | 30.0% |
| ! | TTCTACTTCTAAGAAGAAGT+GGG | + | chr8.3:24612164-24612183 | None:intergenic | 30.0% |
| !! | ATCTTTTCTTGTTTGATCAG+TGG | - | chr8.3:24611181-24611200 | MS.gene87325:intron | 30.0% |
| !! | TGCATTCAAGACTTTAGTTT+TGG | - | chr8.3:24609945-24609964 | MS.gene87325:intron | 30.0% |
| !! | TTAGTTTTCCAACATCTTAG+TGG | - | chr8.3:24610964-24610983 | MS.gene87325:intron | 30.0% |
| !! | TTTTTGGTCTGCTTAATTTC+AGG | - | chr8.3:24612763-24612782 | MS.gene87325:intron | 30.0% |
| AACTACACAACTAAAGCTTG+TGG | + | chr8.3:24609796-24609815 | None:intergenic | 35.0% | |
| AATAGTCACCAACCATCATT+TGG | + | chr8.3:24612854-24612873 | None:intergenic | 35.0% | |
| ATCAATTATTGAAAGTCGGC+TGG | + | chr8.3:24609884-24609903 | None:intergenic | 35.0% | |
| ATTGTGGAAATGATGTGACT+TGG | + | chr8.3:24613230-24613249 | None:intergenic | 35.0% | |
| ATTTCGACCTAAAACACGAA+CGG | - | chr8.3:24608688-24608707 | MS.gene87325:intron | 35.0% | |
| CAATTTGTACCAAGATGGAT+AGG | + | chr8.3:24612391-24612410 | None:intergenic | 35.0% | |
| CAGACTTCCCATAAATTTGA+TGG | + | chr8.3:24612562-24612581 | None:intergenic | 35.0% | |
| CATACAGTCATATTGTATGC+TGG | - | chr8.3:24612316-24612335 | MS.gene87325:intron | 35.0% | |
| GAACAAGACAGCATTTGAAA+TGG | + | chr8.3:24613550-24613569 | None:intergenic | 35.0% | |
| GAAGGAGTCTATTCATGATA+AGG | - | chr8.3:24613078-24613097 | MS.gene87325:CDS | 35.0% | |
| GACAAAAAGTTTAAGGGGAA+GGG | - | chr8.3:24612410-24612429 | MS.gene87325:CDS | 35.0% | |
| GACTTGTCTCATCAACTATT+AGG | - | chr8.3:24609729-24609748 | MS.gene87325:intron | 35.0% | |
| GCATACAATATGACTGTATG+AGG | + | chr8.3:24612316-24612335 | None:intergenic | 35.0% | |
| GCTGGTGTGAATTGTTTAAT+AGG | - | chr8.3:24612334-24612353 | MS.gene87325:intron | 35.0% | |
| GGTTATAGTTATCAATTCCC+TGG | + | chr8.3:24612664-24612683 | None:intergenic | 35.0% | |
| GTATATGTTACTCAATGACC+TGG | - | chr8.3:24612787-24612806 | MS.gene87325:intron | 35.0% | |
| GTGTGAATTGTTTAATAGGG+AGG | - | chr8.3:24612338-24612357 | MS.gene87325:intron | 35.0% | |
| GTTGAATCTATCAAAGGCTT+TGG | - | chr8.3:24609038-24609057 | MS.gene87325:intron | 35.0% | |
| GTTGAGTGTAATGAATTTCC+TGG | - | chr8.3:24612990-24613009 | MS.gene87325:intron | 35.0% | |
| GTTTCTTTCTTCTTCTCGTT+CGG | - | chr8.3:24611063-24611082 | MS.gene87325:intron | 35.0% | |
| TAGGTCTGCATGATTCAAAA+TGG | - | chr8.3:24610268-24610287 | MS.gene87325:intron | 35.0% | |
| TATAACAATAGGCCTAACAC+GGG | - | chr8.3:24611256-24611275 | MS.gene87325:intron | 35.0% | |
| TCAAATAGCCACTAAGATGT+TGG | + | chr8.3:24610975-24610994 | None:intergenic | 35.0% | |
| TGACAAAAAGTTTAAGGGGA+AGG | - | chr8.3:24612409-24612428 | MS.gene87325:CDS | 35.0% | |
| TGTTTGGGAAAGTTGTGAAA+GGG | - | chr8.3:24608811-24608830 | MS.gene87325:intron | 35.0% | |
| TTAAAATTAGGTGACCTCAG+TGG | - | chr8.3:24610403-24610422 | MS.gene87325:intron | 35.0% | |
| TTATGTCGAAGTACACTCTT+GGG | + | chr8.3:24608416-24608435 | None:intergenic | 35.0% | |
| TTCTGTAAGAAAAAGGGGAA+GGG | + | chr8.3:24612633-24612652 | None:intergenic | 35.0% | |
| TTTCTTTCTTCTTCTCGTTC+GGG | - | chr8.3:24611064-24611083 | MS.gene87325:intron | 35.0% | |
| ! | AAACATATCTTTGGCTTACC+AGG | - | chr8.3:24613052-24613071 | MS.gene87325:CDS | 35.0% |
