Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87959.t1 | XP_003618951.1 | 100 | 226 | 0 | 0 | 1 | 226 | 1 | 226 | 2.60E-130 | 474.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87959.t1 | Q9FK59 | 82.0 | 205 | 35 | 1 | 24 | 226 | 17 | 221 | 1.6e-99 | 363.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87959.t1 | G7KPL2 | 100.0 | 226 | 0 | 0 | 1 | 226 | 1 | 226 | 1.9e-130 | 474.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87959 | MS.gene53524 | PPI |
| MS.gene073893 | MS.gene87959 | PPI |
| MS.gene053448 | MS.gene87959 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87959.t1 | MTR_6g029230 | 100.000 | 226 | 0 | 0 | 1 | 226 | 1 | 226 | 1.99e-172 | 473 |
| MS.gene87959.t1 | MTR_2g018260 | 37.736 | 159 | 97 | 1 | 40 | 196 | 40 | 198 | 8.77e-37 | 129 |
| MS.gene87959.t1 | MTR_1g045130 | 35.211 | 142 | 91 | 1 | 48 | 188 | 31 | 172 | 1.40e-29 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87959.t1 | AT5G18110 | 81.951 | 205 | 35 | 1 | 24 | 226 | 17 | 221 | 1.80e-126 | 357 |
| MS.gene87959.t1 | AT4G18040 | 38.255 | 149 | 92 | 0 | 48 | 196 | 60 | 208 | 2.44e-34 | 123 |
| MS.gene87959.t1 | AT1G29550 | 34.899 | 149 | 97 | 0 | 48 | 196 | 65 | 213 | 4.79e-28 | 106 |
| MS.gene87959.t1 | AT1G29590 | 33.557 | 149 | 99 | 0 | 48 | 196 | 65 | 213 | 1.58e-27 | 105 |
| MS.gene87959.t1 | AT5G35620 | 30.601 | 183 | 118 | 4 | 37 | 214 | 15 | 193 | 1.53e-24 | 96.7 |
| MS.gene87959.t1 | AT5G35620 | 30.601 | 183 | 118 | 4 | 37 | 214 | 15 | 193 | 1.53e-24 | 96.7 |
| MS.gene87959.t1 | AT5G35620 | 31.613 | 155 | 99 | 3 | 37 | 186 | 15 | 167 | 2.46e-23 | 92.4 |
Find 47 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGGAATTCGTCCTTTA+TGG | 0.144383 | 6.1:-10866395 | MS.gene87959:CDS |
| GTTCACAGGTTGAAGGGTTT+TGG | 0.180345 | 6.1:-10866482 | MS.gene87959:intron |
| CTAACTGCAATGGTGGAAAA+TGG | 0.299336 | 6.1:-10866220 | MS.gene87959:CDS |
| TGCGAGACAATTCATCTTAC+AGG | 0.303636 | 6.1:-10864419 | MS.gene87959:CDS |
| GTGGGTGACCAATTGGATTA+TGG | 0.334671 | 6.1:-10864703 | MS.gene87959:CDS |
| TATGATTGGTTTCGAATTCC+AGG | 0.339307 | 6.1:+10866618 | None:intergenic |
| ATGGATTATACGATTCAAAA+AGG | 0.339986 | 6.1:-10866201 | MS.gene87959:CDS |
| AATCAGAGGAATCGACAATT+TGG | 0.345426 | 6.1:+10869747 | None:intergenic |
| TGCCTTGGTGGGTGACCAAT+TGG | 0.355029 | 6.1:-10864710 | MS.gene87959:CDS |
| ACCAGAGCAAATTTGTGTTT+TGG | 0.356886 | 6.1:-10866656 | MS.gene87959:intron |
| AGCTGGTCTTCACCCTCTTA+AGG | 0.366017 | 6.1:-10869678 | MS.gene87959:intron |
| TGATGTTATCCTCGTATGAT+TGG | 0.373956 | 6.1:+10866604 | None:intergenic |
| TTGTAATGAAGAACCTTAAG+AGG | 0.394796 | 6.1:+10869665 | None:intergenic |
| GCTTCCTCACGGCTATGTTA+TGG | 0.396161 | 6.1:-10864466 | MS.gene87959:CDS |
| AGAAGGAATTCGTCCTTTAT+GGG | 0.402768 | 6.1:-10866394 | MS.gene87959:CDS |
| AGATGCAAATCTGTTGGAAT+AGG | 0.415770 | 6.1:+10866423 | None:intergenic |
| TTGAAAAGATGCAAATCTGT+TGG | 0.417946 | 6.1:+10866417 | None:intergenic |
| AATGCAGGTGCTTGCCTTGG+TGG | 0.418746 | 6.1:-10864722 | MS.gene87959:intron |
| CATAGCCGTGAGGAAGCTTT+AGG | 0.427935 | 6.1:+10864472 | None:intergenic |
| TTCACGAGATTGTCGTTCTT+CGG | 0.440058 | 6.1:+10869706 | None:intergenic |
| TCGCAATGCCTCTGATCATC+AGG | 0.442213 | 6.1:-10864617 | MS.gene87959:intron |
| TGTTATCACCATAATCCAAT+TGG | 0.452588 | 6.1:+10864695 | None:intergenic |
| ACGAGGACATAGTGAGTGTC+TGG | 0.454336 | 6.1:-10864642 | MS.gene87959:CDS |
| TAAGTATCTACCTCCCATAA+AGG | 0.467917 | 6.1:+10866381 | None:intergenic |
| TGGTACACTCGTCGGGTACC+TGG | 0.476680 | 6.1:-10866636 | MS.gene87959:CDS |
| GATTATGGTGATAACATTTG+TGG | 0.503544 | 6.1:-10864688 | MS.gene87959:CDS |
| CCAAATGCAGGTGCTTGCCT+TGG | 0.504330 | 6.1:-10864725 | MS.gene87959:intron |
| GACTCTGCTAACTGCAATGG+TGG | 0.541849 | 6.1:-10866227 | MS.gene87959:CDS |
| TACAGGAACACTTGGTTGAG+AGG | 0.543267 | 6.1:-10864402 | MS.gene87959:CDS |
| ATGCAGGTGCTTGCCTTGGT+GGG | 0.546695 | 6.1:-10864721 | MS.gene87959:intron |
| ATTCATCTTACAGGAACACT+TGG | 0.548432 | 6.1:-10864410 | MS.gene87959:CDS |
| TTTGACGTTGTAAGAATCAG+AGG | 0.556549 | 6.1:+10869733 | None:intergenic |
| CAATCTCGTGAACTCAAAGC+TGG | 0.583315 | 6.1:-10869695 | MS.gene87959:CDS |
| GAAGATTGTTGAATTCAGTA+CGG | 0.584185 | 6.1:-10866580 | MS.gene87959:intron |
| TGTAATGAAGAACCTTAAGA+GGG | 0.586424 | 6.1:+10869666 | None:intergenic |
| GTTGGAATAGGCAAGGAAGA+AGG | 0.587877 | 6.1:+10866435 | None:intergenic |
| CAAATCTGTTGGAATAGGCA+AGG | 0.608164 | 6.1:+10866428 | None:intergenic |
| AGGAAGAAGGACGAGCAAGA+TGG | 0.610167 | 6.1:+10866448 | None:intergenic |
| AAGGACTCTGCTAACTGCAA+TGG | 0.616200 | 6.1:-10866230 | MS.gene87959:CDS |
| ATCCAATTGGTCACCCACCA+AGG | 0.621634 | 6.1:+10864708 | None:intergenic |
| AGGAATTCGTCCTTTATGGG+AGG | 0.639812 | 6.1:-10866391 | MS.gene87959:intron |
| GATGCCAACCTGATGATCAG+AGG | 0.659266 | 6.1:+10864609 | None:intergenic |
| CGTCACCTAAAGCTTCCTCA+CGG | 0.685945 | 6.1:-10864477 | MS.gene87959:CDS |
| TCTCGCAGAGAAGCATCATG+CGG | 0.719756 | 6.1:+10864435 | None:intergenic |
| AATTCGAAACCAATCATACG+AGG | 0.732933 | 6.1:-10866613 | MS.gene87959:CDS |
| TACTCCATAACATAGCCGTG+AGG | 0.757014 | 6.1:+10864462 | None:intergenic |
| ACTAAGCATTCGTTTCAACG+AGG | 0.762117 | 6.1:-10864659 | MS.gene87959:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAATTTTAAAAAA+AGG | + | chr6.1:10866144-10866163 | None:intergenic | 0.0% |
| !! | TTTATAATTTATGTTAGTTA+TGG | - | chr6.1:10869333-10869352 | MS.gene87959:intron | 10.0% |
