Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07068.t1 | XP_003625987.2 | 97.8 | 1172 | 25 | 1 | 1 | 1171 | 1 | 1172 | 0.00E+00 | 2299.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07068.t1 | Q6GQT9 | 31.1 | 1090 | 638 | 29 | 6 | 1034 | 8 | 1045 | 7.8e-145 | 516.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07068.t1 | G7KTM5 | 97.8 | 1172 | 25 | 1 | 1 | 1171 | 1 | 1172 | 0.0e+00 | 2299.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058827 | MS.gene07068 | 0.807061 | 6.07E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07068 | MS.gene03874 | PPI |
| MS.gene044787 | MS.gene07068 | PPI |
| MS.gene88211 | MS.gene07068 | PPI |
| MS.gene07068 | MS.gene66726 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07068.t1 | MTR_7g109730 | 97.782 | 1172 | 25 | 1 | 1 | 1171 | 1 | 1172 | 0.0 | 2343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07068.t1 | AT3G62360 | 64.914 | 1160 | 394 | 6 | 8 | 1161 | 11 | 1163 | 0.0 | 1562 |
| MS.gene07068.t1 | AT3G62360 | 63.277 | 1190 | 394 | 7 | 8 | 1161 | 11 | 1193 | 0.0 | 1547 |
Find 283 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGTCTCGCCTCCTCTTTC+TGG | 0.156683 | 7.2:+5922475 | MS.gene07068:CDS |
| TCCTTTGTAATTAAAGTTAA+TGG | 0.170602 | 7.2:+5910253 | MS.gene07068:CDS |
| TGTTGATGTTTAACATTAAC+TGG | 0.183876 | 7.2:-5914783 | None:intergenic |
| ATTGACTCATGTGTCTTCTT+TGG | 0.185010 | 7.2:+5920596 | MS.gene07068:CDS |
| TCTTCTATTGAAGCCATATT+TGG | 0.188138 | 7.2:-5917583 | None:intergenic |
| CTCTTTCTGGTGTTCATATC+AGG | 0.197336 | 7.2:+5922488 | MS.gene07068:CDS |
| GCATTACAAGTTCAAGAAAT+TGG | 0.201593 | 7.2:+5917388 | MS.gene07068:CDS |
| CTTGAAGTTGATGTGGTTCC+CGG | 0.219229 | 7.2:-5928071 | None:intergenic |
| GTTATTCTTGTAGGTGGAAT+TGG | 0.221904 | 7.2:+5913716 | MS.gene07068:intron |
| TTTGGCATCCGTTTGTTTCC+TGG | 0.227971 | 7.2:-5909608 | None:intergenic |
| ATGCTTCTTCCTTGCTTCTA+TGG | 0.234325 | 7.2:-5917369 | None:intergenic |
| TATAGAAACAACTCAGTATC+TGG | 0.258710 | 7.2:+5924599 | MS.gene07068:CDS |
| TTCAACTGAAACTCCTCCTT+TGG | 0.261974 | 7.2:-5927077 | None:intergenic |
| TGCTCAGGTATTGCCAAATA+TGG | 0.266920 | 7.2:+5917570 | MS.gene07068:intron |
| GGACAAATAAATGTCCTTTC+CGG | 0.267562 | 7.2:+5920799 | MS.gene07068:CDS |
| GCTTCTGCTGATTCCATCTA+TGG | 0.268002 | 7.2:+5909372 | MS.gene07068:CDS |
| GTTACTTACATGATGTTCTC+TGG | 0.268353 | 7.2:-5922290 | None:intergenic |
| GGAGAAAAGCATCTTATTAA+AGG | 0.271049 | 7.2:+5920778 | MS.gene07068:CDS |
| AAAACTAAATTCATGTATTC+CGG | 0.272345 | 7.2:-5920573 | None:intergenic |
| TCTTCCATGGTCACTGATTC+GGG | 0.276213 | 7.2:-5920261 | None:intergenic |
| ATGCTATCAAAGTCGCTAAA+AGG | 0.278501 | 7.2:+5927191 | MS.gene07068:CDS |
| TTGACTCATGTGTCTTCTTT+GGG | 0.279133 | 7.2:+5920597 | MS.gene07068:CDS |
| GGCTTAGTCACTCTGTTATC+TGG | 0.280904 | 7.2:+5927049 | MS.gene07068:CDS |
| ATAAATTCTTACAGTGCTAT+TGG | 0.282828 | 7.2:+5927028 | MS.gene07068:intron |
| TTCCAGGGAAACCCTATATT+AGG | 0.283328 | 7.2:+5914138 | MS.gene07068:intron |
| CTGTCTTTGAGTATTCTGTT+TGG | 0.284849 | 7.2:+5920938 | MS.gene07068:CDS |
| CAAGAAATTGGAGAATTATA+TGG | 0.286191 | 7.2:+5917400 | MS.gene07068:CDS |
| ATGATCTTTGTGGTTTAGTT+AGG | 0.292647 | 7.2:+5917623 | MS.gene07068:CDS |
| CAGTGACCATGGAAGATAAT+TGG | 0.300405 | 7.2:+5920268 | MS.gene07068:CDS |
| TGTTAACTGTTACAGGTAAC+TGG | 0.308644 | 7.2:+5916456 | MS.gene07068:intron |
| GAAACAAACGGATGCCAAAT+TGG | 0.314612 | 7.2:+5909612 | MS.gene07068:CDS |