| ! | AACATATCTTTGGCTTACCA+GGG | - | chr8.3:24613053-24613072 | MS.gene87325:CDS | 35.0% |
| ! | ACTATTTCTTGTCTCGACAT+CGG | + | chr8.3:24613105-24613124 | None:intergenic | 35.0% |
| ! | AGCTTTAGTTGTGTAGTTAG+AGG | - | chr8.3:24609798-24609817 | MS.gene87325:intron | 35.0% |
| ! | ATGGTGATACTTTTGCTGAT+TGG | - | chr8.3:24608964-24608983 | MS.gene87325:intron | 35.0% |
| ! | ATGTTGTGATTGCTGATTGT+GGG | - | chr8.3:24608895-24608914 | MS.gene87325:intron | 35.0% |
| ! | ATTTTATCCATGGCGAATAC+CGG | - | chr8.3:24608717-24608736 | MS.gene87325:intron | 35.0% |
| ! | CCCAGTGTGTATCTTTTATT+TGG | - | chr8.3:24609185-24609204 | MS.gene87325:intron | 35.0% |
| ! | CTTCTACTTCTAAGAAGAAG+TGG | + | chr8.3:24612165-24612184 | None:intergenic | 35.0% |
| ! | CTTTTATTCTGTCAGTCTGA+GGG | - | chr8.3:24610577-24610596 | MS.gene87325:intron | 35.0% |
| ! | GACAGCATTTGAAATGGTAA+AGG | + | chr8.3:24613544-24613563 | None:intergenic | 35.0% |
| ! | TCTACTTCTAAGAAGAAGTG+GGG | + | chr8.3:24612163-24612182 | None:intergenic | 35.0% |
| ! | TCTTGTTTGATCAGTGGAAA+TGG | - | chr8.3:24611187-24611206 | MS.gene87325:intron | 35.0% |
| ! | TCTTTTATTCTGTCAGTCTG+AGG | - | chr8.3:24610576-24610595 | MS.gene87325:intron | 35.0% |
| !! | GATCTGTGCTATTCTGTTTT+TGG | - | chr8.3:24609536-24609555 | MS.gene87325:intron | 35.0% |
| !! | TGAAAAGCATTTATGACCAC+AGG | + | chr8.3:24612908-24612927 | None:intergenic | 35.0% |
| !! | TGTTTACTGCTTTTGGTTAC+AGG | - | chr8.3:24613593-24613612 | MS.gene87325:CDS | 35.0% |
| !!! | AGTTTTTTATTACGACGACG+AGG | - | chr8.3:24608760-24608779 | MS.gene87325:intron | 35.0% |
| !!! | TTGATGGTTTTGACTTTTGG+AGG | + | chr8.3:24612546-24612565 | None:intergenic | 35.0% |
| AAGACAACAATGAAAGGGTG+AGG | + | chr8.3:24613156-24613175 | None:intergenic | 40.0% | |
| AAGACGGGGAATTCAACAAA+TGG | + | chr8.3:24611111-24611130 | None:intergenic | 40.0% | |
| AAGCAGACCTACTCAGAAAA+GGG | + | chr8.3:24610240-24610259 | None:intergenic | 40.0% | |
| AATCAAGTAAAGCTCCACTG+AGG | + | chr8.3:24610420-24610439 | None:intergenic | 40.0% | |
| AATGCATCAGCATACCACAA+AGG | + | chr8.3:24609385-24609404 | None:intergenic | 40.0% | |
| ACCTAAAACACGAACGGAAA+GGG | - | chr8.3:24608694-24608713 | MS.gene87325:intron | 40.0% | |
| AGACAACAATGAAAGGGTGA+GGG | + | chr8.3:24613155-24613174 | None:intergenic | 40.0% | |
| AGACGGGGAATTCAACAAAT+GGG | + | chr8.3:24611110-24611129 | None:intergenic | 40.0% | |
| AGGAAAGGGTAAGGAAAAGA+AGG | - | chr8.3:24612358-24612377 | MS.gene87325:intron | 40.0% | |
| AGTGATATTCATCCCGTGTT+AGG | + | chr8.3:24611271-24611290 | None:intergenic | 40.0% | |
| AGTTATCAATTCCCTGGTCT+GGG | + | chr8.3:24612658-24612677 | None:intergenic | 40.0% | |
| ATAGTCATTCACAAGGTGGT+AGG | + | chr8.3:24610101-24610120 | None:intergenic | 40.0% | |
| ATGGAGTTCTTGAAATGGAG+AGG | + | chr8.3:24608564-24608583 | None:intergenic | 40.0% | |
| CAGTGGAGCTTTACTTGATT+CGG | - | chr8.3:24610420-24610439 | MS.gene87325:intron | 40.0% | |
| CATGATATATCCCCTATGAC+TGG | + | chr8.3:24612685-24612704 | None:intergenic | 40.0% | |
| CGTTTGTAAATCGTCCTGTT+CGG | - | chr8.3:24613191-24613210 | MS.gene87325:CDS | 40.0% | |
| CTTATGTCGAAGTACACTCT+TGG | + | chr8.3:24608417-24608436 | None:intergenic | 40.0% | |
| GGAAAGGGTAAGGAAAAGAA+GGG | - | chr8.3:24612359-24612378 | MS.gene87325:intron | 40.0% | |
