Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072688.t1 | XP_003625987.2 | 98.4 | 1161 | 18 | 1 | 1 | 1160 | 1 | 1161 | 0.00E+00 | 2291.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072688.t1 | Q6GQT9 | 31.0 | 1090 | 639 | 29 | 6 | 1034 | 8 | 1045 | 3.9e-144 | 514.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072688.t1 | G7KTM5 | 98.4 | 1161 | 18 | 1 | 1 | 1160 | 1 | 1161 | 0.0e+00 | 2291.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene044787 | MS.gene072688 | PPI |
| MS.gene88211 | MS.gene072688 | PPI |
| MS.gene072688 | MS.gene03874 | PPI |
| MS.gene072688 | MS.gene66726 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072688.t1 | MTR_7g109730 | 98.363 | 1161 | 18 | 1 | 1 | 1160 | 1 | 1161 | 0.0 | 2336 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072688.t1 | AT3G62360 | 64.797 | 1159 | 395 | 6 | 8 | 1160 | 11 | 1162 | 0.0 | 1556 |
| MS.gene072688.t1 | AT3G62360 | 63.162 | 1189 | 395 | 7 | 8 | 1160 | 11 | 1192 | 0.0 | 1541 |
Find 280 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGTCTCGCCTCCTCTTTC+TGG | 0.156683 | 7.3:-5340676 | MS.gene072688:CDS |
| TCCTTTGTAATTAAAGTTAA+TGG | 0.170602 | 7.3:-5351611 | MS.gene072688:CDS |
| TGTTGATGCTTAACATTAAC+TGG | 0.181984 | 7.3:+5348590 | None:intergenic |
| ATTGACTCATGTGTCTTCTT+TGG | 0.185010 | 7.3:-5342737 | MS.gene072688:CDS |
| TCTTCTATTGAAGCCATATT+TGG | 0.188138 | 7.3:+5345762 | None:intergenic |
| CTCTTTCTGGTGTTCATATC+AGG | 0.197336 | 7.3:-5340663 | MS.gene072688:CDS |
| GCATTACAAGTTCAAGAAAT+TGG | 0.201593 | 7.3:-5345957 | MS.gene072688:CDS |
| CTTGAAGTTGATGTGGTTCC+CGG | 0.219229 | 7.3:+5334831 | None:intergenic |
| TTTGGCATCCGTTTGTTTCC+TGG | 0.227971 | 7.3:+5352266 | None:intergenic |
| ATGCTTCTTCCTTGCTTCTA+TGG | 0.234325 | 7.3:+5345976 | None:intergenic |
| GTTATTCTTGTAGGTGGAAT+TGG | 0.243940 | 7.3:-5349658 | MS.gene072688:intron |
| TATAGAAACAACTCAGTATC+TGG | 0.258710 | 7.3:-5337912 | MS.gene072688:CDS |
| TTCAACTGAAACTCCTCCTT+TGG | 0.261974 | 7.3:+5335825 | None:intergenic |
| TGCTCAGGTATTGCCAAATA+TGG | 0.266920 | 7.3:-5345775 | MS.gene072688:intron |
| GGACAAATAAATGTCCTTTC+CGG | 0.267562 | 7.3:-5342534 | MS.gene072688:CDS |
| GCTTCTGCTGATTCCATCTA+TGG | 0.268002 | 7.3:-5352500 | MS.gene072688:CDS |
| GTTACTTACATGATGTTCTC+TGG | 0.268353 | 7.3:+5340860 | None:intergenic |
| GGAGAAAAGCATCTTATTAA+AGG | 0.271049 | 7.3:-5342555 | MS.gene072688:CDS |
| AAAACTAAATTCATGTATTC+CGG | 0.272345 | 7.3:+5342760 | None:intergenic |
| TCTTCCATGGTCACTGATTC+GGG | 0.276213 | 7.3:+5343072 | None:intergenic |
| ATGCTATCAAAGTCGCTAAA+AGG | 0.278501 | 7.3:-5335711 | MS.gene072688:CDS |
| TTGACTCATGTGTCTTCTTT+GGG | 0.279133 | 7.3:-5342736 | MS.gene072688:CDS |
| GGCTTAGTCACTCTGTTATC+TGG | 0.280904 | 7.3:-5335853 | MS.gene072688:CDS |
| ATAAATTCTTACAGTGCTAT+TGG | 0.282828 | 7.3:-5335874 | MS.gene072688:intron |
| TTCCAGGGAAACCCTATATT+AGG | 0.283328 | 7.3:-5349236 | MS.gene072688:intron |
| CTGTCTTTGAGTATTCTGTT+TGG | 0.284849 | 7.3:-5342395 | MS.gene072688:CDS |
| CAAGAAATTGGAGAATTATA+TGG | 0.286191 | 7.3:-5345945 | MS.gene072688:intron |
| ATGATCTTTGTGGTTTAGTT+AGG | 0.292647 | 7.3:-5345722 | MS.gene072688:CDS |
| CAGTGACCATGGAAGATAAT+TGG | 0.300405 | 7.3:-5343065 | MS.gene072688:CDS |
| TGTTAACTGTTACAGGTAAC+TGG | 0.308644 | 7.3:-5346872 | MS.gene072688:intron |
| GAAACAAACGGATGCCAAAT+TGG | 0.314612 | 7.3:-5352262 | MS.gene072688:CDS |
| ATCTTCCATGGTCACTGATT+CGG | 0.315998 | 7.3:+5343071 | None:intergenic |
