AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88211


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88211.t1 MTR_4g052530 98.582 564 8 0 1 564 1 564 0.0 1138
MS.gene88211.t1 MTR_4g052530 95.205 584 8 1 1 564 1 584 0.0 1127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88211.t1 AT3G44330 74.074 567 138 4 1 562 1 563 0.0 855

Find 121 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACATTGACACCGTGTTAT+TGG 0.199855 4.4:-49753544 MS.gene88211:CDS
AATTGTGCTCTTCAGTTTCT+TGG 0.209041 4.4:-49746834 MS.gene88211:CDS
TCAAGTGTTGCAGAAGATTT+AGG 0.221551 4.4:-49751145 MS.gene88211:CDS
CTTTGCGGACAACAGTAATT+TGG 0.260388 4.4:-49747868 MS.gene88211:CDS
CACATTCTTCAGCGGTTCTT+TGG 0.280526 4.4:+49754704 None:intergenic
TTCTAGAATTTGTTTAATAA+AGG 0.282297 4.4:+49751272 None:intergenic
GGTGGAGATCCAACTTTCTT+TGG 0.305838 4.4:+49753207 None:intergenic
ATGATCTAATCAGTTTATTT+CGG 0.307918 4.4:-49746700 MS.gene88211:CDS
CCGGTGCTCTGTAGCAATTC+AGG 0.309146 4.4:+49749999 None:intergenic
TCCACCCCTTACAAATATTC+AGG 0.348535 4.4:-49753190 MS.gene88211:intron
TGGCATCATATGACACCTTT+GGG 0.352355 4.4:-49752198 MS.gene88211:CDS
TGGTTGCAGGGATGGTTGCC+AGG 0.354272 4.4:-49752268 MS.gene88211:intron
GGACAATACAATCTGCTGTT+TGG 0.356916 4.4:-49751982 MS.gene88211:CDS
GATGAAGACGAGTGCGATTA+CGG 0.357448 4.4:+49756343 None:intergenic
GCTCATGGGAAAATGATCTA+TGG 0.378313 4.4:-49751323 MS.gene88211:CDS
AGCACCGGTGGTTTGGTTGA+TGG 0.380580 4.4:-49749984 MS.gene88211:CDS
CGGGTTCCATTGTAGTTGTA+AGG 0.382485 4.4:+49751943 None:intergenic
TGGTGCTACTCGAGGTGTTT+GGG 0.382568 4.4:+49747803 None:intergenic
GATATCTCCGGTGTTCCGTT+TGG 0.384689 4.4:-49756254 MS.gene88211:CDS
GACAATACAATCTGCTGTTT+GGG 0.385785 4.4:-49751981 MS.gene88211:CDS
ACATCTGCTGTAGGTAGCTT+GGG 0.388643 4.4:-49750084 MS.gene88211:intron
CTTGCTGTTGCTTCTAGTGT+TGG 0.389075 4.4:-49746867 MS.gene88211:CDS
GACATCTGCTGTAGGTAGCT+TGG 0.390955 4.4:-49750085 MS.gene88211:intron
TTGTATTGTCCTCTAGTCTT+CGG 0.391977 4.4:+49751994 None:intergenic
CAAACACCTGAATATTTGTA+AGG 0.392964 4.4:+49753184 None:intergenic
GCTATTTGCTTAGATAGTAT+TGG 0.394414 4.4:-49751345 MS.gene88211:CDS
GTGGCATCATATGACACCTT+TGG 0.400492 4.4:-49752199 MS.gene88211:CDS
TTGCTGTTGCTTCTAGTGTT+GGG 0.402441 4.4:-49746866 MS.gene88211:CDS
ATTACCCACCATTGCGATAG+TGG 0.410780 4.4:-49752218 MS.gene88211:CDS
TTGCAACGAGAAGTACTAGA+TGG 0.413013 4.4:-49747316 MS.gene88211:CDS
GCTACAGAGCACCGGTGGTT+TGG 0.416449 4.4:-49749991 MS.gene88211:CDS
ATGGTGCTACTCGAGGTGTT+TGG 0.422904 4.4:+49747802 None:intergenic
TCCTCAAAAGCAAAATAAAC+AGG 0.426831 4.4:+49753570 None:intergenic
TATTGGTGGTAGCAAGCCTC+TGG 0.428171 4.4:-49754805 MS.gene88211:CDS