| TGGAATTGGGCTTTGGAAAT+GGG | 0.315488 | 7.2:+5913730 | MS.gene07068:CDS |
| ATCTTCCATGGTCACTGATT+CGG | 0.315998 | 7.2:-5920262 | None:intergenic |
| CTCTGTAGGTTCTCTATATC+TGG | 0.316967 | 7.2:+5910666 | MS.gene07068:intron |
| TTTAATGTCTAGGTTCTTCC+TGG | 0.320833 | 7.2:+5918496 | MS.gene07068:intron |
| TGTCTTTGAGTATTCTGTTT+GGG | 0.321332 | 7.2:+5920939 | MS.gene07068:CDS |
| TTGTAGCCCATCCATCTAAA+AGG | 0.322595 | 7.2:+5920757 | MS.gene07068:intron |
| GTGGAATTGGGCTTTGGAAA+TGG | 0.325253 | 7.2:+5913729 | MS.gene07068:CDS |
| AATATATGGACTCCTAATAT+AGG | 0.326208 | 7.2:-5914150 | None:intergenic |
| GACATGTGAATAATCCAATT+TGG | 0.330019 | 7.2:-5909626 | None:intergenic |
| TGAACTAGTGCCCTACTATA+AGG | 0.331374 | 7.2:+5914722 | MS.gene07068:CDS |
| CCTCTGAATACAAGAATATA+TGG | 0.332768 | 7.2:-5914164 | None:intergenic |
| AGTCGCTAAAAGGGATGTTA+TGG | 0.333306 | 7.2:+5927201 | MS.gene07068:CDS |
| AACTGAGGATATCAAGGGTT+TGG | 0.335214 | 7.2:+5927364 | MS.gene07068:CDS |
| ACTTGGAAGAAGTTCGAAAT+TGG | 0.340693 | 7.2:-5927530 | None:intergenic |
| TCCAGATTCTCTTTCTGTTA+AGG | 0.346413 | 7.2:+5927249 | MS.gene07068:CDS |
| GATATGAAAGTTGAAGTTAA+AGG | 0.347337 | 7.2:+5913547 | MS.gene07068:CDS |
| ACATTAACTGGGACACTAGA+TGG | 0.348222 | 7.2:-5914771 | None:intergenic |
| CAAGCAATTGAGCTCGAATC+AGG | 0.350823 | 7.2:+5925114 | MS.gene07068:CDS |
| CATGAGTCCAGCAGCATTAT+CGG | 0.352438 | 7.2:-5918551 | None:intergenic |
| GTATTTGATAGTTTGTTTCC+TGG | 0.354735 | 7.2:+5924638 | MS.gene07068:CDS |
| ATCGCAGGCGAGTTCATCTT+TGG | 0.358289 | 7.2:+5909579 | MS.gene07068:intron |
| AGGCCACGCGAGTAGCTTAC+AGG | 0.361880 | 7.2:+5925160 | MS.gene07068:CDS |
| AAGAAACAAACAGATGGAAA+TGG | 0.362628 | 7.2:+5917793 | MS.gene07068:CDS |
| CATATATGTGTTGAATTTCC+CGG | 0.363064 | 7.2:+5920554 | MS.gene07068:CDS |
| TTATTCTTGTAGGTGGAATT+GGG | 0.367599 | 7.2:+5913717 | MS.gene07068:intron |
| TTTCCCGTGGGACTTGAGTA+TGG | 0.368060 | 7.2:-5920899 | None:intergenic |
| CAACTTACAATTGTCATATC+TGG | 0.370044 | 7.2:-5927407 | None:intergenic |
| GTTGAACTATTGTCTCCTTC+TGG | 0.372002 | 7.2:+5910756 | MS.gene07068:CDS |
| TTATCTTTGAGTGGTGATAA+TGG | 0.375443 | 7.2:+5924575 | MS.gene07068:CDS |
| CAACTGTGAATTTGAAGATT+CGG | 0.376310 | 7.2:+5920427 | MS.gene07068:CDS |
| TTGATAGCATAGACAGTATC+AGG | 0.378590 | 7.2:-5927178 | None:intergenic |
| TCAACTGAAACTCCTCCTTT+GGG | 0.387705 | 7.2:-5927076 | None:intergenic |
| TGATGTTGGTTATAATGTTC+AGG | 0.391109 | 7.2:+5922618 | MS.gene07068:CDS |
| GTTATACTGCTGTATTCCTT+TGG | 0.392064 | 7.2:-5928152 | None:intergenic |
| CACAAAGGAGCCATCAGTTC+CGG | 0.394925 | 7.2:-5922578 | None:intergenic |
| ACCTTAACAGAAAGAGAATC+TGG | 0.399447 | 7.2:-5927250 | None:intergenic |
| TCTATATCTGGTAGAGTTGT+GGG | 0.404597 | 7.2:+5910678 | MS.gene07068:CDS |
| TTGTTTACAAATGTAATTCC+AGG | 0.405641 | 7.2:+5910822 | MS.gene07068:CDS |
| GCAATTATAAGAGGAAATAC+TGG | 0.406420 | 7.2:-5927869 | None:intergenic |
| AAATGGGAATTTCTGCTTTG+AGG | 0.407460 | 7.2:+5917810 | MS.gene07068:CDS |
| GAATCCACCGCAGCCATAGA+TGG | 0.409957 | 7.2:-5909385 | None:intergenic |
| AAATTCACAGTTGACCCATC+TGG | 0.413826 | 7.2:-5920417 | None:intergenic |
| TGTTTGCAAGGTTCTGCTAA+TGG | 0.419182 | 7.2:+5914204 | MS.gene07068:CDS |
| ATCTCCACTCATGATGTTGA+TGG | 0.419839 | 7.2:+5920381 | MS.gene07068:CDS |
| GTTATCATTTAAAACAAGTT+GGG | 0.421416 | 7.2:+5924465 | MS.gene07068:CDS |
| TTGTAGGTGGAATTGGGCTT+TGG | 0.422980 | 7.2:+5913723 | MS.gene07068:intron |