| CTCTGTAGGTTCTCTATATC+TGG | 0.316967 | 7.3:-5351198 | MS.gene072688:intron |
| TTTAATGTCTAGGTTCTTCC+TGG | 0.320833 | 7.3:-5344849 | MS.gene072688:intron |
| TGTCTTTGAGTATTCTGTTT+GGG | 0.321332 | 7.3:-5342394 | MS.gene072688:CDS |
| TTGTAGCCCATCCATCTAAA+AGG | 0.322595 | 7.3:-5342576 | MS.gene072688:intron |
| AATATATGGACTCCTAATAT+AGG | 0.326208 | 7.3:+5349224 | None:intergenic |
| GACATGTGAATAATCCAATT+TGG | 0.330019 | 7.3:+5352248 | None:intergenic |
| TGAACTAGTGCCCTACTATA+AGG | 0.331374 | 7.3:-5348651 | MS.gene072688:CDS |
| CCTCTGAATACAAGAATATA+TGG | 0.332768 | 7.3:+5349210 | None:intergenic |
| AGTCGCTAAAAGGGATGTTA+TGG | 0.333306 | 7.3:-5335701 | MS.gene072688:CDS |
| AACTGAGGATATCAAGGGTT+TGG | 0.335214 | 7.3:-5335538 | MS.gene072688:CDS |
| ACTTGGAAGAAGTTCGAAAT+TGG | 0.340693 | 7.3:+5335372 | None:intergenic |
| TCCAGATTCTCTTTCTGTTA+AGG | 0.346413 | 7.3:-5335653 | MS.gene072688:intron |
| GATATGAAAGTTGAAGTTAA+AGG | 0.347337 | 7.3:-5349827 | MS.gene072688:CDS |
| GTGGAATTGGGCATTGGAAA+TGG | 0.349526 | 7.3:-5349645 | MS.gene072688:CDS |
| CAAGCAATTGAGCTCGAATC+AGG | 0.350823 | 7.3:-5337397 | MS.gene072688:CDS |
| CATGAGTCCAGCAGCATTAT+CGG | 0.352438 | 7.3:+5344794 | None:intergenic |
| GTATTTGATAGTTTGTTTCC+TGG | 0.354735 | 7.3:-5337873 | MS.gene072688:CDS |
| TGGAATTGGGCATTGGAAAT+GGG | 0.356891 | 7.3:-5349644 | MS.gene072688:CDS |
| ATCGCAGGCGAGTTCATCTT+TGG | 0.358289 | 7.3:-5352295 | MS.gene072688:intron |
| AGGCCACGCGAGTAGCTTAC+AGG | 0.361880 | 7.3:-5337351 | MS.gene072688:intron |
| AAGAAACAAACAGATGGAAA+TGG | 0.362628 | 7.3:-5345552 | MS.gene072688:CDS |
| CATATATGTGTTGAATTTCC+CGG | 0.363064 | 7.3:-5342779 | MS.gene072688:CDS |
| TTTCCCGTGGGACTTGAGTA+TGG | 0.368060 | 7.3:+5342434 | None:intergenic |
| CAACTTACAATTGTCATATC+TGG | 0.370044 | 7.3:+5335495 | None:intergenic |
| GTTGAACTATTGTCTCCTTC+TGG | 0.372002 | 7.3:-5351108 | MS.gene072688:CDS |
| TTATCTTTGAGTGGTGATAA+TGG | 0.375443 | 7.3:-5337936 | MS.gene072688:CDS |
| CAACTGTGAATTTGAAGATT+CGG | 0.376310 | 7.3:-5342906 | MS.gene072688:CDS |
| TTGATAGCATAGACAGTATC+AGG | 0.378590 | 7.3:+5335724 | None:intergenic |
| TCAACTGAAACTCCTCCTTT+GGG | 0.387705 | 7.3:+5335826 | None:intergenic |
| TGATGTTGGTTATAATGTTC+AGG | 0.391109 | 7.3:-5340533 | MS.gene072688:CDS |
| GTTATACTGCTGTATTCCTT+TGG | 0.391986 | 7.3:+5334750 | None:intergenic |
| ACATTAACTGGGACACTAGA+TGG | 0.394404 | 7.3:+5348602 | None:intergenic |
| CACAAAGGAGCCATCAGTTC+CGG | 0.394925 | 7.3:+5340573 | None:intergenic |
| ACCTTAACAGAAAGAGAATC+TGG | 0.399447 | 7.3:+5335652 | None:intergenic |
| TCTATATCTGGTAGAGTTGT+GGG | 0.404597 | 7.3:-5351186 | MS.gene072688:CDS |
| TTGTTTACAAATGTAATTCC+AGG | 0.405641 | 7.3:-5351042 | MS.gene072688:intron |
| GCAATTATAAGAGGAAATAC+TGG | 0.406420 | 7.3:+5335033 | None:intergenic |
| AAATGGGAATTTCTGCTTTG+AGG | 0.407460 | 7.3:-5345535 | MS.gene072688:intron |
| GAATCCACCGCAGCCATAGA+TGG | 0.409957 | 7.3:+5352487 | None:intergenic |
| AAGAAATAACAAACCTTCTC+AGG | 0.410403 | 7.3:+5351566 | None:intergenic |
| AAATTCACAGTTGACCCATC+TGG | 0.413826 | 7.3:+5342916 | None:intergenic |
| TTATTCTTGTAGGTGGAATT+GGG | 0.418787 | 7.3:-5349657 | MS.gene072688:intron |
| TGTTTGCAAGGTTCTGCTAA+TGG | 0.419182 | 7.3:-5349170 | MS.gene072688:CDS |
| ATCTCCACTCATGATGTTGA+TGG | 0.419839 | 7.3:-5342952 | MS.gene072688:CDS |
| GTTATCATTTAAAACAAGTT+GGG | 0.421416 | 7.3:-5338046 | MS.gene072688:CDS |
