Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052664.t1 | XP_003630949.1 | 99.6 | 279 | 1 | 0 | 1 | 279 | 1 | 279 | 6.20E-129 | 470.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052664.t1 | Q9SCM3 | 92.3 | 221 | 17 | 0 | 45 | 265 | 41 | 261 | 1.3e-116 | 420.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052664.t1 | G7LAL7 | 99.6 | 279 | 1 | 0 | 1 | 279 | 1 | 279 | 4.4e-129 | 470.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049361 | MS.gene052664 | 0.818214 | 2.20E-52 | -1.69E-46 |
| MS.gene049387 | MS.gene052664 | 0.800986 | 1.11E-48 | -1.69E-46 |
| MS.gene050134 | MS.gene052664 | 0.902708 | 7.35E-79 | -1.69E-46 |
| MS.gene050791 | MS.gene052664 | 0.831015 | 2.12E-55 | -1.69E-46 |
| MS.gene051904 | MS.gene052664 | 0.824699 | 7.01E-54 | -1.69E-46 |
| MS.gene051984 | MS.gene052664 | 0.816894 | 4.37E-52 | -1.69E-46 |
| MS.gene052209 | MS.gene052664 | 0.806541 | 7.82E-50 | -1.69E-46 |
| MS.gene052664 | MS.gene052666 | 0.847044 | 1.48E-59 | -1.69E-46 |
| MS.gene052664 | MS.gene053224 | 0.904299 | 1.42E-79 | -1.69E-46 |
| MS.gene052664 | MS.gene057272 | 0.85281 | 3.62E-61 | -1.69E-46 |
| MS.gene052664 | MS.gene057641 | 0.867336 | 1.47E-65 | -1.69E-46 |
| MS.gene052664 | MS.gene057643 | 0.894964 | 1.50E-75 | -1.69E-46 |
| MS.gene052664 | MS.gene060432 | 0.841093 | 5.86E-58 | -1.69E-46 |
| MS.gene052664 | MS.gene060483 | 0.835847 | 1.32E-56 | -1.69E-46 |
| MS.gene052664 | MS.gene06169 | 0.847475 | 1.13E-59 | -1.69E-46 |
| MS.gene052664 | MS.gene065418 | 0.839422 | 1.60E-57 | -1.69E-46 |
| MS.gene052664 | MS.gene06583 | 0.840521 | 8.27E-58 | -1.69E-46 |
| MS.gene052664 | MS.gene06617 | 0.851465 | 8.72E-61 | -1.69E-46 |
| MS.gene052664 | MS.gene066811 | 0.878765 | 2.16E-69 | -1.69E-46 |
| MS.gene052664 | MS.gene067331 | 0.820718 | 5.92E-53 | -1.69E-46 |
| MS.gene052664 | MS.gene067809 | 0.823273 | 1.51E-53 | -1.69E-46 |
| MS.gene052664 | MS.gene06803 | 0.846631 | 1.92E-59 | -1.69E-46 |
| MS.gene052664 | MS.gene06833 | 0.852315 | 5.00E-61 | -1.69E-46 |
| MS.gene052664 | MS.gene069339 | 0.814986 | 1.17E-51 | -1.69E-46 |
| MS.gene052664 | MS.gene06999 | 0.819034 | 1.44E-52 | -1.69E-46 |
| MS.gene052664 | MS.gene07018 | 0.809636 | 1.72E-50 | -1.69E-46 |
| MS.gene052664 | MS.gene070946 | 0.825584 | 4.33E-54 | -1.69E-46 |
| MS.gene052664 | MS.gene072093 | 0.869773 | 2.41E-66 | -1.69E-46 |
| MS.gene052664 | MS.gene07244 | 0.846094 | 2.69E-59 | -1.69E-46 |
| MS.gene052664 | MS.gene072503 | 0.81968 | 1.02E-52 | -1.69E-46 |
| MS.gene052664 | MS.gene072589 | 0.827777 | 1.30E-54 | -1.69E-46 |
| MS.gene052664 | MS.gene072591 | 0.804814 | 1.80E-49 | -1.69E-46 |
| MS.gene052664 | MS.gene072977 | 0.808032 | 3.78E-50 | -1.69E-46 |
| MS.gene052664 | MS.gene073358 | 0.819739 | 9.92E-53 | -1.69E-46 |
| MS.gene052664 | MS.gene074400 | 0.863717 | 2.04E-64 | -1.69E-46 |
| MS.gene052664 | MS.gene08521 | 0.822807 | 1.94E-53 | -1.69E-46 |
| MS.gene052664 | MS.gene08869 | 0.846359 | 2.28E-59 | -1.69E-46 |
| MS.gene052664 | MS.gene08870 | 0.894518 | 2.29E-75 | -1.69E-46 |
| MS.gene052664 | MS.gene08871 | 0.90223 | 1.20E-78 | -1.69E-46 |
| MS.gene052664 | MS.gene09038 | 0.837352 | 5.47E-57 | -1.69E-46 |
| MS.gene052664 | MS.gene09204 | 0.840589 | 7.94E-58 | -1.69E-46 |
| MS.gene052664 | MS.gene09761 | 0.83189 | 1.29E-55 | -1.69E-46 |
| MS.gene052664 | MS.gene09762 | 0.806107 | 9.66E-50 | -1.69E-46 |
| MS.gene052664 | MS.gene09779 | 0.844217 | 8.67E-59 | -1.69E-46 |
| MS.gene052664 | MS.gene09780 | 0.834549 | 2.81E-56 | -1.69E-46 |
| MS.gene052664 | MS.gene20153 | 0.888262 | 6.90E-73 | -1.69E-46 |
| MS.gene052664 | MS.gene20766 | 0.860508 | 1.97E-63 | -1.69E-46 |
| MS.gene052664 | MS.gene21355 | 0.801467 | 8.88E-49 | -1.69E-46 |
| MS.gene052664 | MS.gene22507 | 0.803746 | 3.01E-49 | -1.69E-46 |
| MS.gene052664 | MS.gene22784 | 0.821051 | 4.96E-53 | -1.69E-46 |
| MS.gene052664 | MS.gene23031 | 0.876582 | 1.24E-68 | -1.69E-46 |