| ATTGTAAGTTGTCATGTTGA+AGG | 0.424855 | 7.2:+5927419 | MS.gene07068:CDS |
| ATATATGGACTCCTAATATA+GGG | 0.425298 | 7.2:-5914149 | None:intergenic |
| CGGAACTGATGGCTCCTTTG+TGG | 0.426816 | 7.2:+5922579 | MS.gene07068:CDS |
| AACTGTGAATTTGAAGATTC+GGG | 0.426894 | 7.2:+5920428 | MS.gene07068:CDS |
| TGGCTGCGGTGGATTCGTTC+AGG | 0.426968 | 7.2:+5909392 | MS.gene07068:CDS |
| AACATCTGATGGTAGAAATC+AGG | 0.427976 | 7.2:+5927465 | MS.gene07068:CDS |
| CTCTATATCTGGTAGAGTTG+TGG | 0.428279 | 7.2:+5910677 | MS.gene07068:CDS |
| AATTGACACATCGAATCTAT+TGG | 0.432871 | 7.2:+5920634 | MS.gene07068:CDS |
| ACTAGAAATGCAATTATAAG+AGG | 0.433487 | 7.2:-5927878 | None:intergenic |
| AAACTAAATTCATGTATTCC+GGG | 0.438085 | 7.2:-5920572 | None:intergenic |
| ATGTGGGCCCACTGAGATAC+AGG | 0.441245 | 7.2:+5927669 | MS.gene07068:CDS |
| TATTAGGTGGCTTTGACTCA+TGG | 0.446176 | 7.2:+5917748 | MS.gene07068:intron |
| AAGAGATAACAAACCTTCTC+AGG | 0.446642 | 7.2:-5910298 | None:intergenic |
| CAGTATCGTACCTTCAAAAC+AGG | 0.446959 | 7.2:-5924677 | None:intergenic |
| TCGAGCTCAATTGCTTGTGC+TGG | 0.446973 | 7.2:-5925108 | None:intergenic |
| GGAAGAAGTTCGAAATTGGC+AGG | 0.447899 | 7.2:-5927526 | None:intergenic |
| GGTTATCATTTAAAACAAGT+TGG | 0.450986 | 7.2:+5924464 | MS.gene07068:CDS |
| GTTGATGTGGTTCCCGGCGC+AGG | 0.451338 | 7.2:-5928065 | None:intergenic |
| ATGTTATTCCTGGAAAATAC+AGG | 0.453422 | 7.2:+5920039 | MS.gene07068:CDS |
| TCCTTTAGTTGTCAGAAGCT+TGG | 0.456340 | 7.2:+5924494 | MS.gene07068:CDS |
| TGTATCTCAGTGGGCCCACA+TGG | 0.456400 | 7.2:-5927667 | None:intergenic |
| CGGTTGGGTGTATATATTGA+AGG | 0.456654 | 7.2:+5922451 | MS.gene07068:CDS |
| GGACGCAGATAGAACATTCC+AGG | 0.457889 | 7.2:-5924656 | None:intergenic |
| GTTGTTGATATTTATCATGA+AGG | 0.462716 | 7.2:+5920850 | MS.gene07068:CDS |
| GAACTAGTGCCCTACTATAA+GGG | 0.463860 | 7.2:+5914723 | MS.gene07068:CDS |
| TGTAAGCTACTCGCGTGGCC+TGG | 0.464472 | 7.2:-5925158 | None:intergenic |
| ACCAAGCTTCTGACAACTAA+AGG | 0.466079 | 7.2:-5924495 | None:intergenic |
| GTCGCTAAAAGGGATGTTAT+GGG | 0.466092 | 7.2:+5927202 | MS.gene07068:CDS |
| ATATGAATATCAAACTTGCC+TGG | 0.466487 | 7.2:-5927924 | None:intergenic |
| GGTAGAGTTGTGGGAGCTGC+AGG | 0.467417 | 7.2:+5910687 | MS.gene07068:CDS |
| AGAAACAAACAGATGGAAAT+GGG | 0.467802 | 7.2:+5917794 | MS.gene07068:CDS |
| ATGGACCTGATGGGTGGTCA+TGG | 0.468727 | 7.2:+5910272 | MS.gene07068:CDS |
| TGCTATCAAAGTCGCTAAAA+GGG | 0.468824 | 7.2:+5927192 | MS.gene07068:CDS |
| ATAAGAGGAAATACTGGTGC+TGG | 0.469643 | 7.2:-5927863 | None:intergenic |
| GCCGTTTCATATGATCTTTG+TGG | 0.471905 | 7.2:+5917613 | MS.gene07068:CDS |
| ATCTGTGACTCTTGTCAAGC+AGG | 0.472527 | 7.2:+5919947 | MS.gene07068:CDS |
| CAAATCTAAGTGAGCTTGAT+GGG | 0.474246 | 7.2:-5927601 | None:intergenic |
| AAAAGCTTACCTTTGTTCCT+CGG | 0.476231 | 7.2:+5920974 | MS.gene07068:CDS |
| GAAACCGTAACAGATTCGTC+TGG | 0.476770 | 7.2:+5927130 | MS.gene07068:CDS |
| TTCGAACTTCTTCCAAGTGA+AGG | 0.478479 | 7.2:+5927535 | MS.gene07068:CDS |
| GAAATTCAACACATATATGT+TGG | 0.479231 | 7.2:-5920550 | None:intergenic |
| TTACTTACATGATGTTCTCT+GGG | 0.479658 | 7.2:-5922289 | None:intergenic |
| ATTCCCAGACGAATCTGTTA+CGG | 0.479748 | 7.2:-5927134 | None:intergenic |
| TATTCTGTTTGGGCCAATCC+AGG | 0.481303 | 7.2:+5920949 | MS.gene07068:CDS |
| AGGTTATTACAAGCTTGATC+AGG | 0.485867 | 7.2:+5916578 | MS.gene07068:CDS |
| TCAAATCTAAGTGAGCTTGA+TGG | 0.486532 | 7.2:-5927602 | None:intergenic |
| GACCAGATCGAAGTTGTAGA+AGG | 0.489153 | 7.2:-5927577 | None:intergenic |