| !!! | AAAATTATGACTTTATTTAT+AGG | - | chr6.1:10864819-10864838 | MS.gene87959:intron | 10.0% |
| !!! | CAAAATATTTTATTCAAAAT+TGG | - | chr6.1:10868169-10868188 | MS.gene87959:intron | 10.0% |
| !!! | TCAATTATTAATTTTTATTG+AGG | - | chr6.1:10864632-10864651 | MS.gene87959:CDS | 10.0% |
| !!! | TTATTAATTTGTTTTTTGTT+AGG | - | chr6.1:10864576-10864595 | MS.gene87959:intron | 10.0% |
| !! | AAGTCTTAAAATCATTAATT+TGG | - | chr6.1:10866417-10866436 | MS.gene87959:CDS | 15.0% |
| !! | AATTGTGACTTTATTATATA+TGG | - | chr6.1:10865007-10865026 | MS.gene87959:intron | 15.0% |
| !! | ATCATTCATAAAATAATCTA+TGG | + | chr6.1:10866989-10867008 | None:intergenic | 15.0% |
| !! | ATTGTGACTTTATTATATAT+GGG | - | chr6.1:10865008-10865027 | MS.gene87959:intron | 15.0% |
| !! | TTAAGATAAAAATGTAGTAT+AGG | - | chr6.1:10868621-10868640 | MS.gene87959:intron | 15.0% |
| !! | TTATTATATATGGGATTTAA+GGG | - | chr6.1:10865017-10865036 | MS.gene87959:intron | 15.0% |
| !! | TTTATTATATATGGGATTTA+AGG | - | chr6.1:10865016-10865035 | MS.gene87959:intron | 15.0% |
| !! | TTTATTTATAGGATTTAAGA+GGG | - | chr6.1:10864830-10864849 | MS.gene87959:intron | 15.0% |
| !!! | AAAAATGTTGACTTTATATA+TGG | - | chr6.1:10864660-10864679 | MS.gene87959:CDS | 15.0% |
| !!! | AAAATGTTGACTTTATATAT+GGG | - | chr6.1:10864661-10864680 | MS.gene87959:CDS | 15.0% |
| !!! | ATATTTTTATGACCTTTATT+TGG | - | chr6.1:10869261-10869280 | MS.gene87959:intron | 15.0% |
| !!! | ATTAATGATTTTAAGACTTA+TGG | + | chr6.1:10866416-10866435 | None:intergenic | 15.0% |
| !!! | TTAAAATATGTTTTTGTCTT+CGG | + | chr6.1:10868380-10868399 | None:intergenic | 15.0% |
| !!! | TTAATGATTTTAAGACTTAT+GGG | + | chr6.1:10866415-10866434 | None:intergenic | 15.0% |
| !!! | TTTTGAAGTTATTCTATTTT+TGG | - | chr6.1:10867305-10867324 | MS.gene87959:intron | 15.0% |
| !! | AAAAGGCTAAATTAATTCAA+TGG | - | chr6.1:10866357-10866376 | MS.gene87959:intron | 20.0% |
| !! | AGTGAAATTAAATTAGAACT+TGG | - | chr6.1:10865042-10865061 | MS.gene87959:intron | 20.0% |
| !! | AGTGAAGAAATTAAGATTTA+GGG | - | chr6.1:10867205-10867224 | MS.gene87959:intron | 20.0% |
| !! | ATCATAAATGAAGTAATTCA+GGG | + | chr6.1:10868438-10868457 | None:intergenic | 20.0% |
| !! | ATGGAAATTAAGATATTGTT+TGG | + | chr6.1:10868781-10868800 | None:intergenic | 20.0% |
| !! | ATGTCAATGAGTTAATATTA+AGG | + | chr6.1:10865611-10865630 | None:intergenic | 20.0% |
| !! | CAAATAGATTCTTAAAAGTT+GGG | - | chr6.1:10864929-10864948 | MS.gene87959:intron | 20.0% |
| !! | CAATATAATAATCCAATCTA+TGG | + | chr6.1:10865524-10865543 | None:intergenic | 20.0% |
| !! | CTTAATGTTTGAATAGTATT+GGG | - | chr6.1:10867408-10867427 | MS.gene87959:intron | 20.0% |
| !! | TAGTGAAGAAATTAAGATTT+AGG | - | chr6.1:10867204-10867223 | MS.gene87959:intron | 20.0% |
| !! | TATTATATATGGGATTTAAG+GGG | - | chr6.1:10865018-10865037 | MS.gene87959:intron | 20.0% |
| !! | TCTTAATGTTTGAATAGTAT+TGG | - | chr6.1:10867407-10867426 | MS.gene87959:intron | 20.0% |
| !! | TGGAAATTAAGATATTGTTT+GGG | + | chr6.1:10868780-10868799 | None:intergenic | 20.0% |
| !! | TTTATATATGGGATTTATGT+GGG | - | chr6.1:10864672-10864691 | MS.gene87959:CDS | 20.0% |
| !! | TTTGAACTTAAACATGTTAT+AGG | - | chr6.1:10864861-10864880 | MS.gene87959:intron | 20.0% |
| !! | TTTGGAAGTTAACATAAAAA+AGG | - | chr6.1:10869211-10869230 | MS.gene87959:intron | 20.0% |
| !!! | AAATGTAATTTTAATCCACA+GGG | + | chr6.1:10869416-10869435 | None:intergenic | 20.0% |
| !!! | CTTTATTTATAGGATTTAAG+AGG | - | chr6.1:10864829-10864848 | MS.gene87959:intron | 20.0% |
| !!! | TTCAACAAAAAAGAAGATTT+TGG | - | chr6.1:10865468-10865487 | MS.gene87959:intron | 20.0% |
| !!! | TTTAGCCTTTTGATTATTTA+CGG | + | chr6.1:10866348-10866367 | None:intergenic | 20.0% |
| ! | AAAAACAGCCCTAAATATTA+AGG | + | chr6.1:10866005-10866024 | None:intergenic | 25.0% |
| ! | AAAAACCAGAAATGTTATGA+AGG | + | chr6.1:10869673-10869692 | None:intergenic | 25.0% |
| ! | AAAGCAAATTAACCAACATT+TGG | + | chr6.1:10867935-10867954 | None:intergenic | 25.0% |
| ! | AAAGTCTGCCTTAATATTTA+GGG | - | chr6.1:10865994-10866013 | MS.gene87959:intron | 25.0% |
| ! | AACAAAAAGGAACAAAAATC+TGG | - | chr6.1:10866302-10866321 | MS.gene87959:intron | 25.0% |
| ! | AACTACAAAATGGATCTAAA+TGG | + | chr6.1:10865245-10865264 | None:intergenic | 25.0% |
| ! | AACTTAAAAACAGAGCAAAA+AGG | + | chr6.1:10869315-10869334 | None:intergenic | 25.0% |
| ! | AACTTCAAAAGTCAAATTGA+AGG | + | chr6.1:10867295-10867314 | None:intergenic | 25.0% |
| ! | ACCTGAAGCTAAATTATATT+TGG | - | chr6.1:10866522-10866541 | MS.gene87959:intron | 25.0% |
| ! | ATAAAAAAGGAAAACTGTCA+TGG | - | chr6.1:10869224-10869243 | MS.gene87959:intron | 25.0% |
| ! | ATTTATGAGTTGTTCTGTTA+TGG | - | chr6.1:10867887-10867906 | MS.gene87959:intron | 25.0% |
| ! | CAAAATTGTACATGGAAATT+AGG | - | chr6.1:10865297-10865316 | MS.gene87959:intron | 25.0% |
| ! | CATCATAAATGAAGTAATTC+AGG | + | chr6.1:10868439-10868458 | None:intergenic | 25.0% |
| ! | CTAGAATATATAAACTGGAA+TGG | + | chr6.1:10868407-10868426 | None:intergenic | 25.0% |
| ! | CTTTATATATGGGATTTATG+TGG | - | chr6.1:10864671-10864690 | MS.gene87959:CDS | 25.0% |
| ! | GAAAATAAAACAAAACTCCA+AGG | + | chr6.1:10866122-10866141 | None:intergenic | 25.0% |
| ! | GCAAATAGATTCTTAAAAGT+TGG | - | chr6.1:10864928-10864947 | MS.gene87959:intron | 25.0% |
| ! | GCCATATGAATATATAAATC+AGG | + | chr6.1:10868462-10868481 | None:intergenic | 25.0% |
| ! | GCCTGATTTATATATTCATA+TGG | - | chr6.1:10868458-10868477 | MS.gene87959:intron | 25.0% |