| MS.gene052664 | MS.gene23314 | 0.801216 | 1.00E-48 | -1.69E-46 |
| MS.gene052664 | MS.gene24232 | 0.88446 | 1.88E-71 | -1.69E-46 |
| MS.gene052664 | MS.gene24639 | 0.801841 | 7.44E-49 | -1.69E-46 |
| MS.gene052664 | MS.gene25236 | 0.840949 | 6.39E-58 | -1.69E-46 |
| MS.gene052664 | MS.gene25238 | 0.817492 | 3.21E-52 | -1.69E-46 |
| MS.gene052664 | MS.gene25639 | 0.840274 | 9.59E-58 | -1.69E-46 |
| MS.gene052664 | MS.gene25903 | 0.908187 | 2.25E-81 | -1.69E-46 |
| MS.gene052664 | MS.gene26707 | 0.830487 | 2.86E-55 | -1.69E-46 |
| MS.gene052664 | MS.gene27003 | 0.855695 | 5.31E-62 | -1.69E-46 |
| MS.gene052664 | MS.gene27265 | 0.885765 | 6.13E-72 | -1.69E-46 |
| MS.gene052664 | MS.gene28147 | 0.854879 | 9.17E-62 | -1.69E-46 |
| MS.gene052664 | MS.gene28568 | 0.815965 | 7.06E-52 | -1.69E-46 |
| MS.gene052664 | MS.gene31039 | 0.813683 | 2.26E-51 | -1.69E-46 |
| MS.gene052664 | MS.gene32591 | 0.828733 | 7.63E-55 | -1.69E-46 |
| MS.gene052664 | MS.gene34372 | 0.858331 | 8.86E-63 | -1.69E-46 |
| MS.gene052664 | MS.gene38035 | 0.858747 | 6.66E-63 | -1.69E-46 |
| MS.gene052664 | MS.gene38222 | 0.823269 | 1.52E-53 | -1.69E-46 |
| MS.gene052664 | MS.gene40285 | 0.807299 | 5.41E-50 | -1.69E-46 |
| MS.gene052664 | MS.gene41726 | 0.863857 | 1.84E-64 | -1.69E-46 |
| MS.gene052664 | MS.gene43070 | 0.801522 | 8.65E-49 | -1.69E-46 |
| MS.gene052664 | MS.gene43071 | 0.832616 | 8.54E-56 | -1.69E-46 |
| MS.gene052664 | MS.gene44930 | 0.811697 | 6.15E-51 | -1.69E-46 |
| MS.gene052664 | MS.gene46387 | 0.874874 | 4.80E-68 | -1.69E-46 |
| MS.gene052664 | MS.gene46901 | 0.818516 | 1.88E-52 | -1.69E-46 |
| MS.gene052664 | MS.gene46903 | 0.840682 | 7.50E-58 | -1.69E-46 |
| MS.gene052664 | MS.gene46907 | 0.859003 | 5.59E-63 | -1.69E-46 |
| MS.gene052664 | MS.gene50269 | 0.850979 | 1.20E-60 | -1.69E-46 |
| MS.gene052664 | MS.gene50640 | 0.842817 | 2.05E-58 | -1.69E-46 |
| MS.gene052664 | MS.gene50756 | 0.898867 | 3.48E-77 | -1.69E-46 |
| MS.gene052664 | MS.gene50758 | 0.86572 | 4.81E-65 | -1.69E-46 |
| MS.gene052664 | MS.gene51868 | 0.839017 | 2.04E-57 | -1.69E-46 |
| MS.gene052664 | MS.gene55619 | 0.866275 | 3.21E-65 | -1.69E-46 |
| MS.gene052664 | MS.gene55890 | 0.908998 | 9.25E-82 | -1.69E-46 |
| MS.gene052664 | MS.gene59228 | 0.864663 | 1.03E-64 | -1.69E-46 |
| MS.gene052664 | MS.gene59230 | 0.876716 | 1.12E-68 | -1.69E-46 |
| MS.gene052664 | MS.gene59609 | 0.846438 | 2.17E-59 | -1.69E-46 |
| MS.gene052664 | MS.gene60693 | 0.899658 | 1.59E-77 | -1.69E-46 |
| MS.gene052664 | MS.gene61251 | 0.81076 | 9.82E-51 | -1.69E-46 |
| MS.gene052664 | MS.gene62561 | 0.818051 | 2.40E-52 | -1.69E-46 |
| MS.gene052664 | MS.gene62620 | 0.817497 | 3.20E-52 | -1.69E-46 |
| MS.gene052664 | MS.gene62683 | 0.858806 | 6.40E-63 | -1.69E-46 |
| MS.gene052664 | MS.gene62695 | 0.839998 | 1.13E-57 | -1.69E-46 |
| MS.gene052664 | MS.gene62791 | 0.872629 | 2.75E-67 | -1.69E-46 |
| MS.gene052664 | MS.gene63973 | 0.809864 | 1.53E-50 | -1.69E-46 |
| MS.gene052664 | MS.gene70316 | 0.852008 | 6.12E-61 | -1.69E-46 |
| MS.gene052664 | MS.gene70579 | 0.906115 | 2.09E-80 | -1.69E-46 |
| MS.gene052664 | MS.gene72382 | 0.877262 | 7.23E-69 | -1.69E-46 |
| MS.gene052664 | MS.gene73000 | 0.868498 | 6.25E-66 | -1.69E-46 |
| MS.gene052664 | MS.gene73833 | 0.867249 | 1.57E-65 | -1.69E-46 |
| MS.gene052664 | MS.gene74837 | 0.842015 | 3.35E-58 | -1.69E-46 |
| MS.gene052664 | MS.gene76031 | 0.801918 | 7.18E-49 | -1.69E-46 |
| MS.gene052664 | MS.gene76493 | 0.800374 | 1.49E-48 | -1.69E-46 |
| MS.gene052664 | MS.gene79721 | 0.879013 | 1.76E-69 | -1.69E-46 |
| MS.gene052664 | MS.gene80994 | 0.843563 | 1.30E-58 | -1.69E-46 |
| MS.gene052664 | MS.gene82489 | 0.829918 | 3.93E-55 | -1.69E-46 |
| MS.gene052664 | MS.gene87325 | 0.801769 | 7.70E-49 | -1.69E-46 |
| MS.gene052664 | MS.gene88918 | 0.854288 | 1.36E-61 | -1.69E-46 |
| MS.gene052664 | MS.gene90754 | 0.800127 | 1.67E-48 | -1.69E-46 |