| GGAAGATGGAGTTCTTGAAA+TGG | + | chr8.3:24608569-24608588 | None:intergenic | 40.0% | |
| GGGTTCTTGATAAAGCTGTA+AGG | - | chr8.3:24613011-24613030 | MS.gene87325:CDS | 40.0% | |
| GGTTGCTGATAGACATGATA+AGG | - | chr8.3:24613614-24613633 | MS.gene87325:CDS | 40.0% | |
| GTGTACTTCGACATAAGCAT+CGG | - | chr8.3:24608420-24608439 | MS.gene87325:CDS | 40.0% | |
| GTGTTTGGGAAAGTTGTGAA+AGG | - | chr8.3:24608810-24608829 | MS.gene87325:intron | 40.0% | |
| GTTCTGTAAGAAAAAGGGGA+AGG | + | chr8.3:24612634-24612653 | None:intergenic | 40.0% | |
| GTTTGTAAATCGTCCTGTTC+GGG | - | chr8.3:24613192-24613211 | MS.gene87325:CDS | 40.0% | |
| TAAGAAAAAGGGGAAGGGAA+TGG | + | chr8.3:24612628-24612647 | None:intergenic | 40.0% | |
| TAGGTCTGCTTCATTCAACT+AGG | - | chr8.3:24610249-24610268 | MS.gene87325:intron | 40.0% | |
| TAGTTATCAATTCCCTGGTC+TGG | + | chr8.3:24612659-24612678 | None:intergenic | 40.0% | |
| TCTATTGAAAGATGCCAACC+TGG | + | chr8.3:24610495-24610514 | None:intergenic | 40.0% | |
| TGAAAGGGATTGGAGTTGTT+AGG | - | chr8.3:24608826-24608845 | MS.gene87325:intron | 40.0% | |
| TGGAGTTCTTGAAATGGAGA+GGG | + | chr8.3:24608563-24608582 | None:intergenic | 40.0% | |
| TGGGGGTTCTGTAAGAAAAA+GGG | + | chr8.3:24612639-24612658 | None:intergenic | 40.0% | |
| TGTATTACTGACCTTCTTCC+TGG | + | chr8.3:24613511-24613530 | None:intergenic | 40.0% | |
| TGTGATACTTACCGAACTGT+TGG | + | chr8.3:24609676-24609695 | None:intergenic | 40.0% | |
| TGTTGATCTTGATACCAAGC+CGG | - | chr8.3:24608989-24609008 | MS.gene87325:intron | 40.0% | |
| TTAATAGGGAGGAAAGGGTA+AGG | - | chr8.3:24612349-24612368 | MS.gene87325:intron | 40.0% | |
| TTAGAGTTGGAGCCAAATGA+TGG | - | chr8.3:24612839-24612858 | MS.gene87325:intron | 40.0% | |
| ! | AAAAAGAGTACGCAATTGCC+AGG | - | chr8.3:24613490-24613509 | MS.gene87325:CDS | 40.0% |
| ! | ACGGAAAGGGATTTTATCCA+TGG | - | chr8.3:24608707-24608726 | MS.gene87325:intron | 40.0% |
| ! | AGTACATGATGGGAGCTAAA+TGG | + | chr8.3:24611011-24611030 | None:intergenic | 40.0% |
| ! | CTATTTCTTGTCTCGACATC+GGG | + | chr8.3:24613104-24613123 | None:intergenic | 40.0% |
| ! | GATGTTGTGATTGCTGATTG+TGG | - | chr8.3:24608894-24608913 | MS.gene87325:intron | 40.0% |
| ! | GCAGAGAGATCGGAAATTTT+CGG | + | chr8.3:24608505-24608524 | None:intergenic | 40.0% |
| ! | TAACTAGGGTTGTGCAGTTT+TGG | - | chr8.3:24611902-24611921 | MS.gene87325:intron | 40.0% |
| ! | TACAGCTTTATCAAGAACCC+AGG | + | chr8.3:24613011-24613030 | None:intergenic | 40.0% |
| ! | TAGTAGACTCAGAGCTTGTT+TGG | + | chr8.3:24612209-24612228 | None:intergenic | 40.0% |
| ! | TGATCTGCTGATTACCTTTG+TGG | - | chr8.3:24609368-24609387 | MS.gene87325:intron | 40.0% |
| ! | TGTTGTGATTGCTGATTGTG+GGG | - | chr8.3:24608896-24608915 | MS.gene87325:intron | 40.0% |
| !! | CTTCAAGAGAGCATTAGAGT+TGG | - | chr8.3:24612826-24612845 | MS.gene87325:intron | 40.0% |
| !! | GGCTATCAAAAAGTATCGCA+AGG | - | chr8.3:24609438-24609457 | MS.gene87325:intron | 40.0% |
| !! | TGAACTTTGGAGCAACTTCT+CGG | + | chr8.3:24612042-24612061 | None:intergenic | 40.0% |
| !!! | CGTTTGGCCCTACTTTTTTT+AGG | - | chr8.3:24610602-24610621 | MS.gene87325:intron | 40.0% |
| !!! | GGGAATATAGTGGCTAGTTT+TGG | - | chr8.3:24609336-24609355 | MS.gene87325:intron | 40.0% |