| ATTGTAAGTTGTCATGTTGA+AGG | 0.424855 | 7.3:-5335483 | MS.gene072688:CDS |
| ATATATGGACTCCTAATATA+GGG | 0.425298 | 7.3:+5349225 | None:intergenic |
| CGGAACTGATGGCTCCTTTG+TGG | 0.426816 | 7.3:-5340572 | MS.gene072688:CDS |
| AACTGTGAATTTGAAGATTC+GGG | 0.426894 | 7.3:-5342905 | MS.gene072688:intron |
| TGGCTGCGGTGGATTCGTTC+AGG | 0.426968 | 7.3:-5352480 | MS.gene072688:intron |
| AACATCTGATGGTAGAAATC+AGG | 0.427976 | 7.3:-5335437 | MS.gene072688:CDS |
| CTCTATATCTGGTAGAGTTG+TGG | 0.428279 | 7.3:-5351187 | MS.gene072688:CDS |
| AATTGACACATCGAATCTAT+TGG | 0.432871 | 7.3:-5342699 | MS.gene072688:intron |
| ACTAGAAATGCAATTATAAG+AGG | 0.433487 | 7.3:+5335024 | None:intergenic |
| AAACTAAATTCATGTATTCC+GGG | 0.438085 | 7.3:+5342761 | None:intergenic |
| ATGTGGGCCCACTGAGATAC+AGG | 0.441245 | 7.3:-5335233 | MS.gene072688:CDS |
| TATTAGGTGGCTTTGACTCA+TGG | 0.446176 | 7.3:-5345597 | MS.gene072688:intron |
| TCGAGCTCAATTGCTTGTGC+TGG | 0.446973 | 7.3:+5337403 | None:intergenic |
| CAGTATCATACCTTCAAAAC+AGG | 0.447689 | 7.3:+5337834 | None:intergenic |
| GGAAGAAGTTCGAAATTGGC+AGG | 0.447899 | 7.3:+5335376 | None:intergenic |
| GGTTATCATTTAAAACAAGT+TGG | 0.450986 | 7.3:-5338047 | MS.gene072688:CDS |
| GTTGATGTGGTTCCCGGCGC+AGG | 0.451338 | 7.3:+5334837 | None:intergenic |
| ATGTTATTCCTGGAAAATAC+AGG | 0.453422 | 7.3:-5343294 | MS.gene072688:CDS |
| TCCTTTAGTTGTCAGAAGCT+TGG | 0.456340 | 7.3:-5338017 | MS.gene072688:CDS |
| TGTATCTCAGTGGGCCCACA+TGG | 0.456400 | 7.3:+5335235 | None:intergenic |
| CGGTTGGGTGTATATATTGA+AGG | 0.456654 | 7.3:-5340700 | MS.gene072688:CDS |
| GGACGCAGATAGAACATTCC+AGG | 0.457889 | 7.3:+5337855 | None:intergenic |
| GTTGTTGATATTTATCATGA+AGG | 0.462716 | 7.3:-5342483 | MS.gene072688:CDS |
| GAACTAGTGCCCTACTATAA+GGG | 0.463860 | 7.3:-5348650 | MS.gene072688:CDS |
| TGTAAGCTACTCGCGTGGCC+TGG | 0.464472 | 7.3:+5337353 | None:intergenic |
| ACCAAGCTTCTGACAACTAA+AGG | 0.466079 | 7.3:+5338016 | None:intergenic |
| GTCGCTAAAAGGGATGTTAT+GGG | 0.466092 | 7.3:-5335700 | MS.gene072688:CDS |
| GGTAGAGTTGTGGGAGCTGC+AGG | 0.467417 | 7.3:-5351177 | MS.gene072688:CDS |
| AGAAACAAACAGATGGAAAT+GGG | 0.467802 | 7.3:-5345551 | MS.gene072688:CDS |
| ATGGACCTGATGGGTGGTCA+TGG | 0.468727 | 7.3:-5351592 | MS.gene072688:CDS |
| TGCTATCAAAGTCGCTAAAA+GGG | 0.468824 | 7.3:-5335710 | MS.gene072688:CDS |
| ATAAGAGGAAATACTGGTGC+TGG | 0.469643 | 7.3:+5335039 | None:intergenic |
| AAAAGCTTAACTTTGTTCCT+CGG | 0.471593 | 7.3:-5342359 | MS.gene072688:CDS |
| GCCGTTTCATATGATCTTTG+TGG | 0.471905 | 7.3:-5345732 | MS.gene072688:CDS |
| ATCTGTGACTCTTGTCAAGC+AGG | 0.472527 | 7.3:-5343386 | MS.gene072688:CDS |
| CAAATCTAAGTGAGCTTGAT+GGG | 0.474246 | 7.3:+5335301 | None:intergenic |
| GAAACCGTAACAGATTCGTC+TGG | 0.476770 | 7.3:-5335772 | MS.gene072688:CDS |
| TTCGAACTTCTTCCAAGTGA+AGG | 0.478479 | 7.3:-5335367 | MS.gene072688:CDS |
| GAAATTCAACACATATATGT+TGG | 0.479231 | 7.3:+5342783 | None:intergenic |
| TTACTTACATGATGTTCTCT+GGG | 0.479658 | 7.3:+5340861 | None:intergenic |
| ATTCCCAGACGAATCTGTTA+CGG | 0.479748 | 7.3:+5335768 | None:intergenic |
| TATTCTGTTTGGGCCAATCC+AGG | 0.481303 | 7.3:-5342384 | MS.gene072688:CDS |
| TCAGTCTTGACTTCATCATC+AGG | 0.482782 | 7.3:-5351072 | MS.gene072688:CDS |
| AGGTTATTACAAGCTTGATC+AGG | 0.485867 | 7.3:-5346750 | MS.gene072688:intron |
| TCAAATCTAAGTGAGCTTGA+TGG | 0.486532 | 7.3:+5335300 | None:intergenic |
| GACCAGATCGAAGTTGTAGA+AGG | 0.489153 | 7.3:+5335325 | None:intergenic |