| MS.gene052664 | MS.gene90945 | 0.826322 | 2.89E-54 | -1.69E-46 |
| MS.gene052664 | MS.gene92142 | 0.81665 | 4.96E-52 | -1.69E-46 |
| MS.gene052664 | MS.gene95672 | 0.81723 | 3.67E-52 | -1.69E-46 |
| MS.gene052664 | MS.gene96194 | 0.824595 | 7.41E-54 | -1.69E-46 |
| MS.gene052664 | MS.gene96225 | 0.868202 | 7.78E-66 | -1.69E-46 |
| MS.gene052664 | MS.gene98171 | 0.881557 | 2.17E-70 | -1.69E-46 |
| MS.gene052664 | MS.gene98978 | 0.831551 | 1.57E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055644 | MS.gene052664 | PPI |
| MS.gene052664 | MS.gene93719 | PPI |
| MS.gene072925 | MS.gene052664 | PPI |
| MS.gene32605 | MS.gene052664 | PPI |
| MS.gene020525 | MS.gene052664 | PPI |
| MS.gene055646 | MS.gene052664 | PPI |
| MS.gene25178 | MS.gene052664 | PPI |
| MS.gene41083 | MS.gene052664 | PPI |
| MS.gene052664 | MS.gene014808 | PPI |
| MS.gene05124 | MS.gene052664 | PPI |
| MS.gene62683 | MS.gene052664 | PPI |
| MS.gene072924 | MS.gene052664 | PPI |
| MS.gene32604 | MS.gene052664 | PPI |
| MS.gene014809 | MS.gene052664 | PPI |
| MS.gene41081 | MS.gene052664 | PPI |
| MS.gene008435 | MS.gene052664 | PPI |
| MS.gene014807 | MS.gene052664 | PPI |
| MS.gene046231 | MS.gene052664 | PPI |
| MS.gene026524 | MS.gene052664 | PPI |
| MS.gene034801 | MS.gene052664 | PPI |
| MS.gene049596 | MS.gene052664 | PPI |
| MS.gene072926 | MS.gene052664 | PPI |
| MS.gene32606 | MS.gene052664 | PPI |
| MS.gene052664 | MS.gene83062 | PPI |
| MS.gene98978 | MS.gene052664 | PPI |
| MS.gene052664 | MS.gene020523 | PPI |
| MS.gene53887 | MS.gene052664 | PPI |
| MS.gene052664 | MS.gene039608 | PPI |
| MS.gene015652 | MS.gene052664 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052664.t1 | MTR_8g105340 | 99.642 | 279 | 1 | 0 | 1 | 279 | 1 | 279 | 0.0 | 559 |
| MS.gene052664.t1 | MTR_8g105340 | 96.416 | 279 | 1 | 1 | 1 | 279 | 1 | 270 | 0.0 | 535 |
| MS.gene052664.t1 | MTR_1g032450 | 94.662 | 281 | 9 | 3 | 1 | 279 | 1 | 277 | 0.0 | 524 |
| MS.gene052664.t1 | MTR_4g088615 | 32.727 | 165 | 94 | 4 | 91 | 246 | 147 | 303 | 3.92e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052664.t1 | AT3G57490 | 92.308 | 221 | 17 | 0 | 45 | 265 | 41 | 261 | 3.14e-152 | 426 |
| MS.gene052664.t1 | AT2G41840 | 90.308 | 227 | 19 | 1 | 44 | 270 | 49 | 272 | 5.33e-151 | 423 |
| MS.gene052664.t1 | AT1G58684 | 90.222 | 225 | 22 | 0 | 45 | 269 | 49 | 273 | 3.13e-150 | 421 |
| MS.gene052664.t1 | AT1G58983 | 90.222 | 225 | 22 | 0 | 45 | 269 | 49 | 273 | 3.13e-150 | 421 |
| MS.gene052664.t1 | AT1G59359 | 90.222 | 225 | 22 | 0 | 45 | 269 | 49 | 273 | 3.13e-150 | 421 |
| MS.gene052664.t1 | AT1G58380 | 89.823 | 226 | 23 | 0 | 44 | 269 | 48 | 273 | 4.80e-150 | 421 |
| MS.gene052664.t1 | AT2G33800 | 29.530 | 149 | 97 | 2 | 91 | 239 | 147 | 287 | 3.67e-14 | 71.6 |
Find 98 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTCTCCTTCCAGAATTC+AGG | 0.269661 | 4.1:+1606343 | None:intergenic |
| TCCAGTGAGGAGAGGTTATT+GGG | 0.276824 | 4.1:-1607376 | MS.gene052664:CDS |
| CCTCCGCCCTTTCTTCTTCA+AGG | 0.277743 | 4.1:+1606254 | None:intergenic |
| GACGAAATTTCCAAGGGTTT+TGG | 0.292589 | 4.1:+1607176 | None:intergenic |
| GCAAACTGCAAAACCTTCTT+AGG | 0.306095 | 4.1:+1607237 | None:intergenic |
| ACTGTTCCTTGTAAGGTTAC+TGG | 0.306147 | 4.1:-1607330 | MS.gene052664:CDS |
| GTTCCTGCTCCTCGGGGTTC+TGG | 0.312116 | 4.1:-1607279 | MS.gene052664:CDS |
| TTCCAGTGAGGAGAGGTTAT+TGG | 0.329562 | 4.1:-1607377 | MS.gene052664:CDS |
| GGTGGAGATCGTGGTGGTTT+TGG | 0.346359 | 4.1:-1607819 | MS.gene052664:CDS |
| ATACTCTTGGAATGGAGATT+TGG | 0.351395 | 4.1:+1606315 | None:intergenic |
| TCGTATGGTTCCTGCTCCTC+GGG | 0.371220 | 4.1:-1607286 | MS.gene052664:CDS |
| TTCTGGTATTGTTGCTGCTA+GGG | 0.377258 | 4.1:-1607262 | MS.gene052664:CDS |
| TTCGTATGGTTCCTGCTCCT+CGG | 0.380151 | 4.1:-1607287 | MS.gene052664:CDS |
| GCCCGGGTTTGTTTCTGAAC+CGG | 0.384932 | 4.1:+1607534 | None:intergenic |
| GCCACACACTGTTCCTTGTA+AGG | 0.396169 | 4.1:-1607337 | MS.gene052664:CDS |