| AAATTCAACACATATATGTT+GGG | 0.489978 | 7.2:-5920549 | None:intergenic |
| TATGAATATCAAACTTGCCT+GGG | 0.491308 | 7.2:-5927923 | None:intergenic |
| TCTTTGTGGTTTAGTTAGGA+TGG | 0.491868 | 7.2:+5917627 | MS.gene07068:CDS |
| AAAGCTTACCTTTGTTCCTC+GGG | 0.492249 | 7.2:+5920975 | MS.gene07068:CDS |
| GGAATTGGGCTTTGGAAATG+GGG | 0.493886 | 7.2:+5913731 | MS.gene07068:CDS |
| GGAATAAAATAGTACCCGTT+AGG | 0.496115 | 7.2:-5910083 | None:intergenic |
| GCTTCAAACCGTGGATGGAT+TGG | 0.500914 | 7.2:+5910037 | MS.gene07068:CDS |
| ATGAGTCCAGCAGCATTATC+GGG | 0.503144 | 7.2:-5918550 | None:intergenic |
| CAGTGGGTCTGTTGTTGCAC+AGG | 0.503400 | 7.2:+5913791 | MS.gene07068:CDS |
| ACTGATGGCTCCTTTGTGGC+AGG | 0.503999 | 7.2:+5922583 | MS.gene07068:CDS |
| TCCATTAACTTTAATTACAA+AGG | 0.504858 | 7.2:-5910254 | None:intergenic |
| GGTTGGAACTGAGGATATCA+AGG | 0.505962 | 7.2:+5927358 | MS.gene07068:intron |
| ATAGAAACAACTCAGTATCT+GGG | 0.506259 | 7.2:+5924600 | MS.gene07068:CDS |
| ATCGCAACATCAATATAAGA+TGG | 0.506969 | 7.2:-5918580 | None:intergenic |
| GATTGATGATCAGCTGAAGC+AGG | 0.507779 | 7.2:+5927691 | MS.gene07068:CDS |
| AACCGTGGATGGATTGGTAA+AGG | 0.509918 | 7.2:+5910043 | MS.gene07068:CDS |
| TCAGTTCTGTTATCTTTGAG+TGG | 0.510093 | 7.2:+5924566 | MS.gene07068:CDS |
| AACAACTCAGTATCTGGGGC+TGG | 0.511207 | 7.2:+5924605 | MS.gene07068:CDS |
| GAACACAATGTGCTCCTAAC+GGG | 0.513649 | 7.2:+5910069 | MS.gene07068:CDS |
| AGTTGTCATGTTGAAGGAAA+CGG | 0.513703 | 7.2:+5927425 | MS.gene07068:CDS |
| GGATCCCATGACCACCCATC+AGG | 0.514368 | 7.2:-5910277 | None:intergenic |
| GCTGGAGACAGCAGTATCAC+TGG | 0.515052 | 7.2:+5922520 | MS.gene07068:CDS |
| TCGAACTTCTTCCAAGTGAA+GGG | 0.516414 | 7.2:+5927536 | MS.gene07068:CDS |
| GCTACTCCCGATAATGCTGC+TGG | 0.517169 | 7.2:+5918544 | MS.gene07068:CDS |
| GATATTTATCATGAAGGAGC+TGG | 0.518777 | 7.2:+5920856 | MS.gene07068:CDS |
| AGCTCAATTGCTTGTGCTGG+AGG | 0.519171 | 7.2:-5925105 | None:intergenic |
| CCATGGAAGATAATTGGTGC+TGG | 0.519866 | 7.2:+5920274 | MS.gene07068:CDS |
| ATACTGCTGTATTCCTTTGG+TGG | 0.521696 | 7.2:-5928149 | None:intergenic |
| CACCTTCTACAACTTCGATC+TGG | 0.522791 | 7.2:+5927575 | MS.gene07068:CDS |
| AACAATTCCTTCGAAGTCCT+CGG | 0.524755 | 7.2:-5920328 | None:intergenic |
| GGTGTCAAGATCATAGTTGA+TGG | 0.525320 | 7.2:+5916528 | MS.gene07068:CDS |
| TGAAGGGCTTATCGAAGGGC+AGG | 0.529646 | 7.2:+5927552 | MS.gene07068:CDS |
| CTCAAAGATAACAGAACTGA+AGG | 0.529828 | 7.2:-5924563 | None:intergenic |
| AAGAAGTTCGAAATTGGCAG+GGG | 0.530875 | 7.2:-5927524 | None:intergenic |
| GTCCCTGGGTATAGTATCAG+TGG | 0.533507 | 7.2:+5913774 | MS.gene07068:CDS |
| GTTCATCTTTGGTGAAGTCC+AGG | 0.533922 | 7.2:+5909590 | MS.gene07068:CDS |
| ACCACAAAGATCATATGAAA+CGG | 0.534172 | 7.2:-5917614 | None:intergenic |
| TGATATCATTGAGGTCGACT+TGG | 0.534767 | 7.2:+5927628 | MS.gene07068:CDS |
| GAAACGACCACCGGAACTGA+TGG | 0.535181 | 7.2:+5922568 | MS.gene07068:CDS |
| GAAGCCCGCTCAGTGTCAAA+AGG | 0.535586 | 7.2:+5927097 | MS.gene07068:CDS |
| GTTGAGCTTCAAACCGTGGA+TGG | 0.535663 | 7.2:+5910032 | MS.gene07068:CDS |
| GGTGAAGTCCAGGAAACAAA+CGG | 0.538937 | 7.2:+5909600 | MS.gene07068:CDS |
| GTGACTCTTGTCAAGCAGGC+TGG | 0.539074 | 7.2:+5919951 | MS.gene07068:CDS |
| AGCTTCATAGATGTAAATGT+TGG | 0.539175 | 7.2:+5920303 | MS.gene07068:CDS |
| AACTCAGTATCTGGGGCTGG+AGG | 0.539419 | 7.2:+5924608 | MS.gene07068:CDS |
| ATCCTTTACCAATCCATCCA+CGG | 0.540905 | 7.2:-5910045 | None:intergenic |