| AAACTAACGAGAACCGACCT+TGG | + | chr8.3:24609507-24609526 | None:intergenic | 45.0% | |
| AAAGGCTTCATGATCCAAGG+CGG | - | chr8.3:24608600-24608619 | MS.gene87325:intron | 45.0% | |
| AACAAATGGGACCAAATCCC+TGG | + | chr8.3:24611097-24611116 | None:intergenic | 45.0% | |
| AATACCGGTCCAAACACCAA+TGG | - | chr8.3:24608732-24608751 | MS.gene87325:intron | 45.0% | |
| AATATGTGGCGTTCAAGACG+GGG | + | chr8.3:24611125-24611144 | None:intergenic | 45.0% | |
| AATTTCCGATCTCTCTGCAC+CGG | - | chr8.3:24608507-24608526 | MS.gene87325:intron | 45.0% | |
| ACATGCTTCCCATCCAAATG+TGG | + | chr8.3:24608789-24608808 | None:intergenic | 45.0% | |
| ACCCAAATTGCACACGTGAT+TGG | - | chr8.3:24610011-24610030 | MS.gene87325:intron | 45.0% | |
| AGCCAATCACGTGTGCAATT+TGG | + | chr8.3:24610016-24610035 | None:intergenic | 45.0% | |
| AGTTGGAGCCAAATGATGGT+TGG | - | chr8.3:24612843-24612862 | MS.gene87325:intron | 45.0% | |
| ATACCGGTCCAAACACCAAT+GGG | - | chr8.3:24608733-24608752 | MS.gene87325:intron | 45.0% | |
| ATTGTGGGGAGATTGCTGAA+GGG | - | chr8.3:24608910-24608929 | MS.gene87325:intron | 45.0% | |
| CACCAATGGTACACAAGCTA+TGG | + | chr8.3:24611516-24611535 | None:intergenic | 45.0% | |
| CATACCTTGCTCTGTTCTTC+AGG | - | chr8.3:24613459-24613478 | MS.gene87325:CDS | 45.0% | |
| CCTTGTGCAACTTTCGATTC+CGG | + | chr8.3:24612009-24612028 | None:intergenic | 45.0% | |
| CGAATATGTGGCGTTCAAGA+CGG | + | chr8.3:24611127-24611146 | None:intergenic | 45.0% | |
| CGGAATCGAAAGTTGCACAA+GGG | - | chr8.3:24612007-24612026 | MS.gene87325:intron | 45.0% | |
| CTCTTAGGGCCAAACTAACA+AGG | - | chr8.3:24610161-24610180 | MS.gene87325:intron | 45.0% | |
| CTGGGGGTTCTGTAAGAAAA+AGG | + | chr8.3:24612640-24612659 | None:intergenic | 45.0% | |
| GAAGCAGACCTACTCAGAAA+AGG | + | chr8.3:24610241-24610260 | None:intergenic | 45.0% | |
| GAATATGTGGCGTTCAAGAC+GGG | + | chr8.3:24611126-24611145 | None:intergenic | 45.0% | |
| GACCTAAAACACGAACGGAA+AGG | - | chr8.3:24608693-24608712 | MS.gene87325:intron | 45.0% | |
| GATGCAAGCTATGACACCAA+TGG | + | chr8.3:24611530-24611549 | None:intergenic | 45.0% | |
| GCAAAAGCTCTGTTTCGCAA+AGG | - | chr8.3:24610469-24610488 | MS.gene87325:intron | 45.0% | |
| GCCAATCACGTGTGCAATTT+GGG | + | chr8.3:24610015-24610034 | None:intergenic | 45.0% | |
| GCGCTATTTGGACATGTGTT+GGG | - | chr8.3:24609465-24609484 | MS.gene87325:intron | 45.0% | |
| GGGAAAGTTGTGAAAGGGAT+TGG | - | chr8.3:24608816-24608835 | MS.gene87325:intron | 45.0% | |
| GGGGGTTCTGTAAGAAAAAG+GGG | + | chr8.3:24612638-24612657 | None:intergenic | 45.0% | |
| GGGTAAAACCCTATCCATCT+TGG | - | chr8.3:24612379-24612398 | MS.gene87325:intron | 45.0% | |
| GTCAAAGGCTTCATGATCCA+AGG | - | chr8.3:24608597-24608616 | MS.gene87325:intron | 45.0% | |
| GTTATCAATTCCCTGGTCTG+GGG | + | chr8.3:24612657-24612676 | None:intergenic | 45.0% | |
| GTTGTTAGGTCTGTTGAGCT+TGG | - | chr8.3:24608840-24608859 | MS.gene87325:intron | 45.0% | |
| TAGGGCCAAACTAACAAGGT+TGG | - | chr8.3:24610165-24610184 | MS.gene87325:intron | 45.0% | |
| TCATGAAGCCTTTGACGACA+CGG | + | chr8.3:24608593-24608612 | None:intergenic | 45.0% | |
| TCGAAGTACACTCTTGGGTT+CGG | + | chr8.3:24608411-24608430 | None:intergenic | 45.0% | |
| TCTCTTGAAGCTATCCAGAG+CGG | + | chr8.3:24612816-24612835 | None:intergenic | 45.0% | |
