AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057165


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057165.t1 MTR_4g103680 97.908 478 10 0 1 478 1 478 0.0 961
MS.gene057165.t1 MTR_5g042880 93.542 480 29 2 1 478 1 480 0.0 922
MS.gene057165.t1 MTR_3g088970 77.662 479 104 2 1 478 1 477 0.0 790
MS.gene057165.t1 MTR_3g088940 77.143 140 32 0 296 435 10 149 4.74e-75 233
MS.gene057165.t1 MTR_3g088950 81.159 69 12 1 227 295 512 579 9.33e-33 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057165.t1 AT4G24830 86.792 424 55 1 53 476 70 492 0.0 773
MS.gene057165.t1 AT4G24830 77.594 424 50 2 53 476 70 448 0.0 672

Find 145 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGATTTCTTGCAGATATT+TGG 0.139184 8.1:+20666162 MS.gene057165:intron
ACACCAACTCTGCATATTTA+AGG 0.172014 8.1:-20666441 None:intergenic
TCAAGTCCTTTACGACTAAT+TGG 0.184464 8.1:-20664127 None:intergenic
TCTTGCAGATATTTGGAAAT+TGG 0.199883 8.1:+20666169 MS.gene057165:intron
GTCACTAAAGGGTGATATTT+TGG 0.204335 8.1:+20665707 MS.gene057165:intron
ACGTAGCCCGCTACCCTTCT+TGG 0.260980 8.1:-20663329 None:intergenic
CAGAGAATATTCTGTTTAAT+CGG 0.269629 8.1:+20662575 MS.gene057165:intron
CGAAGTACCTTTGCAATTAC+AGG 0.273791 8.1:-20664242 None:intergenic
CATCATGTACATATCCTTCT+TGG 0.285689 8.1:-20665748 None:intergenic
ACTCCCGTGCTGCTTTAAAA+AGG 0.317154 8.1:-20666366 None:intergenic
TCTTGCCTATACAGGCTAAA+AGG 0.329004 8.1:-20666595 None:intergenic
CAAGTACTTCCTCTCATAAA+TGG 0.334381 8.1:-20664198 None:intergenic
CGTATAGGGTATAAAAGAAT+TGG 0.348572 8.1:+20664067 MS.gene057165:intron
AAAGCACAACGTTCCCGTTC+CGG 0.350464 8.1:+20664813 MS.gene057165:CDS
GACTAATTGGGAGGCTCCAC+TGG 0.351872 8.1:-20664114 None:intergenic
TTGGAAATTGGTATTGAGTC+TGG 0.354536 8.1:+20666181 MS.gene057165:CDS
TAACCCATGTTCATTCAAAA+AGG 0.356247 8.1:+20662609 MS.gene057165:CDS
CCCGCTACCCTTCTTGGCTT+CGG 0.371984 8.1:-20663323 None:intergenic
AGCATTGCCCGGACCTTCAT+TGG 0.372630 8.1:-20666691 None:intergenic
TCCTTCTTGGGTTCATTAGC+CGG 0.373034 8.1:-20665735 None:intergenic
TGGAGGGAGTGGGATATTAC+AGG 0.373658 8.1:+20664763 MS.gene057165:CDS
ATATTCTGTTTAATCGGGTT+TGG 0.378824 8.1:+20662581 MS.gene057165:CDS
TATAAAAGAATTGGACGGTT+TGG 0.385364 8.1:+20664076 MS.gene057165:CDS
GGTCCGGGCAATGCTTGAAC+AGG 0.385668 8.1:+20666699 MS.gene057165:CDS
TGGTGCTGCAGAGAGAATTA+TGG 0.387537 8.1:+20663847 MS.gene057165:intron
GCTACGTGGAAAATTGAATA+AGG 0.387753 8.1:+20663345 MS.gene057165:CDS
GGAGCCACAATGTTTAGCTT+GGG 0.388294 8.1:-20664739 None:intergenic
GTTCCTATCCCTGCTATAGA+TGG 0.391675 8.1:-20664848 None:intergenic
GCTTGATCTGGAGCATCCTC+CGG 0.393049 8.1:-20665780 None:intergenic
CGCAGTAATCTTCTGCATAA+AGG 0.397397 8.1:-20666506 None:intergenic
AAGATTACTGCGACCACAAC+AGG 0.398632 8.1:+20666517 MS.gene057165:CDS
CAAGTCCTTTACGACTAATT+GGG 0.405173 8.1:-20664126 None:intergenic
ATGAGATATCTTGCCTATAC+AGG 0.405421 8.1:-20666603 None:intergenic
GGACTTCCCGTTTCACTCAA+TGG 0.408949 8.1:+20666202 MS.gene057165:CDS
CACCAACTCTGCATATTTAA+GGG 0.411511 8.1:-20666440 None:intergenic
GTCGGTGCTGGTAGACTTCA+AGG 0.424838 8.1:+20662738 MS.gene057165:CDS
GAAGCTTACTCTGCTTGATC+TGG 0.429139 8.1:-20665792 None:intergenic
ATAGGTGGAAAGCACGGAAT+TGG 0.430346 8.1:+20666268 MS.gene057165:CDS
ACGGTCTTCCAATGAAGGTC+CGG 0.434028 8.1:+20666683 MS.gene057165:CDS
TTCCTTTCCCTGTACACCCA+TGG 0.439674 8.1:-20664579 None:intergenic
ACTCCTTCCCTTCATGCAAC+AGG 0.446702 8.1:+20662386 MS.gene057165:CDS
AGAGAATATTCTGTTTAATC+GGG 0.449216 8.1:+20662576 MS.gene057165:intron
GTATTTCCTTGCTTGCGTGC+TGG 0.449287 8.1:+20664173 MS.gene057165:CDS
AGTTGGTGTATGCTGGTAGA+TGG 0.450417 8.1:+20666455 MS.gene057165:CDS
AGCTCAGCGAGTAAAGTTGC+TGG 0.451716 8.1:-20666238 None:intergenic
TATGAGAGGAAGTACTTGCT+TGG 0.452415 8.1:+20664203 MS.gene057165:CDS
GCTGTCTCCCATGGGTGTAC+AGG 0.452794 8.1:+20664571 MS.gene057165:CDS
CTTGATCTGGAGCATCCTCC+GGG 0.455389 8.1:-20665779 None:intergenic
ATGAGAGGAAGTACTTGCTT+GGG 0.457223 8.1:+20664204 MS.gene057165:CDS
TGGAGCCACAATGTTTAGCT+TGG 0.467832 8.1:-20664740 None:intergenic
GGAGCTGATGCTGTCTCCCA+TGG 0.468989 8.1:+20664562 MS.gene057165:CDS
ATGGTTGAGAATAGGCTTGT+AGG 0.469420 8.1:+20666301 MS.gene057165:CDS
AAAGGTTCTGTTACTGTAGC+AGG 0.471477 8.1:+20666562 MS.gene057165:CDS
ATCATGTACATATCCTTCTT+GGG 0.473196 8.1:-20665747 None:intergenic
CTCGCTGAGCTCAATGAGAT+AGG 0.474365 8.1:+20666250 MS.gene057165:CDS
GTCTTGCCATTGAGTGAAAC+GGG 0.476700 8.1:-20666208 None:intergenic
CGTCTTGCCATTGAGTGAAA+CGG 0.482531 8.1:-20666209 None:intergenic
GCTTTACGGTCTTCCAATGA+AGG 0.484315 8.1:+20666678 MS.gene057165:CDS
GCAAGATATCTCATCATTTG+AGG 0.485368 8.1:+20666612 MS.gene057165:CDS
TTGTGGCTCCATGGAGGGAG+TGG 0.488472 8.1:+20664752 MS.gene057165:CDS
TACAGGGAAAGGAAATGATC+AGG 0.502638 8.1:+20664588 MS.gene057165:CDS
GTGTGCTTCACTGCTGATGT+TGG 0.505167 8.1:+20663880 MS.gene057165:CDS
CGGTCTTCCAATGAAGGTCC+GGG 0.505856 8.1:+20666684 MS.gene057165:CDS
TCCTTTCCCTGTACACCCAT+GGG 0.506646 8.1:-20664578 None:intergenic
GGCAGTATCACGCAGTCATA+CGG 0.506933 8.1:+20663288 MS.gene057165:CDS
CCTTCTTGGGTTCATTAGCC+GGG 0.507887 8.1:-20665734 None:intergenic
ATTAGTCGTAAAGGACTTGA+AGG 0.509453 8.1:+20664130 MS.gene057165:CDS
GTTGTACTTGCTTACAGTGG+TGG 0.512883 8.1:+20663367 MS.gene057165:CDS
TTCATGACATGCAGTTGTAA+AGG 0.514606 8.1:+20663267 MS.gene057165:intron
TACCTTTGCAATTACAGGAC+GGG 0.515868 8.1:-20664237 None:intergenic
TATTCTCAACCATGTCGATC+CGG 0.516319 8.1:-20666291 None:intergenic
AGCTAAACATTGTGGCTCCA+TGG 0.517704 8.1:+20664743 MS.gene057165:CDS