| AAATTCAACACATATATGTT+GGG | 0.489978 | 7.3:+5342784 | None:intergenic |
| TCTTTGTGGTTTAGTTAGGA+TGG | 0.491868 | 7.3:-5345718 | MS.gene072688:CDS |
| AAAGCTTAACTTTGTTCCTC+GGG | 0.492623 | 7.3:-5342358 | MS.gene072688:CDS |
| GGAATAAAATAGTACCCGTT+AGG | 0.496115 | 7.3:+5351768 | None:intergenic |
| GCTTCAAACCGTGGATGGAT+TGG | 0.500914 | 7.3:-5351814 | MS.gene072688:CDS |
| ATGAGTCCAGCAGCATTATC+GGG | 0.503144 | 7.3:+5344795 | None:intergenic |
| CAGTGGGTCTGTTGTTGCAC+AGG | 0.503400 | 7.3:-5349583 | MS.gene072688:intron |
| ACTGATGGCTCCTTTGTGGC+AGG | 0.503999 | 7.3:-5340568 | MS.gene072688:CDS |
| TCCATTAACTTTAATTACAA+AGG | 0.504858 | 7.3:+5351610 | None:intergenic |
| GGTTGGAACTGAGGATATCA+AGG | 0.505962 | 7.3:-5335544 | MS.gene072688:CDS |
| ATAGAAACAACTCAGTATCT+GGG | 0.506259 | 7.3:-5337911 | MS.gene072688:CDS |
| ATCGCAACATCAATATAAGA+TGG | 0.506969 | 7.3:+5344765 | None:intergenic |
| GATTGATGATCAGCTGAAGC+AGG | 0.507779 | 7.3:-5335211 | MS.gene072688:intron |
| AACCGTGGATGGATTGGTAA+AGG | 0.509918 | 7.3:-5351808 | MS.gene072688:CDS |
| TCAGTTCTGTTATCTTTGAG+TGG | 0.510093 | 7.3:-5337945 | MS.gene072688:CDS |
| AACAACTCAGTATCTGGGGC+TGG | 0.511207 | 7.3:-5337906 | MS.gene072688:CDS |
| GAACACAATGTGCTCCTAAC+GGG | 0.513649 | 7.3:-5351782 | MS.gene072688:CDS |
| AGTTGTCATGTTGAAGGAAA+CGG | 0.513703 | 7.3:-5335477 | MS.gene072688:CDS |
| GGATCCCATGACCACCCATC+AGG | 0.514368 | 7.3:+5351587 | None:intergenic |
| GCTGGAGACAGCAGTATCAC+TGG | 0.515052 | 7.3:-5340631 | MS.gene072688:CDS |
| GGAATTGGGCATTGGAAATG+GGG | 0.515072 | 7.3:-5349643 | MS.gene072688:CDS |
| TCGAACTTCTTCCAAGTGAA+GGG | 0.516414 | 7.3:-5335366 | MS.gene072688:CDS |
| GCTACTCCCGATAATGCTGC+TGG | 0.517169 | 7.3:-5344801 | MS.gene072688:CDS |
| GATATTTATCATGAAGGAGC+TGG | 0.518777 | 7.3:-5342477 | MS.gene072688:CDS |
| AGCTCAATTGCTTGTGCTGG+AGG | 0.519171 | 7.3:+5337406 | None:intergenic |
| CCATGGAAGATAATTGGTGC+TGG | 0.519866 | 7.3:-5343059 | MS.gene072688:CDS |
| ATACTGCTGTATTCCTTTGG+TGG | 0.521696 | 7.3:+5334753 | None:intergenic |
| CACCTTCTACAACTTCGATC+TGG | 0.522791 | 7.3:-5335327 | MS.gene072688:CDS |
| TTGTAGGTGGAATTGGGCAT+TGG | 0.524454 | 7.3:-5349651 | MS.gene072688:intron |
| AACAATTCCTTCGAAGTCCT+CGG | 0.524755 | 7.3:+5343005 | None:intergenic |
| GGTGTCAAGATCATAGTTGA+TGG | 0.525320 | 7.3:-5346800 | MS.gene072688:CDS |
| TGAAGGGCTTATCGAAGGGC+AGG | 0.529646 | 7.3:-5335350 | MS.gene072688:CDS |
| CTCAAAGATAACAGAACTGA+AGG | 0.529828 | 7.3:+5337948 | None:intergenic |
| AAGAAGTTCGAAATTGGCAG+GGG | 0.530875 | 7.3:+5335378 | None:intergenic |
| GTCCCTGGGTATAGTATCAG+TGG | 0.533507 | 7.3:-5349600 | MS.gene072688:CDS |
| GTTCATCTTTGGTGAAGTCC+AGG | 0.533922 | 7.3:-5352284 | MS.gene072688:CDS |
| ACCACAAAGATCATATGAAA+CGG | 0.534172 | 7.3:+5345731 | None:intergenic |
| GAAGCCCGGTCAGTGTCAAA+AGG | 0.534333 | 7.3:-5335805 | MS.gene072688:CDS |
| TGATATCATTGAGGTCGACT+TGG | 0.534767 | 7.3:-5335274 | MS.gene072688:CDS |
| GAAACGACCACCGGAACTGA+TGG | 0.535181 | 7.3:-5340583 | MS.gene072688:CDS |
| GTTGAGCTTCAAACCGTGGA+TGG | 0.535663 | 7.3:-5351819 | MS.gene072688:CDS |
| GGTGAAGTCCAGGAAACAAA+CGG | 0.538937 | 7.3:-5352274 | MS.gene072688:CDS |
| GTGACTCTTGTCAAGCAGGC+TGG | 0.539074 | 7.3:-5343382 | MS.gene072688:CDS |
| AGCTTCATAGATGTAAATGT+TGG | 0.539175 | 7.3:-5343030 | MS.gene072688:CDS |
| AACTCAGTATCTGGGGCTGG+AGG | 0.539419 | 7.3:-5337903 | MS.gene072688:CDS |
| ATCCTTTACCAATCCATCCA+CGG | 0.540905 | 7.3:+5351806 | None:intergenic |