| TGAATAGACTCCTTCAACCC+TGG | + | chr8.3:24613073-24613092 | None:intergenic | 45.0% | |
| TGCAACACACCAGTTATCAG+CGG | - | chr8.3:24611833-24611852 | MS.gene87325:intron | 45.0% | |
| TGCGCTATTTGGACATGTGT+TGG | - | chr8.3:24609464-24609483 | MS.gene87325:intron | 45.0% | |
| TTATAACACTGGGGTCCTGA+GGG | - | chr8.3:24612959-24612978 | MS.gene87325:intron | 45.0% | |
| TTATCAATTCCCTGGTCTGG+GGG | + | chr8.3:24612656-24612675 | None:intergenic | 45.0% | |
| TTTGGACATGTGTTGGGAGA+AGG | - | chr8.3:24609471-24609490 | MS.gene87325:intron | 45.0% | |
| ! | AACAGCCAGGATTTTCCCAA+TGG | - | chr8.3:24611606-24611625 | MS.gene87325:CDS | 45.0% |
| ! | AACTGACTCCCATTGGTGTT+TGG | + | chr8.3:24608744-24608763 | None:intergenic | 45.0% |
| ! | ACATTTGGATGGGAAGCATG+TGG | - | chr8.3:24608788-24608807 | MS.gene87325:intron | 45.0% |
| ! | ATGGGAAGCATGTGGTGTTT+GGG | - | chr8.3:24608796-24608815 | MS.gene87325:intron | 45.0% |
| ! | CGGAAATTTTCGGCGGTTTT+GGG | + | chr8.3:24608495-24608514 | None:intergenic | 45.0% |
| ! | GAGAGATCGGAAATTTTCGG+CGG | + | chr8.3:24608502-24608521 | None:intergenic | 45.0% |
| ! | GAGGATTTGTTTACCCGAAC+AGG | + | chr8.3:24613208-24613227 | None:intergenic | 45.0% |
| ! | GCCAAACTAACAAGGTTGGT+GGG | - | chr8.3:24610169-24610188 | MS.gene87325:intron | 45.0% |
| ! | GGCTTGGTATCAAGATCAAC+AGG | + | chr8.3:24608990-24609009 | None:intergenic | 45.0% |
| ! | GTGGAAATGATGTGACTTGG+AGG | + | chr8.3:24613227-24613246 | None:intergenic | 45.0% |
| ! | TCCCTTTCCGTTCGTGTTTT+AGG | + | chr8.3:24608698-24608717 | None:intergenic | 45.0% |
| ! | TCGGAAATTTTCGGCGGTTT+TGG | + | chr8.3:24608496-24608515 | None:intergenic | 45.0% |
| ! | TGCCATAGCTTGTGTACCAT+TGG | - | chr8.3:24611511-24611530 | MS.gene87325:intron | 45.0% |
| !! | CAAACTAACAAGGTTGGTGG+GGG | - | chr8.3:24610171-24610190 | MS.gene87325:intron | 45.0% |
| !! | CAGAGAAGAGCACTGCTTTA+AGG | - | chr8.3:24609628-24609647 | MS.gene87325:intron | 45.0% |
| !! | CCAAACTAACAAGGTTGGTG+GGG | - | chr8.3:24610170-24610189 | MS.gene87325:intron | 45.0% |
| !! | TACTTCGACATAAGCATCGG+CGG | - | chr8.3:24608423-24608442 | MS.gene87325:CDS | 45.0% |
| !!! | TCTGTTTTTGGTTGTTGCCG+TGG | - | chr8.3:24609548-24609567 | MS.gene87325:intron | 45.0% |
| !! | ATAATAAAATAAAGAATATA+TGG | - | chr8.3:24611977-24611996 | MS.gene87325:intron | 5.0% |
| !! | ATTATCATAAATATAATAAA+AGG | - | chr8.3:24610782-24610801 | MS.gene87325:intron | 5.0% |
| !!! | ATAATTTATAAATTTTCATT+TGG | + | chr8.3:24610857-24610876 | None:intergenic | 5.0% |
| !!! | CTTTATTTTATTATTATTTT+TGG | + | chr8.3:24611971-24611990 | None:intergenic | 5.0% |
| AACACACCAGTTATCAGCGG+CGG | - | chr8.3:24611836-24611855 | MS.gene87325:intron | 50.0% | |
| AACTGGTGTGTTGCACTTGC+AGG | + | chr8.3:24611828-24611847 | None:intergenic | 50.0% | |
| ACCTTGCTCTGTTCTTCAGG+AGG | - | chr8.3:24613462-24613481 | MS.gene87325:CDS | 50.0% | |
| ATCCACACACATCAACAGCC+AGG | - | chr8.3:24611593-24611612 | MS.gene87325:CDS | 50.0% | |
| ATCCACCATTCAAGCTCCTC+CGG | + | chr8.3:24609011-24609030 | None:intergenic | 50.0% | |
| ATCCTGGCTGTTGATGTGTG+TGG | + | chr8.3:24611598-24611617 | None:intergenic | 50.0% | |
| ATCTTCCACCGTGTCGTCAA+AGG | - | chr8.3:24608582-24608601 | MS.gene87325:intron | 50.0% | |