CTCAACATGTCATTTGTTCA+AGG 0.432371 4.4:-49756134 MS.gene88211:intron
AGCAAAGCTGAACATATATC+AGG 0.437609 4.4:-49747266 MS.gene88211:intron
AACAGGATGTATCACCTTAC+GGG 0.437949 4.4:+49751924 None:intergenic
ATCCTTCTTACATTCGATCA+TGG 0.439584 4.4:-49747839 MS.gene88211:CDS
TCCAACTTTCTTTGGTTCAG+TGG 0.446635 4.4:+49753215 None:intergenic
CCGGTGGTTTGGTTGATGGC+AGG 0.449964 4.4:-49749980 MS.gene88211:intron
ATTGGTGGTAGCAAGCCTCT+GGG 0.454869 4.4:-49754804 MS.gene88211:CDS
TCTTATGCTTCAGATTAACT+TGG 0.460383 4.4:+49751119 None:intergenic
CTTAGATAGTATTGGCTCAT+GGG 0.470218 4.4:-49751337 MS.gene88211:CDS
CTGCTGTTTGGGCTAACGTC+TGG 0.478814 4.4:-49751970 MS.gene88211:CDS
TGGTGGTAGCAAGCCTCTGG+GGG 0.481056 4.4:-49754802 MS.gene88211:CDS
GCTTAGATAGTATTGGCTCA+TGG 0.482039 4.4:-49751338 MS.gene88211:CDS
TGACACCTTTGGGGCTGCTC+CGG 0.485813 4.4:-49752188 MS.gene88211:intron
GCCACTGAACCAAAGAAAGT+TGG 0.489173 4.4:-49753216 MS.gene88211:CDS
TCGTTGCAATTTAACTTCAT+CGG 0.491546 4.4:+49747330 None:intergenic
AAATTTACTCACAGGTAAGT+TGG 0.502805 4.4:+49754650 None:intergenic
CTGTTTGGGCTAACGTCTGG+TGG 0.508872 4.4:-49751967 MS.gene88211:CDS
AGTACGAGAGAGATCAGCAC+TGG 0.516095 4.4:+49756181 None:intergenic
TCACCATCTGTCTTCAGCCC+TGG 0.516595 4.4:+49752250 None:intergenic
CCGCCAGTAGTTGCAGTAGC+AGG 0.521090 4.4:+49753492 None:intergenic
AAGCATATTTATGGGCATCA+AGG 0.529020 4.4:-49747906 MS.gene88211:CDS
GGTTGCAGGGATGGTTGCCA+GGG 0.530391 4.4:-49752267 MS.gene88211:intron
ACGAGATCCAAACGGAACAC+CGG 0.533618 4.4:+49756247 None:intergenic
CAGCCTGCTACTGCAACTAC+TGG 0.535144 4.4:-49753495 MS.gene88211:CDS
AACCATGATCGAATGTAAGA+AGG 0.541676 4.4:+49747837 None:intergenic
GCGAGTAGTAATCATGATGA+TGG 0.542254 4.4:-49754729 MS.gene88211:CDS
ACTTGTACGACAGAGTATAT+TGG 0.551265 4.4:-49754822 MS.gene88211:intron
ACCTGAATATTTGTAAGGGG+TGG 0.552902 4.4:+49753189 None:intergenic
CACCCTCTCTGAACTCTCTA+CGG 0.557086 4.4:-49750024 MS.gene88211:CDS
CGGAGTCGAAGAGGATTTCG+CGG 0.558974 4.4:+49756363 None:intergenic
ATCAAGAAGAATGATGCCTC+TGG 0.560007 4.4:-49753519 MS.gene88211:CDS
TGATGCCACTATCGCAATGG+TGG 0.566504 4.4:+49752213 None:intergenic
ATCTAATCAGTTTATTTCGG+CGG 0.568543 4.4:-49746697 MS.gene88211:CDS
CAGCAAGTCAAACGTGACAC+TGG 0.568984 4.4:+49746883 None:intergenic
AAACACCTGAATATTTGTAA+GGG 0.570541 4.4:+49753185 None:intergenic
AAAGAACGTACAGATCTTTG+CGG 0.571521 4.4:-49747883 MS.gene88211:CDS
CTTATCCAATACGATATCTC+CGG 0.573897 4.4:-49756266 MS.gene88211:CDS
TATTCGAATCCGAAGACTAG+AGG 0.576654 4.4:-49752003 MS.gene88211:CDS
CTGCTACTGCAACTACTGGC+GGG 0.584909 4.4:-49753491 MS.gene88211:intron
AAGAGGATTTCGCGGTTGCG+AGG 0.587745 4.4:+49756371 None:intergenic
CGAGTAGTAATCATGATGAT+GGG 0.590493 4.4:-49754728 MS.gene88211:CDS