| ATGATTTGATGCTCCTTGAT+TGG | 0.409887 | 4.1:+1607606 | None:intergenic |
| CCACAACAAAAGCCTTGAAC+CGG | 0.415813 | 4.1:+1607499 | None:intergenic |
| TGCTGCTAGGGTTCCTAAGA+AGG | 0.419749 | 4.1:-1607250 | MS.gene052664:CDS |
| GACGCGAAGAAGAAGAGAAA+TGG | 0.420048 | 4.1:-1607707 | MS.gene052664:CDS |
| GATAGATCTGTTCAAGGCTT+CGG | 0.428013 | 4.1:+1607640 | None:intergenic |
| CCAACAGATCAGTATACTCT+TGG | 0.439572 | 4.1:+1606302 | None:intergenic |
| TGATTTGATGCTCCTTGATT+GGG | 0.442318 | 4.1:+1607607 | None:intergenic |
| CTTTGATCCTTGAAGAAGAA+AGG | 0.447076 | 4.1:-1606261 | MS.gene052664:CDS |
| CACTTTCCAGTAACCTTACA+AGG | 0.448418 | 4.1:+1607324 | None:intergenic |
| CGTGGTGGTCGTCGTAGAGC+TGG | 0.451382 | 4.1:-1607735 | MS.gene052664:CDS |
| GTTCTGGTATTGTTGCTGCT+AGG | 0.452667 | 4.1:-1607263 | MS.gene052664:CDS |
| CCCGGGCTGGTCAGAGAACC+CGG | 0.453571 | 4.1:-1607518 | MS.gene052664:CDS |
| TGGTCAGAGAACCCGGTTCA+AGG | 0.464046 | 4.1:-1607511 | MS.gene052664:CDS |
| CCGGGTTCTCTGACCAGCCC+GGG | 0.469594 | 4.1:+1607518 | None:intergenic |
| ACCGGGTTCTCTGACCAGCC+CGG | 0.472370 | 4.1:+1607517 | None:intergenic |
| AATGAAGATAGATCTGTTCA+AGG | 0.480151 | 4.1:+1607634 | None:intergenic |
| ATACCAGAACCCCGAGGAGC+AGG | 0.487255 | 4.1:+1607276 | None:intergenic |
| CAAAGCCTTAGCAGTTGGCT+TGG | 0.489306 | 4.1:+1606279 | None:intergenic |
| AACAATGGTCACGTTGGTCT+TGG | 0.495777 | 4.1:-1607468 | MS.gene052664:CDS |
| CCCCAATAACCTCTCCTCAC+TGG | 0.498943 | 4.1:+1607375 | None:intergenic |
| ACGCGAAGAAGAAGAGAAAT+GGG | 0.506516 | 4.1:-1607706 | MS.gene052664:CDS |
| CGGGGATCCACCAAAACCCT+TGG | 0.507607 | 4.1:-1607186 | MS.gene052664:CDS |
| GAAGTAGCTACTGCGATTCG+TGG | 0.513941 | 4.1:-1607429 | MS.gene052664:CDS |
| TCTTCATTCTCTCCCAATCA+AGG | 0.515383 | 4.1:-1607619 | MS.gene052664:CDS |
| GACTGTTTGATGAAAACCTA+CGG | 0.523763 | 4.1:-1606376 | MS.gene052664:CDS |
| GATTCGTGGTGCTATTATCC+TGG | 0.526761 | 4.1:-1607415 | MS.gene052664:CDS |
| TGGGTTCCAGTGACCAAGCT+AGG | 0.527015 | 4.1:-1607687 | MS.gene052664:CDS |
| AGGATCAAAGCCTTAGCAGT+TGG | 0.528734 | 4.1:+1606274 | None:intergenic |
| TGGTTCTGTTACTGTTCGTA+TGG | 0.533362 | 4.1:-1607301 | MS.gene052664:CDS |
| AGAGGTGGTCGTGGTGGACG+TGG | 0.534621 | 4.1:-1607768 | MS.gene052664:CDS |
| GAATCACACTCAGCTTAGCC+AGG | 0.535828 | 4.1:+1607397 | None:intergenic |
| TTTCATCAAACAGTCAAAAG+TGG | 0.538001 | 4.1:+1606384 | None:intergenic |
| GGTGGTGACAGAGGTGGTCG+TGG | 0.538425 | 4.1:-1607777 | MS.gene052664:CDS |
| TTTGATCCTTGAAGAAGAAA+GGG | 0.538675 | 4.1:-1606260 | MS.gene052664:CDS |
| GGACGTGGTGACAGAGGTCG+TGG | 0.539300 | 4.1:-1607753 | MS.gene052664:CDS |
| CTTCACGAGACGACCTAGCT+TGG | 0.541068 | 4.1:+1607674 | None:intergenic |
| CCAAGAGTATACTGATCTGT+TGG | 0.544918 | 4.1:-1606302 | MS.gene052664:CDS |
| AGACGACCTAGCTTGGTCAC+TGG | 0.551274 | 4.1:+1607681 | None:intergenic |
| GTTCAGAAACAAACCCGGGC+TGG | 0.552874 | 4.1:-1607531 | MS.gene052664:CDS |
| AAACCTTGACGAAATTTCCA+AGG | 0.552890 | 4.1:+1607169 | None:intergenic |
| GTTGGCCAAGCCAACTGCTA+AGG | 0.561111 | 4.1:-1606284 | MS.gene052664:CDS |
| GGTTATTGGGGTAACAAGAT+CGG | 0.562624 | 4.1:-1607363 | MS.gene052664:CDS |
| CCTCGTGGGTCCCACTCTCA+AGG | 0.569047 | 4.1:-1607577 | MS.gene052664:CDS |
| AACCTTGACGAAATTTCCAA+GGG | 0.572511 | 4.1:+1607170 | None:intergenic |
| CACAACAAAAGCCTTGAACC+GGG | 0.573291 | 4.1:+1607500 | None:intergenic |
| GGGTCCCACTCTCAAGGATG+AGG | 0.575792 | 4.1:-1607571 | MS.gene052664:CDS |
| ATCACCTCATCCTTGAGAGT+GGG | 0.578711 | 4.1:+1607567 | None:intergenic |
| CATCACCTCATCCTTGAGAG+TGG | 0.579578 | 4.1:+1607566 | None:intergenic |
| TCTAACACCTGAATTCTGGA+AGG | 0.587404 | 4.1:-1606350 | MS.gene052664:CDS |
| CTGAATTCTGGAAGGAGACA+AGG | 0.587850 | 4.1:-1606342 | MS.gene052664:CDS |
| TGTAAGGTTACTGGAAAGTG+TGG | 0.590089 | 4.1:-1607321 | MS.gene052664:CDS |
| AGATCAGTATACTCTTGGAA+TGG | 0.591366 | 4.1:+1606307 | None:intergenic |