| ATGGCACACAAGCTATGGCA+TGG | - | chr8.3:24611625-24611644 | MS.gene87325:CDS | 50.0% | |
| ATTGCTGAAGGGGAGGATGA+AGG | - | chr8.3:24608921-24608940 | MS.gene87325:intron | 50.0% | |
| CACAAGCTATGGCACCAAAG+TGG | + | chr8.3:24611505-24611524 | None:intergenic | 50.0% | |
| CCCCACCAACCTTGTTAGTT+TGG | + | chr8.3:24610173-24610192 | None:intergenic | 50.0% | |
| CCGGAATCGAAAGTTGCACA+AGG | - | chr8.3:24612006-24612025 | MS.gene87325:intron | 50.0% | |
| CCTTGCTCTGTTCTTCAGGA+GGG | - | chr8.3:24613463-24613482 | MS.gene87325:CDS | 50.0% | |
| CGGGCATATATCCAGGGATT+TGG | - | chr8.3:24611083-24611102 | MS.gene87325:intron | 50.0% | |
| CTCGTTCGGGCATATATCCA+GGG | - | chr8.3:24611077-24611096 | MS.gene87325:intron | 50.0% | |
| CTTATAACACTGGGGTCCTG+AGG | - | chr8.3:24612958-24612977 | MS.gene87325:intron | 50.0% | |
| CTTGAAATGGAGAGGGACGT+TGG | + | chr8.3:24608556-24608575 | None:intergenic | 50.0% | |
| GACATGTGTTGGGAGAAGGA+TGG | - | chr8.3:24609475-24609494 | MS.gene87325:intron | 50.0% | |
| GATGTGTGTGGATGTGTGTG+AGG | + | chr8.3:24611586-24611605 | None:intergenic | 50.0% | |
| GATTGTGGGGAGATTGCTGA+AGG | - | chr8.3:24608909-24608928 | MS.gene87325:intron | 50.0% | |
| GCAATCACAACATCCTGCTC+CGG | + | chr8.3:24608888-24608907 | None:intergenic | 50.0% | |
| GGCCAAACTAACAAGGTTGG+TGG | - | chr8.3:24610168-24610187 | MS.gene87325:intron | 50.0% | |
| GTACGCAATTGCCAGGAAGA+AGG | - | chr8.3:24613497-24613516 | MS.gene87325:CDS | 50.0% | |
| GTGTGTGATGTGTGTGTGTG+TGG | + | chr8.3:24611557-24611576 | None:intergenic | 50.0% | |
| TAGGTCTGTTGAGCTTGGTC+CGG | - | chr8.3:24608845-24608864 | MS.gene87325:intron | 50.0% | |
| TCCCAATGGCACACAAGCTA+TGG | - | chr8.3:24611620-24611639 | MS.gene87325:CDS | 50.0% | |
| TCGCAAGGCTTTGCGCTATT+TGG | - | chr8.3:24609453-24609472 | MS.gene87325:intron | 50.0% | |
| TCGGACTTTGCAATGCACGA+TGG | - | chr8.3:24610439-24610458 | MS.gene87325:intron | 50.0% | |
| TCTCGTTCGGGCATATATCC+AGG | - | chr8.3:24611076-24611095 | MS.gene87325:intron | 50.0% | |
| TGATCTTGATACCAAGCCGG+AGG | - | chr8.3:24608992-24609011 | MS.gene87325:intron | 50.0% | |
| TGTGATGTGTGTGTGTGTGG+TGG | + | chr8.3:24611554-24611573 | None:intergenic | 50.0% | |
| TTGCTGAAGGGGAGGATGAA+GGG | - | chr8.3:24608922-24608941 | MS.gene87325:intron | 50.0% | |
| TTGTGGGGAGATTGCTGAAG+GGG | - | chr8.3:24608911-24608930 | MS.gene87325:intron | 50.0% | |
| TTTGACGACACGGTGGAAGA+TGG | + | chr8.3:24608583-24608602 | None:intergenic | 50.0% | |
| ! | ACTCCCATTGGTGTTTGGAC+CGG | + | chr8.3:24608739-24608758 | None:intergenic | 50.0% |
| ! | CTCACTGCCCTTTTCTGAGT+AGG | - | chr8.3:24610230-24610249 | MS.gene87325:intron | 50.0% |
| ! | CTTTGGCTTACCAGGGTTGA+AGG | - | chr8.3:24613060-24613079 | MS.gene87325:CDS | 50.0% |
| ! | GATGGGAAGCATGTGGTGTT+TGG | - | chr8.3:24608795-24608814 | MS.gene87325:intron | 50.0% |
| ! | GCCATAGCTTGTGTGCCATT+GGG | + | chr8.3:24611624-24611643 | None:intergenic | 50.0% |
| ! | GTGTGCCATTGGGAAAATCC+TGG | + | chr8.3:24611614-24611633 | None:intergenic | 50.0% |
| ! | TGCCATAGCTTGTGTGCCAT+TGG | + | chr8.3:24611625-24611644 | None:intergenic | 50.0% |
| ! | TGTCCTGTGCCTGTTTTCTC+CGG | - | chr8.3:24610072-24610091 | MS.gene87325:intron | 50.0% |