| ! | TACTAATTCGTATCATAGTT+TGG | + | chr6.1:10867139-10867158 | None:intergenic | 25.0% |
| ! | TATGATGCAAGGATATAAAA+AGG | - | chr6.1:10866603-10866622 | MS.gene87959:CDS | 25.0% |
| ! | TGAAGCTAAATTATATTTGG+TGG | - | chr6.1:10866525-10866544 | MS.gene87959:intron | 25.0% |
| ! | TGAATATTCTATCATTGACA+TGG | + | chr6.1:10868292-10868311 | None:intergenic | 25.0% |
| ! | TGGTTAAAGTAACTACAAAA+TGG | + | chr6.1:10865255-10865274 | None:intergenic | 25.0% |
| ! | TTATATCCTTGCATCATAAT+TGG | + | chr6.1:10866601-10866620 | None:intergenic | 25.0% |
| ! | TTGATTTAATCTGATGTGTT+GGG | - | chr6.1:10865377-10865396 | MS.gene87959:intron | 25.0% |
| !! | AAAGTCAAATTGAAGGATTT+TGG | + | chr6.1:10867288-10867307 | None:intergenic | 25.0% |
| !! | AAGTCAAATTGAAGGATTTT+GGG | + | chr6.1:10867287-10867306 | None:intergenic | 25.0% |
| !! | AATAGTCTAGTTTCTAAACT+GGG | + | chr6.1:10869021-10869040 | None:intergenic | 25.0% |
| !! | ACATTTCTGTTGTTTATTGT+TGG | - | chr6.1:10869430-10869449 | MS.gene87959:intron | 25.0% |
| !! | ACATTTTTCATAATCATTGC+AGG | + | chr6.1:10868108-10868127 | None:intergenic | 25.0% |
| !! | ACCAAATATAATTTAGCTTC+AGG | + | chr6.1:10866526-10866545 | None:intergenic | 25.0% |
| !! | ATGGATTATACGATTCAAAA+AGG | - | chr6.1:10868006-10868025 | MS.gene87959:intron | 25.0% |
| !! | TGGTTAGTGAAAATATTTTC+AGG | - | chr6.1:10868056-10868075 | MS.gene87959:intron | 25.0% |
| !! | TTGACCAAATTGAACTTTTT+GGG | - | chr6.1:10867093-10867112 | MS.gene87959:intron | 25.0% |
| !! | TTTGATTTAATCTGATGTGT+TGG | - | chr6.1:10865376-10865395 | MS.gene87959:intron | 25.0% |
| !! | TTTGGGAAAATGTTTTTCTA+TGG | + | chr6.1:10868763-10868782 | None:intergenic | 25.0% |
| !! | TTTTCAGTAACTTCATATAG+AGG | + | chr6.1:10868566-10868585 | None:intergenic | 25.0% |
| !!! | AATGATATGTTTGCTGTATT+GGG | - | chr6.1:10867342-10867361 | MS.gene87959:intron | 25.0% |
| !!! | AATGATCAAGTTGAAAGTTT+TGG | - | chr6.1:10865646-10865665 | MS.gene87959:intron | 25.0% |
| !!! | ACACTCTAGAATATATAAAC+TGG | + | chr6.1:10868412-10868431 | None:intergenic | 25.0% |
| !!! | ATGATCAAGTTGAAAGTTTT+GGG | - | chr6.1:10865647-10865666 | MS.gene87959:intron | 25.0% |
| !!! | GAAATGTAATTTTAATCCAC+AGG | + | chr6.1:10869417-10869436 | None:intergenic | 25.0% |
| !!! | TAGGAACATTTTTTATGTGT+GGG | - | chr6.1:10864955-10864974 | MS.gene87959:intron | 25.0% |
| !!! | TATTCTATTTTTGGACGAAT+TGG | - | chr6.1:10867314-10867333 | MS.gene87959:intron | 25.0% |
| !!! | TGACAATTTTTTTTGTTCAC+AGG | - | chr6.1:10867711-10867730 | MS.gene87959:intron | 25.0% |
| !!! | TTTTGGTTGATTTATTGTGT+TGG | - | chr6.1:10867517-10867536 | MS.gene87959:intron | 25.0% |
| AACAACTTCTAACTGCTTAT+TGG | - | chr6.1:10869138-10869157 | MS.gene87959:intron | 30.0% | |
| AACCATAGATCAGATTTAAC+AGG | - | chr6.1:10865270-10865289 | MS.gene87959:intron | 30.0% | |
| AAGAAATCAGCACAGTTTAT+TGG | - | chr6.1:10865578-10865597 | MS.gene87959:intron | 30.0% | |
| AAGGTAACAATCAACTTCAA+AGG | + | chr6.1:10866103-10866122 | None:intergenic | 30.0% | |
| AATCAACTTCAAAGGTCAAA+TGG | + | chr6.1:10866095-10866114 | None:intergenic | 30.0% | |
| AATTATTACCCCTGTTAATG+TGG | - | chr6.1:10865872-10865891 | MS.gene87959:intron | 30.0% | |
| ACCATAGATCAGATTTAACA+GGG | - | chr6.1:10865271-10865290 | MS.gene87959:intron | 30.0% | |
| ACTCTTCACAAATGACTAAA+CGG | + | chr6.1:10868956-10868975 | None:intergenic | 30.0% | |
| AGAGATTCCAAATGGTAATT+TGG | + | chr6.1:10869364-10869383 | None:intergenic | 30.0% | |
| ATATAACGCACACACATATA+GGG | + | chr6.1:10869632-10869651 | None:intergenic | 30.0% | |
| ATCCAGAATTTAGATACATG+TGG | - | chr6.1:10866202-10866221 | MS.gene87959:CDS | 30.0% | |
| ATCCTAAGCACTAATTCAAT+AGG | + | chr6.1:10868902-10868921 | None:intergenic | 30.0% | |
| ATTAACTCATTGACATGTTG+AGG | - | chr6.1:10865615-10865634 | MS.gene87959:intron | 30.0% | |
| ATTCTTAAAAGTTGGGAAGT+AGG | - | chr6.1:10864936-10864955 | MS.gene87959:intron | 30.0% | |
| CAAAAATGGTTTACATCATG+TGG | + | chr6.1:10868822-10868841 | None:intergenic | 30.0% | |
| CAAAGTCTGCCTTAATATTT+AGG | - | chr6.1:10865993-10866012 | MS.gene87959:intron | 30.0% | |
| CTAAATATTAAGGCAGACTT+TGG | + | chr6.1:10865995-10866014 | None:intergenic | 30.0% | |
| CTATGAAACTTAATGTGTTG+GGG | - | chr6.1:10865131-10865150 | MS.gene87959:intron | 30.0% | |
| GAAAACTGGAAATTAGTTGA+GGG | + | chr6.1:10866384-10866403 | None:intergenic | 30.0% | |
| GAAAGATCAGTACAGTTTAT+TGG | - | chr6.1:10865723-10865742 | MS.gene87959:intron | 30.0% | |
| GAACACCGTAAATAATCAAA+AGG | - | chr6.1:10866340-10866359 | MS.gene87959:intron | 30.0% | |
| GAAGATTGTTGAATTCAGTA+CGG | - | chr6.1:10867627-10867646 | MS.gene87959:intron | 30.0% | |
| GATTATGGTGATAACATTTG+TGG | - | chr6.1:10869519-10869538 | MS.gene87959:intron | 30.0% | |
| GCTATGAAACTTAATGTGTT+GGG | - | chr6.1:10865130-10865149 | MS.gene87959:intron | 30.0% | |
| GTGAAGAGGAAATATTTGTA+TGG | + | chr6.1:10868800-10868819 | None:intergenic | 30.0% | |
| TAAAACAAAAGCTTAACAGC+TGG | - | chr6.1:10866639-10866658 | MS.gene87959:CDS | 30.0% | |
| TAGTTTCTTTCACCATAGAT+TGG | - | chr6.1:10865509-10865528 | MS.gene87959:intron | 30.0% | |
| TATATAACGCACACACATAT+AGG | + | chr6.1:10869633-10869652 | None:intergenic | 30.0% | |
| TATGGGACTAAAATGAAAAC+TGG | + | chr6.1:10866398-10866417 | None:intergenic | 30.0% | |
| TATGTTAACTTCCAAAGAAC+CGG | + | chr6.1:10869207-10869226 | None:intergenic | 30.0% | |
| TATTATTACATGCCAAATGC+AGG | - | chr6.1:10869470-10869489 | MS.gene87959:intron | 30.0% | |