| CTGAAACTCCTCCTTTGGGT+TGG | 0.542791 | 7.2:-5927072 | None:intergenic |
| TATCATGAAGGAGCTGGCGT+TGG | 0.546808 | 7.2:+5920862 | MS.gene07068:CDS |
| TGATGGAAACGACATGGGAG+TGG | 0.550160 | 7.2:+5916503 | MS.gene07068:CDS |
| CACTATTTATCAGCATCCCC+AGG | 0.550902 | 7.2:+5927906 | MS.gene07068:CDS |
| AAACAGAAATTCACTACGCT+CGG | 0.556546 | 7.2:-5920012 | None:intergenic |
| CCACAAAAGAAACAAACAGA+TGG | 0.556619 | 7.2:+5917787 | MS.gene07068:CDS |
| AGGTCTATTACTGACAATCA+AGG | 0.558543 | 7.2:+5916558 | MS.gene07068:CDS |
| CCAGCACCAATTATCTTCCA+TGG | 0.560254 | 7.2:-5920274 | None:intergenic |
| ATTTGAATCTGATATCATTG+AGG | 0.563041 | 7.2:+5927619 | MS.gene07068:CDS |
| CCTTCGATAAGCCCTTCACT+TGG | 0.563336 | 7.2:-5927547 | None:intergenic |
| CCTTTGTTCCTCGGGACTCG+AGG | 0.563826 | 7.2:+5920983 | MS.gene07068:CDS |
| ATTAAAGTTAATGGACCTGA+TGG | 0.563941 | 7.2:+5910262 | MS.gene07068:CDS |
| TGGACCTGATGGGTGGTCAT+GGG | 0.566074 | 7.2:+5910273 | MS.gene07068:CDS |
| TCCCTGGGTATAGTATCAGT+GGG | 0.570104 | 7.2:+5913775 | MS.gene07068:CDS |
| AAAGGAATACAGCAGTATAA+CGG | 0.571341 | 7.2:+5928154 | MS.gene07068:CDS |
| TATTTGTTTCATCTTTCCCG+TGG | 0.573213 | 7.2:-5920912 | None:intergenic |
| TACGATAGACATACCTGCGC+CGG | 0.573282 | 7.2:+5928052 | MS.gene07068:CDS |
| AGTCTCATTGCTACCACCAA+AGG | 0.573377 | 7.2:+5928136 | MS.gene07068:CDS |
| TTATAATGTTCAGGCTTCAA+AGG | 0.574139 | 7.2:+5922627 | MS.gene07068:CDS |
| CCTCGAGTCCCGAGGAACAA+AGG | 0.577692 | 7.2:-5920983 | None:intergenic |
| CCATATATTCTTGTATTCAG+AGG | 0.578070 | 7.2:+5914164 | MS.gene07068:CDS |
| TTCTGACAACTAAAGGAATG+AGG | 0.578856 | 7.2:-5924488 | None:intergenic |
| AGGCAATGCATCATGTAAGC+CGG | 0.579548 | 7.2:-5920818 | None:intergenic |
| GCTGATTCCATCTATGGCTG+CGG | 0.580408 | 7.2:+5909378 | MS.gene07068:CDS |
| GTGGGACTTGAGTATGGCCA+TGG | 0.580898 | 7.2:-5920893 | None:intergenic |
| CCAAGTGAAGGGCTTATCGA+AGG | 0.581387 | 7.2:+5927547 | MS.gene07068:CDS |
| AAGCAATTGAGCTCGAATCA+GGG | 0.581839 | 7.2:+5925115 | MS.gene07068:CDS |
| GAAGAAGTTCGAAATTGGCA+GGG | 0.582032 | 7.2:-5927525 | None:intergenic |
| TTGTGAGGAATAGTAAACAT+AGG | 0.582720 | 7.2:-5909332 | None:intergenic |
| CTGATATGAACACCAGAAAG+AGG | 0.582789 | 7.2:-5922487 | None:intergenic |
| CTGTTATCTGGCCAACCCAA+AGG | 0.584972 | 7.2:+5927061 | MS.gene07068:CDS |
| CCTGTGGTAGTTGACAATCA+AGG | 0.585283 | 7.2:+5910500 | MS.gene07068:CDS |
| TCCTGGAAAATACAGGCTTG+AGG | 0.585866 | 7.2:+5920046 | MS.gene07068:CDS |
| ATGTTTCCAGGTTGGAACTG+AGG | 0.588059 | 7.2:+5927349 | MS.gene07068:intron |
| CATCAATCCTGTATCTCAGT+GGG | 0.588309 | 7.2:-5927676 | None:intergenic |
| TGAGCTTCGTAAACATCTGA+TGG | 0.589751 | 7.2:+5927454 | MS.gene07068:CDS |
| ATGCATCATGTAAGCCGGAA+AGG | 0.590807 | 7.2:-5920813 | None:intergenic |
| GATTCCATCTATGGCTGCGG+TGG | 0.592582 | 7.2:+5909381 | MS.gene07068:CDS |
| AGAACACAATGTGCTCCTAA+CGG | 0.592633 | 7.2:+5910068 | MS.gene07068:CDS |
| TGCTTCTATGGTATAGTGTG+TGG | 0.593669 | 7.2:-5917357 | None:intergenic |
| ATTGAATGCGAACTTTCCAT+CGG | 0.594509 | 7.2:-5914268 | None:intergenic |
| ACAAGAGTCACAGATACAGA+TGG | 0.594583 | 7.2:-5919939 | None:intergenic |
| GAAAATTCAACGTTCAACAA+TGG | 0.594837 | 7.2:-5918610 | None:intergenic |
| CCTTGATTGTCAACTACCAC+AGG | 0.598295 | 7.2:-5910500 | None:intergenic |
| AGTATCACTGGACTTAAAAG+TGG | 0.598637 | 7.2:+5922532 | MS.gene07068:CDS |
| AGAGTTGTGGGAGCTGCAGG+CGG | 0.599360 | 7.2:+5910690 | MS.gene07068:CDS |