| CTGAAACTCCTCCTTTGGGT+TGG | 0.542791 | 7.3:+5335830 | None:intergenic |
| TATCATGAAGGAGCTGGCGT+TGG | 0.546808 | 7.3:-5342471 | MS.gene072688:CDS |
| GAGGAGTTTCAGTTGAAGCC+CGG | 0.549081 | 7.3:-5335819 | MS.gene072688:CDS |
| TGATGGAAACGACATGGGAG+TGG | 0.550160 | 7.3:-5346825 | MS.gene072688:CDS |
| CACTATTTATCAGCATCCCC+AGG | 0.556200 | 7.3:-5334996 | MS.gene072688:intron |
| AAACAGAAATTCACTACGCT+CGG | 0.556546 | 7.3:+5343321 | None:intergenic |
| CCACAAAAGAAACAAACAGA+TGG | 0.556619 | 7.3:-5345558 | MS.gene072688:CDS |
| AGGTCTATTACTGACAATCA+AGG | 0.558543 | 7.3:-5346770 | MS.gene072688:CDS |
| CCAGCACCAATTATCTTCCA+TGG | 0.560254 | 7.3:+5343059 | None:intergenic |
| ATTTGAATCTGATATCATTG+AGG | 0.563041 | 7.3:-5335283 | MS.gene072688:CDS |
| CCTTCGATAAGCCCTTCACT+TGG | 0.563336 | 7.3:+5335355 | None:intergenic |
| ATTAAAGTTAATGGACCTGA+TGG | 0.563941 | 7.3:-5351602 | MS.gene072688:CDS |
| TGGACCTGATGGGTGGTCAT+GGG | 0.566074 | 7.3:-5351591 | MS.gene072688:CDS |
| TCCCTGGGTATAGTATCAGT+GGG | 0.570104 | 7.3:-5349599 | MS.gene072688:CDS |
| TATTTGTTTCATCTTTCCCG+TGG | 0.573213 | 7.3:+5342421 | None:intergenic |
| TACGATAGACATACCTGCGC+CGG | 0.573282 | 7.3:-5334850 | MS.gene072688:CDS |
| AGTCTCATTGCTACCACCAA+AGG | 0.573377 | 7.3:-5334766 | MS.gene072688:CDS |
| TTATAATGTTCAGGCTTCAA+AGG | 0.574139 | 7.3:-5340524 | MS.gene072688:intron |
| CCATATATTCTTGTATTCAG+AGG | 0.578070 | 7.3:-5349210 | MS.gene072688:CDS |
| TTCTGACAACTAAAGGAATG+AGG | 0.578856 | 7.3:+5338023 | None:intergenic |
| AGGCAATGCATCATGTAAGC+CGG | 0.579548 | 7.3:+5342515 | None:intergenic |
| GCTGATTCCATCTATGGCTG+CGG | 0.580408 | 7.3:-5352494 | MS.gene072688:CDS |
| GTGGGACTTGAGTATGGCCA+TGG | 0.580898 | 7.3:+5342440 | None:intergenic |
| CCAAGTGAAGGGCTTATCGA+AGG | 0.581387 | 7.3:-5335355 | MS.gene072688:CDS |
| AAGCAATTGAGCTCGAATCA+GGG | 0.581839 | 7.3:-5337396 | MS.gene072688:CDS |
| GAAGAAGTTCGAAATTGGCA+GGG | 0.582032 | 7.3:+5335377 | None:intergenic |
| TTGTGAGGAATAGTAAACAT+AGG | 0.582720 | 7.3:+5352540 | None:intergenic |
| CTGATATGAACACCAGAAAG+AGG | 0.582789 | 7.3:+5340664 | None:intergenic |
| CTGTTATCTGGCCAACCCAA+AGG | 0.584972 | 7.3:-5335841 | MS.gene072688:CDS |
| CCTGTGGTAGTTGACAATCA+AGG | 0.585283 | 7.3:-5351364 | MS.gene072688:CDS |
| TCCTGGAAAATACAGGCTTG+AGG | 0.585866 | 7.3:-5343287 | MS.gene072688:intron |
| ATGTTTCCAGGTTGGAACTG+AGG | 0.588059 | 7.3:-5335553 | MS.gene072688:intron |
| CATCAATCCTGTATCTCAGT+GGG | 0.588309 | 7.3:+5335226 | None:intergenic |
| TGAGCTTCGTAAACATCTGA+TGG | 0.589751 | 7.3:-5335448 | MS.gene072688:CDS |
| ATGCATCATGTAAGCCGGAA+AGG | 0.590807 | 7.3:+5342520 | None:intergenic |
| GATTCCATCTATGGCTGCGG+TGG | 0.592582 | 7.3:-5352491 | MS.gene072688:CDS |
| AGAACACAATGTGCTCCTAA+CGG | 0.592633 | 7.3:-5351783 | MS.gene072688:CDS |
| TGCTTCTATGGTATAGTGTG+TGG | 0.593669 | 7.3:+5345988 | None:intergenic |
| ATTGAATGCGAACTTTCCAT+CGG | 0.594509 | 7.3:+5349106 | None:intergenic |
| ACAAGAGTCACAGATACAGA+TGG | 0.594583 | 7.3:+5343394 | None:intergenic |
| ACTTTGTTCCTCGGGACTCG+AGG | 0.595140 | 7.3:-5342350 | MS.gene072688:intron |
| CCTTGATTGTCAACTACCAC+AGG | 0.598295 | 7.3:+5351364 | None:intergenic |
| AGTATCACTGGACTTAAAAG+TGG | 0.598637 | 7.3:-5340619 | MS.gene072688:CDS |
| AGAGTTGTGGGAGCTGCAGG+CGG | 0.599360 | 7.3:-5351174 | MS.gene072688:CDS |
| ACTCAGTATCTGGGGCTGGA+GGG | 0.601748 | 7.3:-5337902 | MS.gene072688:CDS |
| GGTCCTCTGTATGATGATGT+TGG | 0.602538 | 7.3:-5340547 | MS.gene072688:CDS |