| TGAAAACTGGAAATTAGTTG+AGG | + | chr6.1:10866385-10866404 | None:intergenic | 30.0% | |
| TGATTTAATCTGATGTGTTG+GGG | - | chr6.1:10865378-10865397 | MS.gene87959:intron | 30.0% | |
| TGCTATGAAACTTAATGTGT+TGG | - | chr6.1:10865129-10865148 | MS.gene87959:intron | 30.0% | |
| TGCTTAGGATTTCTATGTAT+AGG | - | chr6.1:10868912-10868931 | MS.gene87959:intron | 30.0% | |
| TGGCTTATGTTTCAATTTCA+TGG | - | chr6.1:10867856-10867875 | MS.gene87959:intron | 30.0% | |
| TGGTGAAAGAAACTACAAAA+TGG | + | chr6.1:10865504-10865523 | None:intergenic | 30.0% | |
| TGTAATGAAGAACCTTAAGA+GGG | + | chr6.1:10864544-10864563 | None:intergenic | 30.0% | |
| TGTATCTCTTTACACACAAA+GGG | + | chr6.1:10867015-10867034 | None:intergenic | 30.0% | |
| TGTCTGTATCTATGCTTAAT+AGG | - | chr6.1:10865895-10865914 | MS.gene87959:intron | 30.0% | |
| TGTTATCACCATAATCCAAT+TGG | + | chr6.1:10869515-10869534 | None:intergenic | 30.0% | |
| TTAAGATCAACAAAATCACG+TGG | + | chr6.1:10869290-10869309 | None:intergenic | 30.0% | |
| TTGAAAAGATGCAAATCTGT+TGG | + | chr6.1:10867793-10867812 | None:intergenic | 30.0% | |
| TTGCGATTTAATGACCAAAT+TGG | - | chr6.1:10865939-10865958 | MS.gene87959:intron | 30.0% | |
| TTGTAATGAAGAACCTTAAG+AGG | + | chr6.1:10864545-10864564 | None:intergenic | 30.0% | |
| TTTGTCTTCGGTTTCAATTA+TGG | + | chr6.1:10868368-10868387 | None:intergenic | 30.0% | |
| ! | AAGGTCAAATGGAAAGATTT+TGG | + | chr6.1:10866084-10866103 | None:intergenic | 30.0% |
| ! | AATGACCAAATTGGATGTTT+TGG | - | chr6.1:10865948-10865967 | MS.gene87959:intron | 30.0% |
| ! | AATGTTTGAATAGTATTGGG+AGG | - | chr6.1:10867411-10867430 | MS.gene87959:intron | 30.0% |
| ! | AGGTCAAATGGAAAGATTTT+GGG | + | chr6.1:10866083-10866102 | None:intergenic | 30.0% |
| ! | ATGACCAAATTGGATGTTTT+GGG | - | chr6.1:10865949-10865968 | MS.gene87959:intron | 30.0% |
| ! | GAATAGTCTAGTTTCTAAAC+TGG | + | chr6.1:10869022-10869041 | None:intergenic | 30.0% |
| ! | GATTTAGATCCACATTTTAG+CGG | - | chr6.1:10866957-10866976 | MS.gene87959:intron | 30.0% |
| ! | GATTTGCATCTTTTCAAAGA+AGG | - | chr6.1:10867796-10867815 | MS.gene87959:intron | 30.0% |
| ! | GGGGTAATAATTTGAGATAA+TGG | + | chr6.1:10865864-10865883 | None:intergenic | 30.0% |
| ! | GTTGACCAAATTGAACTTTT+TGG | - | chr6.1:10867092-10867111 | MS.gene87959:intron | 30.0% |
| ! | GTTGATTGTTGAAGGTTTTT+GGG | - | chr6.1:10868701-10868720 | MS.gene87959:intron | 30.0% |
| ! | TAGTTTTTACATTTCCTGTG+TGG | - | chr6.1:10869175-10869194 | MS.gene87959:intron | 30.0% |
| ! | TTGATTGTTGAAGGTTTTTG+GGG | - | chr6.1:10868702-10868721 | MS.gene87959:intron | 30.0% |
| ! | TTTGAAGTTGATTGTTACCT+TGG | - | chr6.1:10866102-10866121 | MS.gene87959:intron | 30.0% |
| ! | TTTTGCTCCGTTATTCAATT+TGG | - | chr6.1:10866449-10866468 | MS.gene87959:CDS | 30.0% |
| !! | ACTCGCAATTTTGACAAAAA+TGG | + | chr6.1:10868836-10868855 | None:intergenic | 30.0% |
| !! | CTCAGTGAATTTTGACATTT+TGG | - | chr6.1:10867500-10867519 | MS.gene87959:intron | 30.0% |
| !! | GAATGATATGTTTGCTGTAT+TGG | - | chr6.1:10867341-10867360 | MS.gene87959:intron | 30.0% |
| !! | TGTTGATTGTTGAAGGTTTT+TGG | - | chr6.1:10868700-10868719 | MS.gene87959:intron | 30.0% |
| !!! | AGGAACATTTTTTATGTGTG+GGG | - | chr6.1:10864956-10864975 | MS.gene87959:intron | 30.0% |
| !!! | ATGCATGGTTTTAGTTTCTA+AGG | + | chr6.1:10866667-10866686 | None:intergenic | 30.0% |
| !!! | ATTTAGGGTTGTTTTTGTTG+AGG | - | chr6.1:10867220-10867239 | MS.gene87959:intron | 30.0% |
| !!! | GTAGGAACATTTTTTATGTG+TGG | - | chr6.1:10864954-10864973 | MS.gene87959:intron | 30.0% |
| !!! | TGCATGGTTTTAGTTTCTAA+GGG | + | chr6.1:10866666-10866685 | None:intergenic | 30.0% |
| !!! | TTTTTTGTTCACAGGTTGAA+GGG | - | chr6.1:10867719-10867738 | MS.gene87959:intron | 30.0% |
| !!! | TTTTTTTGTTCACAGGTTGA+AGG | - | chr6.1:10867718-10867737 | MS.gene87959:intron | 30.0% |
| AAAAATCTGGTGCCCTATAT+AGG | - | chr6.1:10866315-10866334 | MS.gene87959:intron | 35.0% | |
| AACATATGAGATTTGAGTGC+AGG | - | chr6.1:10866174-10866193 | MS.gene87959:CDS | 35.0% | |
| AAGAAGGAATTCGTCCTTTA+TGG | - | chr6.1:10867812-10867831 | MS.gene87959:intron | 35.0% | |
| AATCAGAGGAATCGACAATT+TGG | + | chr6.1:10864463-10864482 | None:intergenic | 35.0% | |
| AATTCGAAACCAATCATACG+AGG | - | chr6.1:10867594-10867613 | MS.gene87959:intron | 35.0% | |
| ACAACCCAAAACATCCAATT+TGG | + | chr6.1:10865956-10865975 | None:intergenic | 35.0% | |
| ACACCTTAATTGTGGATAAG+TGG | + | chr6.1:10865427-10865446 | None:intergenic | 35.0% | |
| ACAGTACCAAACCATCATTA+TGG | - | chr6.1:10866832-10866851 | MS.gene87959:intron | 35.0% | |
| ACATATGAGATTTGAGTGCA+GGG | - | chr6.1:10866175-10866194 | MS.gene87959:CDS | 35.0% | |
| ACCAACTATGCTGTACTTAA+GGG | + | chr6.1:10865343-10865362 | None:intergenic | 35.0% | |
| ACCCTGTTAAATCTGATCTA+TGG | + | chr6.1:10865275-10865294 | None:intergenic | 35.0% | |
| ACCTTACATGTGAATAAGTC+AGG | + | chr6.1:10865178-10865197 | None:intergenic | 35.0% | |
| ACTAATTCAATAGGCAGAAG+GGG | + | chr6.1:10868893-10868912 | None:intergenic | 35.0% | |
| AGAAGGAATTCGTCCTTTAT+GGG | - | chr6.1:10867813-10867832 | MS.gene87959:intron | 35.0% | |
| AGAATCACACACCTTAATTG+TGG | + | chr6.1:10865435-10865454 | None:intergenic | 35.0% | |
| AGACAAACATTTCAGACCTA+TGG | + | chr6.1:10868333-10868352 | None:intergenic | 35.0% | |
| AGAGATACAGCAAAGTTTAG+TGG | - | chr6.1:10867026-10867045 | MS.gene87959:intron | 35.0% | |
| AGATGCAAATCTGTTGGAAT+AGG | + | chr6.1:10867787-10867806 | None:intergenic | 35.0% | |