| !! | AGGATGGTGTTGACCAAGGT+CGG | - | chr8.3:24609491-24609510 | MS.gene87325:intron | 50.0% |
| !! | CTAGGGTTGTGCAGTTTTGG+TGG | - | chr8.3:24611905-24611924 | MS.gene87325:intron | 50.0% |
| !! | GAGAAGGATGGTGTTGACCA+AGG | - | chr8.3:24609487-24609506 | MS.gene87325:intron | 50.0% |
| ACGAGGACGCCACATTTGGA+TGG | - | chr8.3:24608777-24608796 | MS.gene87325:intron | 55.0% | |
| ACTCAACAACAGCCTCCCTC+AGG | + | chr8.3:24612977-24612996 | None:intergenic | 55.0% | |
| AGCTCTGTTTCGCAAAGGCC+AGG | - | chr8.3:24610474-24610493 | MS.gene87325:intron | 55.0% | |
| CCCTCCTGAAGAACAGAGCA+AGG | + | chr8.3:24613466-24613485 | None:intergenic | 55.0% | |
| CGAGGACGCCACATTTGGAT+GGG | - | chr8.3:24608778-24608797 | MS.gene87325:intron | 55.0% | |
| CTGTTGAGCTTGGTCCGGTT+GGG | - | chr8.3:24608850-24608869 | MS.gene87325:intron | 55.0% | |
| CTGTTTCGCAAAGGCCAGGT+TGG | - | chr8.3:24610478-24610497 | MS.gene87325:intron | 55.0% | |
| CTTACAGAACCCCCAGACCA+GGG | - | chr8.3:24612644-24612663 | MS.gene87325:intron | 55.0% | |
| GGTCGATCATTCTCCCCAAC+CGG | + | chr8.3:24608867-24608886 | None:intergenic | 55.0% | |
| GGTTGGGGAGAATGATCGAC+CGG | - | chr8.3:24608866-24608885 | MS.gene87325:intron | 55.0% | |
| GTTTGGACCGGTATTCGCCA+TGG | + | chr8.3:24608727-24608746 | None:intergenic | 55.0% | |
| TCTGTTGAGCTTGGTCCGGT+TGG | - | chr8.3:24608849-24608868 | MS.gene87325:intron | 55.0% | |
| TCTTACAGAACCCCCAGACC+AGG | - | chr8.3:24612643-24612662 | MS.gene87325:intron | 55.0% | |
| TGAAGCCTTTGACGACACGG+TGG | + | chr8.3:24608590-24608609 | None:intergenic | 55.0% | |
| TGCTGAAGGGGAGGATGAAG+GGG | - | chr8.3:24608923-24608942 | MS.gene87325:intron | 55.0% | |
| TGTTGAGCTTGGTCCGGTTG+GGG | - | chr8.3:24608851-24608870 | MS.gene87325:intron | 55.0% | |
| TTCACAAGGTGGTAGGCCAC+CGG | + | chr8.3:24610094-24610113 | None:intergenic | 55.0% | |
| TTTCGCCGGTGCAGAGAGAT+CGG | + | chr8.3:24608515-24608534 | None:intergenic | 55.0% | |
| ! | TCTCTCTGCACCGGCGAAAA+AGG | - | chr8.3:24608516-24608535 | MS.gene87325:intron | 55.0% |
| ! | TGCACCGGCGAAAAAGGCAT+CGG | - | chr8.3:24608522-24608541 | MS.gene87325:intron | 55.0% |
| ! | TGTCAGTCTGAGGGTGCGTT+TGG | - | chr8.3:24610586-24610605 | MS.gene87325:intron | 55.0% |
| !! | TGGACCGATGCCTTTTTCGC+CGG | + | chr8.3:24608529-24608548 | None:intergenic | 55.0% |
| !!! | GGCGGTTTTGGGAACGACAT+CGG | + | chr8.3:24608484-24608503 | None:intergenic | 55.0% |
| ACCGGCGGCGAGTCAATCTA+CGG | - | chr8.3:24608645-24608664 | MS.gene87325:intron | 60.0% | |
| AGCCGGAGGAGCTTGAATGG+TGG | - | chr8.3:24609006-24609025 | MS.gene87325:intron | 60.0% | |
| AGCTATCCAGAGCGGCATCC+AGG | + | chr8.3:24612808-24612827 | None:intergenic | 60.0% | |
| CAATGACCTGGATGCCGCTC+TGG | - | chr8.3:24612799-24612818 | MS.gene87325:intron | 60.0% | |
| CCAAGCCGGAGGAGCTTGAA+TGG | - | chr8.3:24609003-24609022 | MS.gene87325:intron | 60.0% | |
| CCACCGGAGAAAACAGGCAC+AGG | + | chr8.3:24610078-24610097 | None:intergenic | 60.0% | |
| CCATTCAAGCTCCTCCGGCT+TGG | + | chr8.3:24609006-24609025 | None:intergenic | 60.0% | |
| GACGACGAGGACGCCACATT+TGG | - | chr8.3:24608773-24608792 | MS.gene87325:intron | 60.0% | |
| GGAGAATGATCGACCGGAGC+AGG | - | chr8.3:24608872-24608891 | MS.gene87325:intron | 60.0% | |