TCTGTTTAATCGGGTTTGGA+AGG 0.518126 8.1:+20662585 MS.gene057165:CDS
GGATCGACATGGTTGAGAAT+AGG 0.521327 8.1:+20666293 MS.gene057165:CDS
AATGCTTTCAACTGAGCCAT+TGG 0.522346 8.1:-20662338 None:intergenic
CAGTCATTGTCCCATGGTTG+AGG 0.522691 8.1:+20663401 MS.gene057165:CDS
GAGCTGATGCTGTCTCCCAT+GGG 0.524079 8.1:+20664563 MS.gene057165:CDS
CAAGATATCTCATCATTTGA+GGG 0.524808 8.1:+20666613 MS.gene057165:CDS
AGGAGAACCTGTTGCATGAA+GGG 0.528602 8.1:-20662393 None:intergenic
CCAAGAGCTAGTGTCGGTGC+TGG 0.529991 8.1:+20662726 MS.gene057165:CDS
GTAATATCCCACTCCCTCCA+TGG 0.530801 8.1:-20664760 None:intergenic
TGATCCACTTCGTGAGTCGA+TGG 0.531316 8.1:+20666480 MS.gene057165:CDS
CGCGGAGTTTATGAAACTCC+TGG 0.532888 8.1:+20666334 MS.gene057165:CDS
GGCCCTGTTCAAGCATTGCC+CGG 0.533555 8.1:-20666702 None:intergenic
GTGGATGTTGCTAAAGAAGT+TGG 0.533691 8.1:+20664541 MS.gene057165:CDS
AGCCCTTAAATATGCAGAGT+TGG 0.534651 8.1:+20666438 MS.gene057165:CDS
CTGTCTCCCATGGGTGTACA+GGG 0.536193 8.1:+20664572 MS.gene057165:CDS
TCCCATGGGTGTACAGGGAA+AGG 0.539361 8.1:+20664577 MS.gene057165:CDS
AGCCTCCCAATTAGTCGTAA+AGG 0.540721 8.1:+20664121 MS.gene057165:CDS
AATCCATCTATAGCAGGGAT+AGG 0.548987 8.1:+20664845 MS.gene057165:CDS
GTGGAAAGCACGGAATTGGC+CGG 0.550439 8.1:+20666272 MS.gene057165:CDS
TATGATCAAGCTGATGCTGC+TGG 0.551145 8.1:+20666646 MS.gene057165:CDS
CCAGCACCGACACTAGCTCT+TGG 0.552890 8.1:-20662726 None:intergenic
GTACTTGCTTGGGACCTCAA+TGG 0.557948 8.1:+20664214 MS.gene057165:CDS
AAGGAGAACCTGTTGCATGA+AGG 0.558077 8.1:-20662394 None:intergenic
GAGCCACAATGTTTAGCTTG+GGG 0.558250 8.1:-20664738 None:intergenic
ATAGCAGGGATAGGAACCTA+TGG 0.560895 8.1:+20664854 MS.gene057165:CDS
CCCGGCTAATGAACCCAAGA+AGG 0.563898 8.1:+20665734 MS.gene057165:CDS
TCCGAAGCCAAGAAGGGTAG+CGG 0.564921 8.1:+20663322 MS.gene057165:CDS
CCGAAGCCAAGAAGGGTAGC+GGG 0.565040 8.1:+20663323 MS.gene057165:CDS
TCATTGGAAGACCGTAAAGC+CGG 0.568825 8.1:-20666675 None:intergenic
GTAGTAGCGCATAGATGTGA+AGG 0.570777 8.1:-20662362 None:intergenic
CAAAGTAACAGAACCTGTTG+TGG 0.572279 8.1:-20666530 None:intergenic
TGAAGATTCCGAAGCCAAGA+AGG 0.576232 8.1:+20663315 MS.gene057165:CDS
TATGCAGAGTTGGTGTATGC+TGG 0.582525 8.1:+20666448 MS.gene057165:CDS
CAACATATATACCTCAACCA+TGG 0.584663 8.1:-20663412 None:intergenic
GAACCTGTTGCATGAAGGGA+AGG 0.585609 8.1:-20662389 None:intergenic
GCGTCCATCGACTCACGAAG+TGG 0.588223 8.1:-20666484 None:intergenic
AACATATATACCTCAACCAT+GGG 0.591621 8.1:-20663411 None:intergenic
CGGAATTGGCCGGATCGACA+TGG 0.592013 8.1:+20666282 MS.gene057165:CDS
AAACATTGTGGCTCCATGGA+GGG 0.593118 8.1:+20664747 MS.gene057165:CDS
GGCCCGTCCTGTAATTGCAA+AGG 0.597766 8.1:+20664235 MS.gene057165:CDS
ACTTGATCGAGAAACAATAC+AGG 0.598769 8.1:+20666402 MS.gene057165:CDS
CCTCATGGCTAAGATGCCAT+AGG 0.600016 8.1:-20664870 None:intergenic
ATGGCACCAGCACGCAAGCA+AGG 0.605414 8.1:-20664179 None:intergenic
GAAGATTCCGAAGCCAAGAA+GGG 0.607784 8.1:+20663316 MS.gene057165:CDS
AATTACAGGACGGGCCATTG+AGG 0.609012 8.1:-20664228 None:intergenic
TGTGGCTCCATGGAGGGAGT+GGG 0.609883 8.1:+20664753 MS.gene057165:CDS
ACACATCAGTCATTGTCCCA+TGG 0.619335 8.1:+20663395 MS.gene057165:CDS
GTCCTTTACGACTAATTGGG+AGG 0.620171 8.1:-20664123 None:intergenic
GTTACTTTGAAATTGTACAA+AGG 0.620393 8.1:+20666544 MS.gene057165:CDS
TGCTGACTGGTAGGCCATGG+TGG 0.621627 8.1:+20664522 MS.gene057165:intron
GTACATGATGTCTGTAGACC+CGG 0.626351 8.1:+20665761 MS.gene057165:CDS
GTCCGGGCAATGCTTGAACA+GGG 0.642826 8.1:+20666700 MS.gene057165:CDS
TAGGGTATAAAAGAATTGGA+CGG 0.644179 8.1:+20664071 MS.gene057165:intron
GCTGAGCTCAATGAGATAGG+TGG 0.646043 8.1:+20666253 MS.gene057165:CDS
AATGAGATAGGTGGAAAGCA+CGG 0.647318 8.1:+20666262 MS.gene057165:CDS
TTCTTTAGCAACATCCACCA+TGG 0.653712 8.1:-20664536 None:intergenic
GAGTTTATGAAACTCCTGGT+GGG 0.653894 8.1:+20666338 MS.gene057165:CDS
GGAGTTTATGAAACTCCTGG+TGG 0.659690 8.1:+20666337 MS.gene057165:CDS
AGTCGTAAAGGACTTGAAGG+AGG 0.661011 8.1:+20664133 MS.gene057165:CDS
GAAGCCAAAGCAAAAGCCAG+TGG 0.662975 8.1:+20664098 MS.gene057165:CDS
CTTGTAGGCATGAAGAGCCG+CGG 0.663600 8.1:+20666316 MS.gene057165:CDS
GAACCCCAAGCTAAACATTG+TGG 0.664560 8.1:+20664735 MS.gene057165:CDS
AAGAAGGGTAGCGGGCTACG+TGG 0.672202 8.1:+20663331 MS.gene057165:CDS
TAAACATTGTGGCTCCATGG+AGG 0.674929 8.1:+20664746 MS.gene057165:CDS
AAGGTTGTACTTGCTTACAG+TGG 0.676821 8.1:+20663364 MS.gene057165:CDS
GTACCTTTGCAATTACAGGA+CGG 0.677711 8.1:-20664238 None:intergenic
GTATCACGCAGTCATACGGA+TGG 0.685063 8.1:+20663292 MS.gene057165:CDS
GGAGGGAGTGGGATATTACA+GGG 0.688013 8.1:+20664764 MS.gene057165:CDS
TTGAAACCAAGAGCTAGTGT+CGG 0.691852 8.1:+20662720 MS.gene057165:CDS
GTGCTGGTGCCATTTATGAG+AGG 0.694541 8.1:+20664189 MS.gene057165:CDS
CCTATGGCATCTTAGCCATG+AGG 0.721010 8.1:+20664870 MS.gene057165:CDS
CAGGAGTTTCATAAACTCCG+CGG 0.735124 8.1:-20666333 None:intergenic
CATGATGTCTGTAGACCCGG+AGG 0.809606 8.1:+20665764 MS.gene057165:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATCTTATTTAATGATTT+TGG + chr8.1:20663827-20663846 MS.gene057165:intron 10.0%
!! AATGTAATGAAAATCAATAA+AGG - chr8.1:20662505-20662524 None:intergenic 15.0%
!! ATGTAATGAAAATCAATAAA+GGG - chr8.1:20662504-20662523 None:intergenic 15.0%
!! CAACATATAAAGAATAAAAT+TGG - chr8.1:20663094-20663113 None:intergenic 15.0%
!! TAGAAAAATAAAAAAGAACA+AGG - chr8.1:20663438-20663457 None:intergenic 15.0%
!!! ATGTTTTAACTTAAAGAATA+TGG - chr8.1:20662973-20662992 None:intergenic 15.0%
!!! CAATTTTATTCTTTATATGT+TGG + chr8.1:20663092-20663111 MS.gene057165:intron 15.0%
!! AACAAAATCAATTTCGTATA+GGG + chr8.1:20664053-20664072 MS.gene057165:intron 20.0%