| ACTCAGTATCTGGGGCTGGA+GGG | 0.601748 | 7.2:+5924609 | MS.gene07068:CDS |
| GGTCCTCTGTATGATGATGT+TGG | 0.602538 | 7.2:+5922604 | MS.gene07068:CDS |
| CTAATACTTGAAACGACCAC+CGG | 0.604363 | 7.2:+5922559 | MS.gene07068:CDS |
| GTGGTCATGGGATCCTGAGA+AGG | 0.604450 | 7.2:+5910285 | MS.gene07068:CDS |
| GTTACATAAATCAACCAGAT+GGG | 0.605567 | 7.2:+5920403 | MS.gene07068:CDS |
| ACGATAGACATACCTGCGCC+GGG | 0.605634 | 7.2:+5928053 | MS.gene07068:CDS |
| GGTTACATAAATCAACCAGA+TGG | 0.607485 | 7.2:+5920402 | MS.gene07068:CDS |
| TTCCATGGTCACTGATTCGG+GGG | 0.607686 | 7.2:-5920259 | None:intergenic |
| CCCAACCGACAAGAAAATGT+AGG | 0.607780 | 7.2:-5922436 | None:intergenic |
| GTTGATGTTTAACATTAACT+GGG | 0.607862 | 7.2:-5914782 | None:intergenic |
| GCATTCAATTCAATACCTTG+TGG | 0.608043 | 7.2:+5914282 | MS.gene07068:CDS |
| CACGCTGTATCAGATGCCGA+TGG | 0.609383 | 7.2:+5914252 | MS.gene07068:CDS |
| AAACCGTAACAGATTCGTCT+GGG | 0.609620 | 7.2:+5927131 | MS.gene07068:CDS |
| TGGAAACGACATGGGAGTGG+AGG | 0.611254 | 7.2:+5916506 | MS.gene07068:CDS |
| CTCAGATCGGAAATGTCGAT+CGG | 0.614098 | 7.2:+5909300 | None:intergenic |
| GGAAACGACATGGGAGTGGA+GGG | 0.615099 | 7.2:+5916507 | MS.gene07068:CDS |
| CTTATCTGTATAGGTTCCTG+TGG | 0.615542 | 7.2:+5910484 | MS.gene07068:intron |
| AGATGTAAATGTTGGAGCCG+AGG | 0.616032 | 7.2:+5920311 | MS.gene07068:CDS |
| TCATGTTGAAGGAAACGGTA+CGG | 0.617690 | 7.2:+5927430 | MS.gene07068:CDS |
| TGGCCATACTCAAGTCCCAC+GGG | 0.618469 | 7.2:+5920896 | MS.gene07068:CDS |
| TGTAGTTGATGGAAACGACA+TGG | 0.619360 | 7.2:+5916497 | MS.gene07068:CDS |
| GTATCTCAGTGGGCCCACAT+GGG | 0.619772 | 7.2:-5927666 | None:intergenic |
| CTGAAATTGAATAAGTTGTG+AGG | 0.620052 | 7.2:-5909347 | None:intergenic |
| ATTTGTTTCATCTTTCCCGT+GGG | 0.620563 | 7.2:-5920911 | None:intergenic |
| TCATAGTTGATGGTCATGAA+AGG | 0.623919 | 7.2:+5916538 | MS.gene07068:CDS |
| CAAGTGAAGGGCTTATCGAA+GGG | 0.624792 | 7.2:+5927548 | MS.gene07068:CDS |
| CTTCCATGGTCACTGATTCG+GGG | 0.625526 | 7.2:-5920260 | None:intergenic |
| TGAAGTTAAAGGTTCAACAC+AGG | 0.625903 | 7.2:+5913558 | MS.gene07068:CDS |
| TCCGAGGTAGAATGTTTGCA+AGG | 0.626426 | 7.2:+5914192 | MS.gene07068:CDS |
| CATGGAAGATAATTGGTGCT+GGG | 0.626700 | 7.2:+5920275 | MS.gene07068:CDS |
| GTTGGAACTGAGGATATCAA+GGG | 0.626948 | 7.2:+5927359 | MS.gene07068:CDS |
| GTTGGAGCCGAGGACTTCGA+AGG | 0.629183 | 7.2:+5920321 | MS.gene07068:CDS |
| TTAAAGTTAATGGACCTGAT+GGG | 0.630255 | 7.2:+5910263 | MS.gene07068:CDS |
| AGCAATTGAGCTCGAATCAG+GGG | 0.632098 | 7.2:+5925116 | MS.gene07068:CDS |
| ACCTTGCAAACATTCTACCT+CGG | 0.635423 | 7.2:-5914193 | None:intergenic |
| GTAACCATCAACATCATGAG+TGG | 0.639513 | 7.2:-5920385 | None:intergenic |
| ACCCACTGATACTATACCCA+GGG | 0.642433 | 7.2:-5913776 | None:intergenic |
| GCTGACAAGCGATATTCACC+AGG | 0.644183 | 7.2:-5918514 | None:intergenic |
| CCGTGGTGCTGTAGTCTGCA+AGG | 0.644204 | 7.2:+5919905 | MS.gene07068:CDS |
| AAAGGAGCCATCAGTTCCGG+TGG | 0.646213 | 7.2:-5922575 | None:intergenic |
| GACCCACTGATACTATACCC+AGG | 0.649163 | 7.2:-5913777 | None:intergenic |
| TAGAAACAACTCAGTATCTG+GGG | 0.651855 | 7.2:+5924601 | MS.gene07068:CDS |
| ATGAATATCAAACTTGCCTG+GGG | 0.655268 | 7.2:-5927922 | None:intergenic |
| CAGAGAGCTACTTCTTGTCG+TGG | 0.655387 | 7.2:-5914228 | None:intergenic |
| CACACTATACCATAGAAGCA+AGG | 0.657779 | 7.2:+5917360 | MS.gene07068:CDS |
| TTATCTGGCCAACCCAAAGG+AGG | 0.657923 | 7.2:+5927064 | MS.gene07068:CDS |
| TAGGCTTTGGTCAATGTCCG+TGG | 0.660231 | 7.2:+5919888 | MS.gene07068:intron |