| GGTAGGCCACCGGAGAAAAC+AGG | + | chr8.3:24610084-24610103 | None:intergenic | 60.0% | |
| TAACACTGGGGTCCTGAGGG+AGG | - | chr8.3:24612962-24612981 | MS.gene87325:intron | 60.0% | |
| TGGAGAGGGACGTTGGTGTG+TGG | + | chr8.3:24608549-24608568 | None:intergenic | 60.0% | |
| TGGGGAGATTGCTGAAGGGG+AGG | - | chr8.3:24608914-24608933 | MS.gene87325:intron | 60.0% | |
| ! | CCTGTGCCTGTTTTCTCCGG+TGG | - | chr8.3:24610075-24610094 | MS.gene87325:intron | 60.0% |
| !! | AAGCATCGGCGGTGAACTCG+AGG | - | chr8.3:24608434-24608453 | MS.gene87325:CDS | 60.0% |
| !! | ACCGTAGATTGACTCGCCGC+CGG | + | chr8.3:24608649-24608668 | None:intergenic | 60.0% |
| !! | AGCATCGGCGGTGAACTCGA+GGG | - | chr8.3:24608435-24608454 | MS.gene87325:CDS | 60.0% |
| AGGCGGAGATGTCACCGCCT+TGG | + | chr8.3:24608617-24608636 | None:intergenic | 65.0% | |
| ATCAGCGGCGGCAGCAGGAT+AGG | - | chr8.3:24611848-24611867 | MS.gene87325:intron | 65.0% | |
| ATCTCCGCCTCCGACGGAAC+CGG | - | chr8.3:24608627-24608646 | MS.gene87325:intron | 65.0% | |
| CAGTTATCAGCGGCGGCAGC+AGG | - | chr8.3:24611843-24611862 | MS.gene87325:intron | 65.0% | |
| CTGCTGCCGCCGCTGATAAC+TGG | + | chr8.3:24611845-24611864 | None:intergenic | 65.0% | |
| GGTGACATCTCCGCCTCCGA+CGG | - | chr8.3:24608621-24608640 | MS.gene87325:intron | 65.0% | |
| !! | TGACTCGCCGCCGGTTCCGT+CGG | + | chr8.3:24608640-24608659 | None:intergenic | 70.0% |
| TCCGCCTCCGACGGAACCGG+CGG | - | chr8.3:24608630-24608649 | MS.gene87325:intron | 75.0% | |
| !!! | CTCGCCGCCGGTTCCGTCGG+AGG | + | chr8.3:24608637-24608656 | None:intergenic | 80.0% |
| !!! | GCCGCCGGTTCCGTCGGAGG+CGG | + | chr8.3:24608634-24608653 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 24608405 | 24613668 | 24608405 | ID=MS.gene87325 |
| chr8.3 | mRNA | 24608405 | 24613668 | 24608405 | ID=MS.gene87325.t1;Parent=MS.gene87325 |
| chr8.3 | exon | 24612997 | 24613668 | 24612997 | ID=MS.gene87325.t1.exon1;Parent=MS.gene87325.t1 |
| chr8.3 | CDS | 24612997 | 24613668 | 24612997 | ID=cds.MS.gene87325.t1;Parent=MS.gene87325.t1 |
| chr8.3 | exon | 24612565 | 24612652 | 24612565 | ID=MS.gene87325.t1.exon2;Parent=MS.gene87325.t1 |
| chr8.3 | CDS | 24612565 | 24612652 | 24612565 | ID=cds.MS.gene87325.t1;Parent=MS.gene87325.t1 |
| chr8.3 | exon | 24612390 | 24612442 | 24612390 | ID=MS.gene87325.t1.exon3;Parent=MS.gene87325.t1 |
| chr8.3 | CDS | 24612390 | 24612442 | 24612390 | ID=cds.MS.gene87325.t1;Parent=MS.gene87325.t1 |
| chr8.3 | exon | 24611578 | 24611679 | 24611578 | ID=MS.gene87325.t1.exon4;Parent=MS.gene87325.t1 |
| chr8.3 | CDS | 24611578 | 24611679 | 24611578 | ID=cds.MS.gene87325.t1;Parent=MS.gene87325.t1 |
| chr8.3 | exon | 24609213 | 24609288 | 24609213 | ID=MS.gene87325.t1.exon5;Parent=MS.gene87325.t1 |
| chr8.3 | CDS | 24609213 | 24609288 | 24609213 | ID=cds.MS.gene87325.t1;Parent=MS.gene87325.t1 |
| chr8.3 | exon | 24608555 | 24608592 | 24608555 | ID=MS.gene87325.t1.exon6;Parent=MS.gene87325.t1 |
| chr8.3 | CDS | 24608555 | 24608592 | 24608555 | ID=cds.MS.gene87325.t1;Parent=MS.gene87325.t1 |
| chr8.3 | exon | 24608405 | 24608458 | 24608405 | ID=MS.gene87325.t1.exon7;Parent=MS.gene87325.t1 |
| chr8.3 | CDS | 24608405 | 24608458 | 24608405 | ID=cds.MS.gene87325.t1;Parent=MS.gene87325.t1 |
| Gene Sequence |
| Protein sequence |