!! AGAACAAATTATACAACAAT+AGG - chr8.1:20663801-20663820 None:intergenic 20.0%
!! ATCTAATCAATATAATCAAC+TGG - chr8.1:20663203-20663222 None:intergenic 20.0%
!! ATTAAAGGACAACATTAATA+AGG - chr8.1:20665198-20665217 None:intergenic 20.0%
!! GTTAATGACATTCAAAAAAT+GGG - chr8.1:20662469-20662488 None:intergenic 20.0%
!! GTTATAAGATTGTAAATATC+CGG + chr8.1:20663979-20663998 MS.gene057165:intron 20.0%
!! TAACAAAATCAATTTCGTAT+AGG + chr8.1:20664052-20664071 MS.gene057165:intron 20.0%
!! TCCATTCTTCAAATAATAAT+CGG + chr8.1:20664382-20664401 MS.gene057165:intron 20.0%
!! TCTTTATTCAGAATATACAA+AGG - chr8.1:20663492-20663511 None:intergenic 20.0%
!! TGTTAATGACATTCAAAAAA+TGG - chr8.1:20662470-20662489 None:intergenic 20.0%
!! TTAATGACATTCAAAAAATG+GGG - chr8.1:20662468-20662487 None:intergenic 20.0%
!! TTACAATTACTATGAAGAAA+TGG - chr8.1:20664440-20664459 None:intergenic 20.0%
!! TTCCAACAAAAGATAATTAA+AGG - chr8.1:20665213-20665232 None:intergenic 20.0%
!!! GATTTGTTTGTTTTTTCATT+GGG + chr8.1:20664956-20664975 MS.gene057165:intron 20.0%
!!! TCTTTGAAGGAAAAAAATTA+TGG + chr8.1:20665421-20665440 MS.gene057165:intron 20.0%
!!! TGAGCATTCTTTAAAAAAAA+GGG - chr8.1:20663704-20663723 None:intergenic 20.0%
!!! TGATTTGTTTGTTTTTTCAT+TGG + chr8.1:20664955-20664974 MS.gene057165:intron 20.0%
!!! TTCTGTTATGCTTTTAAAAA+GGG + chr8.1:20666090-20666109 MS.gene057165:intron 20.0%
!!! TTTAATTATCTTTTGTTGGA+AGG + chr8.1:20665212-20665231 MS.gene057165:intron 20.0%
!!! TTTCTGTTATGCTTTTAAAA+AGG + chr8.1:20666089-20666108 MS.gene057165:intron 20.0%
!!! TTTTATAGACCATTCTTTAA+AGG - chr8.1:20665038-20665057 None:intergenic 20.0%
! AAAAAAATCCATCTATAGCA+GGG + chr8.1:20664840-20664859 MS.gene057165:CDS 25.0%
! AACAATAGGTAACTTCAAAA+TGG - chr8.1:20663787-20663806 None:intergenic 25.0%
! AACAGATAGACAAAATGATA+TGG + chr8.1:20665341-20665360 MS.gene057165:intron 25.0%
! AAGAATATGGTTTCAAATTG+CGG - chr8.1:20662960-20662979 None:intergenic 25.0%
! ACAGATAGACAAAATGATAT+GGG + chr8.1:20665342-20665361 MS.gene057165:intron 25.0%
! ACCGATTATTATTTGAAGAA+TGG - chr8.1:20664386-20664405 None:intergenic 25.0%
! AGAGAATATTCTGTTTAATC+GGG + chr8.1:20662576-20662595 MS.gene057165:intron 25.0%
! AGATCATATGAATCTTCAAA+GGG + chr8.1:20665532-20665551 MS.gene057165:intron 25.0%
! ATTCAACTACAAAGAACAAT+AGG - chr8.1:20663021-20663040 None:intergenic 25.0%
! ATTGCATGATTTATAAACCA+TGG + chr8.1:20662803-20662822 MS.gene057165:intron 25.0%
! CAACTACACAGATTAAAAAA+GGG - chr8.1:20662703-20662722 None:intergenic 25.0%
! CAGAGAATATTCTGTTTAAT+CGG + chr8.1:20662575-20662594 MS.gene057165:intron 25.0%
! CATAATTATTCAATAGCATG+TGG + chr8.1:20662990-20663009 MS.gene057165:intron 25.0%
! CATTAGACTTAACTATCAAA+CGG - chr8.1:20663227-20663246 None:intergenic 25.0%
! CTAATAGATCTATAGATTCT+GGG + chr8.1:20665098-20665117 MS.gene057165:intron 25.0%
! CTATTAACTAATGATCTGTT+TGG + chr8.1:20665827-20665846 MS.gene057165:intron 25.0%
! CTTTATATGTTGGAAATGAA+TGG + chr8.1:20663102-20663121 MS.gene057165:intron 25.0%
! TCAACTACACAGATTAAAAA+AGG - chr8.1:20662704-20662723 None:intergenic 25.0%
! TCTAATAGATCTATAGATTC+TGG + chr8.1:20665097-20665116 MS.gene057165:intron 25.0%
! TTGAAGCTGTATATATAGTT+GGG - chr8.1:20666068-20666087 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr8.1:20666041-20666060 MS.gene057165:intron 25.0%
!! CTGAGCATTCTTTAAAAAAA+AGG - chr8.1:20663705-20663724 None:intergenic 25.0%
!! GTCCTTTAATTATCTTTTGT+TGG + chr8.1:20665208-20665227 MS.gene057165:intron 25.0%
!! GTCTGAAATTGTTTATCTTT+GGG + chr8.1:20665646-20665665 MS.gene057165:intron 25.0%
!! TGTCTGAAATTGTTTATCTT+TGG + chr8.1:20665645-20665664 MS.gene057165:intron 25.0%
!! TTAAGATTTAAGACCTTATC+AGG + chr8.1:20663048-20663067 MS.gene057165:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr8.1:20666042-20666061 MS.gene057165:intron 25.0%
!!! GTTACTTTGAAATTGTACAA+AGG + chr8.1:20666544-20666563 MS.gene057165:CDS 25.0%
!!! TACGAAATTGATTTTGTTAC+CGG - chr8.1:20664051-20664070 None:intergenic 25.0%
AAAGAATGCTCAGTAATTTG+AGG + chr8.1:20663507-20663526 MS.gene057165:intron 30.0%
AACATATATACCTCAACCAT+GGG - chr8.1:20663414-20663433 None:intergenic 30.0%
AACTAATGATCTGTTTGGAT+TGG + chr8.1:20665832-20665851 MS.gene057165:intron 30.0%
AAGAATGCTCAGTAATTTGA+GGG + chr8.1:20663508-20663527 MS.gene057165:intron 30.0%
ACCAACTCTATTACTTTGAA+AGG - chr8.1:20665015-20665034 None:intergenic 30.0%
ATACAAAGGTTCACAAAGAA+CGG - chr8.1:20662860-20662879 None:intergenic 30.0%
ATATTCTGTTTAATCGGGTT+TGG + chr8.1:20662581-20662600 MS.gene057165:CDS 30.0%
ATCATGTACATATCCTTCTT+GGG - chr8.1:20665750-20665769 None:intergenic 30.0%
ATCTGTTACAGAATGAATGA+AGG - chr8.1:20665328-20665347 None:intergenic 30.0%
ATGCTGTCTAAATTGGTTAT+TGG + chr8.1:20663949-20663968 MS.gene057165:intron 30.0%
ATTACTATGAAGAAATGGCA+CGG - chr8.1:20664435-20664454 None:intergenic 30.0%
ATTCAGAATATACAAAGGAG+AGG - chr8.1:20663487-20663506 None:intergenic 30.0%
ATTGTAATTGACGATGATAG+TGG + chr8.1:20664453-20664472 MS.gene057165:intron 30.0%
CAAAAAAATCCATCTATAGC+AGG + chr8.1:20664839-20664858 MS.gene057165:CDS 30.0%
CAAGATATCTCATCATTTGA+GGG + chr8.1:20666613-20666632 MS.gene057165:CDS 30.0%
CAGATAGACAAAATGATATG+GGG + chr8.1:20665343-20665362 MS.gene057165:intron 30.0%
CATGATTATGCTGTCTAAAT+TGG + chr8.1:20663942-20663961 MS.gene057165:intron 30.0%
CATGATTTCTTGCAGATATT+TGG + chr8.1:20666162-20666181 MS.gene057165:intron 30.0%
CCATCTAACAAACATTAATG+TGG - chr8.1:20665305-20665324 None:intergenic 30.0%
CGTATAGGGTATAAAAGAAT+TGG + chr8.1:20664067-20664086 MS.gene057165:intron 30.0%