| AGATGTTTGATGTATCGTGT+TGG | - | chr6.1:10867652-10867671 | MS.gene87959:intron | 35.0% | |
| AGGTAGATACTTAATGGCTT+TGG | - | chr6.1:10867836-10867855 | MS.gene87959:intron | 35.0% | |
| AGTACCAAACCATCATTATG+GGG | - | chr6.1:10866834-10866853 | MS.gene87959:intron | 35.0% | |
| ATACAGACACCACATTAACA+GGG | + | chr6.1:10865884-10865903 | None:intergenic | 35.0% | |
| ATCACGTGGAAACCAAATAA+AGG | + | chr6.1:10869276-10869295 | None:intergenic | 35.0% | |
| ATCCTTGCATCATAATTGGT+TGG | + | chr6.1:10866597-10866616 | None:intergenic | 35.0% | |
| ATTCATCTTACAGGAACACT+TGG | - | chr6.1:10869797-10869816 | MS.gene87959:CDS | 35.0% | |
| ATTCATTTACCCACTCAAAC+AGG | + | chr6.1:10866908-10866927 | None:intergenic | 35.0% | |
| ATTTCCTGTGTGGATAATAC+CGG | - | chr6.1:10869185-10869204 | MS.gene87959:intron | 35.0% | |
| ATTTGAACCTGTTGATGTGA+TGG | - | chr6.1:10864703-10864722 | MS.gene87959:CDS | 35.0% | |
| CACTAATTCAATAGGCAGAA+GGG | + | chr6.1:10868894-10868913 | None:intergenic | 35.0% | |
| CAGGGTAACAAAATTGTACA+TGG | - | chr6.1:10865289-10865308 | MS.gene87959:intron | 35.0% | |
| CAGTAACTTCATATAGAGGA+GGG | + | chr6.1:10868562-10868581 | None:intergenic | 35.0% | |
| CAGTACCAAACCATCATTAT+GGG | - | chr6.1:10866833-10866852 | MS.gene87959:intron | 35.0% | |
| CTCCACATGTATCTAAATTC+TGG | + | chr6.1:10866207-10866226 | None:intergenic | 35.0% | |
| CTGTATCTCTTTACACACAA+AGG | + | chr6.1:10867016-10867035 | None:intergenic | 35.0% | |
| CTGTTGCTACACTAATATGT+GGG | + | chr6.1:10866805-10866824 | None:intergenic | 35.0% | |
| GACTATTCTACTCGATGTAT+AGG | - | chr6.1:10869034-10869053 | MS.gene87959:intron | 35.0% | |
| GAGATACAGCAAAGTTTAGT+GGG | - | chr6.1:10867027-10867046 | MS.gene87959:intron | 35.0% | |
| GAGCACATATCACACAAAAA+TGG | + | chr6.1:10865693-10865712 | None:intergenic | 35.0% | |
| GATTATGTAACTGCATGAGT+CGG | + | chr6.1:10865837-10865856 | None:intergenic | 35.0% | |
| GCAACCCAAAAAGTTCAATT+TGG | + | chr6.1:10867100-10867119 | None:intergenic | 35.0% | |
| GTACTTGCAGAACAAATCTT+CGG | + | chr6.1:10865087-10865106 | None:intergenic | 35.0% | |
| GTAGAAGTTTGTCCAAATGT+TGG | - | chr6.1:10867920-10867939 | MS.gene87959:intron | 35.0% | |
| GTTTATCAGCAGACAAAACA+AGG | + | chr6.1:10868084-10868103 | None:intergenic | 35.0% | |
| TAAGTATCTACCTCCCATAA+AGG | + | chr6.1:10867829-10867848 | None:intergenic | 35.0% | |
| TACCAACTATGCTGTACTTA+AGG | + | chr6.1:10865344-10865363 | None:intergenic | 35.0% | |
| TATGGGAGGTAGATACTTAA+TGG | - | chr6.1:10867830-10867849 | MS.gene87959:intron | 35.0% | |
| TCAGTAACTTCATATAGAGG+AGG | + | chr6.1:10868563-10868582 | None:intergenic | 35.0% | |
| TCCTGACTTATTCACATGTA+AGG | - | chr6.1:10865174-10865193 | MS.gene87959:intron | 35.0% | |
| TCCTTGCATCATAATTGGTT+GGG | + | chr6.1:10866596-10866615 | None:intergenic | 35.0% | |
| TCTCCACTTATCCACAATTA+AGG | - | chr6.1:10865421-10865440 | MS.gene87959:intron | 35.0% | |
| TGATGTATCGTGTTGGATTT+AGG | - | chr6.1:10867659-10867678 | MS.gene87959:intron | 35.0% | |
| TGATGTTATCCTCGTATGAT+TGG | + | chr6.1:10867606-10867625 | None:intergenic | 35.0% | |
| TGCCTATTGAATTAGTGCTT+AGG | - | chr6.1:10868897-10868916 | MS.gene87959:intron | 35.0% | |
| TGTATGACATGTGTTAGACT+TGG | - | chr6.1:10865802-10865821 | MS.gene87959:intron | 35.0% | |
| TTAGCAGAGTCCTTCAAAAA+AGG | + | chr6.1:10867971-10867990 | None:intergenic | 35.0% | |
| TTCACTGCATAATATGCACT+AGG | - | chr6.1:10868975-10868994 | MS.gene87959:intron | 35.0% | |
| TTCATTTACCCACTCAAACA+GGG | + | chr6.1:10866907-10866926 | None:intergenic | 35.0% | |
| TTTGAACCTGTTGATGTGAT+GGG | - | chr6.1:10864704-10864723 | MS.gene87959:CDS | 35.0% | |
| TTTGACGTTGTAAGAATCAG+AGG | + | chr6.1:10864477-10864496 | None:intergenic | 35.0% | |
| ! | AATAACGGAGCAAAAGTTGA+GGG | + | chr6.1:10866444-10866463 | None:intergenic | 35.0% |
| ! | AATTTAGCTTCAGGTCTAGT+TGG | + | chr6.1:10866517-10866536 | None:intergenic | 35.0% |
| ! | ACACTGTTCTAAACAAAGAG+AGG | + | chr6.1:10869096-10869115 | None:intergenic | 35.0% |
| ! | ACCAAAACACAAATTTGCTC+TGG | + | chr6.1:10867555-10867574 | None:intergenic | 35.0% |
| ! | ACCAGAGCAAATTTGTGTTT+TGG | - | chr6.1:10867551-10867570 | MS.gene87959:intron | 35.0% |
| ! | AGGGACATTTTTGATGTGTT+GGG | - | chr6.1:10864768-10864787 | MS.gene87959:intron | 35.0% |
| ! | AGTTGAACAGTTCAAGTTTG+GGG | - | chr6.1:10868518-10868537 | MS.gene87959:intron | 35.0% |
| ! | ATGCATGGTTAAGCTTTTGT+GGG | + | chr6.1:10866691-10866710 | None:intergenic | 35.0% |
| ! | ATTTAGCTTCAGGTCTAGTT+GGG | + | chr6.1:10866516-10866535 | None:intergenic | 35.0% |
| ! | CACTGTTCTAAACAAAGAGA+GGG | + | chr6.1:10869095-10869114 | None:intergenic | 35.0% |
| ! | CAGTTGAACAGTTCAAGTTT+GGG | - | chr6.1:10868517-10868536 | MS.gene87959:intron | 35.0% |
| ! | TAGGGACATTTTTGATGTGT+TGG | - | chr6.1:10864767-10864786 | MS.gene87959:intron | 35.0% |
| ! | TATTTGAAATCCTCGTCCAT+AGG | - | chr6.1:10868314-10868333 | MS.gene87959:intron | 35.0% |
| ! | TCAAATTGAAGGATTTTGGG+AGG | + | chr6.1:10867284-10867303 | None:intergenic | 35.0% |
| ! | TCAGTTGAACAGTTCAAGTT+TGG | - | chr6.1:10868516-10868535 | MS.gene87959:intron | 35.0% |
| ! | TCTAGTTTCTAAACTGGGAA+AGG | + | chr6.1:10869016-10869035 | None:intergenic | 35.0% |
| ! | TTTTCCCCATAATGATGGTT+TGG | + | chr6.1:10866841-10866860 | None:intergenic | 35.0% |
| !! | ATGAATCAGTTGGTAACTGT+AGG | - | chr6.1:10864748-10864767 | MS.gene87959:intron | 35.0% |