| CTAGGTCGTCTCGTGAAGGA+AGG | 0.594091 | 4.1:-1607669 | MS.gene052664:CDS |
| TTCAGGTGTTAGAAAACCGT+AGG | 0.600291 | 4.1:+1606360 | None:intergenic |
| AACCCTTGGAAATTTCGTCA+AGG | 0.601072 | 4.1:-1607172 | MS.gene052664:intron |
| TGCCGGTTCAGAAACAAACC+CGG | 0.601185 | 4.1:-1607536 | MS.gene052664:CDS |
| GGTGGTCGTCGTAGAGCTGG+AGG | 0.613793 | 4.1:-1607732 | MS.gene052664:CDS |
| GGAGGTCGTGGTGGTGACAG+AGG | 0.615640 | 4.1:-1607786 | MS.gene052664:CDS |
| GCCGGTTCAGAAACAAACCC+GGG | 0.617531 | 4.1:-1607535 | MS.gene052664:CDS |
| GGTCGTGGTGGTGACAGAGG+TGG | 0.620463 | 4.1:-1607783 | MS.gene052664:CDS |
| CAAGCTAGGTCGTCTCGTGA+AGG | 0.627163 | 4.1:-1607673 | MS.gene052664:CDS |
| ACCTTACAAGGAACAGTGTG+TGG | 0.631342 | 4.1:+1607336 | None:intergenic |
| CGTATGGTTCCTGCTCCTCG+GGG | 0.632180 | 4.1:-1607285 | MS.gene052664:CDS |
| GGTGACAGAGGTGGTCGTGG+TGG | 0.633373 | 4.1:-1607774 | MS.gene052664:CDS |
| CCTTGAAGAAGAAAGGGCGG+AGG | 0.634716 | 4.1:-1606254 | MS.gene052664:CDS |
| TCAAATCATCGATACCCTCG+TGG | 0.638508 | 4.1:-1607592 | MS.gene052664:CDS |
| ATCAACAACATGGCTGAACG+TGG | 0.644114 | 4.1:-1607840 | None:intergenic |
| GCTGAACGTGGTGGAGATCG+TGG | 0.646255 | 4.1:-1607828 | MS.gene052664:CDS |
| TGAGGTGATGAAGATCATGC+CGG | 0.655740 | 4.1:-1607553 | MS.gene052664:CDS |
| CGTGGTGGACGTGGTGACAG+AGG | 0.656657 | 4.1:-1607759 | MS.gene052664:CDS |
| CTTGAGAGTGGGACCCACGA+GGG | 0.663874 | 4.1:+1607578 | None:intergenic |
| AGTGTGATTCCAGTGAGGAG+AGG | 0.664309 | 4.1:-1607384 | MS.gene052664:CDS |
| AACAACATGGCTGAACGTGG+TGG | 0.670923 | 4.1:-1607837 | None:intergenic |
| GATCCTTGAAGAAGAAAGGG+CGG | 0.672666 | 4.1:-1606257 | MS.gene052664:CDS |
| CCTTGAGAGTGGGACCCACG+AGG | 0.674713 | 4.1:+1607577 | None:intergenic |
| CAAATCATCGATACCCTCGT+GGG | 0.682658 | 4.1:-1607591 | MS.gene052664:CDS |
| GTTGTGGTTGGTGATAACAA+TGG | 0.690378 | 4.1:-1607483 | MS.gene052664:CDS |
| GGTGATAACAATGGTCACGT+TGG | 0.691414 | 4.1:-1607474 | MS.gene052664:CDS |
| CGTGGTGACAGAGGTCGTGG+TGG | 0.723864 | 4.1:-1607750 | MS.gene052664:CDS |
| AGCTGAGTGTGATTCCAGTG+AGG | 0.730503 | 4.1:-1607389 | MS.gene052664:CDS |
| CCAGTGAGGAGAGGTTATTG+GGG | 0.734558 | 4.1:-1607375 | MS.gene052664:CDS |
| GAACGTGGTGGAGATCGTGG+TGG | 0.744959 | 4.1:-1607825 | MS.gene052664:CDS |
| GCAACAATACCAGAACCCCG+AGG | 0.764619 | 4.1:+1607270 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGATATTAAAATGAGAAAA+TGG | + | chr4.1:1607311-1607330 | None:intergenic | 15.0% |
| !! | TGTTTATTCAAAATAACAAT+AGG | + | chr4.1:1607359-1607378 | None:intergenic | 15.0% |
| !!! | TAGTTGTTTGAATTTTAATT+TGG | - | chr4.1:1606965-1606984 | MS.gene052664:intron | 15.0% |
| !! | GATAAATCATAAATTAGAGA+AGG | + | chr4.1:1607650-1607669 | None:intergenic | 20.0% |
| !!! | ATGTGAATTGATTTTAAAGA+AGG | - | chr4.1:1607438-1607457 | MS.gene052664:CDS | 20.0% |
| !!! | TGAATTTTTGTGTATTGTTA+TGG | - | chr4.1:1607026-1607045 | MS.gene052664:intron | 20.0% |
| ! | AAAATGCACATACATAAGTT+TGG | + | chr4.1:1607465-1607484 | None:intergenic | 25.0% |
| ! | ACTTTCAGTTGAACATAAAT+TGG | + | chr4.1:1607147-1607166 | None:intergenic | 25.0% |
| ! | GTTAAACTGTACTATTTATC+TGG | - | chr4.1:1607216-1607235 | MS.gene052664:CDS | 25.0% |
| ! | TATGAATCAAAATGCAAGTT+TGG | + | chr4.1:1607397-1607416 | None:intergenic | 25.0% |
| ! | TGTTAGAAGTTTATTGTTGT+TGG | - | chr4.1:1607093-1607112 | MS.gene052664:intron | 25.0% |
| ! | TTCATAACAGACAAATTCTT+AGG | + | chr4.1:1607552-1607571 | None:intergenic | 25.0% |
| !! | TTATGTATGTGCATTTTGTA+TGG | - | chr4.1:1607468-1607487 | MS.gene052664:CDS | 25.0% |
| !!! | CATGGTTTCTTTATTTTAGA+CGG | - | chr4.1:1607062-1607081 | MS.gene052664:intron | 25.0% |
| AATGAAGATAGATCTGTTCA+AGG | + | chr4.1:1606449-1606468 | None:intergenic | 30.0% | |
| TATGGCAATACTATGATACA+TGG | - | chr4.1:1607044-1607063 | MS.gene052664:intron | 30.0% | |
| TTGATTCATATTATCCCTGT+TGG | - | chr4.1:1607407-1607426 | MS.gene052664:CDS | 30.0% | |