CTAAAGTAAAGACATTTGTG+TGG - chr8.1:20665148-20665167 None:intergenic 30.0%
CTTGAAGCTGTATATATAGT+TGG - chr8.1:20666069-20666088 None:intergenic 30.0%
CTTGTCTGCTATTGAATTTA+AGG + chr8.1:20664980-20664999 MS.gene057165:intron 30.0%
GAGATCATATGAATCTTCAA+AGG + chr8.1:20665531-20665550 MS.gene057165:intron 30.0%
GTATATTAGCATCCTTTAGA+CGG - chr8.1:20665238-20665257 None:intergenic 30.0%
GTGTGCTTTCAAAAAATGTA+AGG - chr8.1:20666143-20666162 None:intergenic 30.0%
TAACCCATGTTCATTCAAAA+AGG + chr8.1:20662609-20662628 MS.gene057165:CDS 30.0%
TAGGGTATAAAAGAATTGGA+CGG + chr8.1:20664071-20664090 MS.gene057165:intron 30.0%
TAGTTAATAGAACCATGAGA+AGG - chr8.1:20665817-20665836 None:intergenic 30.0%
TATAAAAGAATTGGACGGTT+TGG + chr8.1:20664076-20664095 MS.gene057165:CDS 30.0%
TCCTTTCAAAGTAATAGAGT+TGG + chr8.1:20665011-20665030 MS.gene057165:intron 30.0%
TCTAAATTGGTTATTGGAAG+AGG + chr8.1:20663955-20663974 MS.gene057165:intron 30.0%
TCTTGCAGATATTTGGAAAT+TGG + chr8.1:20666169-20666188 MS.gene057165:intron 30.0%
TTGAAAAGTAACGACATACT+TGG - chr8.1:20663906-20663925 None:intergenic 30.0%
TTGAAAGTGGATAAATTCAG+TGG + chr8.1:20663161-20663180 MS.gene057165:intron 30.0%
! AATCCACATACAGTTTTCAA+TGG - chr8.1:20662786-20662805 None:intergenic 30.0%
! ATCACCTTTTTGAATGAACA+TGG - chr8.1:20662616-20662635 None:intergenic 30.0%
! CCACATTAATGTTTGTTAGA+TGG + chr8.1:20665302-20665321 MS.gene057165:intron 30.0%
! CCTCAACATCTTTTATATTG+CGG + chr8.1:20662927-20662946 MS.gene057165:intron 30.0%
! CTAGTTGTAGTGTTGAATAT+TGG + chr8.1:20664922-20664941 MS.gene057165:intron 30.0%
! GAAATCCTATCATTTGTTAC+CGG + chr8.1:20665502-20665521 MS.gene057165:intron 30.0%
! GCTTGTTTGAGTTTATTTAC+TGG + chr8.1:20665854-20665873 MS.gene057165:intron 30.0%
! TAAGGAACTAAATTGATGAC+TGG - chr8.1:20665180-20665199 None:intergenic 30.0%
! TCACCTTTTTGAATGAACAT+GGG - chr8.1:20662615-20662634 None:intergenic 30.0%
!! AGTAAGCTAAAAGCATCTTA+TGG - chr8.1:20665935-20665954 None:intergenic 30.0%
!! GCTTATCTTTAGTTTGATCT+AGG + chr8.1:20665594-20665613 MS.gene057165:intron 30.0%
!!! TAGATGGATTTTTTTGTCAC+CGG - chr8.1:20664835-20664854 None:intergenic 30.0%
AAAGTGGATAAATTCAGTGG+AGG + chr8.1:20663164-20663183 MS.gene057165:intron 35.0%
ACACCAACTCTGCATATTTA+AGG - chr8.1:20666444-20666463 None:intergenic 35.0%
ACTTGATCGAGAAACAATAC+AGG + chr8.1:20666402-20666421 MS.gene057165:CDS 35.0%
AGAATGCTCAGTAATTTGAG+GGG + chr8.1:20663509-20663528 MS.gene057165:intron 35.0%
AGAGATGTAGTTTAATCGAG+TGG + chr8.1:20663738-20663757 MS.gene057165:intron 35.0%
ATGAGATATCTTGCCTATAC+AGG - chr8.1:20666606-20666625 None:intergenic 35.0%
ATTAGTCGTAAAGGACTTGA+AGG + chr8.1:20664130-20664149 MS.gene057165:CDS 35.0%
CAACATATATACCTCAACCA+TGG - chr8.1:20663415-20663434 None:intergenic 35.0%
CAAGTACTTCCTCTCATAAA+TGG - chr8.1:20664201-20664220 None:intergenic 35.0%
CAAGTCCTTTACGACTAATT+GGG - chr8.1:20664129-20664148 None:intergenic 35.0%
CACCAACTCTGCATATTTAA+GGG - chr8.1:20666443-20666462 None:intergenic 35.0%
CATCACGTTAATACCTGATA+AGG - chr8.1:20663064-20663083 None:intergenic 35.0%
CATCATGTACATATCCTTCT+TGG - chr8.1:20665751-20665770 None:intergenic 35.0%
CCGCAATATAAAAGATGTTG+AGG - chr8.1:20662930-20662949 None:intergenic 35.0%
CTGAGTAAAACAAATTCTCC+TGG - chr8.1:20664005-20664024 None:intergenic 35.0%
CTTTGTATTGCAGCGATATT+CGG + chr8.1:20662872-20662891 MS.gene057165:intron 35.0%
GATCCATTGAAAACTGTATG+TGG + chr8.1:20662780-20662799 MS.gene057165:intron 35.0%
GATGACACTTGAATCTTTGA+AGG + chr8.1:20665408-20665427 MS.gene057165:intron 35.0%
GCAAGATATCTCATCATTTG+AGG + chr8.1:20666612-20666631 MS.gene057165:CDS 35.0%
GCATCTTATGGACATATCAT+AGG - chr8.1:20665923-20665942 None:intergenic 35.0%
GCTACGTGGAAAATTGAATA+AGG + chr8.1:20663345-20663364 MS.gene057165:CDS 35.0%
GTAGTTTAATCGAGTGGAAT+GGG + chr8.1:20663744-20663763 MS.gene057165:intron 35.0%
TATAAACCATGGTGAATCTG+TGG + chr8.1:20662814-20662833 MS.gene057165:intron 35.0%
TATACATGTGTCTGCATGTT+TGG + chr8.1:20665253-20665272 MS.gene057165:intron 35.0%
TCAAGTCCTTTACGACTAAT+TGG - chr8.1:20664130-20664149 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr8.1:20663604-20663623 MS.gene057165:intron 35.0%
TGTAGTTTAATCGAGTGGAA+TGG + chr8.1:20663743-20663762 MS.gene057165:intron 35.0%
TTAAAACCACAGATTCACCA+TGG - chr8.1:20662823-20662842 None:intergenic 35.0%
TTCATATGATCTCTTGAGAC+CGG - chr8.1:20665524-20665543 None:intergenic 35.0%
TTCATGACATGCAGTTGTAA+AGG + chr8.1:20663267-20663286 MS.gene057165:intron 35.0%
! AGAGTTGGTCCTTTAAAGAA+TGG + chr8.1:20665026-20665045 MS.gene057165:intron 35.0%
! ATGCAATCTGTGTCACTAAA+GGG + chr8.1:20665696-20665715 MS.gene057165:intron 35.0%
! CATCTTTTATATTGCGGTTG+CGG + chr8.1:20662933-20662952 MS.gene057165:intron 35.0%
! CTTTAAAAAAAAGGGCAACC+CGG - chr8.1:20663696-20663715 None:intergenic 35.0%
! GTCACTAAAGGGTGATATTT+TGG + chr8.1:20665707-20665726 MS.gene057165:intron 35.0%
! TATGCAATCTGTGTCACTAA+AGG + chr8.1:20665695-20665714 MS.gene057165:intron 35.0%
! TTGGAAATTGGTATTGAGTC+TGG + chr8.1:20666181-20666200 MS.gene057165:CDS 35.0%
!! AGGGTGCTTACTATTGTTTT+TGG + chr8.1:20666109-20666128 MS.gene057165:intron 35.0%
!! CTGTAATTGCAAAGGTACTT+CGG + chr8.1:20664243-20664262 MS.gene057165:intron 35.0%
!! GTGCTTTTTAGCATACTCAA+TGG - chr8.1:20664800-20664819 None:intergenic 35.0%
!!! CTATCCTTTTTAAAGCAGCA+CGG + chr8.1:20666362-20666381 MS.gene057165:CDS 35.0%
!!! GAATCTGTGGTTTTAAACTG+CGG + chr8.1:20662827-20662846 MS.gene057165:intron 35.0%