GGAAGCGATAGCAATGGAAG+TGG 0.595409 4.4:-49752069 MS.gene88211:CDS
CAACTACAATGGAACCCGTA+AGG 0.596945 4.4:-49751938 MS.gene88211:intron
TGCAACGAGAAGTACTAGAT+GGG 0.597528 4.4:-49747315 MS.gene88211:CDS
CGTAGAGAGTTCAGAGAGGG+TGG 0.599324 4.4:+49750025 None:intergenic
GAACACCGGAGATATCGTAT+TGG 0.602447 4.4:+49756261 None:intergenic
TGTTTGGGCTAACGTCTGGT+GGG 0.605689 4.4:-49751966 MS.gene88211:CDS
TTGGTGGTAGCAAGCCTCTG+GGG 0.607148 4.4:-49754803 MS.gene88211:CDS
CTAGCAAGACGAGATCCAAA+CGG 0.609460 4.4:+49756239 None:intergenic
GTGCGATTACGGAGTCGAAG+AGG 0.609499 4.4:+49756354 None:intergenic
TGCAGTAGCAGGCTGACCAG+AGG 0.611293 4.4:+49753503 None:intergenic
GGTGGTAGCAAGCCTCTGGG+GGG 0.611979 4.4:-49754801 MS.gene88211:CDS
GCCTGCGTCGACCTCTGTGA+CGG 0.615505 4.4:-49756314 MS.gene88211:CDS
CGAAATGAAGAGAAGCGGCA+TGG 0.615550 4.4:+49756207 None:intergenic
TAATTGTAGGCGTTATCAGT+GGG 0.618232 4.4:-49752090 MS.gene88211:intron
GGTGGGCCTTACAACTACAA+TGG 0.619306 4.4:-49751949 MS.gene88211:CDS
TGCCGTAGAGAGTTCAGAGA+GGG 0.620583 4.4:+49750022 None:intergenic
AGAACCGCTGAAGAATGTGT+TGG 0.621201 4.4:-49754700 MS.gene88211:CDS
CCTGCCATCAACCAAACCAC+CGG 0.622459 4.4:+49749980 None:intergenic
CTTCTTGATATCCAATAACA+CGG 0.623420 4.4:+49753533 None:intergenic
AGATATCGTATTGGATAAGA+CGG 0.626065 4.4:+49756270 None:intergenic
AACACCTGAATATTTGTAAG+GGG 0.627059 4.4:+49753186 None:intergenic
GCCGTCACAGAGGTCGACGC+AGG 0.628037 4.4:+49756313 None:intergenic
GTAATTGTAGGCGTTATCAG+TGG 0.631414 4.4:-49752091 MS.gene88211:intron
CCTGAATTGCTACAGAGCAC+CGG 0.633915 4.4:-49749999 MS.gene88211:CDS
ACATACCGGAGCAGCCCCAA+AGG 0.637663 4.4:+49752183 None:intergenic
GGCATCATATGACACCTTTG+GGG 0.639014 4.4:-49752197 MS.gene88211:CDS
ACTAATTGCTGAGTCTCTTG+CGG 0.641944 4.4:-49749844 MS.gene88211:intron
CCTGCTACTGCAACTACTGG+CGG 0.643000 4.4:-49753492 MS.gene88211:CDS
TGTACGACAGAGTATATTGG+TGG 0.643856 4.4:-49754819 MS.gene88211:intron
GATGCCACTATCGCAATGGT+GGG 0.644935 4.4:+49752214 None:intergenic
TAGCAATGGAAGTGGCATTG+TGG 0.650973 4.4:-49752061 MS.gene88211:CDS
GGGAGCGAAATGAAGAGAAG+CGG 0.652359 4.4:+49756202 None:intergenic
TCATCCAACACATTCTTCAG+CGG 0.659873 4.4:+49754696 None:intergenic
AGAGGTCGACGCAGGCGACG+AGG 0.660068 4.4:+49756321 None:intergenic
GAATTGCTACAGAGCACCGG+TGG 0.660576 4.4:-49749996 MS.gene88211:CDS
TTGCCAGGGCTGAAGACAGA+TGG 0.664980 4.4:-49752253 MS.gene88211:CDS
CTACGGTGGCGCCGTCACAG+AGG 0.667503 4.4:+49756303 None:intergenic
GACATGTTGAGCTCACGAAG+AGG 0.668393 4.4:+49756146 None:intergenic
AAGACGGTAAACATCGACTA+CGG 0.671668 4.4:+49756286 None:intergenic
GTTTCTTGGTCATCACTACG+AGG 0.684593 4.4:-49746820 MS.gene88211:CDS
TTTCTTGGTCATCACTACGA+GGG 0.687354 4.4:-49746819 MS.gene88211:intron