| TTTCATCAAACAGTCAAAAG+TGG | + | chr4.1:1607699-1607718 | None:intergenic | 30.0% | |
| TTTGATCCTTGAAGAAGAAA+GGG | - | chr4.1:1607820-1607839 | MS.gene052664:CDS | 30.0% | |
| ! | TTAGTTGGCAACATTTTACT+GGG | - | chr4.1:1607584-1607603 | MS.gene052664:CDS | 30.0% |
| ! | TTGTTTGCTAAATTGACAGA+AGG | - | chr4.1:1607001-1607020 | MS.gene052664:intron | 30.0% |
| ! | TTTAGTTGGCAACATTTTAC+TGG | - | chr4.1:1607583-1607602 | MS.gene052664:CDS | 30.0% |
| !!! | GAATTGCAGCTTTTTTTAGT+TGG | - | chr4.1:1607569-1607588 | MS.gene052664:CDS | 30.0% |
| AAACCTTGACGAAATTTCCA+AGG | + | chr4.1:1606914-1606933 | None:intergenic | 35.0% | |
| AACCTTGACGAAATTTCCAA+GGG | + | chr4.1:1606913-1606932 | None:intergenic | 35.0% | |
| AGATCAGTATACTCTTGGAA+TGG | + | chr4.1:1607776-1607795 | None:intergenic | 35.0% | |
| ATACTCTTGGAATGGAGATT+TGG | + | chr4.1:1607768-1607787 | None:intergenic | 35.0% | |
| ATGATTTGATGCTCCTTGAT+TGG | + | chr4.1:1606477-1606496 | None:intergenic | 35.0% | |
| CAAAGAATATGTCCATTGCA+TGG | + | chr4.1:1607526-1607545 | None:intergenic | 35.0% | |
| CTTTGATCCTTGAAGAAGAA+AGG | - | chr4.1:1607819-1607838 | MS.gene052664:CDS | 35.0% | |
| GACTGTTTGATGAAAACCTA+CGG | - | chr4.1:1607704-1607723 | MS.gene052664:CDS | 35.0% | |
| TCACATTCACAATACCAACA+GGG | + | chr4.1:1607424-1607443 | None:intergenic | 35.0% | |
| TGATTTGATGCTCCTTGATT+GGG | + | chr4.1:1606476-1606495 | None:intergenic | 35.0% | |
| TTCACATTCACAATACCAAC+AGG | + | chr4.1:1607425-1607444 | None:intergenic | 35.0% | |
| ! | GCTGTGACATTTCATTTTAC+AGG | - | chr4.1:1607673-1607692 | MS.gene052664:CDS | 35.0% |
| ! | GTTTTCTAACACCTGAATTC+TGG | - | chr4.1:1607726-1607745 | MS.gene052664:CDS | 35.0% |
| ! | TTTTGTGTAGAACCATGCAA+TGG | - | chr4.1:1607511-1607530 | MS.gene052664:CDS | 35.0% |
| !! | TGTCTTGTTGTTTCATAGTG+CGG | - | chr4.1:1607330-1607349 | MS.gene052664:CDS | 35.0% |
| AACCCTTGGAAATTTCGTCA+AGG | - | chr4.1:1606908-1606927 | MS.gene052664:intron | 40.0% | |
| ACGCGAAGAAGAAGAGAAAT+GGG | - | chr4.1:1606374-1606393 | MS.gene052664:CDS | 40.0% | |
| ACTGTTCCTTGTAAGGTTAC+TGG | - | chr4.1:1606750-1606769 | MS.gene052664:intron | 40.0% | |
| CACTTTCCAGTAACCTTACA+AGG | + | chr4.1:1606759-1606778 | None:intergenic | 40.0% | |
| CCAACAGATCAGTATACTCT+TGG | + | chr4.1:1607781-1607800 | None:intergenic | 40.0% | |
| CTGGTTGAACAATAATTCCG+TGG | - | chr4.1:1607235-1607254 | MS.gene052664:CDS | 40.0% | |
| GATAGATCTGTTCAAGGCTT+CGG | + | chr4.1:1606443-1606462 | None:intergenic | 40.0% | |
| GCAAACTGCAAAACCTTCTT+AGG | + | chr4.1:1606846-1606865 | None:intergenic | 40.0% | |
| GGTTATTGGGGTAACAAGAT+CGG | - | chr4.1:1606717-1606736 | MS.gene052664:intron | 40.0% | |
| TCTAACACCTGAATTCTGGA+AGG | - | chr4.1:1607730-1607749 | MS.gene052664:CDS | 40.0% | |
| TCTTCATTCTCTCCCAATCA+AGG | - | chr4.1:1606461-1606480 | MS.gene052664:intron | 40.0% | |
| TGTAAGGTTACTGGAAAGTG+TGG | - | chr4.1:1606759-1606778 | MS.gene052664:intron | 40.0% | |
| TGTCGATGATTCATAGACCA+CGG | + | chr4.1:1607255-1607274 | None:intergenic | 40.0% | |
| TTCAGGTGTTAGAAAACCGT+AGG | + | chr4.1:1607723-1607742 | None:intergenic | 40.0% | |
| TTCTGGTATTGTTGCTGCTA+GGG | - | chr4.1:1606818-1606837 | MS.gene052664:intron | 40.0% | |
| ! | AAGAAGGTTTTGCAGTTTGC+TGG | - | chr4.1:1606846-1606865 | MS.gene052664:intron | 40.0% |
| ! | ATGATGTTTTCACTTCCTCC+CGG | - | chr4.1:1606874-1606893 | MS.gene052664:intron | 40.0% |
| ! | CCAAGAGTATACTGATCTGT+TGG | - | chr4.1:1607778-1607797 | MS.gene052664:CDS | 40.0% |
| ! | GACGAAATTTCCAAGGGTTT+TGG | + | chr4.1:1606907-1606926 | None:intergenic | 40.0% |
| ! | TGGTTCTGTTACTGTTCGTA+TGG | - | chr4.1:1606779-1606798 | MS.gene052664:intron | 40.0% |
| !! | GAAATTTCCAAGGGTTTTGG+TGG | + | chr4.1:1606904-1606923 | None:intergenic | 40.0% |
| !! | GTTGTGGTTGGTGATAACAA+TGG | - | chr4.1:1606597-1606616 | MS.gene052664:intron | 40.0% |
| !! | TTCAAGGCTTTTGTTGTGGT+TGG | - | chr4.1:1606585-1606604 | MS.gene052664:intron | 40.0% |
| ACCTTACAAGGAACAGTGTG+TGG | + | chr4.1:1606747-1606766 | None:intergenic | 45.0% | |
| AGGATCAAAGCCTTAGCAGT+TGG | + | chr4.1:1607809-1607828 | None:intergenic | 45.0% | |
| ATCACCTCATCCTTGAGAGT+GGG | + | chr4.1:1606516-1606535 | None:intergenic | 45.0% | |
| CAAATCATCGATACCCTCGT+GGG | - | chr4.1:1606489-1606508 | MS.gene052664:intron | 45.0% | |
| CACAACAAAAGCCTTGAACC+GGG | + | chr4.1:1606583-1606602 | None:intergenic | 45.0% | |
| CCACAACAAAAGCCTTGAAC+CGG | + | chr4.1:1606584-1606603 | None:intergenic | 45.0% | |
| CTTGTCTCCTTCCAGAATTC+AGG | + | chr4.1:1607740-1607759 | None:intergenic | 45.0% | |
| GACGCGAAGAAGAAGAGAAA+TGG | - | chr4.1:1606373-1606392 | MS.gene052664:CDS | 45.0% | |
| GATCCTTGAAGAAGAAAGGG+CGG | - | chr4.1:1607823-1607842 | MS.gene052664:CDS | 45.0% | |
| GGTGATAACAATGGTCACGT+TGG | - | chr4.1:1606606-1606625 | MS.gene052664:intron | 45.0% | |
| GTTCTGGTATTGTTGCTGCT+AGG | - | chr4.1:1606817-1606836 | MS.gene052664:intron | 45.0% | |
| TCAAATCATCGATACCCTCG+TGG | - | chr4.1:1606488-1606507 | MS.gene052664:intron | 45.0% | |
| TCCAGTGAGGAGAGGTTATT+GGG | - | chr4.1:1606704-1606723 | MS.gene052664:intron | 45.0% | |
| TGAGGTGATGAAGATCATGC+CGG | - | chr4.1:1606527-1606546 | MS.gene052664:intron | 45.0% | |
| TTCCAGTGAGGAGAGGTTAT+TGG | - | chr4.1:1606703-1606722 | MS.gene052664:intron | 45.0% | |
| ! | AACAATGGTCACGTTGGTCT+TGG | - | chr4.1:1606612-1606631 | MS.gene052664:intron | 45.0% |
| ! | CTGAATTCTGGAAGGAGACA+AGG | - | chr4.1:1607738-1607757 | MS.gene052664:CDS | 45.0% |
| ! | TGATGTTTTCACTTCCTCCC+GGG | - | chr4.1:1606875-1606894 | MS.gene052664:intron | 45.0% |
| !! | CTTGTTGTTTCATAGTGCGG+TGG | - | chr4.1:1607333-1607352 | MS.gene052664:CDS | 45.0% |
| !! | GATTCGTGGTGCTATTATCC+TGG | - | chr4.1:1606665-1606684 | MS.gene052664:intron | 45.0% |
| AGCTGAGTGTGATTCCAGTG+AGG | - | chr4.1:1606691-1606710 | MS.gene052664:intron | 50.0% | |
| AGTGTGATTCCAGTGAGGAG+AGG | - | chr4.1:1606696-1606715 | MS.gene052664:intron | 50.0% | |
| CAAAGCCTTAGCAGTTGGCT+TGG | + | chr4.1:1607804-1607823 | None:intergenic | 50.0% | |
| CATCACCTCATCCTTGAGAG+TGG | + | chr4.1:1606517-1606536 | None:intergenic | 50.0% | |
| CCAGTGAGGAGAGGTTATTG+GGG | - | chr4.1:1606705-1606724 | MS.gene052664:intron | 50.0% | |
| GAAGTAGCTACTGCGATTCG+TGG | - | chr4.1:1606651-1606670 | MS.gene052664:intron | 50.0% | |
| GAATCACACTCAGCTTAGCC+AGG | + | chr4.1:1606686-1606705 | None:intergenic | 50.0% | |
| GCCACACACTGTTCCTTGTA+AGG | - | chr4.1:1606743-1606762 | MS.gene052664:intron | 50.0% | |
| TGCTGCTAGGGTTCCTAAGA+AGG | - | chr4.1:1606830-1606849 | MS.gene052664:intron | 50.0% | |
| TTCGTATGGTTCCTGCTCCT+CGG | - | chr4.1:1606793-1606812 | MS.gene052664:intron | 50.0% | |
| ! | CCGGTTCAAGGCTTTTGTTG+TGG | - | chr4.1:1606581-1606600 | MS.gene052664:intron | 50.0% |
| ! | GATGTTTTCACTTCCTCCCG+GGG | - | chr4.1:1606876-1606895 | MS.gene052664:intron | 50.0% |
| !! | TGCCGGTTCAGAAACAAACC+CGG | - | chr4.1:1606544-1606563 | MS.gene052664:intron | 50.0% |
| !!! | GGTGGTTTTGGCAGTGGTTT+TGG | - | chr4.1:1606273-1606292 | MS.gene052664:CDS | 50.0% |
| !!! | GGTTTTGGCAGTGGTTTTGG+AGG | - | chr4.1:1606276-1606295 | MS.gene052664:CDS | 50.0% |
| AGACGACCTAGCTTGGTCAC+TGG | + | chr4.1:1606402-1606421 | None:intergenic | 55.0% | |
| CAAGCTAGGTCGTCTCGTGA+AGG | - | chr4.1:1606407-1606426 | MS.gene052664:intron | 55.0% | |
| CCCCAATAACCTCTCCTCAC+TGG | + | chr4.1:1606708-1606727 | None:intergenic | 55.0% | |
| CCTCCGCCCTTTCTTCTTCA+AGG | + | chr4.1:1607829-1607848 | None:intergenic | 55.0% | |
| CCTTGAAGAAGAAAGGGCGG+AGG | - | chr4.1:1607826-1607845 | MS.gene052664:CDS | 55.0% | |
| CTAGGTCGTCTCGTGAAGGA+AGG | - | chr4.1:1606411-1606430 | MS.gene052664:intron | 55.0% | |
| CTTCACGAGACGACCTAGCT+TGG | + | chr4.1:1606409-1606428 | None:intergenic | 55.0% | |
| GCAACAATACCAGAACCCCG+AGG | + | chr4.1:1606813-1606832 | None:intergenic | 55.0% | |