| !! | GACAATTTGGTGAGTGTTTT+CGG | + | chr6.1:10864450-10864469 | None:intergenic | 35.0% |
| !! | TATGATTGGTTTCGAATTCC+AGG | + | chr6.1:10867592-10867611 | None:intergenic | 35.0% |
| !! | TGAATCAGTTGGTAACTGTA+GGG | - | chr6.1:10864749-10864768 | MS.gene87959:intron | 35.0% |
| !!! | AAATTGGATGTTTTGGGTTG+TGG | - | chr6.1:10865955-10865974 | MS.gene87959:intron | 35.0% |
| !!! | AATTGGATGTTTTGGGTTGT+GGG | - | chr6.1:10865956-10865975 | MS.gene87959:intron | 35.0% |
| !!! | ATTTTTTATGTGTGGGGACT+TGG | - | chr6.1:10864962-10864981 | MS.gene87959:intron | 35.0% |
| !!! | GCTGTTTTTGACTTTTGTTG+AGG | - | chr6.1:10866016-10866035 | MS.gene87959:intron | 35.0% |
| !!! | TTTTTTATGTGTGGGGACTT+GGG | - | chr6.1:10864963-10864982 | MS.gene87959:intron | 35.0% |
| AAACTTAATGTGTTGGGGTC+TGG | - | chr6.1:10865136-10865155 | MS.gene87959:intron | 40.0% | |
| AACTTAATGTGTTGGGGTCT+GGG | - | chr6.1:10865137-10865156 | MS.gene87959:intron | 40.0% | |
| AATGTTATGAAGGACAGGCA+TGG | + | chr6.1:10869663-10869682 | None:intergenic | 40.0% | |
| ACCCAACCAATTATGATGCA+AGG | - | chr6.1:10866592-10866611 | MS.gene87959:CDS | 40.0% | |
| ACGAGTTGTCATGAATCAGT+TGG | - | chr6.1:10864738-10864757 | MS.gene87959:intron | 40.0% | |
| ACTAAGCATTCGTTTCAACG+AGG | - | chr6.1:10869548-10869567 | MS.gene87959:intron | 40.0% | |
| AGCAGCAACCAAAAAAGCTT+TGG | - | chr6.1:10866557-10866576 | MS.gene87959:intron | 40.0% | |
| AGCTTCCTAAATTCAAACCC+AGG | + | chr6.1:10864797-10864816 | None:intergenic | 40.0% | |
| ATCAGCTCTGCTAAAAAACC+AGG | - | chr6.1:10866775-10866794 | MS.gene87959:intron | 40.0% | |
| CAAATCTGTTGGAATAGGCA+AGG | + | chr6.1:10867782-10867801 | None:intergenic | 40.0% | |
| CAAGACTCATCCTACTAGAT+GGG | + | chr6.1:10868238-10868257 | None:intergenic | 40.0% | |
| CAAGCAAGAGAGATTCCAAA+TGG | + | chr6.1:10869372-10869391 | None:intergenic | 40.0% | |
| CACTCGCGGATAAAACAAAA+AGG | - | chr6.1:10866289-10866308 | MS.gene87959:intron | 40.0% | |
| CATATGAGATTTGAGTGCAG+GGG | - | chr6.1:10866176-10866195 | MS.gene87959:CDS | 40.0% | |
| CATGTGAATCCGATGTCAAT+TGG | - | chr6.1:10868657-10868676 | MS.gene87959:intron | 40.0% | |
| CCAGAAATGTTATGAAGGAC+AGG | + | chr6.1:10869668-10869687 | None:intergenic | 40.0% | |
| CCTGTCCTTCATAACATTTC+TGG | - | chr6.1:10869665-10869684 | MS.gene87959:intron | 40.0% | |
| CTAGCTGTTCCAATTGACAT+CGG | + | chr6.1:10868669-10868688 | None:intergenic | 40.0% | |
| GATACAGACACCACATTAAC+AGG | + | chr6.1:10865885-10865904 | None:intergenic | 40.0% | |
| GCACTAATTCAATAGGCAGA+AGG | + | chr6.1:10868895-10868914 | None:intergenic | 40.0% | |
| GCTGTTGCTACACTAATATG+TGG | + | chr6.1:10866806-10866825 | None:intergenic | 40.0% | |
| GGATCAGCCAAATTACCATT+TGG | - | chr6.1:10869354-10869373 | MS.gene87959:intron | 40.0% | |
| GGTGTGTGATTCTTGTAACT+AGG | - | chr6.1:10865442-10865461 | MS.gene87959:intron | 40.0% | |
| GTTCTGTTATGGAGAGAGAA+AGG | - | chr6.1:10867898-10867917 | MS.gene87959:intron | 40.0% | |
| GTTTACATCATGTGGTGAAG+AGG | + | chr6.1:10868814-10868833 | None:intergenic | 40.0% | |
| TACAGACACCACATTAACAG+GGG | + | chr6.1:10865883-10865902 | None:intergenic | 40.0% | |
| TCATGTAAGTACAGCTCAGT+TGG | - | chr6.1:10864903-10864922 | MS.gene87959:intron | 40.0% | |
| TCATTTACCCACTCAAACAG+GGG | + | chr6.1:10866906-10866925 | None:intergenic | 40.0% | |
| TCCCTTAAGTACAGCATAGT+TGG | - | chr6.1:10865339-10865358 | MS.gene87959:intron | 40.0% | |
| TCCGGGACCAAATTGAATAA+CGG | + | chr6.1:10866459-10866478 | None:intergenic | 40.0% | |
| TCCGTTATTCAATTTGGTCC+CGG | - | chr6.1:10866455-10866474 | MS.gene87959:CDS | 40.0% | |
| TCTATTCCCATCACATCAAC+AGG | + | chr6.1:10864713-10864732 | None:intergenic | 40.0% | |
| TCTCTCTCTCTCATCTTGTT+GGG | - | chr6.1:10867472-10867491 | MS.gene87959:intron | 40.0% | |
| TGCGAGACAATTCATCTTAC+AGG | - | chr6.1:10869788-10869807 | MS.gene87959:CDS | 40.0% | |
| TGGGGTGGTGAAAAGTTTAA+AGG | - | chr6.1:10868536-10868555 | MS.gene87959:intron | 40.0% | |
| TTCACGAGATTGTCGTTCTT+CGG | + | chr6.1:10864504-10864523 | None:intergenic | 40.0% | |
| TTCTGCAAGTACAACTCAGT+TGG | - | chr6.1:10865095-10865114 | MS.gene87959:intron | 40.0% | |
| ! | ACACAAATTTGCTCTGGTCA+AGG | + | chr6.1:10867549-10867568 | None:intergenic | 40.0% |
| ! | AGTCCTTCAAAAAAGGCACA+CGG | + | chr6.1:10867964-10867983 | None:intergenic | 40.0% |
| ! | CATGCATGGTTAAGCTTTTG+TGG | + | chr6.1:10866692-10866711 | None:intergenic | 40.0% |
| ! | CATGCTTTTCCCCATAATGA+TGG | + | chr6.1:10866846-10866865 | None:intergenic | 40.0% |
| ! | CATTTGGAATCTCTCTTGCT+TGG | - | chr6.1:10869370-10869389 | MS.gene87959:intron | 40.0% |
| ! | CTAACTGCAATGGTGGAAAA+TGG | - | chr6.1:10867987-10868006 | MS.gene87959:intron | 40.0% |
| ! | GAATAACGGAGCAAAAGTTG+AGG | + | chr6.1:10866445-10866464 | None:intergenic | 40.0% |
| ! | GCATCGACACTTCTAATTGA+AGG | - | chr6.1:10865770-10865789 | MS.gene87959:intron | 40.0% |
| ! | GGACATTTTTGATGTGTTGG+GGG | - | chr6.1:10864770-10864789 | MS.gene87959:intron | 40.0% |
| ! | GGGACATTTTTGATGTGTTG+GGG | - | chr6.1:10864769-10864788 | MS.gene87959:intron | 40.0% |
| ! | TAAGCTTTTGTGGGTATGCA+TGG | + | chr6.1:10866682-10866701 | None:intergenic | 40.0% |
| ! | TCATTATGGGGAAAAGCATG+TGG | - | chr6.1:10866846-10866865 | MS.gene87959:intron | 40.0% |
| !! | AGTACAACTCAGTTGGTAGT+CGG | - | chr6.1:10865102-10865121 | MS.gene87959:intron | 40.0% |
| !! | GATGGTTTGGTACTGTTACA+AGG | + | chr6.1:10866828-10866847 | None:intergenic | 40.0% |