!!! TATCCTTTTTAAAGCAGCAC+GGG + chr8.1:20666363-20666382 MS.gene057165:CDS 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr8.1:20663605-20663624 None:intergenic 35.0%
AAACACCTGTGAGACTCTTT+GGG + chr8.1:20665880-20665899 MS.gene057165:intron 40.0%
AAAGGTTCTGTTACTGTAGC+AGG + chr8.1:20666562-20666581 MS.gene057165:CDS 40.0%
AAGATTGTAAATATCCGGCC+AGG + chr8.1:20663984-20664003 MS.gene057165:intron 40.0%
AAGCTATCCTTGAGAGCTTA+TGG - chr8.1:20665959-20665978 None:intergenic 40.0%
AAGGTTGTACTTGCTTACAG+TGG + chr8.1:20663364-20663383 MS.gene057165:CDS 40.0%
AATCCATCTATAGCAGGGAT+AGG + chr8.1:20664845-20664864 MS.gene057165:CDS 40.0%
AATGAGATAGGTGGAAAGCA+CGG + chr8.1:20666262-20666281 MS.gene057165:CDS 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr8.1:20663598-20663617 MS.gene057165:intron 40.0%
AGAGAGCGAAATGAAAACGA+AGG - chr8.1:20662416-20662435 None:intergenic 40.0%
AGAGGATTGTGAACTTGTGA+TGG - chr8.1:20663469-20663488 None:intergenic 40.0%
AGCCCTTAAATATGCAGAGT+TGG + chr8.1:20666438-20666457 MS.gene057165:CDS 40.0%
AGTAATTTGAGGGGTAACCT+TGG + chr8.1:20663518-20663537 MS.gene057165:intron 40.0%
ATACTTATCCACCGTATCTG+TGG + chr8.1:20664479-20664498 MS.gene057165:intron 40.0%
ATATATAGTTGGGCCCTGTT+TGG - chr8.1:20666058-20666077 None:intergenic 40.0%
ATGATATGGGGTCACTAAAC+TGG + chr8.1:20665355-20665374 MS.gene057165:intron 40.0%
ATGGTTGAGAATAGGCTTGT+AGG + chr8.1:20666301-20666320 MS.gene057165:CDS 40.0%
CAAACATTAATGTGGTGCGT+AGG - chr8.1:20665297-20665316 None:intergenic 40.0%
CAAAGTAACAGAACCTGTTG+TGG - chr8.1:20666533-20666552 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr8.1:20663599-20663618 MS.gene057165:intron 40.0%
CAGTACAACAACCACAGATA+CGG - chr8.1:20664493-20664512 None:intergenic 40.0%
CGAATATCGCTGCAATACAA+AGG - chr8.1:20662874-20662893 None:intergenic 40.0%
CGCAGTAATCTTCTGCATAA+AGG - chr8.1:20666509-20666528 None:intergenic 40.0%
CTACAACTAGAGCTAGATTG+AGG - chr8.1:20664912-20664931 None:intergenic 40.0%
CTTACTTCCATAAGCTCTCA+AGG + chr8.1:20665949-20665968 MS.gene057165:intron 40.0%
GCGATATTCGGTCAAAATTG+TGG + chr8.1:20662884-20662903 MS.gene057165:intron 40.0%
GTAAAACAAATTCTCCTGGC+CGG - chr8.1:20664001-20664020 None:intergenic 40.0%
GTACCTTTGCAATTACAGGA+CGG - chr8.1:20664241-20664260 None:intergenic 40.0%
GTCAGTGTAAAACACTGACA+CGG - chr8.1:20664328-20664347 None:intergenic 40.0%
GTGGATGTTGCTAAAGAAGT+TGG + chr8.1:20664541-20664560 MS.gene057165:CDS 40.0%
TAAACACCTGTGAGACTCTT+TGG + chr8.1:20665879-20665898 MS.gene057165:intron 40.0%
TAACCACAAAGCATACCTCA+TGG - chr8.1:20664888-20664907 None:intergenic 40.0%
TACAGGGAAAGGAAATGATC+AGG + chr8.1:20664588-20664607 MS.gene057165:CDS 40.0%
TACCTTTGCAATTACAGGAC+GGG - chr8.1:20664240-20664259 None:intergenic 40.0%
TATTCTCAACCATGTCGATC+CGG - chr8.1:20666294-20666313 None:intergenic 40.0%
TCTGTTTAATCGGGTTTGGA+AGG + chr8.1:20662585-20662604 MS.gene057165:CDS 40.0%
TCTTGCCTATACAGGCTAAA+AGG - chr8.1:20666598-20666617 None:intergenic 40.0%
TGAGACCGGTAACAAATGAT+AGG - chr8.1:20665510-20665529 None:intergenic 40.0%
TTAAAAAGGATAGTCCCACC+AGG - chr8.1:20666355-20666374 None:intergenic 40.0%
TTCTTTAGCAACATCCACCA+TGG - chr8.1:20664539-20664558 None:intergenic 40.0%
TTGAAACCAAGAGCTAGTGT+CGG + chr8.1:20662720-20662739 MS.gene057165:CDS 40.0%
TTGTTGATGTGCTACATGTC+CGG + chr8.1:20664029-20664048 MS.gene057165:intron 40.0%
! ACGCCTTTAATCTGAAGTGT+TGG - chr8.1:20664290-20664309 None:intergenic 40.0%
! AGAGTCCTTTTAGCCTGTAT+AGG + chr8.1:20666590-20666609 MS.gene057165:CDS 40.0%
! ATTTGCGTCGATGTTGAAAG+TGG + chr8.1:20663148-20663167 MS.gene057165:intron 40.0%
! CGAAGTACCTTTGCAATTAC+AGG - chr8.1:20664245-20664264 None:intergenic 40.0%
! CGCCTTTAATCTGAAGTGTT+GGG - chr8.1:20664289-20664308 None:intergenic 40.0%
! GCATGTTTGGAAGCACATAT+GGG + chr8.1:20665266-20665285 MS.gene057165:intron 40.0%
! TGCATGTTTGGAAGCACATA+TGG + chr8.1:20665265-20665284 MS.gene057165:intron 40.0%
!! ATGAGAGGAAGTACTTGCTT+GGG + chr8.1:20664204-20664223 MS.gene057165:CDS 40.0%
!! CCTTTAATCTGAAGTGTTGG+GGG - chr8.1:20664287-20664306 None:intergenic 40.0%
!! GCCTTTAATCTGAAGTGTTG+GGG - chr8.1:20664288-20664307 None:intergenic 40.0%
!! TATGAGAGGAAGTACTTGCT+TGG + chr8.1:20664203-20664222 MS.gene057165:CDS 40.0%
!!! GATTTTTTTGTCACCGGAAC+GGG - chr8.1:20664829-20664848 None:intergenic 40.0%
!!! GGATTTTTTTGTCACCGGAA+CGG - chr8.1:20664830-20664849 None:intergenic 40.0%
AAACATTGTGGCTCCATGGA+GGG + chr8.1:20664747-20664766 MS.gene057165:CDS 45.0%
AAGATTACTGCGACCACAAC+AGG + chr8.1:20666517-20666536 MS.gene057165:CDS 45.0%
AAGGAGAACCTGTTGCATGA+AGG - chr8.1:20662397-20662416 None:intergenic 45.0%
ACACATCAGTCATTGTCCCA+TGG + chr8.1:20663395-20663414 MS.gene057165:CDS 45.0%
AGCCTCCCAATTAGTCGTAA+AGG + chr8.1:20664121-20664140 MS.gene057165:CDS 45.0%
AGCTAAACATTGTGGCTCCA+TGG + chr8.1:20664743-20664762 MS.gene057165:CDS 45.0%
AGGAGAACCTGTTGCATGAA+GGG - chr8.1:20662396-20662415 None:intergenic 45.0%
AGTCGTAAAGGACTTGAAGG+AGG + chr8.1:20664133-20664152 MS.gene057165:CDS 45.0%
ATAGCAGGGATAGGAACCTA+TGG + chr8.1:20664854-20664873 MS.gene057165:CDS 45.0%
CAGAGTAAGCTTCCTTCTCA+TGG + chr8.1:20665802-20665821 MS.gene057165:intron 45.0%
CCCCCAACACTTCAGATTAA+AGG + chr8.1:20664284-20664303 MS.gene057165:intron 45.0%
CGTCTTGCCATTGAGTGAAA+CGG - chr8.1:20666212-20666231 None:intergenic 45.0%
CGTGCAATACACCAAATGGT+GGG + chr8.1:20663630-20663649 MS.gene057165:intron 45.0%
GAACCCCAAGCTAAACATTG+TGG + chr8.1:20664735-20664754 MS.gene057165:CDS 45.0%
GAAGATTCCGAAGCCAAGAA+GGG + chr8.1:20663316-20663335 MS.gene057165:CDS 45.0%