| TGGCGTTGGTGATAATGCCA+TGG | 0.660482 | 7.2:+5920876 | MS.gene07068:CDS |
| ATGGCCATACTCAAGTCCCA+CGG | 0.662322 | 7.2:+5920895 | MS.gene07068:CDS |
| GTAGGTTGAGCTTCAAACCG+TGG | 0.663440 | 7.2:+5910028 | MS.gene07068:intron |
| GTAGTTGATGGAAACGACAT+GGG | 0.665582 | 7.2:+5916498 | MS.gene07068:CDS |
| AAGTTAATGGACCTGATGGG+TGG | 0.666461 | 7.2:+5910266 | MS.gene07068:CDS |
| GATGACACAAGATCGCCAGA+AGG | 0.666773 | 7.2:-5910771 | None:intergenic |
| TTAGTTAGGATGGTTAGTAG+CGG | 0.666821 | 7.2:+5917637 | MS.gene07068:CDS |
| TAGTAGCGGTCAGAAAGCAA+CGG | 0.675411 | 7.2:+5917651 | MS.gene07068:CDS |
| CAACTTCAAGAAAAGATGCG+AGG | 0.676910 | 7.2:+5928084 | MS.gene07068:CDS |
| CAGAAATTCACTACGCTCGG+AGG | 0.677987 | 7.2:-5920009 | None:intergenic |
| TCTGGGAATTATCGTCTGAG+AGG | 0.678057 | 7.2:+5927148 | MS.gene07068:CDS |
| GTATTCAGAGGATGTGTCCG+AGG | 0.678153 | 7.2:+5914176 | MS.gene07068:CDS |
| TCATCAATCCTGTATCTCAG+TGG | 0.679879 | 7.2:-5927677 | None:intergenic |
| ATACAGAGGACCTGCCACAA+AGG | 0.685844 | 7.2:-5922593 | None:intergenic |
| ATATGAACACCAGAAAGAGG+AGG | 0.692528 | 7.2:-5922484 | None:intergenic |
| AAACCTGTAAGCTACTCGCG+TGG | 0.699670 | 7.2:-5925163 | None:intergenic |
| AGAAGTTCGAAATTGGCAGG+GGG | 0.705475 | 7.2:-5927523 | None:intergenic |
| CCTTGCAGACTACAGCACCA+CGG | 0.708504 | 7.2:-5919905 | None:intergenic |
| TAACCAACATCATCATACAG+AGG | 0.720625 | 7.2:-5922607 | None:intergenic |
| AAAATGTACCTCGAGTCCCG+AGG | 0.736060 | 7.2:-5920991 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 5909312 | 5928186 | 5909312 | ID=MS.gene07068 |
| chr7.2 | mRNA | 5909312 | 5928186 | 5909312 | ID=MS.gene07068.t1;Parent=MS.gene07068 |
| chr7.2 | exon | 5909312 | 5909413 | 5909312 | ID=MS.gene07068.t1.exon1;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5909312 | 5909413 | 5909312 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5909586 | 5909651 | 5909586 | ID=MS.gene07068.t1.exon2;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5909586 | 5909651 | 5909586 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5910032 | 5910118 | 5910032 | ID=MS.gene07068.t1.exon3;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5910032 | 5910118 | 5910032 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5910250 | 5910306 | 5910250 | ID=MS.gene07068.t1.exon4;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5910250 | 5910306 | 5910250 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5910497 | 5910561 | 5910497 | ID=MS.gene07068.t1.exon5;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5910497 | 5910561 | 5910497 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5910674 | 5910843 | 5910674 | ID=MS.gene07068.t1.exon6;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5910674 | 5910843 | 5910674 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5913518 | 5913579 | 5913518 | ID=MS.gene07068.t1.exon7;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5913518 | 5913579 | 5913518 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5913729 | 5913812 | 5913729 | ID=MS.gene07068.t1.exon8;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5913729 | 5913812 | 5913729 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5914144 | 5914303 | 5914144 | ID=MS.gene07068.t1.exon9;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5914144 | 5914303 | 5914144 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5914715 | 5914830 | 5914715 | ID=MS.gene07068.t1.exon10;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5914715 | 5914830 | 5914715 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5916471 | 5916599 | 5916471 | ID=MS.gene07068.t1.exon11;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5916471 | 5916599 | 5916471 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5917350 | 5917421 | 5917350 | ID=MS.gene07068.t1.exon12;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5917350 | 5917421 | 5917350 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5917577 | 5917672 | 5917577 | ID=MS.gene07068.t1.exon13;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5917577 | 5917672 | 5917577 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5917754 | 5917831 | 5917754 | ID=MS.gene07068.t1.exon14;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5917754 | 5917831 | 5917754 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5918508 | 5918636 | 5918508 | ID=MS.gene07068.t1.exon15;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5918508 | 5918636 | 5918508 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5919891 | 5920067 | 5919891 | ID=MS.gene07068.t1.exon16;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5919891 | 5920067 | 5919891 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5920246 | 5920449 | 5920246 | ID=MS.gene07068.t1.exon17;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5920246 | 5920449 | 5920246 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5920542 | 5920655 | 5920542 | ID=MS.gene07068.t1.exon18;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5920542 | 5920655 | 5920542 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5920763 | 5921004 | 5920763 | ID=MS.gene07068.t1.exon19;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5920763 | 5921004 | 5920763 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5922258 | 5922303 | 5922258 | ID=MS.gene07068.t1.exon20;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5922258 | 5922303 | 5922258 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5922400 | 5922648 | 5922400 | ID=MS.gene07068.t1.exon21;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5922400 | 5922648 | 5922400 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5924461 | 5924688 | 5924461 | ID=MS.gene07068.t1.exon22;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5924461 | 5924688 | 5924461 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5925090 | 5925181 | 5925090 | ID=MS.gene07068.t1.exon23;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5925090 | 5925181 | 5925090 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5927042 | 5927270 | 5927042 | ID=MS.gene07068.t1.exon24;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5927042 | 5927270 | 5927042 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5927359 | 5927712 | 5927359 | ID=MS.gene07068.t1.exon25;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5927359 | 5927712 | 5927359 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5927854 | 5927931 | 5927854 | ID=MS.gene07068.t1.exon26;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5927854 | 5927931 | 5927854 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| chr7.2 | exon | 5928031 | 5928186 | 5928031 | ID=MS.gene07068.t1.exon27;Parent=MS.gene07068.t1 |
| chr7.2 | CDS | 5928031 | 5928186 | 5928031 | ID=cds.MS.gene07068.t1;Parent=MS.gene07068.t1 |
| Gene Sequence |
| Protein sequence |