| !! | TGTGGATAATACCGGTTCTT+TGG | - | chr6.1:10869193-10869212 | MS.gene87959:intron | 40.0% |
| !! | TTCACAGGTTGAAGGGTTTT+GGG | - | chr6.1:10867726-10867745 | MS.gene87959:intron | 40.0% |
| !!! | AAGTTGAAAGTTTTGGGCTG+TGG | - | chr6.1:10865653-10865672 | MS.gene87959:intron | 40.0% |
| !!! | ACATTTCTGGTTTTTCACGC+AGG | - | chr6.1:10869678-10869697 | MS.gene87959:intron | 40.0% |
| !!! | AGTTGAAAGTTTTGGGCTGT+GGG | - | chr6.1:10865654-10865673 | MS.gene87959:intron | 40.0% |
| !!! | CTTTTTGTTTTATCCGCGAG+TGG | + | chr6.1:10866291-10866310 | None:intergenic | 40.0% |
| !!! | GGTGTTTTTAGGAATTGCGT+TGG | + | chr6.1:10866730-10866749 | None:intergenic | 40.0% |
| !!! | GGTTTGGAATTTTGCTGTTC+CGG | + | chr6.1:10866477-10866496 | None:intergenic | 40.0% |
| !!! | GTGTACTGCCAAAGCTTTTT+TGG | + | chr6.1:10866568-10866587 | None:intergenic | 40.0% |
| !!! | GTTTGGAATTTTGCTGTTCC+GGG | + | chr6.1:10866476-10866495 | None:intergenic | 40.0% |
| !!! | TTACCGTGTGCCTTTTTTGA+AGG | - | chr6.1:10867958-10867977 | MS.gene87959:intron | 40.0% |
| !!! | TTGTGTTTTGGTACACTCGT+CGG | - | chr6.1:10867563-10867582 | MS.gene87959:intron | 40.0% |
| AAGGACTCTGCTAACTGCAA+TGG | - | chr6.1:10867977-10867996 | MS.gene87959:intron | 45.0% | |
| AATCTGGTGCCCTATATAGG+CGG | - | chr6.1:10866318-10866337 | MS.gene87959:intron | 45.0% | |
| AATGCCTCTGATCATCAGGT+TGG | - | chr6.1:10869594-10869613 | MS.gene87959:intron | 45.0% | |
| ACATTTCAGACCTATGGACG+AGG | + | chr6.1:10868327-10868346 | None:intergenic | 45.0% | |
| ACTCATCCTACTAGATGGGA+AGG | + | chr6.1:10868234-10868253 | None:intergenic | 45.0% | |
| AGAACCGGTATTATCCACAC+AGG | + | chr6.1:10869192-10869211 | None:intergenic | 45.0% | |
| AGAATCTCGAGTTCAAACCC+AGG | + | chr6.1:10865404-10865423 | None:intergenic | 45.0% | |
| AGGAATTCGTCCTTTATGGG+AGG | - | chr6.1:10867816-10867835 | MS.gene87959:intron | 45.0% | |
| ATCTCATCATCTATGCCCTG+TGG | - | chr6.1:10869398-10869417 | MS.gene87959:intron | 45.0% | |
| ATGTACCCTTCCCATCTAGT+AGG | - | chr6.1:10868225-10868244 | MS.gene87959:intron | 45.0% | |
| CAATCTCGTGAACTCAAAGC+TGG | - | chr6.1:10864512-10864531 | MS.gene87959:intron | 45.0% | |
| CACTAATATGTGGGAGTTCC+TGG | + | chr6.1:10866796-10866815 | None:intergenic | 45.0% | |
| CCAAGACTCATCCTACTAGA+TGG | + | chr6.1:10868239-10868258 | None:intergenic | 45.0% | |
| CCATCTAGTAGGATGAGTCT+TGG | - | chr6.1:10868236-10868255 | MS.gene87959:intron | 45.0% | |
| CGATGTCAATTGGAACAGCT+AGG | - | chr6.1:10868667-10868686 | MS.gene87959:intron | 45.0% | |
| CGATTCAAAAAGGCTGTCTC+AGG | - | chr6.1:10868016-10868035 | MS.gene87959:intron | 45.0% | |
| CTCATCCTACTAGATGGGAA+GGG | + | chr6.1:10868233-10868252 | None:intergenic | 45.0% | |
| CTCTCTCATCTTGTTGGGAA+GGG | - | chr6.1:10867477-10867496 | MS.gene87959:intron | 45.0% | |
| CTCTCTCTCTCTCATCTTGT+TGG | - | chr6.1:10867471-10867490 | MS.gene87959:intron | 45.0% | |
| GAGCTGATATGTTGTGTGTG+TGG | + | chr6.1:10866763-10866782 | None:intergenic | 45.0% | |
| GATGTATGTGGGAGCTATGT+GGG | + | chr6.1:10866881-10866900 | None:intergenic | 45.0% | |
| GTAGGATGAGTCTTGGTTGT+TGG | - | chr6.1:10868243-10868262 | MS.gene87959:intron | 45.0% | |
| GTATGATTGCATGAGCAACG+AGG | + | chr6.1:10868861-10868880 | None:intergenic | 45.0% | |
| GTGGGTGACCAATTGGATTA+TGG | - | chr6.1:10869504-10869523 | MS.gene87959:intron | 45.0% | |
| GTTGGAATAGGCAAGGAAGA+AGG | + | chr6.1:10867775-10867794 | None:intergenic | 45.0% | |
| TACAGGAACACTTGGTTGAG+AGG | - | chr6.1:10869805-10869824 | MS.gene87959:CDS | 45.0% | |
| TACGGTGTTCCGCCTATATA+GGG | + | chr6.1:10866330-10866349 | None:intergenic | 45.0% | |
| TACTAAAACCGTACCACTCG+CGG | - | chr6.1:10866275-10866294 | MS.gene87959:intron | 45.0% | |
| TACTCCATAACATAGCCGTG+AGG | + | chr6.1:10869748-10869767 | None:intergenic | 45.0% | |
| TATGGCTGTTCATAGTGCAC+TGG | - | chr6.1:10868476-10868495 | MS.gene87959:intron | 45.0% | |
| TCTCTCTCATCTTGTTGGGA+AGG | - | chr6.1:10867476-10867495 | MS.gene87959:intron | 45.0% | |
| TTACGGTGTTCCGCCTATAT+AGG | + | chr6.1:10866331-10866350 | None:intergenic | 45.0% | |
| ! | GCATTTTTGTGAGGCATGCA+TGG | + | chr6.1:10866706-10866725 | None:intergenic | 45.0% |
| ! | GTTTTTCACGCAGGCTGTAA+TGG | - | chr6.1:10869687-10869706 | MS.gene87959:CDS | 45.0% |
| ! | TGAACAGTTCAAGTTTGGGG+TGG | - | chr6.1:10868521-10868540 | MS.gene87959:intron | 45.0% |
| ! | TGTTTTATCCGCGAGTGGTA+CGG | + | chr6.1:10866286-10866305 | None:intergenic | 45.0% |
| !! | CATAGTGCACTGGTTGATGT+TGG | - | chr6.1:10868486-10868505 | MS.gene87959:intron | 45.0% |
| !! | GCAGCTCTGTTGGTGTTTTT+AGG | + | chr6.1:10866741-10866760 | None:intergenic | 45.0% |
| !! | GTTCACAGGTTGAAGGGTTT+TGG | - | chr6.1:10867725-10867744 | MS.gene87959:intron | 45.0% |
| !! | TGCGTTGGTGCATTTTTGTG+AGG | + | chr6.1:10866715-10866734 | None:intergenic | 45.0% |
| !!! | AGAGGTGGGTTGTTTTGGTT+TGG | + | chr6.1:10866493-10866512 | None:intergenic | 45.0% |
| !!! | TGTGTTTTGGTACACTCGTC+GGG | - | chr6.1:10867564-10867583 | MS.gene87959:intron | 45.0% |
| !! | AAAACAAATTAATAATAATT+AGG | + | chr6.1:10864571-10864590 | None:intergenic | 5.0% |
| !! | AAACAAATTAATAATAATTA+GGG | + | chr6.1:10864570-10864589 | None:intergenic | 5.0% |
| !!! | AAAATATTTTATTCAAAATT+GGG | - | chr6.1:10868170-10868189 | MS.gene87959:intron | 5.0% |
| AAACAGGGGCGGATGTATGT+GGG | + | chr6.1:10866892-10866911 | None:intergenic | 50.0% | |
| AATCTGATGTGTTGGGGCCT+GGG | - | chr6.1:10865384-10865403 | MS.gene87959:intron | 50.0% | |