GAAGCTTACTCTGCTTGATC+TGG - chr8.1:20665795-20665814 None:intergenic 45.0%
GACTTGAACCCATGACCTTA+CGG - chr8.1:20663572-20663591 None:intergenic 45.0%
GCTTTACGGTCTTCCAATGA+AGG + chr8.1:20666678-20666697 MS.gene057165:CDS 45.0%
GGATCGACATGGTTGAGAAT+AGG + chr8.1:20666293-20666312 MS.gene057165:CDS 45.0%
GTAAAACACTGACACGGTGT+TGG - chr8.1:20664322-20664341 None:intergenic 45.0%
GTACATGATGTCTGTAGACC+CGG + chr8.1:20665761-20665780 MS.gene057165:CDS 45.0%
GTAGTAGCGCATAGATGTGA+AGG - chr8.1:20662365-20662384 None:intergenic 45.0%
GTCCTTTACGACTAATTGGG+AGG - chr8.1:20664126-20664145 None:intergenic 45.0%
GTCTTGCCATTGAGTGAAAC+GGG - chr8.1:20666211-20666230 None:intergenic 45.0%
GTTCCTATCCCTGCTATAGA+TGG - chr8.1:20664851-20664870 None:intergenic 45.0%
GTTGTACTTGCTTACAGTGG+TGG + chr8.1:20663367-20663386 MS.gene057165:CDS 45.0%
GTTGTTGTCATGTGACCGTA+AGG + chr8.1:20663554-20663573 MS.gene057165:intron 45.0%
TAAACATTGTGGCTCCATGG+AGG + chr8.1:20664746-20664765 MS.gene057165:CDS 45.0%
TACAACAACCACAGATACGG+TGG - chr8.1:20664490-20664509 None:intergenic 45.0%
TAGCCATGAGGTATGCTTTG+TGG + chr8.1:20664882-20664901 MS.gene057165:intron 45.0%
TATGATCAAGCTGATGCTGC+TGG + chr8.1:20666646-20666665 MS.gene057165:CDS 45.0%
TCATGTGACCGTAAGGTCAT+GGG + chr8.1:20663561-20663580 MS.gene057165:intron 45.0%
TCATTGGAAGACCGTAAAGC+CGG - chr8.1:20666678-20666697 None:intergenic 45.0%
TCCTTCTTGGGTTCATTAGC+CGG - chr8.1:20665738-20665757 None:intergenic 45.0%
TGAAGATTCCGAAGCCAAGA+AGG + chr8.1:20663315-20663334 MS.gene057165:CDS 45.0%
TGACATGTCCGTGTTATGTC+CGG + chr8.1:20664406-20664425 MS.gene057165:intron 45.0%
TGGAGCCACAATGTTTAGCT+TGG - chr8.1:20664743-20664762 None:intergenic 45.0%
TTTGTTGGAAGGCCGTCTAA+AGG + chr8.1:20665223-20665242 MS.gene057165:intron 45.0%
! AGTTGGTGTATGCTGGTAGA+TGG + chr8.1:20666455-20666474 MS.gene057165:CDS 45.0%
! ATAGGTGGAAAGCACGGAAT+TGG + chr8.1:20666268-20666287 MS.gene057165:CDS 45.0%
! GGAGCCACAATGTTTAGCTT+GGG - chr8.1:20664742-20664761 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr8.1:20663594-20663613 None:intergenic 45.0%
!! ACTCCCGTGCTGCTTTAAAA+AGG - chr8.1:20666369-20666388 None:intergenic 45.0%
!! GAGCCACAATGTTTAGCTTG+GGG - chr8.1:20664741-20664760 None:intergenic 45.0%
!! GGGTGATATTTTGGAAGACC+CGG + chr8.1:20665716-20665735 MS.gene057165:intron 45.0%
!! TATGCAGAGTTGGTGTATGC+TGG + chr8.1:20666448-20666467 MS.gene057165:CDS 45.0%
!! TGGTGCTGCAGAGAGAATTA+TGG + chr8.1:20663847-20663866 MS.gene057165:intron 45.0%
!!! CTGATGCTGCTGGTTTTATC+CGG + chr8.1:20666656-20666675 MS.gene057165:CDS 45.0%
!!! GCTGGTTTTATCCGGCTTTA+CGG + chr8.1:20666664-20666683 MS.gene057165:CDS 45.0%
!!! TTTTAAAGCAGCACGGGAGT+TGG + chr8.1:20666369-20666388 MS.gene057165:CDS 45.0%
!!! TTATTTTTTTATAAACATTT+AGG + chr8.1:20664684-20664703 MS.gene057165:intron 5.0%
AAAGCACAACGTTCCCGTTC+CGG + chr8.1:20664813-20664832 MS.gene057165:CDS 50.0%
AAGGTCATGGGTTCAAGTCC+TGG + chr8.1:20663573-20663592 MS.gene057165:intron 50.0%
AATTACAGGACGGGCCATTG+AGG - chr8.1:20664231-20664250 None:intergenic 50.0%
ACGGTCTTCCAATGAAGGTC+CGG + chr8.1:20666683-20666702 MS.gene057165:CDS 50.0%
ACTCCTTCCCTTCATGCAAC+AGG + chr8.1:20662386-20662405 MS.gene057165:CDS 50.0%
AGCTCAGCGAGTAAAGTTGC+TGG - chr8.1:20666241-20666260 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr8.1:20663538-20663557 None:intergenic 50.0%
CAGTCATTGTCCCATGGTTG+AGG + chr8.1:20663401-20663420 MS.gene057165:CDS 50.0%
CCTATGGCATCTTAGCCATG+AGG + chr8.1:20664870-20664889 MS.gene057165:CDS 50.0%
CCTCATGGCTAAGATGCCAT+AGG - chr8.1:20664873-20664892 None:intergenic 50.0%
CCTTCTTGGGTTCATTAGCC+GGG - chr8.1:20665737-20665756 None:intergenic 50.0%
CTCGCTGAGCTCAATGAGAT+AGG + chr8.1:20666250-20666269 MS.gene057165:CDS 50.0%
GAACCTGTTGCATGAAGGGA+AGG - chr8.1:20662392-20662411 None:intergenic 50.0%
GAAGCCAAAGCAAAAGCCAG+TGG + chr8.1:20664098-20664117 MS.gene057165:CDS 50.0%
GCGTGCAATACACCAAATGG+TGG + chr8.1:20663629-20663648 MS.gene057165:intron 50.0%
GCTGAGCTCAATGAGATAGG+TGG + chr8.1:20666253-20666272 MS.gene057165:CDS 50.0%
GCTGCGTGCAATACACCAAA+TGG + chr8.1:20663626-20663645 MS.gene057165:intron 50.0%
GGACTTCCCGTTTCACTCAA+TGG + chr8.1:20666202-20666221 MS.gene057165:CDS 50.0%
GGAGGGAGTGGGATATTACA+GGG + chr8.1:20664764-20664783 MS.gene057165:CDS 50.0%
GGCAGTATCACGCAGTCATA+CGG + chr8.1:20663288-20663307 MS.gene057165:CDS 50.0%
GTAATATCCCACTCCCTCCA+TGG - chr8.1:20664763-20664782 None:intergenic 50.0%
GTACTTGCTTGGGACCTCAA+TGG + chr8.1:20664214-20664233 MS.gene057165:CDS 50.0%
GTATCACGCAGTCATACGGA+TGG + chr8.1:20663292-20663311 MS.gene057165:CDS 50.0%
GTATTTCCTTGCTTGCGTGC+TGG + chr8.1:20664173-20664192 MS.gene057165:CDS 50.0%
GTCATGTGACCGTAAGGTCA+TGG + chr8.1:20663560-20663579 MS.gene057165:intron 50.0%
GTGTGCTTCACTGCTGATGT+TGG + chr8.1:20663880-20663899 MS.gene057165:CDS 50.0%
GTTCTCCCAAAGAGTCTCAC+AGG - chr8.1:20665888-20665907 None:intergenic 50.0%
TCCTTTCCCTGTACACCCAT+GGG - chr8.1:20664581-20664600 None:intergenic 50.0%
TGAAGAAATGGCACGGACAC+CGG - chr8.1:20664428-20664447 None:intergenic 50.0%
TGATCCACTTCGTGAGTCGA+TGG + chr8.1:20666480-20666499 MS.gene057165:CDS 50.0%
TGGAGGGAGTGGGATATTAC+AGG + chr8.1:20664763-20664782 MS.gene057165:CDS 50.0%
TTCCTTTCCCTGTACACCCA+TGG - chr8.1:20664582-20664601 None:intergenic 50.0%
! ACTGATTGATCCGTGCTGAC+TGG + chr8.1:20664509-20664528 MS.gene057165:intron 50.0%
!! ATTGATCCGTGCTGACTGGT+AGG + chr8.1:20664513-20664532 MS.gene057165:intron 50.0%
!! GTGCTGGTGCCATTTATGAG+AGG + chr8.1:20664189-20664208 MS.gene057165:CDS 50.0%