GTACGAGAGAGATCAGCACT+GGG 0.694728 4.4:+49756182 None:intergenic
ATATGATGCCACTATCGCAA+TGG 0.698292 4.4:+49752210 None:intergenic
TCAGTGGGAAGCGATAGCAA+TGG 0.705355 4.4:-49752075 MS.gene88211:CDS
ACGGTAAACATCGACTACGG+TGG 0.743044 4.4:+49756289 None:intergenic
GTGCCGTAGAGAGTTCAGAG+AGG 0.752779 4.4:+49750021 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.4 gene 49746667 49756414 49746667 ID=MS.gene88211
chr4.4 mRNA 49746667 49756414 49746667 ID=MS.gene88211.t1;Parent=MS.gene88211
chr4.4 exon 49756135 49756414 49756135 ID=MS.gene88211.t1.exon1;Parent=MS.gene88211.t1
chr4.4 CDS 49756135 49756414 49756135 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49754662 49754831 49754662 ID=MS.gene88211.t1.exon2;Parent=MS.gene88211.t1
chr4.4 CDS 49754662 49754831 49754662 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49753492 49753595 49753492 ID=MS.gene88211.t1.exon3;Parent=MS.gene88211.t1
chr4.4 CDS 49753492 49753595 49753492 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49753191 49753257 49753191 ID=MS.gene88211.t1.exon4;Parent=MS.gene88211.t1
chr4.4 CDS 49753191 49753257 49753191 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49752189 49752281 49752189 ID=MS.gene88211.t1.exon5;Parent=MS.gene88211.t1
chr4.4 CDS 49752189 49752281 49752189 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49751939 49752103 49751939 ID=MS.gene88211.t1.exon6;Parent=MS.gene88211.t1
chr4.4 CDS 49751939 49752103 49751939 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49751272 49751412 49751272 ID=MS.gene88211.t1.exon7;Parent=MS.gene88211.t1
chr4.4 CDS 49751272 49751412 49751272 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49751096 49751173 49751096 ID=MS.gene88211.t1.exon8;Parent=MS.gene88211.t1
chr4.4 CDS 49751096 49751173 49751096 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49749981 49750093 49749981 ID=MS.gene88211.t1.exon9;Parent=MS.gene88211.t1
chr4.4 CDS 49749981 49750093 49749981 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49749845 49749905 49749845 ID=MS.gene88211.t1.exon10;Parent=MS.gene88211.t1
chr4.4 CDS 49749845 49749905 49749845 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49747761 49747928 49747761 ID=MS.gene88211.t1.exon11;Parent=MS.gene88211.t1
chr4.4 CDS 49747761 49747928 49747761 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49747267 49747368 49747267 ID=MS.gene88211.t1.exon12;Parent=MS.gene88211.t1
chr4.4 CDS 49747267 49747368 49747267 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49746820 49746909 49746820 ID=MS.gene88211.t1.exon13;Parent=MS.gene88211.t1
chr4.4 CDS 49746820 49746909 49746820 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