| CTAATACTTGAAACGACCAC+CGG | 0.604363 | 7.3:-5340592 | MS.gene072688:CDS |
| GTGGTCATGGGATCCTGAGA+AGG | 0.604450 | 7.3:-5351579 | MS.gene072688:intron |
| GTTACATAAATCAACCAGAT+GGG | 0.605567 | 7.3:-5342930 | MS.gene072688:CDS |
| ACGATAGACATACCTGCGCC+GGG | 0.605634 | 7.3:-5334849 | MS.gene072688:CDS |
| GGTTACATAAATCAACCAGA+TGG | 0.607485 | 7.3:-5342931 | MS.gene072688:CDS |
| TTCCATGGTCACTGATTCGG+GGG | 0.607686 | 7.3:+5343074 | None:intergenic |
| CCCAACCGACAAGAAAATGT+AGG | 0.607780 | 7.3:+5340715 | None:intergenic |
| GCATTCAATTCAATACCTTG+TGG | 0.608043 | 7.3:-5349092 | MS.gene072688:intron |
| CACGCTGTATCAGATGCCGA+TGG | 0.609383 | 7.3:-5349122 | MS.gene072688:CDS |
| AAACCGTAACAGATTCGTCT+GGG | 0.609620 | 7.3:-5335771 | MS.gene072688:CDS |
| TGGAAACGACATGGGAGTGG+AGG | 0.611254 | 7.3:-5346822 | MS.gene072688:CDS |
| CTCAGATCGGAAATGTCGAT+CGG | 0.614098 | 7.3:-5352572 | None:intergenic |
| GGAAACGACATGGGAGTGGA+GGG | 0.615099 | 7.3:-5346821 | MS.gene072688:CDS |
| CTTATCTGTATAGGTTCCTG+TGG | 0.615542 | 7.3:-5351380 | MS.gene072688:intron |
| AGATGTAAATGTTGGAGCCG+AGG | 0.616032 | 7.3:-5343022 | MS.gene072688:CDS |
| TCATGTTGAAGGAAACGGTA+CGG | 0.617690 | 7.3:-5335472 | MS.gene072688:CDS |
| TGGCCATACTCAAGTCCCAC+GGG | 0.618469 | 7.3:-5342437 | MS.gene072688:CDS |
| TGTAGTTGATGGAAACGACA+TGG | 0.619360 | 7.3:-5346831 | MS.gene072688:CDS |
| GTATCTCAGTGGGCCCACAT+GGG | 0.619772 | 7.3:+5335236 | None:intergenic |
| CTGAAATTGAATAAGTTGTG+AGG | 0.620052 | 7.3:+5352525 | None:intergenic |
| ATTTGTTTCATCTTTCCCGT+GGG | 0.620563 | 7.3:+5342422 | None:intergenic |
| TCATAGTTGATGGTCATGAA+AGG | 0.623919 | 7.3:-5346790 | MS.gene072688:CDS |
| CAAGTGAAGGGCTTATCGAA+GGG | 0.624792 | 7.3:-5335354 | MS.gene072688:CDS |
| CTTCCATGGTCACTGATTCG+GGG | 0.625526 | 7.3:+5343073 | None:intergenic |
| TGAAGTTAAAGGTTCAACAC+AGG | 0.625903 | 7.3:-5349816 | MS.gene072688:intron |
| TCCGAGGTAGAATGTTTGCA+AGG | 0.626426 | 7.3:-5349182 | MS.gene072688:CDS |
| CATGGAAGATAATTGGTGCT+GGG | 0.626700 | 7.3:-5343058 | MS.gene072688:CDS |
| GTTGGAACTGAGGATATCAA+GGG | 0.626948 | 7.3:-5335543 | MS.gene072688:CDS |
| GTTGGAGCCGAGGACTTCGA+AGG | 0.629183 | 7.3:-5343012 | MS.gene072688:CDS |
| TTAAAGTTAATGGACCTGAT+GGG | 0.630255 | 7.3:-5351601 | MS.gene072688:CDS |
| AGCAATTGAGCTCGAATCAG+GGG | 0.632098 | 7.3:-5337395 | MS.gene072688:CDS |
| GTTGATGCTTAACATTAACT+GGG | 0.634397 | 7.3:+5348591 | None:intergenic |
| ACCTTGCAAACATTCTACCT+CGG | 0.635423 | 7.3:+5349181 | None:intergenic |
| GTAACCATCAACATCATGAG+TGG | 0.639513 | 7.3:+5342948 | None:intergenic |
| ACCCACTGATACTATACCCA+GGG | 0.642433 | 7.3:+5349598 | None:intergenic |
| GAAAATTCAACATTCAACAA+TGG | 0.642979 | 7.3:+5344735 | None:intergenic |
| GCTGACAAGCGATATTCACC+AGG | 0.644183 | 7.3:+5344831 | None:intergenic |
| CCGTGGTGCTGTAGTCTGCA+AGG | 0.644204 | 7.3:-5343428 | MS.gene072688:CDS |
| AAAGGAGCCATCAGTTCCGG+TGG | 0.646213 | 7.3:+5340576 | None:intergenic |
| GACCCACTGATACTATACCC+AGG | 0.649163 | 7.3:+5349597 | None:intergenic |
| TAGAAACAACTCAGTATCTG+GGG | 0.651855 | 7.3:-5337910 | MS.gene072688:CDS |
| CAGAGAGCTACTTCTTGTCG+TGG | 0.655387 | 7.3:+5349146 | None:intergenic |
| CACACTATACCATAGAAGCA+AGG | 0.657779 | 7.3:-5345985 | MS.gene072688:CDS |
| TTATCTGGCCAACCCAAAGG+AGG | 0.657923 | 7.3:-5335838 | MS.gene072688:CDS |
| TAGGCTTTGGTCAATGTCCG+TGG | 0.660231 | 7.3:-5343445 | MS.gene072688:CDS |
| TGGCGTTGGTGATAATGCCA+TGG | 0.660482 | 7.3:-5342457 | MS.gene072688:CDS |