ACTGAAGCTCCCGCATATGC+AGG - chr8.1:20663670-20663689 None:intergenic 55.0%
AGCATTGCCCGGACCTTCAT+TGG - chr8.1:20666694-20666713 None:intergenic 55.0%
CACGGACACCGGACATAACA+CGG - chr8.1:20664417-20664436 None:intergenic 55.0%
CATGATGTCTGTAGACCCGG+AGG + chr8.1:20665764-20665783 MS.gene057165:CDS 55.0%
CCCGGCTAATGAACCCAAGA+AGG + chr8.1:20665734-20665753 MS.gene057165:CDS 55.0%
CGGTCTTCCAATGAAGGTCC+GGG + chr8.1:20666684-20666703 MS.gene057165:CDS 55.0%
CTGAAGCTCCCGCATATGCA+GGG - chr8.1:20663669-20663688 None:intergenic 55.0%
CTGTCTCCCATGGGTGTACA+GGG + chr8.1:20664572-20664591 MS.gene057165:CDS 55.0%
CTTGTAGGCATGAAGAGCCG+CGG + chr8.1:20666316-20666335 MS.gene057165:CDS 55.0%
GACTAATTGGGAGGCTCCAC+TGG - chr8.1:20664117-20664136 None:intergenic 55.0%
GAGCTGATGCTGTCTCCCAT+GGG + chr8.1:20664563-20664582 MS.gene057165:CDS 55.0%
GGCCCGTCCTGTAATTGCAA+AGG + chr8.1:20664235-20664254 MS.gene057165:CDS 55.0%
GTCCGGGCAATGCTTGAACA+GGG + chr8.1:20666700-20666719 MS.gene057165:CDS 55.0%
TCCCATGGGTGTACAGGGAA+AGG + chr8.1:20664577-20664596 MS.gene057165:CDS 55.0%
TCCGAAGCCAAGAAGGGTAG+CGG + chr8.1:20663322-20663341 MS.gene057165:CDS 55.0%
! ACTGACACGGTGTTGGACAC+TGG - chr8.1:20664315-20664334 None:intergenic 55.0%
! CTTGATCTGGAGCATCCTCC+GGG - chr8.1:20665782-20665801 None:intergenic 55.0%
! GCTTGATCTGGAGCATCCTC+CGG - chr8.1:20665783-20665802 None:intergenic 55.0%
! GTGGAAAGCACGGAATTGGC+CGG + chr8.1:20666272-20666291 MS.gene057165:CDS 55.0%
!! GTCGGTGCTGGTAGACTTCA+AGG + chr8.1:20662738-20662757 MS.gene057165:CDS 55.0%
!!! GGCTCCACTGGCTTTTGCTT+TGG - chr8.1:20664105-20664124 None:intergenic 55.0%
ACGTAGCCCGCTACCCTTCT+TGG - chr8.1:20663332-20663351 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr8.1:20663527-20663546 MS.gene057165:intron 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + chr8.1:20663674-20663693 MS.gene057165:intron 60.0%
ATGGCACCAGCACGCAAGCA+AGG - chr8.1:20664182-20664201 None:intergenic 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr8.1:20663657-20663676 None:intergenic 60.0%
CCATGGCCTACCAGTCAGCA+CGG - chr8.1:20664522-20664541 None:intergenic 60.0%
CCCGCTACCCTTCTTGGCTT+CGG - chr8.1:20663326-20663345 None:intergenic 60.0%
CCGAAGCCAAGAAGGGTAGC+GGG + chr8.1:20663323-20663342 MS.gene057165:CDS 60.0%
CGGAATTGGCCGGATCGACA+TGG + chr8.1:20666282-20666301 MS.gene057165:CDS 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr8.1:20663657-20663676 MS.gene057165:intron 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr8.1:20663658-20663677 None:intergenic 60.0%
GCTGTCTCCCATGGGTGTAC+AGG + chr8.1:20664571-20664590 MS.gene057165:CDS 60.0%
GGAGCTGATGCTGTCTCCCA+TGG + chr8.1:20664562-20664581 MS.gene057165:CDS 60.0%
GGTCCGGGCAATGCTTGAAC+AGG + chr8.1:20666699-20666718 MS.gene057165:CDS 60.0%
TGTGGCTCCATGGAGGGAGT+GGG + chr8.1:20664753-20664772 MS.gene057165:CDS 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr8.1:20663658-20663677 MS.gene057165:intron 60.0%
TTGTGGCTCCATGGAGGGAG+TGG + chr8.1:20664752-20664771 MS.gene057165:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr8.1:20663642-20663661 MS.gene057165:intron 60.0%
! GGCCCTGTTCAAGCATTGCC+CGG - chr8.1:20666705-20666724 None:intergenic 60.0%
! TGCTGACTGGTAGGCCATGG+TGG + chr8.1:20664522-20664541 MS.gene057165:intron 60.0%
!! AAGAAGGGTAGCGGGCTACG+TGG + chr8.1:20663331-20663350 MS.gene057165:CDS 60.0%
!! CCAAGAGCTAGTGTCGGTGC+TGG + chr8.1:20662726-20662745 MS.gene057165:CDS 60.0%
!! CCAGCACCGACACTAGCTCT+TGG - chr8.1:20662729-20662748 None:intergenic 60.0%
!! GCGTCCATCGACTCACGAAG+TGG - chr8.1:20666487-20666506 None:intergenic 60.0%
CGCATATGCAGGGTCCGGGA+AGG - chr8.1:20663659-20663678 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr8.1:20663644-20663663 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr8.1:20663663-20663682 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr8.1:20663664-20663683 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + chr8.1:20663675-20663694 MS.gene057165:intron 65.0%
!! CCGTGCTGACTGGTAGGCCA+TGG + chr8.1:20664519-20664538 MS.gene057165:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 20662341 20666729 20662341 ID=MS.gene057165
chr8.1 mRNA 20662341 20666729 20662341 ID=MS.gene057165.t1;Parent=MS.gene057165
chr8.1 exon 20662341 20662407 20662341 ID=MS.gene057165.t1.exon1;Parent=MS.gene057165.t1
chr8.1 CDS 20662341 20662407 20662341 ID=cds.MS.gene057165.t1;Parent=MS.gene057165.t1
chr8.1 exon 20662578 20662630 20662578 ID=MS.gene057165.t1.exon2;Parent=MS.gene057165.t1
chr8.1 CDS 20662578 20662630 20662578 ID=cds.MS.gene057165.t1;Parent=MS.gene057165.t1
chr8.1 exon 20662720 20662759 20662720 ID=MS.gene057165.t1.exon3;Parent=MS.gene057165.t1
chr8.1 CDS 20662720 20662759 20662720 ID=cds.MS.gene057165.t1;Parent=MS.gene057165.t1
chr8.1 exon 20663281 20663422 20663281 ID=MS.gene057165.t1.exon4;Parent=MS.gene057165.t1
chr8.1 CDS 20663281 20663422 20663281 ID=cds.MS.gene057165.t1;Parent=MS.gene057165.t1
chr8.1 exon 20663858 20663906 20663858 ID=MS.gene057165.t1.exon5;Parent=MS.gene057165.t1
chr8.1 CDS 20663858 20663906 20663858 ID=cds.MS.gene057165.t1;Parent=MS.gene057165.t1
chr8.1 exon 20664074 20664256 20664074 ID=MS.gene057165.t1.exon6;Parent=MS.gene057165.t1
chr8.1 CDS 20664074 20664256 20664074 ID=cds.MS.gene057165.t1;Parent=MS.gene057165.t1
chr8.1 exon 20664535 20664609 20664535 ID=MS.gene057165.t1.exon7;Parent=MS.gene057165.t1
chr8.1 CDS 20664535 20664609 20664535 ID=cds.MS.gene057165.t1;Parent=MS.gene057165.t1