| GTTCAGAAACAAACCCGGGC+TGG | - | chr4.1:1606549-1606568 | MS.gene052664:intron | 55.0% | |
| GTTGGCCAAGCCAACTGCTA+AGG | - | chr4.1:1607796-1607815 | MS.gene052664:CDS | 55.0% | |
| TCGTATGGTTCCTGCTCCTC+GGG | - | chr4.1:1606794-1606813 | MS.gene052664:intron | 55.0% | |
| TGGGTTCCAGTGACCAAGCT+AGG | - | chr4.1:1606393-1606412 | MS.gene052664:intron | 55.0% | |
| TGGTCAGAGAACCCGGTTCA+AGG | - | chr4.1:1606569-1606588 | MS.gene052664:intron | 55.0% | |
| ! | GCCGGTTCAGAAACAAACCC+GGG | - | chr4.1:1606545-1606564 | MS.gene052664:intron | 55.0% |
| ! | GGTGGAGATCGTGGTGGTTT+TGG | - | chr4.1:1606261-1606280 | MS.gene052664:CDS | 55.0% |
| !! | AAGGGTTTTGGTGGATCCCC+GGG | + | chr4.1:1606895-1606914 | None:intergenic | 55.0% |
| !! | CAAGGGTTTTGGTGGATCCC+CGG | + | chr4.1:1606896-1606915 | None:intergenic | 55.0% |
| !! | GCCCGGGTTTGTTTCTGAAC+CGG | + | chr4.1:1606549-1606568 | None:intergenic | 55.0% |
| !!! | AGTGGTTTTGGAGGTCGTGG+TGG | - | chr4.1:1606285-1606304 | MS.gene052664:CDS | 55.0% |
| !!! | GATCGTGGTGGTTTTGGCAG+TGG | - | chr4.1:1606267-1606286 | MS.gene052664:CDS | 55.0% |
| ATACCAGAACCCCGAGGAGC+AGG | + | chr4.1:1606807-1606826 | None:intergenic | 60.0% | |
| CGGGGATCCACCAAAACCCT+TGG | - | chr4.1:1606894-1606913 | MS.gene052664:intron | 60.0% | |
| CGTATGGTTCCTGCTCCTCG+GGG | - | chr4.1:1606795-1606814 | MS.gene052664:intron | 60.0% | |
| CTTGAGAGTGGGACCCACGA+GGG | + | chr4.1:1606505-1606524 | None:intergenic | 60.0% | |
| GGGTCCCACTCTCAAGGATG+AGG | - | chr4.1:1606509-1606528 | MS.gene052664:intron | 60.0% | |
| ! | GAACGTGGTGGAGATCGTGG+TGG | - | chr4.1:1606255-1606274 | MS.gene052664:CDS | 60.0% |
| ! | GCTGAACGTGGTGGAGATCG+TGG | - | chr4.1:1606252-1606271 | MS.gene052664:CDS | 60.0% |
| !!! | GGCAGTGGTTTTGGAGGTCG+TGG | - | chr4.1:1606282-1606301 | MS.gene052664:CDS | 60.0% |
| ACCGGGTTCTCTGACCAGCC+CGG | + | chr4.1:1606566-1606585 | None:intergenic | 65.0% | |
| CCTCGTGGGTCCCACTCTCA+AGG | - | chr4.1:1606503-1606522 | MS.gene052664:intron | 65.0% | |
| CCTTGAGAGTGGGACCCACG+AGG | + | chr4.1:1606506-1606525 | None:intergenic | 65.0% | |
| CGTGGTGACAGAGGTCGTGG+TGG | - | chr4.1:1606330-1606349 | MS.gene052664:CDS | 65.0% | |
| CGTGGTGGTCGTCGTAGAGC+TGG | - | chr4.1:1606345-1606364 | MS.gene052664:CDS | 65.0% | |
| GGACGTGGTGACAGAGGTCG+TGG | - | chr4.1:1606327-1606346 | MS.gene052664:CDS | 65.0% | |
| GGTGACAGAGGTGGTCGTGG+TGG | - | chr4.1:1606306-1606325 | MS.gene052664:CDS | 65.0% | |
| GGTGGTCGTCGTAGAGCTGG+AGG | - | chr4.1:1606348-1606367 | MS.gene052664:CDS | 65.0% | |
| GGTGGTGACAGAGGTGGTCG+TGG | - | chr4.1:1606303-1606322 | MS.gene052664:CDS | 65.0% | |
| GTTCCTGCTCCTCGGGGTTC+TGG | - | chr4.1:1606801-1606820 | MS.gene052664:intron | 65.0% | |
| ! | GGAGGTCGTGGTGGTGACAG+AGG | - | chr4.1:1606294-1606313 | MS.gene052664:CDS | 65.0% |
| ! | GGTCGTGGTGGTGACAGAGG+TGG | - | chr4.1:1606297-1606316 | MS.gene052664:CDS | 65.0% |
| !! | AGAGGTGGTCGTGGTGGACG+TGG | - | chr4.1:1606312-1606331 | MS.gene052664:CDS | 65.0% |
| !! | CGTGGTGGACGTGGTGACAG+AGG | - | chr4.1:1606321-1606340 | MS.gene052664:CDS | 65.0% |
| !! | GGTTTTGGTGGATCCCCGGG+AGG | + | chr4.1:1606892-1606911 | None:intergenic | 65.0% |
| CCGGGTTCTCTGACCAGCCC+GGG | + | chr4.1:1606565-1606584 | None:intergenic | 70.0% | |
| !! | CCCGGGCTGGTCAGAGAACC+CGG | - | chr4.1:1606562-1606581 | MS.gene052664:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 1606249 | 1607853 | 1606249 | ID=MS.gene052664 |
| chr4.1 | mRNA | 1606249 | 1607853 | 1606249 | ID=MS.gene052664.t1;Parent=MS.gene052664 |
| chr4.1 | exon | 1607173 | 1607853 | 1607173 | ID=MS.gene052664.t1.exon1;Parent=MS.gene052664.t1 |
| chr4.1 | CDS | 1607173 | 1607853 | 1607173 | ID=cds.MS.gene052664.t1;Parent=MS.gene052664.t1 |
| chr4.1 | exon | 1606249 | 1606407 | 1606249 | ID=MS.gene052664.t1.exon2;Parent=MS.gene052664.t1 |
| chr4.1 | CDS | 1606249 | 1606407 | 1606249 | ID=cds.MS.gene052664.t1;Parent=MS.gene052664.t1 |
| Gene Sequence |
| Protein sequence |