| ATGGCCATACTCAAGTCCCA+CGG | 0.662322 | 7.3:-5342438 | MS.gene072688:CDS |
| GTAGGTTGAGCTTCAAACCG+TGG | 0.663440 | 7.3:-5351823 | MS.gene072688:intron |
| GTAGTTGATGGAAACGACAT+GGG | 0.665582 | 7.3:-5346830 | MS.gene072688:CDS |
| AAGTTAATGGACCTGATGGG+TGG | 0.666461 | 7.3:-5351598 | MS.gene072688:CDS |
| GATGACACAAGATCGCCAGA+AGG | 0.666773 | 7.3:+5351093 | None:intergenic |
| TTAGTTAGGATGGTTAGTAG+CGG | 0.666821 | 7.3:-5345708 | MS.gene072688:CDS |
| TAGTAGCGGTCAGAAAGCAA+CGG | 0.675411 | 7.3:-5345694 | MS.gene072688:intron |
| CAACTTCAAGAAAAGATGCG+AGG | 0.676910 | 7.3:-5334818 | MS.gene072688:CDS |
| CAGAAATTCACTACGCTCGG+AGG | 0.677987 | 7.3:+5343324 | None:intergenic |
| TCTGGGAATTATCGTCTGAG+AGG | 0.678057 | 7.3:-5335754 | MS.gene072688:CDS |
| GTATTCAGAGGATGTGTCCG+AGG | 0.678153 | 7.3:-5349198 | MS.gene072688:CDS |
| TCATCAATCCTGTATCTCAG+TGG | 0.679879 | 7.3:+5335225 | None:intergenic |
| ATACAGAGGACCTGCCACAA+AGG | 0.685844 | 7.3:+5340558 | None:intergenic |
| ATATGAACACCAGAAAGAGG+AGG | 0.692528 | 7.3:+5340667 | None:intergenic |
| AAACCTGTAAGCTACTCGCG+TGG | 0.699670 | 7.3:+5337348 | None:intergenic |
| AGAAGTTCGAAATTGGCAGG+GGG | 0.705475 | 7.3:+5335379 | None:intergenic |
| CCTTGCAGACTACAGCACCA+CGG | 0.708504 | 7.3:+5343428 | None:intergenic |
| TAACCAACATCATCATACAG+AGG | 0.720625 | 7.3:+5340544 | None:intergenic |
| AAAATGTACCTCGAGTCCCG+AGG | 0.736060 | 7.3:+5342342 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 5334738 | 5352582 | 5334738 | ID=MS.gene072688 |
| chr7.3 | mRNA | 5334738 | 5352582 | 5334738 | ID=MS.gene072688.t1;Parent=MS.gene072688 |
| chr7.3 | exon | 5352481 | 5352582 | 5352481 | ID=MS.gene072688.t1.exon1;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5352481 | 5352582 | 5352481 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5352245 | 5352310 | 5352245 | ID=MS.gene072688.t1.exon2;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5352245 | 5352310 | 5352245 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5351755 | 5351841 | 5351755 | ID=MS.gene072688.t1.exon3;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5351755 | 5351841 | 5351755 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5351580 | 5351636 | 5351580 | ID=MS.gene072688.t1.exon4;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5351580 | 5351636 | 5351580 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5351325 | 5351389 | 5351325 | ID=MS.gene072688.t1.exon5;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5351325 | 5351389 | 5351325 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5351043 | 5351212 | 5351043 | ID=MS.gene072688.t1.exon6;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5351043 | 5351212 | 5351043 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5349817 | 5349878 | 5349817 | ID=MS.gene072688.t1.exon7;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5349817 | 5349878 | 5349817 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5349584 | 5349667 | 5349584 | ID=MS.gene072688.t1.exon8;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5349584 | 5349667 | 5349584 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5349093 | 5349252 | 5349093 | ID=MS.gene072688.t1.exon9;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5349093 | 5349252 | 5349093 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5348565 | 5348680 | 5348565 | ID=MS.gene072688.t1.exon10;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5348565 | 5348680 | 5348565 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5346751 | 5346879 | 5346751 | ID=MS.gene072688.t1.exon11;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5346751 | 5346879 | 5346751 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5345946 | 5346017 | 5345946 | ID=MS.gene072688.t1.exon12;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5345946 | 5346017 | 5345946 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5345695 | 5345790 | 5345695 | ID=MS.gene072688.t1.exon13;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5345695 | 5345790 | 5345695 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5345536 | 5345613 | 5345536 | ID=MS.gene072688.t1.exon14;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5345536 | 5345613 | 5345536 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5344731 | 5344859 | 5344731 | ID=MS.gene072688.t1.exon15;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5344731 | 5344859 | 5344731 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5343288 | 5343464 | 5343288 | ID=MS.gene072688.t1.exon16;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5343288 | 5343464 | 5343288 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5342906 | 5343109 | 5342906 | ID=MS.gene072688.t1.exon17;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5342906 | 5343109 | 5342906 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5342700 | 5342813 | 5342700 | ID=MS.gene072688.t1.exon18;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5342700 | 5342813 | 5342700 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5342351 | 5342592 | 5342351 | ID=MS.gene072688.t1.exon19;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5342351 | 5342592 | 5342351 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5340869 | 5340914 | 5340869 | ID=MS.gene072688.t1.exon20;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5340869 | 5340914 | 5340869 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5340525 | 5340773 | 5340525 | ID=MS.gene072688.t1.exon21;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5340525 | 5340773 | 5340525 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5337845 | 5338072 | 5337845 | ID=MS.gene072688.t1.exon22;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5337845 | 5338072 | 5337845 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5337352 | 5337443 | 5337352 | ID=MS.gene072688.t1.exon23;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5337352 | 5337443 | 5337352 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5335654 | 5335882 | 5335654 | ID=MS.gene072688.t1.exon24;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5335654 | 5335882 | 5335654 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5335212 | 5335565 | 5335212 | ID=MS.gene072688.t1.exon25;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5335212 | 5335565 | 5335212 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5334997 | 5335070 | 5334997 | ID=MS.gene072688.t1.exon26;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5334997 | 5335070 | 5334997 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| chr7.3 | exon | 5334738 | 5334873 | 5334738 | ID=MS.gene072688.t1.exon27;Parent=MS.gene072688.t1 |
| chr7.3 | CDS | 5334738 | 5334873 | 5334738 | ID=cds.MS.gene072688.t1;Parent=MS.gene072688.t1 |
| Gene Sequence |
| Protein sequence |