chr8.1 exon 20664706 20664891 20664706 ID=MS.gene057165.t1.exon8;Parent=MS.gene057165.t1
chr8.1 CDS 20664706 20664891 20664706 ID=cds.MS.gene057165.t1;Parent=MS.gene057165.t1
chr8.1 exon 20665717 20665805 20665717 ID=MS.gene057165.t1.exon9;Parent=MS.gene057165.t1
chr8.1 CDS 20665717 20665805 20665717 ID=cds.MS.gene057165.t1;Parent=MS.gene057165.t1
chr8.1 exon 20666177 20666729 20666177 ID=MS.gene057165.t1.exon10;Parent=MS.gene057165.t1
chr8.1 CDS 20666177 20666729 20666177 ID=cds.MS.gene057165.t1;Parent=MS.gene057165.t1
Gene Sequence

>MS.gene057165

ATGGCTCAGTTGAAAGCATTTCCTTCACATCTATGCGCTACTACTACTCCTTCCCTTCATGCAACAGGTTCTCCTTCGTTTTCATTTCGCTCTCTTTCAAAAATGCTATTAACAATTTCAAAAACCCCATTTTTTGAATGTCATTAACAATTTATCATGACCCTTTATTGATTTTCATTACATTTCAACATCTCATTATGACATTATCTTCTTTGTTTTCTTGATTGTCATTTGCAGAGAATATTCTGTTTAATCGGGTTTGGAAGGCTAACCCATGTTCATTCAAAAAGGTGATATTTAAAAGTTCAAACTTTATTATTAGAGTTTACTAATATATGCTTTTATTTCATATTTTGTGACCCTTTTTTAATCTGTGTAGTTGAAACCAAGAGCTAGTGTCGGTGCTGGTAGACTTCAAGGTGAGATTATTTTGTCTCAAGATCCATTGAAAACTGTATGTGGATTGCATGATTTATAAACCATGGTGAATCTGTGGTTTTAAACTGCGGTTAGTTTCCGTTCTTTGTGAACCTTTGTATTGCAGCGATATTCGGTCAAAATTGTGGTTACGACACTGTTGCAGAGACCTCAACATCTTTTATATTGCGGTTGCGGACCGCAATTTGAAACCATATTCTTTAAGTTAAAACATAATTATTCAATAGCATGTGGTATTTCCTATTGTTCTTTGTAGTTGAATCTTTTAATTAAGATTTAAGACCTTATCAGGTATTAACGTGATGCGTCTCTCCAATTTTATTCTTTATATGTTGGAAATGAATGGACTCATCTGTTTTCACGAGTGTAATTTGCGTCGATGTTGAAAGTGGATAAATTCAGTGGAGGAACTGTGTGTTCACCAGTTGATTATATTGATTAGATGCCGTTTGATAGTTAAGTCTAATGTTTGTAATGCTATAGAAGTTTTCATGACATGCAGTTGTAAAGGCAGTATCACGCAGTCATACGGATGGTGAAGATTCCGAAGCCAAGAAGGGTAGCGGGCTACGTGGAAAATTGAATAAGGTTGTACTTGCTTACAGTGGTGGCTTAGACACATCAGTCATTGTCCCATGGTTGAGGTATATATGTTGCCTTGTTCTTTTTTATTTTTCTACTAGATTTCCATCACAAGTTCACAATCCTCTCCTTTGTATATTCTGAATAAAGAATGCTCAGTAATTTGAGGGGTAACCTTGGCGCAACTGGTAAAGTTGTTGTCATGTGACCGTAAGGTCATGGGTTCAAGTCCTGGAAACAGCCTCTTGTGTAAAAACAGGGTAAGGCTGCGTGCAATACACCAAATGGTGGGACCCCTTCCCGGACCCTGCATATGCGGGAGCTTCAGTGCACCGGGTTGCCCTTTTTTTTAAAGAATGCTCAGTAATTTAGATTTTAGAGATGTAGTTTAATCGAGTGGAATGGGTAAATAAAGATTAGAAACCATTTTGAAGTTACCTATTGTTGTATAATTTGTTCTTGTTATATTATCTTATTTAATGATTTTGGTGCTGCAGAGAGAATTATGGTTGTGATGTTGTGTGCTTCACTGCTGATGTTGGCCAAGTATGTCGTTACTTTTCAAATTTATTTCGTCTAATCATGATTATGCTGTCTAAATTGGTTATTGGAAGAGGCGTTATAAGATTGTAAATATCCGGCCAGGAGAATTTGTTTTACTCAGTTTATTGTTGATGTGCTACATGTCCGGTAACAAAATCAATTTCGTATAGGGTATAAAAGAATTGGACGGTTTGGAAGCCAAAGCAAAAGCCAGTGGAGCCTCCCAATTAGTCGTAAAGGACTTGAAGGAGGAATTTGTTAAAGATTACGTATTTCCTTGCTTGCGTGCTGGTGCCATTTATGAGAGGAAGTACTTGCTTGGGACCTCAATGGCCCGTCCTGTAATTGCAAAGGTACTTCGGCTTGAAGTTTGATATTTACCCCCAACACTTCAGATTAAAGGCGTGTCCAGTGTCCAACACCGTGTCAGTGTTTTACACTGACACGATACTGACACATGTATTTATATTCAATTTCTTCCATTCTTCAAATAATAATCGGTTGACATGTCCGTGTTATGTCCGGTGTCCGTGCCATTTCTTCATAGTAATTGTAATTGACGATGATAGTGGAACATACTTATCCACCGTATCTGTGGTTGTTGTACTGATTGATCCGTGCTGACTGGTAGGCCATGGTGGATGTTGCTAAAGAAGTTGGAGCTGATGCTGTCTCCCATGGGTGTACAGGGAAAGGAAATGATCAGGCATGTCTTCAGTCTTCTTACTATTATAGTTATAGTACTTTGTCATGTCAATTATATTATTCTGACTGATTTATTTATTTTTTTATAAACATTTAGGTTCGATTTGAGCTTACTTTCTTTGCGCTGAACCCCAAGCTAAACATTGTGGCTCCATGGAGGGAGTGGGATATTACAGGGAGAGAAGATGCCATTGAGTATGCTAAAAAGCACAACGTTCCCGTTCCGGTGACAAAAAAATCCATCTATAGCAGGGATAGGAACCTATGGCATCTTAGCCATGAGGTATGCTTTGTGGTTATCCTCAATCTAGCTCTAGTTGTAGTGTTGAATATTGGCTGAGTTTAATGATTTGTTTGTTTTTTCATTGGGTCTTGTCTGCTATTGAATTTAAGGTCAGATGATCCTTTCAAAGTAATAGAGTTGGTCCTTTAAAGAATGGTCTATAAAAACACATATTCATAATATATCAAAGCAAGATACACAAATTTCTAATAGATCTATAGATTCTGGGAAATGTAAAAAATCACATGATTATCCACACAAATGTCTTTACTTTAGTCTAAGATTCCAGTCATCAATTTAGTTCCTTATTAATGTTGTCCTTTAATTATCTTTTGTTGGAAGGCCGTCTAAAGGATGCTAATATACATGTGTCTGCATGTTTGGAAGCACATATGGGTTTGACCTACGCACCACATTAATGTTTGTTAGATGGCCTTCATTCATTCTGTAACAGATAGACAAAATGATATGGGGTCACTAAACTGGTGACAACAAAACTCTTAAGATCTCATGTGTGATGACACTTGAATCTTTGAAGGAAAAAAATTATGGTTCACTGTAATTTGTTTCTAAATGTGTGTAACATAACATATTTTTAGAACTATTTAAAGAAATCCTATCATTTGTTACCGGTCTCAAGAGATCATATGAATCTTCAAAGGGAATGCACTGCATCATTTCTATGCTATATCGTTCGAAATTGCTTATCTTTAGTTTGATCTAGGATTATGCTTTATGAAATTGTTTATCTATTGTCTGAAATTGTTTATCTTTGGGAGCGAGATGCTACTGTTTCTCTGATATATGCAATCTGTGTCACTAAAGGGTGATATTTTGGAAGACCCGGCTAATGAACCCAAGAAGGATATGTACATGATGTCTGTAGACCCGGAGGATGCTCCAGATCAAGCAGAGTAAGCTTCCTTCTCATGGTTCTATTAACTAATGATCTGTTTGGATTGGCTTGTTTGAGTTTATTTACTGGCATAAACACCTGTGAGACTCTTTGGGAGAACTTATGTAAACATCCTATGATATGTCCATAAGATGCTTTTAGCTTACTTCCATAAGCTCTCAAGGATAGCTTATGAAAACAACTTATAGCTTATATAAAAACAGTTTGATAAACACTTATGCTATAAGTATTAAATTAAGTTGTTTATCCAAACAGGGCCCAACTATATATACAGCTTCAAGTTTCTGTTATGCTTTTAAAAAGGGTGCTTACTATTGTTTTTGGAAGTTGTACCTTACATTTTTTGAAAGCACACATGATTTCTTGCAGATATTTGGAAATTGGTATTGAGTCTGGACTTCCCGTTTCACTCAATGGCAAGACGCTCTCACCAGCAACTTTACTCGCTGAGCTCAATGAGATAGGTGGAAAGCACGGAATTGGCCGGATCGACATGGTTGAGAATAGGCTTGTAGGCATGAAGAGCCGCGGAGTTTATGAAACTCCTGGTGGGACTATCCTTTTTAAAGCAGCACGGGAGTTGGAGTCTTTGACACTTGATCGAGAAACAATACAGGTGAAAGATACATTAGCCCTTAAATATGCAGAGTTGGTGTATGCTGGTAGATGGTTTGATCCACTTCGTGAGTCGATGGACGCCTTTATGCAGAAGATTACTGCGACCACAACAGGTTCTGTTACTTTGAAATTGTACAAAGGTTCTGTTACTGTAGCAGGTATGAAGAGTCCTTTTAGCCTGTATAGGCAAGATATCTCATCATTTGAGGGTAGTGAGATATATGATCAAGCTGATGCTGCTGGTTTTATCCGGCTTTACGGTCTTCCAATGAAGGTCCGGGCAATGCTTGAACAGGGCCTTTAA

Protein sequence

>MS.gene057165.t1

MAQLKAFPSHLCATTTPSLHATENILFNRVWKANPCSFKKLKPRASVGAGRLQVVKAVSRSHTDGEDSEAKKGSGLRGKLNKVVLAYSGGLDTSVIVPWLRENYGCDVVCFTADVGQGIKELDGLEAKAKASGASQLVVKDLKEEFVKDYVFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPKLNIVAPWREWDITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPKKDMYMMSVDPEDAPDQAEYLEIGIESGLPVSLNGKTLSPATLLAELNEIGGKHGIGRIDMVENRLVGMKSRGVYETPGGTILFKAARELESLTLDRETIQVKDTLALKYAELVYAGRWFDPLRESMDAFMQKITATTTGSVTLKLYKGSVTVAGMKSPFSLYRQDISSFEGSEIYDQADAAGFIRLYGLPMKVRAMLEQGL