| ACGAGGACATAGTGAGTGTC+TGG | - | chr6.1:10869565-10869584 | MS.gene87959:intron | 50.0% | |
| AGGAAGAAGGACGAGCAAGA+TGG | + | chr6.1:10867762-10867781 | None:intergenic | 50.0% | |
| ATCCAATTGGTCACCCACCA+AGG | + | chr6.1:10869502-10869521 | None:intergenic | 50.0% | |
| ATGAGATTTGAGTGCAGGGG+CGG | - | chr6.1:10866179-10866198 | MS.gene87959:CDS | 50.0% | |
| CATAGCCGTGAGGAAGCTTT+AGG | + | chr6.1:10869738-10869757 | None:intergenic | 50.0% | |
| CGTCACCTAAAGCTTCCTCA+CGG | - | chr6.1:10869730-10869749 | MS.gene87959:CDS | 50.0% | |
| GACTCTGCTAACTGCAATGG+TGG | - | chr6.1:10867980-10867999 | MS.gene87959:intron | 50.0% | |
| GATGCCAACCTGATGATCAG+AGG | + | chr6.1:10869601-10869620 | None:intergenic | 50.0% | |
| GCTTCCTCACGGCTATGTTA+TGG | - | chr6.1:10869741-10869760 | MS.gene87959:CDS | 50.0% | |
| GGATGAGTCTTGGTTGTTGG+TGG | - | chr6.1:10868246-10868265 | MS.gene87959:intron | 50.0% | |
| GGATGTATGTGGGAGCTATG+TGG | + | chr6.1:10866882-10866901 | None:intergenic | 50.0% | |
| GGGGACCTGGGTTTGAATTT+AGG | - | chr6.1:10864789-10864808 | MS.gene87959:intron | 50.0% | |
| GGGGACTTGGGTTCGAATTT+GGG | - | chr6.1:10864975-10864994 | MS.gene87959:intron | 50.0% | |
| GGTGTGCGATTCTCGATACT+AGG | - | chr6.1:10865195-10865214 | MS.gene87959:intron | 50.0% | |
| GTAACTGCATGAGTCGGTGT+TGG | + | chr6.1:10865831-10865850 | None:intergenic | 50.0% | |
| TAATCTGATGTGTTGGGGCC+TGG | - | chr6.1:10865383-10865402 | MS.gene87959:intron | 50.0% | |
| TCGCAATGCCTCTGATCATC+AGG | - | chr6.1:10869590-10869609 | MS.gene87959:intron | 50.0% | |
| TGGGGACTTGGGTTCGAATT+TGG | - | chr6.1:10864974-10864993 | MS.gene87959:intron | 50.0% | |
| TGGTGCAAGCCGCTAAAATG+TGG | + | chr6.1:10866969-10866988 | None:intergenic | 50.0% | |
| TTTACCCACTCAAACAGGGG+CGG | + | chr6.1:10866903-10866922 | None:intergenic | 50.0% | |
| TTTGATGTGTTGGGGGACCT+GGG | - | chr6.1:10864777-10864796 | MS.gene87959:intron | 50.0% | |
| ! | TTTTGATGTGTTGGGGGACC+TGG | - | chr6.1:10864776-10864795 | MS.gene87959:intron | 50.0% |
| !! | ACAGCATAGTTGGTAGCTGC+AGG | - | chr6.1:10865349-10865368 | MS.gene87959:intron | 50.0% |
| !! | AGCTGGTCTTCACCCTCTTA+AGG | - | chr6.1:10864529-10864548 | MS.gene87959:intron | 50.0% |
| !! | AGGCTGTCTCAGGTCGTTTT+TGG | - | chr6.1:10868026-10868045 | MS.gene87959:intron | 50.0% |
| !! | CAGCATAGTTGGTAGCTGCA+GGG | - | chr6.1:10865350-10865369 | MS.gene87959:intron | 50.0% |
| !! | TCTCGCAGAGAAGCATCATG+CGG | + | chr6.1:10869775-10869794 | None:intergenic | 50.0% |
| !!! | AGGTCGTTTTTGGGAGGATC+TGG | - | chr6.1:10868036-10868055 | MS.gene87959:intron | 50.0% |
| !!! | GGCTGTCTCAGGTCGTTTTT+GGG | - | chr6.1:10868027-10868046 | MS.gene87959:intron | 50.0% |
| !!! | TGTCTCAGGTCGTTTTTGGG+AGG | - | chr6.1:10868030-10868049 | MS.gene87959:intron | 50.0% |
| !!! | TTGGGAGAGGTGGGTTGTTT+TGG | + | chr6.1:10866498-10866517 | None:intergenic | 50.0% |
| AATGCAGGTGCTTGCCTTGG+TGG | - | chr6.1:10869485-10869504 | MS.gene87959:intron | 55.0% | |
| ACATCCGCCCCTGTTTGAGT+GGG | - | chr6.1:10866896-10866915 | MS.gene87959:intron | 55.0% | |
| ATGCAGGTGCTTGCCTTGGT+GGG | - | chr6.1:10869486-10869505 | MS.gene87959:intron | 55.0% | |
| CAAACAGGGGCGGATGTATG+TGG | + | chr6.1:10866893-10866912 | None:intergenic | 55.0% | |
| CAGGTCTAGTTGGGAGAGGT+GGG | + | chr6.1:10866507-10866526 | None:intergenic | 55.0% | |
| CCAAATGCAGGTGCTTGCCT+TGG | - | chr6.1:10869482-10869501 | MS.gene87959:intron | 55.0% | |
| CCAAGGCAAGCACCTGCATT+TGG | + | chr6.1:10869485-10869504 | None:intergenic | 55.0% | |
| GCTTCAGGTCTAGTTGGGAG+AGG | + | chr6.1:10866511-10866530 | None:intergenic | 55.0% | |
| TACATCCGCCCCTGTTTGAG+TGG | - | chr6.1:10866895-10866914 | MS.gene87959:intron | 55.0% | |
| TCAGGTCTAGTTGGGAGAGG+TGG | + | chr6.1:10866508-10866527 | None:intergenic | 55.0% | |
| TGTGTGTGTGGCAGCTCTGT+TGG | + | chr6.1:10866751-10866770 | None:intergenic | 55.0% | |
| ! | TGCCTTGGTGGGTGACCAAT+TGG | - | chr6.1:10869497-10869516 | MS.gene87959:intron | 55.0% |
| TGGTACACTCGTCGGGTACC+TGG | - | chr6.1:10867571-10867590 | MS.gene87959:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 10864398 | 10869831 | 10864398 | ID=MS.gene87959 |
| chr6.1 | mRNA | 10864398 | 10869831 | 10864398 | ID=MS.gene87959.t1;Parent=MS.gene87959 |
| chr6.1 | exon | 10869679 | 10869831 | 10869679 | ID=MS.gene87959.t1.exon1;Parent=MS.gene87959.t1 |
| chr6.1 | CDS | 10869679 | 10869831 | 10869679 | ID=cds.MS.gene87959.t1;Parent=MS.gene87959.t1 |
| chr6.1 | exon | 10866581 | 10866673 | 10866581 | ID=MS.gene87959.t1.exon2;Parent=MS.gene87959.t1 |
| chr6.1 | CDS | 10866581 | 10866673 | 10866581 | ID=cds.MS.gene87959.t1;Parent=MS.gene87959.t1 |
| chr6.1 | exon | 10866392 | 10866496 | 10866392 | ID=MS.gene87959.t1.exon3;Parent=MS.gene87959.t1 |
| chr6.1 | CDS | 10866392 | 10866496 | 10866392 | ID=cds.MS.gene87959.t1;Parent=MS.gene87959.t1 |
| chr6.1 | exon | 10866172 | 10866249 | 10866172 | ID=MS.gene87959.t1.exon4;Parent=MS.gene87959.t1 |
| chr6.1 | CDS | 10866172 | 10866249 | 10866172 | ID=cds.MS.gene87959.t1;Parent=MS.gene87959.t1 |
| chr6.1 | exon | 10864618 | 10864737 | 10864618 | ID=MS.gene87959.t1.exon5;Parent=MS.gene87959.t1 |
| chr6.1 | CDS | 10864618 | 10864737 | 10864618 | ID=cds.MS.gene87959.t1;Parent=MS.gene87959.t1 |
| chr6.1 | exon | 10864398 | 10864529 | 10864398 | ID=MS.gene87959.t1.exon6;Parent=MS.gene87959.t1 |
| chr6.1 | CDS | 10864398 | 10864529 | 10864398 | ID=cds.MS.gene87959.t1;Parent=MS.gene87959.t1 |
| Gene Sequence |
| Protein sequence |