chr4.4 exon 49746667 49746729 49746667 ID=MS.gene88211.t1.exon14;Parent=MS.gene88211.t1
chr4.4 CDS 49746667 49746729 49746667 ID=cds.MS.gene88211.t1;Parent=MS.gene88211.t1
Gene Sequence

>MS.gene88211

ATGGCTACGCCGTCGAAAAAACCTCGCAACCGCGAAATCCTCTTCGACTCCGTAATCGCACTCGTCTTCATCCTCGTCGCCTGCGTCGACCTCTGTGACGGCGCCACCGTAGTCGATGTTTACCGTCTTATCCAATACGATATCTCCGGTGTTCCGTTTGGATCTCGTCTTGCTAGCATCAATCACCATGCCGCTTCTCTTCATTTCGCTCCCAGTGCTGATCTCTCTCGTACTGTTCTTCTTATTCCTCTTCGTGAGCTCAACATGTCATTTGTTCAAGGTTCGCAATTTTCTTCTTTTTATTTTTATTTATTTTTTCAATTTAATTTTTAGTTGTTTTTGTTGATTGTGAATGATTTTGATGTGGAACGTAATTTTGAATTACGGAAGTTATTAATAGTGTTTATGAAACTGTTGAAGTGTTTTTATGTTTAATGCTAATTTTTTTTAGTTGTTAATTTTTTATTTTATTTTCTGATTGTTTATTGGAAGATATAAATTTGGATAATAATTTTTAGTTTGGGACAAAAAAAGTAAGTAGAGTTGTAATGTTATGGTTCATTTAATGTTATAGAATGAGAATGTATTAATTATATATTTCTGAAAAGTATTTAAAGGAATAATCGTAGGAATACATTAGGGGTTTTGATGGTGAGTGTTGAAAATTTGTAGATGCTACATCGGTTAAGATGTCTTTTAGATATAGGGTATGTTTGGATTGAGTTATTTGAGCTTATCAGCTGGTATAAACCCTTGATTGTACTGTTTGGGAGAGCTTATGAAAACAATTTATAATATGGCCCTGTTTGGATAAACAACTTAATTTGCAGCTTATAATATAAGAAATTATCATGATAAGTGCTTAGTTATAAGCTATTTTTATAACGAGATATAATGAAGTTAAAATGTTTTTTTAACACGCTATAACCTGTTTTTATAAGCTATCTTGGAGAGGTTATTAGAATAAGCTGATATAACAAGATATAAAATGAAGTTAAATTGTTTTTTTAATACACTATATCCTGTTTTTTTAAGCTATCTTGGAGAACTTATTAACATAAGCTGAGCTTATGAACATGTCATAAGTTGTTTACATAAATTCAGCCAGACACTCTTCTTAGTGCTTGTGCAAGTAGTTCAGCTCAAATAAGCTAATCCAAACAGATCCTATGTCCATAAGCTACTCAGCTTATTTCCATAAACTCTCTAATATGGCTTATGTTAGCAGATTATAGCTTATAGCTTATATGAAAGTATTTTGACTTTATTTTATCTTTTTCTAAAGAAATAGCTATATACATAAAATAAGAGCATAATTAAGCAGTTTATCCAAACAGGGCCATAGTAATGCAGCTGGATCTGTAAACGTAAAATATCATAGTAATAAATTTGTTGTAACAATCAGGTTTGAAATGGGTCTTGTCCATGAAGCAAGCACTTGTTGTGTTTGCCCCCATCCCAAAATTATCTGTTCTAGTTGAGCTCTGAAAATTGTCGTTACTATTTTGTTTTGATCATTATGGGATTTTCGTTCATAATTATAAATTTAACAAGATCACAATTTTGTGTGACTTGTACGACAGAGTATATTGGTGGTAGCAAGCCTCTGGGGGGTTTAATATTTTTGCTGCCCCAGATATTCAGTTTTGAAAACAAAGGTGGTGCGAGTAGTAATCATGATGATGGGACCAAAGAACCGCTGAAGAATGTGTTGGATGAGCTTGAACAAATACTTATACACACCAACTTACCTGTGAGTAAATTTCAGAAAGCTGCTCCTTTATCCAGATTGTTGTAAACTTGTAATTATTTTTCTTTTGGAATTTCAAATGAAATGAACTGTTTGCTTTTGAATCAGGTAGCAAAGATTAACTGCTTAGTTCATTAACTTTGATTTCCTTAACATTATCATTTTTTTTATTCTACGTAATCAAGTCATCTTGTACTGTTTAAAGTAATTTATGCAGTGTATTTGTGTTCTCCTAAAAGTTAACCTGTTACTACCAAACTTATTGATTTCTTTCAATGATTTGTTTGATGAAGTAGTACGGGTTTGGAAATTTCTCATTGATTTGTTGATGATTGAATACTGTGGCTACTGGCTAGCTTCTTTATGTTCAAGTCAAATTTGTTTTGAATTACAAATGAAATCATGTGCATGCAGTAGTGATCTACAGGTCTTGTTTATTCGCCTGCTTTAGATGATTTAGTTTTTTATTTTTTTAATATAAATTCTGGCAGATGATTTATGATTATGAACCTAATTTTGATATGTATCACTATGGATGCTTCTCATGTTGGCCTTGTGTGTTTGCATGTCTTAGTTCTTGATTGGTCAGTTTGTGACTGGAGGTACTGACAAAATTGGAATGTTTACCATAAGTTCTACTGTATATCATAGTCTTTGTCCTCTACTACCATTTCTGTAGCTTATAGTGTGGGCTATTCCGCATTCTTAAATTTTGTCTCATAACCAATGCTCCTAGTAAGGTTCTGAAATTGGTTTCTCAATTTTTTGAAGACCAATATCTGCGTGCTGCTTGTTATGATGATGTCTTTAGTGTGGTGTGTCAGAAAGGAAAGGGATGCTTCTATGATATGAATTGCATTGTTCTTCCATACTTAGCTATTTTTTTTTCCAATTTATCCAAGGATGTGTTTTTTGCTTTTAGTATGTGATATGGCATCCTTTTCGATTAATGTGAAGGAGCTCGGTTCTTGCAATTTGTTTTATGTTTCTTACTATTATGCTATCTTTAACCTCTATTATTTTTATTTATTTTTAGTTTAACTTTTGTAGTGCTGTGTTCTTTTTGCAGTATCCTGTTTATTTTGCTTTTGAGGATGATAACATTGACACCGTGTTATTGGATATCAAGAAGAATGATGCCTCTGGTCAGCCTGCTACTGCAACTACTGGCGGGTAAGTTTAATCGGAGAATAATGCTTTCATTGTTTTACGTAAATTTGCAAATTTCTCTTGATGGTCACGACAAGTGACATTGAATTTTATGAATTGAATATTACATATTATTTATTCTACATAATTTCAACTTATGGGTATTAGATCTTGTGTTGTGTTATTGAATTGAATATTTTATGTTCCATTTCTTCCTTTCTTTCTGTGTTTTATTTTTTGTTTTTTAAAATGTTGTAGGTACAAGTTTGTAGTTTCAGCCACTGAACCAAAGAAAGTTGGATCTCCACCCCTTACAAATATTCAGGTGTTTGTTCGGCCTTCTTTTTGTAGAAATACTATGGGGTTGATACTGTTGGGTGATGGGTGTGCAAATTCTTTTAGATTAACAATAGCTTTGAATTTTTTAGACATCATTTTAATCTTTATTGAATATATGAATATCTCAACAATCTTATTTGAATTCAAACTAAATTTATTTCAAATAGATGGATATGTAAGTACAGGAACATGTTTTTAACATTGGTCTCCTTTTGTTTTACTTACTGTATTTTCCCCAGTAATTCTCAGACGTTATCTGTGAAAACTTTTAAGCTCTGAATCTAAGGCCCTAAATAGGCTCGAGGGTTGTGTATTGAGCAGCAGTTTAGCTACATGTTTAAGCAAAAACAATAAATACTCGGTACTAATAGGATAATCTGCTTCTTGTCATATTCTTTTTCCAGGATATTGATTGTAATTTTATTTTCTTAATGCATTTTAGTGATGACTCGGGAAAATTTGATAGGTTGTAGACTCTTGTCATACTAGTTACCTGTTTGAATAATGAGGTACATGATTGTGAAGTCTCAATTCCTTACTTCTATATCACTTTCATTTGCCTTGCTCTATTTTTCTACTTGACGATACTTTTCCTTTTGATTTTTTTCTTCTCGAGAAAGCGTAGGCATGCTTAGTTTTGTAATTTCTTAAATTCTTGTCTCCTTTCTTGTTATCATCTTCCATAGTTTGCGCAAGTTTCGTTTTAATTATAATATTGAAATGTGAGCTTGTGCTTTATGTTATAAACTTGGAAAACATACAGTTTATGCTTTATAAAATGTATCTGATAAAGACACGTGTTACATATATCTTTTTAGTCACAAGCGTTCTAAAGTTAATGTGTTTTGGATAGAAAGAACTTGTGTGGATATTGATATCTTTTATCTGGTTGCAGGGATGGTTGCCAGGGCTGAAGACAGATGGTGATTCTCATCAATTACCCACCATTGCGATAGTGGCATCATATGACACCTTTGGGGCTGCTCCGGTATGTTATTTATTAATTTCTCCACCTATAAAACAATACTGAATTACCTTCTTGGTTAGCTGTGTTAAAGCATCTGTAATTGTAGGCGTTATCAGTGGGAAGCGATAGCAATGGAAGTGGCATTGTGGCTCTTCTTGAAGTAGCTAGATTATTCTCTCTTTTATATTCGAATCCGAAGACTAGAGGACAATACAATCTGCTGTTTGGGCTAACGTCTGGTGGGCCTTACAACTACAATGGAACCCGTAAGGTGATACATCCTGTTTGGAAGATCATTTTTTTTTTGGCTCAAATGCTGTTTTGATCCCCTTAAGAGATGGTCAATCTGTAATTTTGGTCCCGTGATTTCTAATTTCAAATTTAGTCCCCTAATTTTTTAAAACTTGTACATTTTGCCCTGCTTCTAATTTTTACCAAGATTTTGTTGTTGTTTGTGGCAATTTTGTAAGTGATGTGGATATGAATAGGTTCCTATGTGTTTAAATAATTTTAAACACATTTATTTTTGAAATATAATAAATGCTTAAAACTTTAAAAATTCTGTTTTTAAAATAAAATACAAATATGAAGCATAAGAAAAGTTTTCCAAATTTATATAAATTAAGGGACCAAAGTTGTGAAATTAAAAATGAGGGGACCAAAATTGTGGGTTGACCATAATAAGGCGACCAAAACTGCTTTTATGCCTTTTTCTTTCTTTCGTCTGACAGGTCTGTGACATGTCAGCATGCTCTATGTGTTATGATTTTTATAACTAATAGTTTTGTATTTTTCAGTGGCTTCAGAGCTTTGATCAACGTCTGCGCGAGAGCATTGACTATGCTATTTGCTTAGATAGTATTGGCTCATGGGAAAATGATCTATGGATTCATGTTTCTAAGCCTCCAGAAAATGCCTTTATTAAACAAATTCTAGAAGTAAGTGACTCTGTCACAGTGGCTTGGACTTCACTAAAATAAATTGATTGACTTGCAGTTGAGTTACTGACTTCATTTTATGGAAAATATTGGTGTAGGATTTTTCAAGTGTTGCAGAAGATTTAGGTTTCCAAGTTAATCTGAAGCATAAGAAAATAAATATTTCAAATCCTCGAGTAAGTGATAAACTCTCACAGTTCTGCTTCACCTGCATAGCTCTGACAGTTTATAGTTAGCTTCCATTCAACCTCATGTGGCAGTGAAATTCGCATCCCTGTCCAACTCATTTTATTAACATGAACTGGACATTTTATCTTATATGGTTTGCACACTTATCAAAGAAATTTGAAACTATGATATATCTTTTTTCAAATTATAATAATCTGAAATCAAAACATACTCTTTATTTCTTTTCTTTGTGCTTAATTCATGAGATCCTTGAGATCTGGTTCTTGAAAGAAATATTTTTTAAGGCAAAACTACAATGGAGGGGTCCTTTAACATACTTTAAAGTTTCAAACAGGTTCTTTATCTTTTTTTTTCCGTGTCAAATCAGTTCTTTATCATTAAAAATGGTTACACCGTTGAATCAACATTCATTCTTAGTCCACTTCTGTTACAACTTTTTGTACTTGATTATTGAATGATATACTGTAAGTAATGTTTCACAACTCAGCGCCAAAATTAGACCCTCATTGAAAATGAGTTCACAATCTTAGATAAGAAGTAAAACCAATTATTTTCATTTTGATGGATTAGATATTGTAACTGTCATTACAATGTAATTTAGATGTTTTCTTGATGAATTCTAAATATAATTTACTTTTTTGAATGGTCAAGTTAGACTTTTGGTCACATATTTAGATGCAAAATGAAGTTTGGTACCACATCGTTGACGATTTTAAACATTAAGAATCAACCTGACATGAAGAAAGGACTAGCTTGACACAAAAAAAAGAATGAAGACCTATTTGAAATTTTAATGTAGTTTTGCCGATTTGTAACGATTTAATGTTTCCTCTACAACTGCCTATTGGTTACTATTTCTTTCCTCTAATCATACCAGCTTGCATAATAAGTTTTATTGAAATATACTTCCTGATAGCAAGCATGTACTTCCTACATTTGTCTAACTACTATTTCTAAAGCTGGGTATTAAAGCTTGACATCTGCTGTAGGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACCCTCTCTGAACTCTCTACGGCACCTGAATTGCTACAGAGCACCGGTGGTTTGGTTGATGGCAGGTTCATCTTTGAACTTGAATGAATGCAAGAATTTTATAATTTCTATGCCTGTTTGCTGAGACCTTTGTTCTGCAGGCAATTTGTCAATGAAGCAGCAATTGTCAGAAGTGTGAAACTAATTGCTGAGTCTCTTGCGGTAAGTATATTTTTAGATTGGGGGACCCATCATACTGTCTTCGTAATATTGCTTGGAATATAGAGTTAATACTCACTAGATTTTGTCAAAGTTAGCATGAGTATATTTTTCTCTAGGAGTAACAACTATTTCTTCATTTATTATTCATTAGATTTTGTCGAAGTTAGTGTGAGTATATTTTTCTCTAGTAGTAACAACTATTTCTTCATTTATTATTCATTAGATTTTATCGAAATTAGTGTGAGTATATTTTTCTCTAGTTGTAAAAATATACCAGAGGTCAATGAGTTGGATCCAAATATGGTTTTTGACAGAACACTATGGCGTCATTTGATCCATGTAGCCGACCCCGCTTAGTGGGATAAGGCTTGGTTGTTGTTGTTGTTGTTGTATTTTTCTCTAGTTGTAGTAACAAAACTATTTCTTCATTGGTTATCAAGTTGATGTTTCTACTACTATGCGCATTTAATTGCAGACATGGTAGCATTTGTGGCCCTGCCAGAATGATTTAGCTTTCTTGACCACCCTTTGATGGATTAGTGGCCCTGCCAATTTGTCTTAACCAAAGACAACCTAGAATCAAGAAAAACTTTAGCTAATTGTTACCGCATGTGGCACTACCTACTTTTATTGTTGATACTGATTCATTTTTGGGTTAAATATGTTTTTGGTCCTTATAAAATTGGGAACTTCTAAGTTTAGTCCTTACTTAATTTTAATAGCATTTTTAGTCCCTACAAAAAGAAAATTACATGTAATTTTAGTCCTTGTAAAAACTAAATATGTTTTTGGTCCTTATAAAATTGGGAACTTCTAAGTTTAGTCCTTACTTAATTTTAATAGCATTTTTAGTCCCTACAAAAAGAAAATTACATGTAATTTTAGTCCTTGTAAAAATTAAATTTGTTTAATTATCCTTGAATTCTTAAATTTTTGAACGATTTTTTGGATACATGTTTAGAACATTATAAAATGTTCATTTACTAAAAAATAGATTTTTTTAACATGAGAAGAATTAAATATGAATTTTTTTAAACGACAAAAGTTCAAGAAAAGAGTAACAAAAATCTGGACGTAGAAATCAAATTTTGAGTTAATATTTTGCAGAGGGACTTTTAGTAATGTTCTTAACAGGTCTACAAAAAATTGTTTAAAAATTCAAGAATTTAAGCATAGTTAAACAAATTTGGATTAAGAAGGGACTAAAACTAAATGCAGAATGTTTTTATAGGGACTAAAAAAGCTATTAAAATTAAGTAAGGACTAAATTTAAAAGGTCCCAATTTTATAGGGATCAAAAACATATTTAACCCTTCATTTTATGATGTGGATTTTATTACATTATAACAGTAGCAATGTATTAAGGGTAGCTAACGAGATCCTTTTGTTTGCGAAATTTCCAATTCTTATTTGTTCAAACACCACAAAAGGGGCGACTAATGGGGCGGAGTTTACTCCGCGATGTTCCTTCTGCCTCAGCTTTCACTGTCCTTTTAAGGATTATCACAGTGGTTGCAAATTATCTTGTTGGCATTTGATTCTATTTAATTATGGGGTTTGCTATTGCTAATGTCATAGTTATATTTATAGTTGATGGTGTTTAATCATAAACATATTTTTTGAATTTGACATGCTTATGTAATTGACATTGTATGCCTTAATGAGGGTTATCCTTTTCTTGATTTGTTCCTATTTATTGTTTGGCTCTTGCAATCTGGCTTATTTGCCAATGAATTATTAAATTATTTGAATACCATAAATTGCCATTACTTTTAAGTGTCCTCTGTTTTTAAACTGCCACTAATATGCAGTATCTTATGATGTGACATGTGGTCTCAAGAAGATTAATTATATATATTTTTTTATGCAAAGCCAAGTTCGTTTATTTAAACAGTCTTTTGAACTGTATTTTGCAGAAGCATATTTATGGGCATCAAGGAAAGAACGTACAGATCTTTGCGGACAACAGTAATTTGGCTGTAAATCCTTCTTACATTCGATCATGGTTAGATGTTTTGTCCCAAACACCTCGAGTAGCACCATTTTTATCAAAAGATGATCCTTTTATTACGGCATTGAAAAAGGTATCATTGGATGTCGGATCATTATAATGTGTAAATTTTTATCATATATTTTACATCTGTTTCAAGTCAAGGATTAAGTCCAGTAGGATGGATATGGCGGTGGGTCGACCAGTTATGGAAATGTTTGCAACAACTTGGGAGTGTATAAATTTTTTTTTGGTTGATAAGGAATTATGTGCTATGGGCTATGTTCTACCTGCTAATATCATGAAATGTTTCTCAAGTAAATAGGCCAAAATTTGCTGTGTATACTATTTGTATTAGTTTATCACGATACCAATAGTATTTGATTGAGGTGCCCGCTGCTCCATTTATTTGGTATCCTATTGAAGCTTGAAGCATTCCTGTTGTTATCGCAAATATACTCATCCAAGTATTCTGCATGTTTATAGGAATTAGAAGATCATACCGATGAAGTTAAATTGCAACGAGAAGTACTAGATGGGATGTTCACTTTCTATGATTCAACTACAGCAAAGCTGAACATATATCAGGTATTTGAAGTTTTTTTTTTTTGTGCCTTATTATGTATTCAAAGATTGGCCATTTTCATTGTCCTTTTTCCCCATTTAGAGCATCTGAATCAAACTTAAAGGGATCTTTGACATAATTTTGTTTAGACCATGTTTGTAGTTAAAGTGTTTTTCAATTCCTTCTGGGTGCAACCATTTTTTGGTTAGTTGACTGTTGACCTGTTTTCCCTTGTTTTCCAAAGGACATATTTTCGTGACTATGAGGAAATTTTCACGACAAACAAAATGTGTTTTATGTTCAAATTTATTGTTTTACTTTCGGGTTCATAGTTGAACATAGTCAGTTGTCTCGAAAGTAAATGTTTTTTGGTTTTACAGGTTGCCAGTGTCACGTTTGACTTGCTGTTGCTTCTAGTGTTGGGATCATATTTAATTGTGCTCTTCAGTTTCTTGGTCATCACTACGAGGGTATCTATTTATTATCAACTAACTTCCGTTGCAAACTTTAGATACGTAGTTTGTATGTGTGCATTTAATCTTAGTGACGTTGTTTTACAGGGTCTTGATGATCTAATCAGTTTATTTCGGCGGCCTCCTTCACGAAAAATGAAGACTGCATAA

Protein sequence

>MS.gene88211.t1

MATPSKKPRNREILFDSVIALVFILVACVDLCDGATVVDVYRLIQYDISGVPFGSRLASINHHAASLHFAPSADLSRTVLLIPLRELNMSFVQEYIGGSKPLGGLIFLLPQIFSFENKGGASSNHDDGTKEPLKNVLDELEQILIHTNLPYPVYFAFEDDNIDTVLLDIKKNDASGQPATATTGGYKFVVSATEPKKVGSPPLTNIQGWLPGLKTDGDSHQLPTIAIVASYDTFGAAPALSVGSDSNGSGIVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLQSFDQRLRESIDYAICLDSIGSWENDLWIHVSKPPENAFIKQILEDFSSVAEDLGFQVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPELLQSTGGLVDGRQFVNEAAIVRSVKLIAESLAKHIYGHQGKNVQIFADNSNLAVNPSYIRSWLDVLSQTPRVAPFLSKDDPFITALKKELEDHTDEVKLQREVLDGMFTFYDSTTAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKMKTA