AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88334

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88334.t1 MTR_5g025100 97.246 944 20 1 10 947 322 1265 0.0 1889
MS.gene88334.t1 MTR_8g072430 75.636 944 204 3 10 946 326 1250 0.0 1452
MS.gene88334.t1 MTR_5g049620 39.901 406 227 6 549 939 346 749 3.11e-82 285
MS.gene88334.t1 MTR_5g049820 39.901 406 227 6 549 939 346 749 7.60e-82 285
MS.gene88334.t1 MTR_5g031470 39.901 406 227 6 549 939 371 774 1.14e-80 283
MS.gene88334.t1 MTR_7g109130 39.594 394 216 9 550 926 72 460 5.61e-78 269
MS.gene88334.t1 MTR_7g109130 39.594 394 216 9 550 926 151 539 1.71e-77 270
MS.gene88334.t1 MTR_2g010760 35.075 536 291 15 390 903 276 776 1.05e-76 267
MS.gene88334.t1 MTR_1g082920 41.775 383 207 6 557 925 127 507 2.09e-76 266
MS.gene88334.t1 MTR_4g092140 36.526 449 237 11 472 892 229 657 3.47e-76 263
MS.gene88334.t1 MTR_2g082570 39.267 382 205 7 549 903 371 752 4.90e-76 265
MS.gene88334.t1 MTR_7g109130 39.594 394 216 9 550 926 373 761 6.80e-76 269
MS.gene88334.t1 MTR_7g112420 39.481 385 211 7 565 932 259 638 1.54e-75 266
MS.gene88334.t1 MTR_1g087880 38.384 396 227 7 541 922 360 752 4.37e-75 266
MS.gene88334.t1 MTR_4g081390 40.217 368 195 6 549 891 404 771 3.76e-74 260
MS.gene88334.t1 MTR_7g109130 38.889 396 219 9 550 926 373 764 5.20e-74 264
MS.gene88334.t1 MTR_2g069950 37.923 414 240 6 519 918 282 692 5.38e-74 263
MS.gene88334.t1 MTR_5g096570 38.642 427 235 9 520 922 370 793 5.45e-74 267
MS.gene88334.t1 MTR_7g113520 39.798 397 222 8 557 939 107 500 1.77e-73 257
MS.gene88334.t1 MTR_7g112420 39.221 385 205 8 565 930 389 763 7.00e-73 260
MS.gene88334.t1 MTR_1g083770 39.740 385 210 8 565 930 398 779 4.32e-71 254
MS.gene88334.t1 MTR_8g098230 39.119 386 211 10 565 932 471 850 7.51e-71 255
MS.gene88334.t1 MTR_8g098230 38.422 393 212 10 565 932 471 858 5.24e-69 250
MS.gene88334.t1 MTR_3g060900 39.005 382 203 9 568 932 429 797 1.89e-68 248
MS.gene88334.t1 MTR_1g081800 41.691 343 182 5 564 892 75 413 5.17e-66 234
MS.gene88334.t1 MTR_7g091290 35.952 420 240 9 520 916 328 741 3.97e-63 232
MS.gene88334.t1 MTR_8g104200 33.898 531 281 15 458 932 364 880 8.07e-61 226
MS.gene88334.t1 MTR_4g081390 38.602 329 177 6 550 853 407 735 2.93e-60 220
MS.gene88334.t1 MTR_2g087840 36.215 428 212 15 537 927 64 467 1.54e-58 219
MS.gene88334.t1 MTR_7g105030 37.028 397 197 11 574 920 1 394 2.67e-58 217
MS.gene88334.t1 MTR_7g105030 37.028 397 197 11 574 920 1 394 2.67e-58 217
MS.gene88334.t1 MTR_4g087040 38.281 384 200 13 567 918 179 557 3.39e-57 216
MS.gene88334.t1 MTR_1g059730 36.598 388 198 8 578 920 14 398 1.22e-56 212
MS.gene88334.t1 MTR_7g091290 35.000 420 203 10 520 916 325 697 6.23e-56 210
MS.gene88334.t1 MTR_1g067630 35.567 388 208 10 573 920 50 435 1.20e-55 209
MS.gene88334.t1 MTR_2g096010 35.079 382 207 7 578 920 50 429 1.60e-55 209
MS.gene88334.t1 MTR_4g123730 37.879 330 174 8 597 899 168 493 4.86e-54 206
MS.gene88334.t1 MTR_4g094882 34.091 396 207 10 578 923 13 404 6.75e-54 204
MS.gene88334.t1 MTR_1g018940 34.783 368 188 9 578 899 9 370 4.23e-53 201
MS.gene88334.t1 MTR_3g100270 34.454 357 198 7 573 899 5 355 1.46e-52 200
MS.gene88334.t1 MTR_5g066320 36.857 350 180 9 578 894 18 359 1.88e-52 200
MS.gene88334.t1 MTR_1g484960 36.544 353 194 7 577 910 3 344 2.00e-52 200
MS.gene88334.t1 MTR_3g084790 36.283 339 175 9 622 925 138 470 3.23e-52 199
MS.gene88334.t1 MTR_4g112350 36.202 337 189 6 577 892 123 454 3.59e-51 193
MS.gene88334.t1 MTR_2g055910 34.321 405 206 14 534 892 6 396 8.00e-51 190
MS.gene88334.t1 MTR_3g102170 32.587 402 218 9 578 932 9 404 8.95e-51 194
MS.gene88334.t1 MTR_8g080910 35.736 333 178 7 622 921 93 422 2.25e-50 194
MS.gene88334.t1 MTR_2g082570 36.700 297 162 6 549 819 371 667 3.06e-49 186
MS.gene88334.t1 MTR_4g124650 35.673 342 197 8 577 905 143 474 7.41e-49 188
MS.gene88334.t1 MTR_1g017540 38.225 293 162 5 617 894 47 335 6.01e-48 184
MS.gene88334.t1 MTR_8g471180 37.830 341 189 6 564 893 133 461 4.02e-47 184
MS.gene88334.t1 MTR_6g084490 33.085 402 208 11 565 932 465 839 1.92e-46 180
MS.gene88334.t1 MTR_7g075060 33.251 406 207 12 574 931 49 438 2.19e-46 180
MS.gene88334.t1 MTR_5g011500 34.444 360 186 10 574 894 54 402 1.03e-45 178
MS.gene88334.t1 MTR_6g082470 33.795 361 210 11 577 921 30 377 3.46e-45 177
MS.gene88334.t1 MTR_4g071900 32.520 369 222 9 560 911 7 365 5.80e-45 175
MS.gene88334.t1 MTR_2g101990 37.425 334 181 10 577 892 185 508 5.94e-45 174
MS.gene88334.t1 MTR_3g117330 34.402 343 207 8 578 910 100 434 7.12e-45 176
MS.gene88334.t1 MTR_5g021650 33.333 354 207 8 577 911 20 363 4.11e-44 173
MS.gene88334.t1 MTR_7g093720 34.848 330 195 8 575 892 71 392 6.24e-44 173
MS.gene88334.t1 MTR_6g086735 35.522 335 188 9 576 892 114 438 2.34e-43 168
MS.gene88334.t1 MTR_6g086735 35.522 335 188 9 576 892 114 438 2.51e-43 168
MS.gene88334.t1 MTR_3g113110 34.503 342 196 9 577 900 19 350 3.09e-43 171
MS.gene88334.t1 MTR_4g071210 34.218 339 191 9 578 899 90 413 3.83e-43 171
MS.gene88334.t1 MTR_4g071210 34.218 339 191 9 578 899 90 413 3.89e-43 171
MS.gene88334.t1 MTR_4g119980 34.748 377 201 11 569 912 197 561 5.61e-43 169
MS.gene88334.t1 MTR_8g076190 33.521 355 205 11 577 911 19 362 1.03e-42 169
MS.gene88334.t1 MTR_8g076190 33.521 355 205 11 577 911 19 362 1.65e-42 168
MS.gene88334.t1 MTR_3g055940 34.700 317 167 8 618 900 106 416 9.17e-42 166
MS.gene88334.t1 MTR_5g094310 32.551 341 195 8 617 925 106 443 9.77e-42 166
MS.gene88334.t1 MTR_8g076190 32.873 362 205 12 577 911 19 369 1.82e-40 162
MS.gene88334.t1 MTR_7g061020 33.136 338 197 9 577 894 25 353 4.51e-40 158
MS.gene88334.t1 MTR_2g436650 32.080 399 228 11 569 934 109 497 7.53e-39 156
MS.gene88334.t1 MTR_2g436650 32.080 399 228 11 569 934 189 577 1.86e-38 155
MS.gene88334.t1 MTR_6g053680 29.345 351 223 10 577 915 5 342 2.33e-27 120
MS.gene88334.t1 MTR_1g075680 28.763 299 158 10 636 896 119 400 1.05e-26 117
MS.gene88334.t1 MTR_3g113630 29.825 285 156 12 622 880 145 411 1.03e-16 85.9
MS.gene88334.t1 MTR_3g113630 29.825 285 156 12 622 880 145 411 1.22e-16 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88334.t1 AT5G65930 71.672 939 259 2 10 942 321 1258 0.0 1346
MS.gene88334.t1 AT5G65930 71.672 939 259 2 10 942 328 1265 0.0 1345
MS.gene88334.t1 AT5G65930 71.672 939 259 2 10 942 322 1259 0.0 1345
MS.gene88334.t1 AT2G22610 35.113 487 280 8 469 941 330 794 1.71e-83 291
MS.gene88334.t1 AT2G22610 35.113 487 280 8 469 941 331 795 2.57e-83 291
MS.gene88334.t1 AT2G22610 35.113 487 280 8 469 941 330 794 2.97e-83 291
MS.gene88334.t1 AT5G27550 40.095 419 230 7 491 898 54 462 4.65e-83 285
MS.gene88334.t1 AT5G27550 40.095 419 230 7 491 898 54 462 4.65e-83 285
MS.gene88334.t1 AT4G21270 34.489 548 290 13 390 903 272 784 3.24e-82 283
MS.gene88334.t1 AT1G09170 41.026 390 204 8 565 936 422 803 5.50e-80 278
MS.gene88334.t1 AT1G09170 41.026 390 204 8 565 936 422 803 9.03e-80 278
MS.gene88334.t1 AT4G27180 36.008 511 281 15 411 891 229 723 4.73e-79 273
MS.gene88334.t1 AT4G27180 36.008 511 281 15 411 891 229 723 4.73e-79 273
MS.gene88334.t1 AT1G09170 41.026 390 204 8 565 936 422 803 1.72e-78 277
MS.gene88334.t1 AT5G27000 40.955 398 212 7 550 929 367 759 3.27e-78 275
MS.gene88334.t1 AT1G09170 41.576 368 191 7 565 914 422 783 1.09e-77 271
MS.gene88334.t1 AT1G09170 41.576 368 191 7 565 914 422 783 1.09e-77 271
MS.gene88334.t1 AT5G54670 40.150 401 212 10 530 905 290 687 2.28e-77 267
MS.gene88334.t1 AT4G05190 37.558 434 217 12 509 903 350 768 8.03e-77 268
MS.gene88334.t1 AT4G05190 37.269 432 221 11 509 903 363 781 1.25e-76 267
MS.gene88334.t1 AT5G54670 40.150 401 212 10 530 905 350 747 1.26e-76 266
MS.gene88334.t1 AT5G54670 40.150 401 212 10 530 905 350 747 1.26e-76 266
MS.gene88334.t1 AT1G72250 37.156 436 242 8 519 933 442 866 2.50e-76 273
MS.gene88334.t1 AT1G72250 37.156 436 242 8 519 933 453 877 2.74e-76 272
MS.gene88334.t1 AT1G72250 37.156 436 242 8 519 933 433 857 2.77e-76 272
MS.gene88334.t1 AT1G72250 37.156 436 242 8 519 933 454 878 3.00e-76 272
MS.gene88334.t1 AT2G47500 35.963 431 256 6 511 922 326 755 2.52e-74 263
MS.gene88334.t1 AT2G47500 35.963 431 256 6 511 922 326 755 5.31e-74 263
MS.gene88334.t1 AT1G73860 33.824 544 303 16 438 932 259 794 1.26e-70 253
MS.gene88334.t1 AT1G73860 33.824 544 303 16 438 932 342 877 2.42e-70 253
MS.gene88334.t1 AT1G55550 38.333 360 195 5 549 892 63 411 5.99e-70 249
MS.gene88334.t1 AT3G10310 37.931 435 237 15 507 920 296 718 4.17e-69 249
MS.gene88334.t1 AT3G10310 37.931 435 237 15 507 920 296 718 4.42e-69 249
MS.gene88334.t1 AT3G44730 37.696 382 216 9 568 932 368 744 5.01e-69 250
MS.gene88334.t1 AT3G44730 37.696 382 216 9 568 932 368 744 5.01e-69 250
MS.gene88334.t1 AT3G44730 37.696 382 216 9 568 932 413 789 5.54e-69 250
MS.gene88334.t1 AT3G44730 37.696 382 216 9 568 932 413 789 5.54e-69 250
MS.gene88334.t1 AT1G63640 39.175 388 208 10 565 932 450 829 9.47e-69 249
MS.gene88334.t1 AT1G63640 39.175 388 208 10 565 932 460 839 1.15e-68 249
MS.gene88334.t1 AT1G63640 39.175 388 208 10 565 932 460 839 1.15e-68 249
MS.gene88334.t1 AT1G63640 39.175 388 208 10 565 932 460 839 1.28e-68 249
MS.gene88334.t1 AT5G41310 33.696 552 279 15 439 933 251 772 2.27e-68 247
MS.gene88334.t1 AT1G18410 32.532 541 315 11 389 892 290 817 1.92e-67 244
MS.gene88334.t1 AT1G18410 32.532 541 315 11 389 892 290 817 1.92e-67 244
MS.gene88334.t1 AT1G18410 32.902 541 313 12 389 892 433 960 2.25e-67 246
MS.gene88334.t1 AT1G63640 38.228 395 195 10 565 932 460 832 2.72e-67 244
MS.gene88334.t1 AT1G09170 42.444 311 156 6 565 858 422 726 8.18e-67 238
MS.gene88334.t1 AT1G09170 42.444 311 156 6 565 858 422 726 8.18e-67 238
MS.gene88334.t1 AT1G09170 37.949 390 180 8 565 936 422 767 8.22e-67 243
MS.gene88334.t1 AT1G18410 32.532 541 307 12 389 892 280 799 3.51e-66 241
MS.gene88334.t1 AT1G18410 32.902 541 305 13 389 892 433 952 5.54e-66 241
MS.gene88334.t1 AT5G27950 40.580 345 183 7 564 892 66 404 3.75e-65 231
MS.gene88334.t1 AT2G28620 38.220 382 195 9 578 920 51 430 9.98e-58 216
MS.gene88334.t1 AT2G28620 38.220 382 195 9 578 920 51 430 9.98e-58 216
MS.gene88334.t1 AT2G28620 38.220 382 195 9 578 920 51 430 1.34e-57 216
MS.gene88334.t1 AT2G36200 37.113 388 196 10 578 920 13 397 1.66e-57 215
MS.gene88334.t1 AT2G36200 37.113 388 196 10 578 920 13 397 2.57e-57 214
MS.gene88334.t1 AT3G19050 38.378 370 190 11 567 904 179 542 4.28e-57 216
MS.gene88334.t1 AT3G45850 37.143 385 195 10 578 920 56 435 2.04e-56 212
MS.gene88334.t1 AT3G45850 37.143 385 195 10 578 920 56 435 2.04e-56 212
MS.gene88334.t1 AT3G44050 35.802 405 218 12 561 927 73 473 1.02e-55 211
MS.gene88334.t1 AT3G17360 38.043 368 186 11 578 909 169 530 1.23e-55 211
MS.gene88334.t1 AT3G17360 38.571 350 181 9 578 899 169 512 1.32e-55 211
MS.gene88334.t1 AT3G17360 38.043 368 186 11 578 909 169 530 1.46e-55 211
MS.gene88334.t1 AT3G50240 34.889 407 208 13 578 935 26 424 3.75e-55 207
MS.gene88334.t1 AT3G50240 35.492 386 193 12 578 914 26 404 1.31e-54 206
MS.gene88334.t1 AT1G18550 38.304 342 174 10 577 892 151 481 1.36e-54 203
MS.gene88334.t1 AT3G50240 35.492 386 193 12 578 914 26 404 1.54e-54 206
MS.gene88334.t1 AT5G47820 33.419 389 201 10 578 914 12 394 5.44e-54 204
MS.gene88334.t1 AT5G47820 33.419 389 201 10 578 914 12 394 5.44e-54 204
MS.gene88334.t1 AT5G60930 36.111 360 183 9 578 894 7 362 8.17e-52 198
MS.gene88334.t1 AT4G14150 35.977 353 174 9 578 894 92 428 8.60e-52 198
MS.gene88334.t1 AT5G60930 36.111 360 183 9 578 894 7 362 1.65e-51 197
MS.gene88334.t1 AT5G60930 36.111 360 183 9 578 894 7 362 1.76e-51 197
MS.gene88334.t1 AT3G23670 39.935 308 143 9 622 894 133 433 6.72e-51 194
MS.gene88334.t1 AT3G23670 39.806 309 142 9 622 894 133 433 8.76e-51 195
MS.gene88334.t1 AT3G63480 34.971 346 187 9 578 896 4 338 1.17e-49 183
MS.gene88334.t1 AT1G59540 37.500 304 173 5 620 910 44 343 1.42e-49 189
MS.gene88334.t1 AT2G37420 33.898 354 197 8 578 899 49 397 1.47e-49 191
MS.gene88334.t1 AT2G37420 33.898 354 197 8 578 899 49 397 1.47e-49 191
MS.gene88334.t1 AT3G63480 34.857 350 186 11 578 896 4 342 4.05e-48 179
MS.gene88334.t1 AT3G10180 34.971 346 178 8 577 894 3 329 5.17e-48 186
MS.gene88334.t1 AT3G10180 34.971 346 178 8 577 894 3 329 5.72e-48 186
MS.gene88334.t1 AT3G54870 35.922 309 162 9 612 894 145 443 6.36e-48 185
MS.gene88334.t1 AT3G54870 35.922 309 162 9 612 894 145 443 6.56e-48 185
MS.gene88334.t1 AT3G54870 35.922 309 162 9 612 894 145 443 8.49e-48 185
MS.gene88334.t1 AT3G49650 33.237 346 205 6 578 902 15 355 1.25e-47 183
MS.gene88334.t1 AT5G65460 36.571 350 181 10 564 893 125 453 2.44e-47 184
MS.gene88334.t1 AT5G65460 36.571 350 181 10 564 893 125 453 3.03e-47 184
MS.gene88334.t1 AT5G65460 36.571 350 181 10 564 893 125 453 3.32e-47 184
MS.gene88334.t1 AT5G65460 36.571 350 181 10 564 893 125 453 3.55e-47 184
MS.gene88334.t1 AT3G50240 37.417 302 147 8 653 914 3 302 8.02e-47 182
MS.gene88334.t1 AT4G39050 35.593 354 208 10 557 899 78 422 1.42e-46 181
MS.gene88334.t1 AT3G12020 36.095 338 190 10 570 892 62 388 1.68e-46 181
MS.gene88334.t1 AT3G12020 36.095 338 190 10 570 892 62 388 1.68e-46 181
MS.gene88334.t1 AT4G24170 34.957 349 204 9 577 911 6 345 2.60e-46 180
MS.gene88334.t1 AT4G24170 34.957 349 204 9 577 911 6 345 2.60e-46 180
MS.gene88334.t1 AT3G12020 36.095 338 190 10 570 892 62 388 2.83e-46 181
MS.gene88334.t1 AT3G12020 36.095 338 190 10 570 892 62 388 2.83e-46 181
MS.gene88334.t1 AT2G21300 33.807 352 206 9 577 911 24 365 9.50e-46 178
MS.gene88334.t1 AT2G21300 33.807 352 206 9 577 911 24 365 9.50e-46 178
MS.gene88334.t1 AT2G21300 33.807 352 206 9 577 911 24 365 9.50e-46 178
MS.gene88334.t1 AT2G21300 33.807 352 206 9 577 911 24 365 9.50e-46 178
MS.gene88334.t1 AT2G21300 33.807 352 206 9 577 911 24 365 9.50e-46 178
MS.gene88334.t1 AT1G12430 34.831 356 183 10 577 894 70 414 1.42e-45 177
MS.gene88334.t1 AT1G12430 34.831 356 183 10 577 894 70 414 1.48e-45 177
MS.gene88334.t1 AT5G65460 36.134 357 180 11 564 893 125 460 2.50e-45 178
MS.gene88334.t1 AT1G01950 34.243 403 207 13 574 931 57 446 4.36e-45 176
MS.gene88334.t1 AT1G01950 34.243 403 207 13 574 931 57 446 4.73e-45 176
MS.gene88334.t1 AT1G01950 34.243 403 207 13 574 931 57 446 5.12e-45 176
MS.gene88334.t1 AT2G21380 34.916 358 212 9 570 917 97 443 9.83e-45 176
MS.gene88334.t1 AT2G21380 34.916 358 212 9 570 917 97 443 9.83e-45 176
MS.gene88334.t1 AT1G21730 33.613 357 212 11 574 917 72 416 7.22e-44 172
MS.gene88334.t1 AT5G06670 34.242 330 197 9 575 892 64 385 7.44e-44 171
MS.gene88334.t1 AT5G06670 34.242 330 197 9 575 892 64 385 7.89e-44 171
MS.gene88334.t1 AT5G06670 34.242 330 197 9 575 892 64 385 7.89e-44 171
MS.gene88334.t1 AT5G06670 34.242 330 197 9 575 892 64 385 7.89e-44 171
MS.gene88334.t1 AT4G38950 32.670 352 210 8 577 911 13 354 9.15e-44 171
MS.gene88334.t1 AT4G38950 32.670 352 210 8 577 911 13 354 9.15e-44 171
MS.gene88334.t1 AT4G38950 32.670 352 210 8 577 911 13 354 9.15e-44 171
MS.gene88334.t1 AT4G38950 32.670 352 210 8 577 911 13 354 9.15e-44 171
MS.gene88334.t1 AT4G38950 32.670 352 210 8 577 911 13 354 9.15e-44 171
MS.gene88334.t1 AT5G06670 34.242 330 197 9 575 892 64 385 1.50e-43 172
MS.gene88334.t1 AT5G06670 34.242 330 197 9 575 892 64 385 1.50e-43 172
MS.gene88334.t1 AT3G43210 34.670 349 204 8 577 911 29 367 6.76e-43 169
MS.gene88334.t1 AT3G43210 34.670 349 204 8 577 911 29 367 6.76e-43 169
MS.gene88334.t1 AT3G43210 34.670 349 204 8 577 911 29 367 6.76e-43 169
MS.gene88334.t1 AT3G43210 34.670 349 204 8 577 911 29 367 6.76e-43 169
MS.gene88334.t1 AT3G43210 34.670 349 204 8 577 911 29 367 6.76e-43 169
MS.gene88334.t1 AT1G18370 31.856 361 217 10 577 921 31 378 1.05e-42 169
MS.gene88334.t1 AT3G16060 35.735 347 193 10 576 902 168 504 4.31e-42 165
MS.gene88334.t1 AT5G10470 34.493 345 195 8 564 893 129 457 4.79e-42 167
MS.gene88334.t1 AT5G06670 33.628 339 196 10 575 892 64 394 5.07e-42 167
MS.gene88334.t1 AT5G06670 33.628 339 196 10 575 892 64 394 5.07e-42 167
MS.gene88334.t1 AT5G10470 34.493 345 195 8 564 893 129 457 5.27e-42 167
MS.gene88334.t1 AT3G16630 35.159 347 183 11 576 892 192 526 1.30e-40 161
MS.gene88334.t1 AT3G16630 35.159 347 183 11 576 892 192 526 1.30e-40 161
MS.gene88334.t1 AT5G02370 34.843 287 165 6 613 899 83 347 3.51e-40 157
MS.gene88334.t1 AT3G51150 32.486 354 210 8 577 911 17 360 1.14e-39 159
MS.gene88334.t1 AT3G51150 32.486 354 210 8 577 911 17 360 1.19e-39 159
MS.gene88334.t1 AT3G51150 32.486 354 210 8 577 911 17 360 1.19e-39 159
MS.gene88334.t1 AT3G51150 32.486 354 210 8 577 911 17 360 1.19e-39 159
MS.gene88334.t1 AT5G66310 32.486 354 210 10 577 911 18 361 1.70e-39 159
MS.gene88334.t1 AT5G66310 32.486 354 210 10 577 911 18 361 1.70e-39 159
MS.gene88334.t1 AT5G66310 32.486 354 210 10 577 911 18 361 1.70e-39 159
MS.gene88334.t1 AT5G27950 39.241 237 135 3 664 892 3 238 2.49e-39 152
MS.gene88334.t1 AT1G01950 36.943 314 158 10 649 931 1 305 3.07e-39 157
MS.gene88334.t1 AT1G59540 36.471 255 152 4 662 910 1 251 9.31e-36 146
MS.gene88334.t1 AT3G20150 28.809 361 211 10 607 925 114 470 7.90e-35 144
MS.gene88334.t1 AT3G20150 29.917 361 207 12 607 925 114 470 8.63e-35 144
MS.gene88334.t1 AT4G14330 30.385 260 161 5 643 893 120 368 3.56e-28 122
MS.gene88334.t1 AT5G42490 32.847 274 159 6 577 835 9 272 7.34e-26 115
MS.gene88334.t1 AT5G42490 32.847 274 159 6 577 835 9 272 8.04e-26 115
MS.gene88334.t1 AT3G51150 36.126 191 115 3 727 911 18 207 1.04e-24 111
MS.gene88334.t1 AT5G65460 36.449 214 112 6 687 893 11 207 3.54e-23 107
MS.gene88334.t1 AT5G23910 29.259 270 170 10 636 900 82 335 4.32e-17 86.7
MS.gene88334.t1 AT5G23910 29.259 270 170 10 636 900 78 331 4.33e-17 86.7
MS.gene88334.t1 AT1G20060 25.763 295 184 7 610 887 167 443 7.78e-15 79.7
MS.gene88334.t1 AT1G20060 25.763 295 184 7 610 887 167 443 8.10e-15 79.7
MS.gene88334.t1 AT1G20060 25.763 295 184 7 610 887 167 443 8.47e-15 79.7
MS.gene88334.t1 AT1G20060 25.763 295 184 7 610 887 167 443 8.68e-15 79.7
MS.gene88334.t1 AT1G20060 25.763 295 184 7 610 887 167 443 8.69e-15 79.7
MS.gene88334.t1 AT1G20060 25.763 295 184 7 610 887 167 443 8.75e-15 79.7
MS.gene88334.t1 AT1G20060 25.763 295 184 7 610 887 167 443 9.85e-15 79.3
MS.gene88334.t1 AT1G20060 25.763 295 184 7 610 887 167 443 1.06e-14 79.3
MS.gene88334.t1 AT1G20060 25.632 277 171 7 610 869 167 425 1.08e-14 79.3

Find 154 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCAGCATGATTATATTT+TGG 0.124034 5.3:-14720165 MS.gene88334:CDS
AACTTTATGTTCACCTTCTA+TGG 0.203260 5.3:+14717745 None:intergenic
AACTTCTGCAAGACTATTCT+TGG 0.229344 5.3:+14718771 None:intergenic
GGAAAGACGTTTACAATATA+TGG 0.235126 5.3:-14717227 MS.gene88334:CDS
CTTTCAAGCCTTCTAATTCT+TGG 0.236381 5.3:+14718809 None:intergenic
CTCATTTGTCAAGCATTTGA+TGG 0.242154 5.3:+14718328 None:intergenic
ATCTTCTCCTACAGGTTCTT+TGG 0.250999 5.3:-14719086 MS.gene88334:CDS
TGAAGAAATTGGTTGCTTAT+TGG 0.258883 5.3:-14716024 MS.gene88334:CDS
TTGAGAGACATAATGCAATT+TGG 0.269901 5.3:-14719388 MS.gene88334:CDS
TGAATTTAAGTCTCCGAATA+TGG 0.283169 5.3:-14719047 MS.gene88334:CDS
GAATGCAAAGCGATTAAAAT+TGG 0.284270 5.3:-14716884 MS.gene88334:CDS
GTTATTAGTGCTTTATCTTC+AGG 0.288781 5.3:-14716340 MS.gene88334:CDS
CGCAAAATTGATGATCCTAT+TGG 0.308444 5.3:-14719629 MS.gene88334:CDS
TTCTCATACGATTCCATATT+CGG 0.316423 5.3:+14719034 None:intergenic
ATTCACAAACATGAGAGTTT+TGG 0.334171 5.3:+14716249 None:intergenic
TGACATGGAATCACTTTATA+AGG 0.335607 5.3:-14717801 MS.gene88334:CDS
TTGCAGTTGATTGGCTTTGA+AGG 0.336111 5.3:+14716582 None:intergenic
GCTTTCTGCATTGCAAATCT+TGG 0.340268 5.3:-14720108 MS.gene88334:CDS
ATAATAAGAACACTTCCTTA+TGG 0.344269 5.3:-14719674 MS.gene88334:CDS
CCTTTCCTCTTGCAGTTGAT+TGG 0.344517 5.3:+14716573 None:intergenic
ATATATGATCGCGTGTTTAA+CGG 0.358984 5.3:-14717494 MS.gene88334:CDS
GTCACCTACGGGCATGATTC+GGG 0.364853 5.3:+14720062 None:intergenic
AGTCACCTACGGGCATGATT+CGG 0.368021 5.3:+14720061 None:intergenic
AGCGCTAAATCATCTGATTC+TGG 0.368202 5.3:-14720784 MS.gene88334:CDS
TTCAGAGGAGTACATTGGTT+TGG 0.369283 5.3:-14720675 MS.gene88334:intron
AGATGTGCTTAAACAAGAAT+TGG 0.371438 5.3:-14718078 MS.gene88334:CDS
CGATATTTCAATACCATAGA+AGG 0.379184 5.3:-14717758 MS.gene88334:intron
TTTAATCGCTTTGCATTCTT+CGG 0.379824 5.3:+14716889 None:intergenic
TTGCAAATCTTGGCTGAGAT+TGG 0.384814 5.3:-14720098 MS.gene88334:CDS
ATACCTGCTTGGTTTCAAAC+TGG 0.386871 5.3:+14719308 None:intergenic
GATCGCTCGACTGAAGAAAT+TGG 0.387585 5.3:-14716035 MS.gene88334:CDS
GCTGAGTGCAAATATTCCTT+TGG 0.393951 5.3:+14719415 None:intergenic
AGGAGCAAGCAGGTAGGAAA+GGG 0.396847 5.3:-14716000 MS.gene88334:CDS
ACTTTGTAGAGATGAGCTTA+TGG 0.397808 5.3:-14718363 MS.gene88334:CDS
CCATCGCTCCGCTCTTTAGT+TGG 0.398680 5.3:+14715941 None:intergenic
TTCTCGAGCGATTTCTTCCC+AGG 0.404503 5.3:-14719875 MS.gene88334:CDS
GTTGAATAGTTTGATGATAG+AGG 0.407419 5.3:-14718554 MS.gene88334:CDS
TTTGGCGAAGGACTCTGAAT+TGG 0.409377 5.3:-14718036 MS.gene88334:CDS
TTATTAGTGCTTTATCTTCA+GGG 0.412537 5.3:-14716339 MS.gene88334:CDS
TGATGCATCTTCCCTTCCAA+TGG 0.413163 5.3:+14720133 None:intergenic
AAGTTACGAATGACCGTGAT+AGG 0.414486 5.3:-14718753 MS.gene88334:CDS
TGTAGGAGAAGATCGTGTTT+TGG 0.414826 5.3:+14719096 None:intergenic
CTGTGACAGATCCTATGTTT+TGG 0.416069 5.3:-14720529 MS.gene88334:CDS
TTGGACGACAATAAACATAT+CGG 0.420758 5.3:-14720656 MS.gene88334:CDS
TGCAAATATTCCTTTGGAAT+GGG 0.423198 5.3:+14719421 None:intergenic
GACCGTAAAAGAACGAAGTA+AGG 0.424788 5.3:-14720612 MS.gene88334:CDS
GCCTATGGTCAAACTGGCTC+TGG 0.426355 5.3:-14717248 MS.gene88334:CDS
GCATGAAGAAACGTAAATCT+AGG 0.434617 5.3:-14720840 MS.gene88334:CDS
TCTAGTCATTGCTATTTGCC+TGG 0.437676 5.3:+14719857 None:intergenic
TCGGAACGGCGGCATACAGC+AGG 0.446869 5.3:-14716671 MS.gene88334:CDS
CGTCCAGGTAGGAGTCCAAT+AGG 0.450559 5.3:+14719614 None:intergenic
TAGCGCTTGTGACAACTTTG+CGG 0.450699 5.3:+14720800 None:intergenic
TATGGCTGAATCTACACGTT+TGG 0.451109 5.3:-14718054 MS.gene88334:CDS
GTGCAAATATTCCTTTGGAA+TGG 0.451339 5.3:+14719420 None:intergenic
TCATCCAAGCTTGATTCTAC+TGG 0.451499 5.3:+14716220 None:intergenic
GTTAACTTGTGATTTCTGTA+AGG 0.455328 5.3:+14716304 None:intergenic
ATTACCAACAAGGACTCTAT+TGG 0.455358 5.3:-14718529 MS.gene88334:CDS
AATGTTTGCGTATTTGCCTA+TGG 0.455959 5.3:-14717263 MS.gene88334:CDS
TAGAATAATACAAAGGGGTT+CGG 0.458994 5.3:-14716690 MS.gene88334:CDS
ATTGAATAGAATAATACAAA+GGG 0.460145 5.3:-14716696 MS.gene88334:CDS
ATTAAAATTGGAGATTAAGA+AGG 0.461869 5.3:-14716872 MS.gene88334:CDS
GACTAGAGCTAGACGCGAAT+GGG 0.462586 5.3:-14719841 MS.gene88334:CDS
GAGACTCTCCAAGAATTAGA+AGG 0.466080 5.3:-14718817 MS.gene88334:CDS
TGCCGCTTGCATCCTCAGTA+TGG 0.466773 5.3:+14717832 None:intergenic
TCTTTCTTGCTATCATTCAC+TGG 0.476205 5.3:-14719808 MS.gene88334:intron
TGGACGACAATAAACATATC+GGG 0.476272 5.3:-14720655 MS.gene88334:CDS
AGATTTGAGAGAAATGAAAG+AGG 0.479579 5.3:-14717982 MS.gene88334:intron
GTATTTGCCTATGGTCAAAC+TGG 0.480241 5.3:-14717254 MS.gene88334:CDS
TTGAATAGTTTGATGATAGA+GGG 0.482115 5.3:-14718553 MS.gene88334:CDS
ATCACTTTATAAGGAGGAGC+AGG 0.489894 5.3:-14717792 MS.gene88334:CDS
TATGGATCCGAAAACAATCC+TGG 0.490759 5.3:-14717209 MS.gene88334:CDS
GATCCTATTGGACTCCTACC+TGG 0.491237 5.3:-14719617 MS.gene88334:CDS
GCTTAAACAAGAATTGGTTA+TGG 0.495869 5.3:-14718072 MS.gene88334:CDS
AAGGAGCAAGCAGGTAGGAA+AGG 0.497385 5.3:-14716001 MS.gene88334:CDS
GGGAAGAAATCGCTCGAGAA+AGG 0.498471 5.3:+14719878 None:intergenic
CATCATTTATGTGTGTCTGA+AGG 0.498717 5.3:+14719137 None:intergenic
AGTTTACTGTTGAGCATCCA+TGG 0.501515 5.3:-14717541 MS.gene88334:CDS
AGCTAGACGCGAATGGGAGT+TGG 0.501947 5.3:-14719835 MS.gene88334:CDS
TACTAGCAATTAACAAGAGA+GGG 0.505042 5.3:-14719586 MS.gene88334:CDS
CTAGTCATTGCTATTTGCCT+GGG 0.507731 5.3:+14719858 None:intergenic
GAAATTGGTTGCTTATTGGA+AGG 0.510480 5.3:-14716020 MS.gene88334:CDS
GATGCATCTTCCCTTCCAAT+GGG 0.511589 5.3:+14720134 None:intergenic
AAAACACGATCTTCTCCTAC+AGG 0.513548 5.3:-14719094 MS.gene88334:CDS
TTTGCTTTATCATCTTTCCA+TGG 0.514104 5.3:+14717524 None:intergenic
ATCATTTATGTGTGTCTGAA+GGG 0.514510 5.3:+14719138 None:intergenic
TACTGTCGTCTAAGACCCCT+TGG 0.521922 5.3:-14717614 MS.gene88334:CDS
AGCTCCAATAGAGTCCTTGT+TGG 0.525683 5.3:+14718525 None:intergenic
TGGGTAATTATCCCATTGGA+AGG 0.526466 5.3:-14720145 MS.gene88334:CDS
CCTGAAGCTACTACATTGAA+TGG 0.526848 5.3:+14715915 None:intergenic
TATTCTATTCAATTCCTCCA+TGG 0.528116 5.3:+14716706 None:intergenic
AAATCATCTGATTCTGGCAA+TGG 0.531366 5.3:-14720778 MS.gene88334:intron
ATCTCCAGTAGAATCAAGCT+TGG 0.537276 5.3:-14716224 MS.gene88334:CDS
TATTAGTGCTTTATCTTCAG+GGG 0.540752 5.3:-14716338 MS.gene88334:CDS
ATTGCTAGTATTATTCGTCC+AGG 0.540815 5.3:+14719599 None:intergenic
CTGTAGTAGCACGTGGCGTA+AGG 0.540903 5.3:+14717186 None:intergenic
CGAGAAGCAAATACAAGAAG+AGG 0.550738 5.3:-14718839 MS.gene88334:CDS
GTAGCACGTGGCGTAAGGCC+AGG 0.555439 5.3:+14717191 None:intergenic
TGAATAGTTTGATGATAGAG+GGG 0.560170 5.3:-14718552 MS.gene88334:CDS
TACGATGCAGGCGTACATGT+TGG 0.560256 5.3:-14716947 MS.gene88334:intron
TCTTTATCCAAAGAACCTGT+AGG 0.560674 5.3:+14719079 None:intergenic
AACAAATCATTATCAGCACT+TGG 0.562187 5.3:-14716367 MS.gene88334:CDS
TGACTAGAGCTAGACGCGAA+TGG 0.564069 5.3:-14719842 MS.gene88334:CDS
AGGTGTTAACAATACCTGCT+TGG 0.565515 5.3:+14719297 None:intergenic
TCCAGAGCCAGTTTGACCAT+AGG 0.565977 5.3:+14717247 None:intergenic
CAAAGCCAATCAACTGCAAG+AGG 0.566339 5.3:-14716578 MS.gene88334:CDS
TACAAAGGGGTTCGGAACGG+CGG 0.568421 5.3:-14716682 MS.gene88334:CDS
ATTAGTGCTTTATCTTCAGG+GGG 0.569912 5.3:-14716337 MS.gene88334:CDS
ACCGTAAAAGAACGAAGTAA+GGG 0.570503 5.3:-14720611 MS.gene88334:CDS
TGAGAAGAAGAATACTGAAG+AGG 0.573248 5.3:-14718273 MS.gene88334:intron
AATTGAATAGAATAATACAA+AGG 0.573315 5.3:-14716697 MS.gene88334:CDS
GGAGATTAAGAAGGACTCAA+AGG 0.575254 5.3:-14716863 MS.gene88334:intron
ATTCCAGTTTGAAACCAAGC+AGG 0.576553 5.3:-14719311 MS.gene88334:intron
TGAATCTACACGTTTGGCGA+AGG 0.579792 5.3:-14718048 MS.gene88334:CDS
TAGGACAACTGCCAAAACAT+AGG 0.581599 5.3:+14720518 None:intergenic
CACTGTGTCGATTTCCACCA+TGG 0.584542 5.3:-14716723 MS.gene88334:CDS
TTGATGAGTGATTCACTTGG+AGG 0.585905 5.3:-14716277 MS.gene88334:CDS
GCTTATTGGAAGGAGCAAGC+AGG 0.586519 5.3:-14716010 MS.gene88334:CDS
CCAATCAACTGCAAGAGGAA+AGG 0.588259 5.3:-14716573 MS.gene88334:intron
TGTTGAAGATTCTCAAAGGA+AGG 0.588937 5.3:-14718987 MS.gene88334:CDS
GCTCTGAACTCTCAAGTACA+TGG 0.591407 5.3:-14718116 MS.gene88334:CDS
TATCATCAAACTATTCAACT+TGG 0.596138 5.3:+14718558 None:intergenic
ATACTAGCAATTAACAAGAG+AGG 0.596221 5.3:-14719587 MS.gene88334:CDS
GGAGCAAGCAGGTAGGAAAG+GGG 0.597716 5.3:-14715999 MS.gene88334:CDS
TTAGGTATGCGTCGCGTGTG+AGG 0.597900 5.3:-14716099 MS.gene88334:intron
TCTATTCAATTCCTCCATGG+TGG 0.603013 5.3:+14716709 None:intergenic
CCAACTAAAGAGCGGAGCGA+TGG 0.605051 5.3:-14715941 MS.gene88334:CDS
ACATATCGGGGATCTATTAG+CGG 0.605504 5.3:-14720642 MS.gene88334:CDS
TATTATTCAGAGGAGTACAT+TGG 0.606149 5.3:-14720680 MS.gene88334:intron
TAATACAAAGGGGTTCGGAA+CGG 0.611143 5.3:-14716685 MS.gene88334:CDS
AGCGGCACAACTAGCTGACA+TGG 0.615089 5.3:-14717816 MS.gene88334:CDS
GGGTAATTATCCCATTGGAA+GGG 0.617953 5.3:-14720144 MS.gene88334:CDS
CATGGAATCACTTTATAAGG+AGG 0.619061 5.3:-14717798 MS.gene88334:CDS
AAGCTGTTGAAGATTCTCAA+AGG 0.619492 5.3:-14718991 MS.gene88334:CDS
ACTCTGAATTGGCTGTGTTG+AGG 0.627825 5.3:-14718025 MS.gene88334:CDS
TTGGTGCAATCTGCTGTAGA+CGG 0.635380 5.3:-14717290 MS.gene88334:CDS
GCAAGCAGGTAGGAAAGGGG+AGG 0.638885 5.3:-14715996 MS.gene88334:CDS
AACAAACAGCTTCCATACTG+AGG 0.639092 5.3:-14717844 MS.gene88334:CDS
CTGGAATATGTGAAGAACAC+CGG 0.658724 5.3:+14719327 None:intergenic
TTCCATACTGAGGATGCAAG+CGG 0.665060 5.3:-14717834 MS.gene88334:CDS
CTAGTATTATTCGTCCAGGT+AGG 0.667804 5.3:+14719603 None:intergenic
CGGAACGGCGGCATACAGCA+GGG 0.670084 5.3:-14716670 MS.gene88334:CDS
ATAGTGATGTAAGCCTATCA+CGG 0.670229 5.3:+14718740 None:intergenic
GGACGACAATAAACATATCG+GGG 0.674920 5.3:-14720654 MS.gene88334:CDS
GATAGAGGGGATTACCAACA+AGG 0.677171 5.3:-14718539 MS.gene88334:CDS
ATTGGAAGGAGCAAGCAGGT+AGG 0.681367 5.3:-14716006 MS.gene88334:CDS
ACTAGCAATTAACAAGAGAG+GGG 0.684870 5.3:-14719585 MS.gene88334:intron
GAAGCTACTACATTGAATGG+CGG 0.690662 5.3:+14715918 None:intergenic
TTGAATAGAATAATACAAAG+GGG 0.696325 5.3:-14716695 MS.gene88334:CDS
TGAAGATTCTCAAAGGAAGG+CGG 0.698919 5.3:-14718984 MS.gene88334:CDS
AAAAGCTCTGTAGTAGCACG+TGG 0.703244 5.3:+14717179 None:intergenic
ATAAACGACCAACTAAAGAG+CGG 0.727802 5.3:-14715949 MS.gene88334:CDS
ATGTTGATGAGTGATTCACT+TGG 0.730310 5.3:-14716280 MS.gene88334:CDS
TGTGTCGATTTCCACCATGG+AGG 0.747189 5.3:-14716720 MS.gene88334:CDS
CATGGTGGAAATCGACACAG+TGG 0.753570 5.3:+14716724 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGATGTTAAAATAATAT+TGG + chr5.3:14716758-14716777 None:intergenic 10.0%
!! AAATTAAAAGAATTATGAAA+TGG + chr5.3:14719956-14719975 None:intergenic 10.0%
!! AATATATCATCTTAAAATTA+AGG + chr5.3:14718555-14718574 None:intergenic 10.0%
!! AGTTAAAAAAAAAATGAATA+TGG + chr5.3:14720263-14720282 None:intergenic 10.0%
!! TTTAAATATTATAAACAGTT+AGG + chr5.3:14717874-14717893 None:intergenic 10.0%
!!! AAATTTTAAATAGTATAACT+TGG - chr5.3:14720625-14720644 MS.gene88334:CDS 10.0%
!!! TCATAATTCTTTTAATTTTA+TGG - chr5.3:14719958-14719977 MS.gene88334:intron 10.0%
!! AATTGAATAGAATAATACAA+AGG - chr5.3:14720066-14720085 MS.gene88334:intron 15.0%
!! ATAATAAAAACATTGGAATA+TGG - chr5.3:14719090-14719109 MS.gene88334:CDS 15.0%
!! ATGACATAAATTTATATAGA+TGG + chr5.3:14719695-14719714 None:intergenic 15.0%
!! ATTGAATAGAATAATACAAA+GGG - chr5.3:14720067-14720086 MS.gene88334:intron 15.0%
!!! ATTCTTTTAATTTTATGGAT+TGG - chr5.3:14719963-14719982 MS.gene88334:intron 15.0%
!!! TTTTGCTACTTTTTATTTAT+AGG - chr5.3:14718804-14718823 MS.gene88334:CDS 15.0%
!! AAAATGGTAAATTTCAATGA+AGG + chr5.3:14717489-14717508 None:intergenic 20.0%
!! ATTAAAATTGGAGATTAAGA+AGG - chr5.3:14719891-14719910 MS.gene88334:CDS 20.0%
!! ATTGATCATGCAAATTTAAT+AGG - chr5.3:14718143-14718162 MS.gene88334:CDS 20.0%
!! CACATACATAATAAAAACAT+TGG - chr5.3:14719083-14719102 MS.gene88334:CDS 20.0%
!! GTAGAAAATATTGTAAAGTT+TGG + chr5.3:14716798-14716817 None:intergenic 20.0%
!! GTCATAATGATAATATTACA+AGG - chr5.3:14717223-14717242 MS.gene88334:CDS 20.0%
!! TATTCAATCAACATAAATTC+TGG - chr5.3:14718571-14718590 MS.gene88334:CDS 20.0%
!! TCAAATATTTGTATAGGAAA+TGG + chr5.3:14716424-14716443 None:intergenic 20.0%
!! TTGAATAGAATAATACAAAG+GGG - chr5.3:14720068-14720087 MS.gene88334:intron 20.0%
!! TTGTAAAACAAAAGCAAAAA+AGG + chr5.3:14716283-14716302 None:intergenic 20.0%
!!! ATAATTTAGAGTATTACACA+AGG - chr5.3:14717835-14717854 MS.gene88334:CDS 20.0%
!!! ATTTCAATTTTGCTTTATGT+AGG - chr5.3:14718878-14718897 MS.gene88334:intron 20.0%
!!! TGGATATTTTTTTGTTAGAT+TGG - chr5.3:14717545-14717564 MS.gene88334:CDS 20.0%
!!! TTATCTTTTTCAGATATGAA+AGG - chr5.3:14719113-14719132 MS.gene88334:CDS 20.0%
!!! TTTGTTTTACAAGTTTTGTT+TGG - chr5.3:14716291-14716310 MS.gene88334:CDS 20.0%
! AAAAATACAGAAAAGCCATA+AGG + chr5.3:14717107-14717126 None:intergenic 25.0%
! AAATCATGTTGAATAGTTGA+TGG - chr5.3:14717891-14717910 MS.gene88334:intron 25.0%
! AATCAAAACAATAGATTGTC+TGG + chr5.3:14716517-14716536 None:intergenic 25.0%
! AGGCTAAAATGATAGAAAAA+AGG - chr5.3:14718163-14718182 MS.gene88334:intron 25.0%
! ATAATAAGAACACTTCCTTA+TGG - chr5.3:14717089-14717108 MS.gene88334:intron 25.0%
! CATTATAAAGATGAAAACAG+TGG + chr5.3:14718327-14718346 None:intergenic 25.0%
! CTGATCTCAAATATTTGTAT+AGG + chr5.3:14716430-14716449 None:intergenic 25.0%
! CTTCTAATGTTATTATTCAG+AGG - chr5.3:14716073-14716092 MS.gene88334:CDS 25.0%
! TAGTGAAAACTGGAAATAAA+AGG + chr5.3:14716355-14716374 None:intergenic 25.0%
! TATCATCAAACTATTCAACT+TGG + chr5.3:14718208-14718227 None:intergenic 25.0%
! TCTGAAAGAATTAAAAAGTC+AGG - chr5.3:14720336-14720355 MS.gene88334:intron 25.0%
! TGAAAAAGATAATGAACTTC+AGG - chr5.3:14718050-14718069 MS.gene88334:CDS 25.0%
! TTATTAGTGCTTTATCTTCA+GGG - chr5.3:14720424-14720443 MS.gene88334:intron 25.0%
! TTGACAAATGTCTTTCTTTA+CGG - chr5.3:14719768-14719787 MS.gene88334:intron 25.0%
! TTGTAATTACTAGTGAAAAC+TGG + chr5.3:14716365-14716384 None:intergenic 25.0%
!! AAACAACTATTTTGCTTGTT+CGG + chr5.3:14719381-14719400 None:intergenic 25.0%
!! AAGAACTTTTCTTTCATTCA+CGG + chr5.3:14719189-14719208 None:intergenic 25.0%
!! AAGTCTAAGATTCTAATGTA+TGG - chr5.3:14717809-14717828 MS.gene88334:CDS 25.0%
!! CTATACAAATATTTGAGATC+AGG - chr5.3:14716428-14716447 MS.gene88334:CDS 25.0%
!! GAAAAAGTTATTTCGTGAAT+CGG - chr5.3:14716205-14716224 MS.gene88334:CDS 25.0%
!! TTGAATAGTTTGATGATAGA+GGG - chr5.3:14718210-14718229 MS.gene88334:intron 25.0%
!! TTGCAGCATGATTATATTTT+GGG - chr5.3:14716599-14716618 MS.gene88334:CDS 25.0%
!!! AAGAAGTATTTGAAGATACA+AGG - chr5.3:14719306-14719325 MS.gene88334:intron 25.0%
!!! AAGCTGTGATTGTTTATTTT+AGG - chr5.3:14719992-14720011 MS.gene88334:intron 25.0%
!!! AGAAGTATTTGAAGATACAA+GGG - chr5.3:14719307-14719326 MS.gene88334:intron 25.0%
!!! AGCTGTGATTGTTTATTTTA+GGG - chr5.3:14719993-14720012 MS.gene88334:intron 25.0%
!!! CAGAGCTTTTTAGAATTTTA+AGG - chr5.3:14719597-14719616 MS.gene88334:CDS 25.0%
!!! GTTGTTTTATCATTTTTGCA+GGG - chr5.3:14717585-14717604 MS.gene88334:CDS 25.0%
!!! TGATTGTTTATTTTAGGGAA+TGG - chr5.3:14719998-14720017 MS.gene88334:intron 25.0%
!!! TGTTGTTTTATCATTTTTGC+AGG - chr5.3:14717584-14717603 MS.gene88334:CDS 25.0%
!!! TTCGAAGAAATGTTTTTACT+TGG + chr5.3:14720705-14720724 None:intergenic 25.0%
!!! TTTAGAATTTTAAGGAGAGA+TGG - chr5.3:14719605-14719624 MS.gene88334:CDS 25.0%
!!! TTTATTTTAGGGAATGGTAA+CGG - chr5.3:14720004-14720023 MS.gene88334:intron 25.0%
AAAATATCCATCAAGTCCAA+AGG + chr5.3:14717535-14717554 None:intergenic 30.0%
AAATATCCATCAAGTCCAAA+GGG + chr5.3:14717534-14717553 None:intergenic 30.0%
AACAAATCATTATCAGCACT+TGG - chr5.3:14720396-14720415 MS.gene88334:intron 30.0%
AACTTTATGTTCACCTTCTA+TGG + chr5.3:14719021-14719040 None:intergenic 30.0%
AATGATAGAAAAAAGGAGCT+TGG - chr5.3:14718170-14718189 MS.gene88334:intron 30.0%
AGATGTGCTTAAACAAGAAT+TGG - chr5.3:14718685-14718704 MS.gene88334:intron 30.0%
AGATTTGAGAGAAATGAAAG+AGG - chr5.3:14718781-14718800 MS.gene88334:CDS 30.0%
ATACTAGCAATTAACAAGAG+AGG - chr5.3:14717176-14717195 MS.gene88334:CDS 30.0%
ATATATGATCGCGTGTTTAA+CGG - chr5.3:14719269-14719288 MS.gene88334:intron 30.0%
ATCATTTATGTGTGTCTGAA+GGG + chr5.3:14717628-14717647 None:intergenic 30.0%
CAATCAACATAAATTCTGGT+TGG - chr5.3:14718575-14718594 MS.gene88334:CDS 30.0%
CATTTGTCAAATCAAAGTTG+TGG + chr5.3:14719758-14719777 None:intergenic 30.0%
CGATATTTCAATACCATAGA+AGG - chr5.3:14719005-14719024 MS.gene88334:CDS 30.0%
GAATGCAAAGCGATTAAAAT+TGG - chr5.3:14719879-14719898 MS.gene88334:CDS 30.0%
GCTTAAACAAGAATTGGTTA+TGG - chr5.3:14718691-14718710 MS.gene88334:intron 30.0%
GGAAAGACGTTTACAATATA+TGG - chr5.3:14719536-14719555 MS.gene88334:intron 30.0%
GTTATTAGTGCTTTATCTTC+AGG - chr5.3:14720423-14720442 MS.gene88334:intron 30.0%
TACTAGCAATTAACAAGAGA+GGG - chr5.3:14717177-14717196 MS.gene88334:CDS 30.0%
TAGAATAATACAAAGGGGTT+CGG - chr5.3:14720073-14720092 MS.gene88334:CDS 30.0%
TATTAGTGCTTTATCTTCAG+GGG - chr5.3:14720425-14720444 MS.gene88334:intron 30.0%
TATTCTATTCAATTCCTCCA+TGG + chr5.3:14720060-14720079 None:intergenic 30.0%
TGAAGAAATTGGTTGCTTAT+TGG - chr5.3:14720739-14720758 MS.gene88334:intron 30.0%
TGAATTTAAGTCTCCGAATA+TGG - chr5.3:14717716-14717735 MS.gene88334:intron 30.0%
TGACATGGAATCACTTTATA+AGG - chr5.3:14718962-14718981 MS.gene88334:intron 30.0%
TGAGAACTTGAAGAGTAAAA+TGG + chr5.3:14717505-14717524 None:intergenic 30.0%
TTCTCATACGATTCCATATT+CGG + chr5.3:14717732-14717751 None:intergenic 30.0%
TTGAGAGACATAATGCAATT+TGG - chr5.3:14717375-14717394 MS.gene88334:intron 30.0%
TTGGACGACAATAAACATAT+CGG - chr5.3:14716107-14716126 MS.gene88334:intron 30.0%
TTGTTCAATCTGTGATAAGA+TGG - chr5.3:14717010-14717029 MS.gene88334:intron 30.0%
TTTAATCGCTTTGCATTCTT+CGG + chr5.3:14719877-14719896 None:intergenic 30.0%
TTTCTGTGTTTATCAGTGAT+TGG - chr5.3:14716858-14716877 MS.gene88334:intron 30.0%
TTTGCTTTATCATCTTTCCA+TGG + chr5.3:14719242-14719261 None:intergenic 30.0%
! ATTCACAAACATGAGAGTTT+TGG + chr5.3:14720517-14720536 None:intergenic 30.0%
! ATTTTGCAATTGTACCTTCA+AGG + chr5.3:14719648-14719667 None:intergenic 30.0%
! CAAGTTTTCTTTTTCCTTGA+AGG - chr5.3:14719631-14719650 MS.gene88334:CDS 30.0%
! GTTGAATAGTTTGATGATAG+AGG - chr5.3:14718209-14718228 MS.gene88334:intron 30.0%
! GTTGCAGCATGATTATATTT+TGG - chr5.3:14716598-14716617 MS.gene88334:CDS 30.0%
! TATTATTCAGAGGAGTACAT+TGG - chr5.3:14716083-14716102 MS.gene88334:CDS 30.0%
! TGAATAGTTTGATGATAGAG+GGG - chr5.3:14718211-14718230 MS.gene88334:intron 30.0%
! TTGAAGGTACAATTGCAAAA+TGG - chr5.3:14719647-14719666 MS.gene88334:CDS 30.0%
!! ATTTTGGGTAATTATCCCAT+TGG - chr5.3:14716614-14716633 MS.gene88334:CDS 30.0%
!! GTTAACTTGTGATTTCTGTA+AGG + chr5.3:14720462-14720481 None:intergenic 30.0%
!! TGCAAATATTCCTTTGGAAT+GGG + chr5.3:14717345-14717364 None:intergenic 30.0%
!!! AAGATCGTGTTTTGGAATAT+CGG + chr5.3:14717662-14717681 None:intergenic 30.0%
!!! TTTGTTTGGTTTTTCTTCCT+GGG - chr5.3:14716305-14716324 MS.gene88334:CDS 30.0%
!!! TTTTGTTTGGTTTTTCTTCC+TGG - chr5.3:14716304-14716323 MS.gene88334:CDS 30.0%
!!! TTTTTTAAAATGCGAGTTGC+CGG - chr5.3:14717417-14717436 MS.gene88334:intron 30.0%
AAAACAATAGATTGTCTGGC+TGG + chr5.3:14716513-14716532 None:intergenic 35.0%
AAATCATCTGATTCTGGCAA+TGG - chr5.3:14715985-14716004 MS.gene88334:CDS 35.0%
AACTTCTGCAAGACTATTCT+TGG + chr5.3:14717995-14718014 None:intergenic 35.0%
AAGCTGTTGAAGATTCTCAA+AGG - chr5.3:14717772-14717791 MS.gene88334:CDS 35.0%
AAGTTCTCAATCTTTCCCTT+TGG - chr5.3:14717516-14717535 MS.gene88334:CDS 35.0%
AATGTTTGCGTATTTGCCTA+TGG - chr5.3:14719500-14719519 MS.gene88334:intron 35.0%
AATTAAAAAGTCAGGCTCTG+AGG - chr5.3:14720344-14720363 MS.gene88334:intron 35.0%
ACAAATCAATACCTTGAAGC+AGG + chr5.3:14716555-14716574 None:intergenic 35.0%
ACCGTAAAAGAACGAAGTAA+GGG - chr5.3:14716152-14716171 MS.gene88334:intron 35.0%
ACTAGCAATTAACAAGAGAG+GGG - chr5.3:14717178-14717197 MS.gene88334:CDS 35.0%
ACTTTGTAGAGATGAGCTTA+TGG - chr5.3:14718400-14718419 MS.gene88334:intron 35.0%
ATAAACGACCAACTAAAGAG+CGG - chr5.3:14720814-14720833 MS.gene88334:CDS 35.0%
ATAGTGATGTAAGCCTATCA+CGG + chr5.3:14718026-14718045 None:intergenic 35.0%
ATTACCAACAAGGACTCTAT+TGG - chr5.3:14718234-14718253 MS.gene88334:intron 35.0%
ATTAGTGCTTTATCTTCAGG+GGG - chr5.3:14720426-14720445 MS.gene88334:intron 35.0%
ATTGCTAGTATTATTCGTCC+AGG + chr5.3:14717167-14717186 None:intergenic 35.0%
CATCATTTATGTGTGTCTGA+AGG + chr5.3:14717629-14717648 None:intergenic 35.0%
CATGGAATCACTTTATAAGG+AGG - chr5.3:14718965-14718984 MS.gene88334:intron 35.0%
CTCATTTGTCAAGCATTTGA+TGG + chr5.3:14718438-14718457 None:intergenic 35.0%
CTTTCAAGCCTTCTAATTCT+TGG + chr5.3:14717957-14717976 None:intergenic 35.0%
GAAATTCACAATGCAGTACT+TGG - chr5.3:14719454-14719473 MS.gene88334:intron 35.0%
GAAATTGGTTGCTTATTGGA+AGG - chr5.3:14720743-14720762 MS.gene88334:intron 35.0%
GAAGAGGTAAAATAGCATGT+TGG - chr5.3:14718506-14718525 MS.gene88334:intron 35.0%
TCTTTATCCAAAGAACCTGT+AGG + chr5.3:14717687-14717706 None:intergenic 35.0%
TGAACATTCAAAGTCACCTA+CGG + chr5.3:14716716-14716735 None:intergenic 35.0%
TGAGAAGAAGAATACTGAAG+AGG - chr5.3:14718490-14718509 MS.gene88334:intron 35.0%
TGGACGACAATAAACATATC+GGG - chr5.3:14716108-14716127 MS.gene88334:intron 35.0%
TGTTGAAGATTCTCAAAGGA+AGG - chr5.3:14717776-14717795 MS.gene88334:CDS 35.0%
TTGTGACATTCTCCTGAAAA+GGG + chr5.3:14717040-14717059 None:intergenic 35.0%
TTTGTGACATTCTCCTGAAA+AGG + chr5.3:14717041-14717060 None:intergenic 35.0%
! AAAAAGGCATACTTGTACGT+AGG + chr5.3:14716267-14716286 None:intergenic 35.0%
! ATGTTGATGAGTGATTCACT+TGG - chr5.3:14720483-14720502 MS.gene88334:intron 35.0%
! ATTAAAAAGTCAGGCTCTGA+GGG - chr5.3:14720345-14720364 MS.gene88334:intron 35.0%
! CGCAAAATTGATGATCCTAT+TGG - chr5.3:14717134-14717153 MS.gene88334:CDS 35.0%
! GTGCAAATATTCCTTTGGAA+TGG + chr5.3:14717346-14717365 None:intergenic 35.0%
! TATTATGCAGCTGAGTTTTG+TGG - chr5.3:14720302-14720321 MS.gene88334:intron 35.0%
! TCCCTTACTTCGTTCTTTTA+CGG + chr5.3:14716156-14716175 None:intergenic 35.0%
! TCGTTACTGAGTCTTTCTTT+TGG - chr5.3:14719432-14719451 MS.gene88334:CDS 35.0%
! TCTTTCTTGCTATCATTCAC+TGG - chr5.3:14716955-14716974 MS.gene88334:intron 35.0%
! TCTTTTTGTGTTTACGATGC+AGG - chr5.3:14719804-14719823 MS.gene88334:intron 35.0%
!! GCAACAGAAAGTATCTTACT+CGG + chr5.3:14718269-14718288 None:intergenic 35.0%
!! GCTTCAAGGTATTGATTTGT+TGG - chr5.3:14716555-14716574 MS.gene88334:intron 35.0%
!! TAAGATGGATTTCCCTTTTC+AGG - chr5.3:14717025-14717044 MS.gene88334:intron 35.0%
!!! GCACATCTAGTTTTCTTTCA+AGG + chr5.3:14718673-14718692 None:intergenic 35.0%
!!! TTTTTTTCGTCCCATTCCAA+AGG - chr5.3:14717332-14717351 MS.gene88334:intron 35.0%
AAAACACGATCTTCTCCTAC+AGG - chr5.3:14717669-14717688 MS.gene88334:intron 40.0%
AACAAACAGCTTCCATACTG+AGG - chr5.3:14718919-14718938 MS.gene88334:intron 40.0%
AAGTTACGAATGACCGTGAT+AGG - chr5.3:14718010-14718029 MS.gene88334:CDS 40.0%
ACATATCGGGGATCTATTAG+CGG - chr5.3:14716121-14716140 MS.gene88334:intron 40.0%
AGCGCTAAATCATCTGATTC+TGG - chr5.3:14715979-14715998 MS.gene88334:CDS 40.0%
AGGTGTTAACAATACCTGCT+TGG + chr5.3:14717469-14717488 None:intergenic 40.0%
AGTTTACTGTTGAGCATCCA+TGG - chr5.3:14719222-14719241 MS.gene88334:intron 40.0%
ATACCTGCTTGGTTTCAAAC+TGG + chr5.3:14717458-14717477 None:intergenic 40.0%
ATCACTTTATAAGGAGGAGC+AGG - chr5.3:14718971-14718990 MS.gene88334:intron 40.0%
ATCTCCAGTAGAATCAAGCT+TGG - chr5.3:14720539-14720558 MS.gene88334:CDS 40.0%
ATCTGATTCTGGCAATGGTA+TGG - chr5.3:14715990-14716009 MS.gene88334:CDS 40.0%
ATCTTCTCCTACAGGTTCTT+TGG - chr5.3:14717677-14717696 MS.gene88334:intron 40.0%
ATCTTTCCCTTTGGACTTGA+TGG - chr5.3:14717525-14717544 MS.gene88334:CDS 40.0%
CAACGCCTATTAGGTAACAT+CGG + chr5.3:14718357-14718376 None:intergenic 40.0%
CGAGAAGCAAATACAAGAAG+AGG - chr5.3:14717924-14717943 MS.gene88334:intron 40.0%
CTAGTATTATTCGTCCAGGT+AGG + chr5.3:14717163-14717182 None:intergenic 40.0%
CTGGAATATGTGAAGAACAC+CGG + chr5.3:14717439-14717458 None:intergenic 40.0%
GAACATTCAAAGTCACCTAC+GGG + chr5.3:14716715-14716734 None:intergenic 40.0%
GACCGTAAAAGAACGAAGTA+AGG - chr5.3:14716151-14716170 MS.gene88334:intron 40.0%
GACTTCCGATGTTACCTAAT+AGG - chr5.3:14718349-14718368 MS.gene88334:CDS 40.0%
GAGACTCTCCAAGAATTAGA+AGG - chr5.3:14717946-14717965 MS.gene88334:intron 40.0%
GCTGAGTGCAAATATTCCTT+TGG + chr5.3:14717351-14717370 None:intergenic 40.0%
GCTTTCTGCATTGCAAATCT+TGG - chr5.3:14716655-14716674 MS.gene88334:CDS 40.0%
GGACGACAATAAACATATCG+GGG - chr5.3:14716109-14716128 MS.gene88334:intron 40.0%
GGAGATTAAGAAGGACTCAA+AGG - chr5.3:14719900-14719919 MS.gene88334:intron 40.0%
GGGTAATTATCCCATTGGAA+GGG - chr5.3:14716619-14716638 MS.gene88334:CDS 40.0%
GTATTTGCCTATGGTCAAAC+TGG - chr5.3:14719509-14719528 MS.gene88334:intron 40.0%
TAATACAAAGGGGTTCGGAA+CGG - chr5.3:14720078-14720097 MS.gene88334:CDS 40.0%
TAGAATTCTGACCTGCTTCA+AGG - chr5.3:14716541-14716560 MS.gene88334:intron 40.0%
TAGGACAACTGCCAAAACAT+AGG + chr5.3:14716248-14716267 None:intergenic 40.0%
TATGGATCCGAAAACAATCC+TGG - chr5.3:14719554-14719573 MS.gene88334:intron 40.0%
TATGGCTGAATCTACACGTT+TGG - chr5.3:14718709-14718728 MS.gene88334:intron 40.0%
TCATCCAAGCTTGATTCTAC+TGG + chr5.3:14720546-14720565 None:intergenic 40.0%
TCTATTCAATTCCTCCATGG+TGG + chr5.3:14720057-14720076 None:intergenic 40.0%
TGAAGATTCTCAAAGGAAGG+CGG - chr5.3:14717779-14717798 MS.gene88334:CDS 40.0%
TGGGTAATTATCCCATTGGA+AGG - chr5.3:14716618-14716637 MS.gene88334:CDS 40.0%
TTGATGAGTGATTCACTTGG+AGG - chr5.3:14720486-14720505 MS.gene88334:intron 40.0%
TTGCAAATCTTGGCTGAGAT+TGG - chr5.3:14716665-14716684 MS.gene88334:CDS 40.0%
! AAGCTTTTGCAACGCCTATT+AGG + chr5.3:14718366-14718385 None:intergenic 40.0%
! AGAAGTTTTGCACTGCAAAC+TGG - chr5.3:14716175-14716194 MS.gene88334:intron 40.0%
! ATTCCAGTTTGAAACCAAGC+AGG - chr5.3:14717452-14717471 MS.gene88334:intron 40.0%
! CTGTGACAGATCCTATGTTT+TGG - chr5.3:14716234-14716253 MS.gene88334:CDS 40.0%
! TGTAGGAGAAGATCGTGTTT+TGG + chr5.3:14717670-14717689 None:intergenic 40.0%
! TTCAGAGGAGTACATTGGTT+TGG - chr5.3:14716088-14716107 MS.gene88334:CDS 40.0%
!! CTAGTCATTGCTATTTGCCT+GGG + chr5.3:14716908-14716927 None:intergenic 40.0%
!! GCAATCTCTTTTTCACCAAG+GGG + chr5.3:14719167-14719186 None:intergenic 40.0%
!! GGCAATCTCTTTTTCACCAA+GGG + chr5.3:14719168-14719187 None:intergenic 40.0%
!! GGTATTGATTTGTTGGTGCT+TGG - chr5.3:14716562-14716581 MS.gene88334:intron 40.0%
!! TCTAGTCATTGCTATTTGCC+TGG + chr5.3:14716909-14716928 None:intergenic 40.0%
!! TTGCAGTTGATTGGCTTTGA+AGG + chr5.3:14720184-14720203 None:intergenic 40.0%
AAAAGCTCTGTAGTAGCACG+TGG + chr5.3:14719587-14719606 None:intergenic 45.0%
ACTCTGAATTGGCTGTGTTG+AGG - chr5.3:14718738-14718757 MS.gene88334:CDS 45.0%
AGCTCCAATAGAGTCCTTGT+TGG + chr5.3:14718241-14718260 None:intergenic 45.0%
CAAAGCCAATCAACTGCAAG+AGG - chr5.3:14720185-14720204 MS.gene88334:intron 45.0%
CCAATCAACTGCAAGAGGAA+AGG - chr5.3:14720190-14720209 MS.gene88334:intron 45.0%
CCTTTCCTCTTGCAGTTGAT+TGG + chr5.3:14720193-14720212 None:intergenic 45.0%
GATAGAGGGGATTACCAACA+AGG - chr5.3:14718224-14718243 MS.gene88334:intron 45.0%
GATCGCTCGACTGAAGAAAT+TGG - chr5.3:14720728-14720747 MS.gene88334:intron 45.0%
GATGCATCTTCCCTTCCAAT+GGG + chr5.3:14716632-14716651 None:intergenic 45.0%
TAGCGCTTGTGACAACTTTG+CGG + chr5.3:14715966-14715985 None:intergenic 45.0%
TGAATCTACACGTTTGGCGA+AGG - chr5.3:14718715-14718734 MS.gene88334:CDS 45.0%
TGATGCATCTTCCCTTCCAA+TGG + chr5.3:14716633-14716652 None:intergenic 45.0%
TTCCATACTGAGGATGCAAG+CGG - chr5.3:14718929-14718948 MS.gene88334:intron 45.0%
TTGGTGCAATCTGCTGTAGA+CGG - chr5.3:14719473-14719492 MS.gene88334:intron 45.0%
TTTGGCGAAGGACTCTGAAT+TGG - chr5.3:14718727-14718746 MS.gene88334:CDS 45.0%
! CGTAAGGCCAGGATTGTTTT+CGG + chr5.3:14719564-14719583 None:intergenic 45.0%
! GCTCTGAACTCTCAAGTACA+TGG - chr5.3:14718647-14718666 MS.gene88334:intron 45.0%
!! CGGCAATCTCTTTTTCACCA+AGG + chr5.3:14719169-14719188 None:intergenic 45.0%
!! CTGAGTTTTGTGGATCTTGC+TGG - chr5.3:14720312-14720331 MS.gene88334:intron 45.0%
!! GGCTGATTTTCACTCCTGTT+AGG - chr5.3:14720646-14720665 MS.gene88334:CDS 45.0%
AAGGAGCAAGCAGGTAGGAA+AGG - chr5.3:14720762-14720781 MS.gene88334:intron 50.0%
AGGAGCAAGCAGGTAGGAAA+GGG - chr5.3:14720763-14720782 MS.gene88334:intron 50.0%
AGTCACCTACGGGCATGATT+CGG + chr5.3:14716705-14716724 None:intergenic 50.0%
ATTGGAAGGAGCAAGCAGGT+AGG - chr5.3:14720757-14720776 MS.gene88334:intron 50.0%
GACTAGAGCTAGACGCGAAT+GGG - chr5.3:14716922-14716941 MS.gene88334:CDS 50.0%
GATCCTATTGGACTCCTACC+TGG - chr5.3:14717146-14717165 MS.gene88334:CDS 50.0%
GCTTATTGGAAGGAGCAAGC+AGG - chr5.3:14720753-14720772 MS.gene88334:intron 50.0%
GGGAAGAAATCGCTCGAGAA+AGG + chr5.3:14716888-14716907 None:intergenic 50.0%
TACGATGCAGGCGTACATGT+TGG - chr5.3:14719816-14719835 MS.gene88334:CDS 50.0%
TCCAGAGCCAGTTTGACCAT+AGG + chr5.3:14719519-14719538 None:intergenic 50.0%
TGACTAGAGCTAGACGCGAA+TGG - chr5.3:14716921-14716940 MS.gene88334:CDS 50.0%
TTCTCGAGCGATTTCTTCCC+AGG - chr5.3:14716888-14716907 MS.gene88334:CDS 50.0%
TTTCTCAAGCTAGACAGCCC+AGG + chr5.3:14716325-14716344 None:intergenic 50.0%
! CATGGTGGAAATCGACACAG+TGG + chr5.3:14720042-14720061 None:intergenic 50.0%
! GGCTGTCTAGCTTGAGAAAG+CGG - chr5.3:14716326-14716345 MS.gene88334:CDS 50.0%
! TACTGTCGTCTAAGACCCCT+TGG - chr5.3:14719149-14719168 MS.gene88334:CDS 50.0%
!! CACTGTGTCGATTTCCACCA+TGG - chr5.3:14720040-14720059 MS.gene88334:intron 50.0%
!! TGTGTCGATTTCCACCATGG+AGG - chr5.3:14720043-14720062 MS.gene88334:intron 50.0%
AAGACCCGAATCATGCCCGT+AGG - chr5.3:14716697-14716716 MS.gene88334:CDS 55.0%
ACACGCGACGCATACCTAAC+AGG + chr5.3:14720663-14720682 None:intergenic 55.0%
AGCGGCACAACTAGCTGACA+TGG - chr5.3:14718947-14718966 MS.gene88334:intron 55.0%
AGCTAGACGCGAATGGGAGT+TGG - chr5.3:14716928-14716947 MS.gene88334:CDS 55.0%
CCAACTAAAGAGCGGAGCGA+TGG - chr5.3:14720822-14720841 MS.gene88334:CDS 55.0%
CCATCGCTCCGCTCTTTAGT+TGG + chr5.3:14720825-14720844 None:intergenic 55.0%
CGTCCAGGTAGGAGTCCAAT+AGG + chr5.3:14717152-14717171 None:intergenic 55.0%
CTGTAGTAGCACGTGGCGTA+AGG + chr5.3:14719580-14719599 None:intergenic 55.0%
GGAGCAAGCAGGTAGGAAAG+GGG - chr5.3:14720764-14720783 MS.gene88334:intron 55.0%
GTCACCTACGGGCATGATTC+GGG + chr5.3:14716704-14716723 None:intergenic 55.0%
TACAAAGGGGTTCGGAACGG+CGG - chr5.3:14720081-14720100 MS.gene88334:CDS 55.0%
TTAGGTATGCGTCGCGTGTG+AGG - chr5.3:14720664-14720683 MS.gene88334:CDS 55.0%
! GCCTATGGTCAAACTGGCTC+TGG - chr5.3:14719515-14719534 MS.gene88334:intron 55.0%
! TGCCGCTTGCATCCTCAGTA+TGG + chr5.3:14718934-14718953 None:intergenic 55.0%
GCAAGCAGGTAGGAAAGGGG+AGG - chr5.3:14720767-14720786 MS.gene88334:intron 60.0%
CGGAACGGCGGCATACAGCA+GGG - chr5.3:14720093-14720112 MS.gene88334:CDS 65.0%
GTAGCACGTGGCGTAAGGCC+AGG + chr5.3:14719575-14719594 None:intergenic 65.0%
TCGGAACGGCGGCATACAGC+AGG - chr5.3:14720092-14720111 MS.gene88334:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 14715925 14720860 14715925 ID=MS.gene88334
chr5.3 mRNA 14715925 14720860 14715925 ID=MS.gene88334.t1;Parent=MS.gene88334
chr5.3 exon 14720779 14720860 14720779 ID=MS.gene88334.t1.exon1;Parent=MS.gene88334.t1
chr5.3 CDS 14720779 14720860 14720779 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14720511 14720692 14720511 ID=MS.gene88334.t1.exon2;Parent=MS.gene88334.t1
chr5.3 CDS 14720511 14720692 14720511 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14720071 14720186 14720071 ID=MS.gene88334.t1.exon3;Parent=MS.gene88334.t1
chr5.3 CDS 14720071 14720186 14720071 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14719809 14719911 14719809 ID=MS.gene88334.t1.exon4;Parent=MS.gene88334.t1
chr5.3 CDS 14719809 14719911 14719809 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14719586 14719738 14719586 ID=MS.gene88334.t1.exon5;Parent=MS.gene88334.t1
chr5.3 CDS 14719586 14719738 14719586 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14719312 14719458 14719312 ID=MS.gene88334.t1.exon6;Parent=MS.gene88334.t1
chr5.3 CDS 14719312 14719458 14719312 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14718979 14719179 14718979 ID=MS.gene88334.t1.exon7;Parent=MS.gene88334.t1
chr5.3 CDS 14718979 14719179 14718979 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14718714 14718878 14718714 ID=MS.gene88334.t1.exon8;Parent=MS.gene88334.t1
chr5.3 CDS 14718714 14718878 14718714 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14718516 14718620 14718516 ID=MS.gene88334.t1.exon9;Parent=MS.gene88334.t1
chr5.3 CDS 14718516 14718620 14718516 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14718274 14718414 14718274 ID=MS.gene88334.t1.exon10;Parent=MS.gene88334.t1
chr5.3 CDS 14718274 14718414 14718274 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14717983 14718177 14717983 ID=MS.gene88334.t1.exon11;Parent=MS.gene88334.t1
chr5.3 CDS 14717983 14718177 14717983 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14717759 14717885 14717759 ID=MS.gene88334.t1.exon12;Parent=MS.gene88334.t1
chr5.3 CDS 14717759 14717885 14717759 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14717475 14717659 14717475 ID=MS.gene88334.t1.exon13;Parent=MS.gene88334.t1
chr5.3 CDS 14717475 14717659 14717475 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14717133 14717315 14717133 ID=MS.gene88334.t1.exon14;Parent=MS.gene88334.t1
chr5.3 CDS 14717133 14717315 14717133 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14716864 14716959 14716864 ID=MS.gene88334.t1.exon15;Parent=MS.gene88334.t1
chr5.3 CDS 14716864 14716959 14716864 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14716574 14716771 14716574 ID=MS.gene88334.t1.exon16;Parent=MS.gene88334.t1
chr5.3 CDS 14716574 14716771 14716574 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14716202 14716473 14716202 ID=MS.gene88334.t1.exon17;Parent=MS.gene88334.t1
chr5.3 CDS 14716202 14716473 14716202 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
chr5.3 exon 14715925 14716117 14715925 ID=MS.gene88334.t1.exon18;Parent=MS.gene88334.t1
chr5.3 CDS 14715925 14716117 14715925 ID=cds.MS.gene88334.t1;Parent=MS.gene88334.t1
Gene Sequence

>MS.gene88334

ATGAAGAAACGTAAATCTAGGAGTGTTTTGTACGAATGCCGCAAAGTTGTCACAAGCGCTAAATCATCTGATTCTGGCAATGGTATGGCTTTTTCACTTCTTGCTTGTGAATATTATTAAATTAGCTGAGATCAGTAGTATAACAAGTCTTCTAATGTTATTATTCAGAGGAGTACATTGGTTTGGACGACAATAAACATATCGGGGATCTATTAGCGGAATTTAAGACCGTAAAAGAACGAAGTAAGGGAGAAGTTTTGCACTGCAAACTGGTCTTCAAGAAAAAGTTATTTCGTGAATCGGATGAAGCTGTGACAGATCCTATGTTTTGGCAGTTGTCCTACGTACAAGTATGCCTTTTTTGCTTTTGTTTTACAAGTTTTGTTTGGTTTTTCTTCCTGGGCTGTCTAGCTTGAGAAAGCGGTTTCCTTTTATTTCCAGTTTTCACTAGTAATTACAAAAATGTCACTTTTTTTTTTATCTTTCTACTTTGTTACCATTTCCTATACAAATATTTGAGATCAGGAAATAAGTGAAAAAAATGTTACATTTTTTAATTATGAGTGAAACTAGAAAATGTTTTCTCCAGCCAGACAATCTATTGTTTTGATTTGAATAGAATTCTGACCTGCTTCAAGGTATTGATTTGTTGGTGCTTGGATACTTATTTACAGTTGCAGCATGATTATATTTTGGGTAATTATCCCATTGGAAGGGAAGATGCATCAAAGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCCGAATCATGCCCGTAGGTGACTTTGAATGTTCATCTTGCTAGAAACTATGTTCCAATATTATTTTAACATCTTTTGATCGATTTTACTGTGACCAAACTTTACAATATTTTCTACTTTCTATGATCTATTATATTATGACTGCAACTGACTGTGATTTCTGTGTTTATCAGTGATTGGAATTCCTTTCTCGAGCGATTTCTTCCCAGGCAAATAGCAATGACTAGAGCTAGACGCGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGGTATAAGAGCTTAACTTCATCTGATTGTTTTTCTTGTTCAATCTGTGATAAGATGGATTTCCCTTTTCAGGAGAATGTCACAAAAGATGATGCAAGACAACAGTTTCTGCATATAATAAGAACACTTCCTTATGGCTTTTCTGTATTTTTTAATGTTCGCAAAATTGATGATCCTATTGGACTCCTACCTGGACGAATAATACTAGCAATTAACAAGAGAGGGGTAAGATTCAAAACTGATTTAACGTCATAATGATAATATTACAAGGTTTATTATAATTTACATGTAATAGAACACTGAATTGTACTTTTAATTAATTAAATGTTTGTTTCTGATCAATTTTCTATAGATTCATTTTTTTCGTCCCATTCCAAAGGAATATTTGCACTCAGCTGAATTGAGAGACATAATGCAATTTGGAAGCAGTAACACTGCTGTATTTTTTAAAATGCGAGTTGCCGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGTATTGTTAACACCTTCATTGAAATTTACCATTTTACTCTTCAAGTTCTCAATCTTTCCCTTTGGACTTGATGGATATTTTTTTGTTAGATTGGAGTTATTTTATATCATTGTTGTTTTATCATTTTTGCAGGGAGAAGAAATTTGTGTAGCCCTTCAGACACACATAAATGATGTAATGCTGCGCCGATATTCCAAAACACGATCTTCTCCTACAGGTTCTTTGGATAAAGAAATTTCTACTGAATTTAAGTCTCCGAATATGGAATCGTATGAGAAACGTGTTCAAGATTTAACAAAAGCTGTTGAAGATTCTCAAAGGAAGGCGGATCAAGTAAGTCTAAGATTCTAATGTATGGTATATAATTTAGAGTATTACACAAGGTGTAGAACAAGCACCTAACTGTTTATAATATTTAAATCATGTTGAATAGTTGATGGAAAAATTGCACGAGAAGCAAATACAAGAAGAGGAGACTCTCCAAGAATTAGAAGGCTTGAAAGAATCTTTAGAAACTTCCAAGAATAGTCTTGCAGAAGTTACGAATGACCGTGATAGGCTTACATCACTATGCAGTGAAAAAGATAATGAACTTCAGGTAGAACTTTTGACTCTTGATAACTTCATCGTACGAGTCTCATTTTTATCTTTGCAATACTAACTTTTCTTATTGATCATGCAAATTTAATAGGCTAAAATGATAGAAAAAAGGAGCTTGGAAGCAAAGATAGCCAAGTTGAATAGTTTGATGATAGAGGGGATTACCAACAAGGACTCTATTGGAGCTAACGACCGAGTAAGATACTTTCTGTTGCTGATATTGATTTTTTCTTTTTCTTTTGCTGATCAACCACTGTTTTCATCTTTATAATGTTGACTTCCGATGTTACCTAATAGGCGTTGCAAAAGCTTGAAGATGACTTGAGACTTTGTAGAGATGAGCTTATGGCAGCTGAAGAGACCATCAAATGCTTGACAAATGAGAAGTTAGTTTTGAGACAAAAGATATCTGAGCTTGAGAAGAAGAATACTGAAGAGGTAAAATAGCATGTTGGAACTAGATATATAAATTTAAAAGCCTTAATTTTAAGATGATATATTCAATCAACATAAATTCTGGTTGGTGTGACGCAGATTAATTATGTTCAACGAAAACTTGAACAAGAACGCAAAGCTCTGAACTCTCAAGTACATGGCCTTGAAAGAAAACTAGATGTGCTTAAACAAGAATTGGTTATGGCTGAATCTACACGTTTGGCGAAGGACTCTGAATTGGCTGTGTTGAGGAACAATTTAAAAGAACTAGAAGATTTGAGAGAAATGAAAGAGGTTTTGCTACTTTTTATTTATAGGTTCAACATGTTCACTTTATTTGCGTCAAGTACAAAGTAATTTCATTTATCAATTTCAATTTTGCTTTATGTAGGACATTGACAGAAAGAATGAACAAACAGCTTCCATACTGAGGATGCAAGCGGCACAACTAGCTGACATGGAATCACTTTATAAGGAGGAGCAGGTTCTCAGAAAGCGATATTTCAATACCATAGAAGGTGAACATAAAGTTTAATGTCTATGTGAATGTGTATATATATTTACATATATAACTCACATACATAATAAAAACATTGGAATATGGTTATCTTTTTCAGATATGAAAGGAAAAATACGAGTTTACTGTCGTCTAAGACCCCTTGGTGAAAAAGAGATTGCCGTGAATGAAAGAAAAGTTCTTACTTTTGTAGACGAGTTTACTGTTGAGCATCCATGGAAAGATGATAAAGCAAAGCAACACATATATGATCGCGTGTTTAACGGCAATGCAACTCAAGAAGAAGTATTTGAAGATACAAGGGCAAGTCTTAGCATAACTACTAAGAAATAATAGTTGTTTACTTTTTTTTCCGAACAAGCAAAATAGTTGTTTACATTGAAATAGATTTAACATTTTCTTATGCTCGTTACTGAGTCTTTCTTTTGGAAATTCACAATGCAGTACTTGGTGCAATCTGCTGTAGACGGTTATAATGTTTGCGTATTTGCCTATGGTCAAACTGGCTCTGGAAAGACGTTTACAATATATGGATCCGAAAACAATCCTGGCCTTACGCCACGTGCTACTACAGAGCTTTTTAGAATTTTAAGGAGAGATGGTAACAAGTTTTCTTTTTCCTTGAAGGTACAATTGCAAAATGGAGCTTGATAAACATTTGTCTATCCATCTATATAAATTTATGTCATTAAATACATTTAATGCACACACAATTGTTGAGTAAATTAACCACAACTTTGATTTGACAAATGTCTTTCTTTACGGTTTGATGTAAACTTCTTTTTGTGTTTACGATGCAGGCGTACATGTTGGAATTATATCAAGATACACTTGTAGATCTCTTGTTGCCGAAGAATGCAAAGCGATTAAAATTGGAGATTAAGAAGGACTCAAAGGTTACTCATTATTTTTGTGATTGTAATTTTTCCATTTCATAATTCTTTTAATTTTATGGATTGGTCTCTCAAGCTGTGATTGTTTATTTTAGGGAATGGTAACGGTAGAAAACGCAACCACTGTGTCGATTTCCACCATGGAGGAATTGAATAGAATAATACAAAGGGGTTCGGAACGGCGGCATACAGCAGGGACACAAATGAATGAAGAAAGCTCAAGATCTCATCTTATACTATCAATTGTAATCGAAAGTGTCAACCTTCAAAGCCAATCAACTGCAAGAGGAAAGGTATTCATTGTCTTATATCTATGAATATCTTTATATATGCAACTTATACCATATTCATTTTTTTTTTAACTATTTGAAACATGAACATTTTATTATGCAGCTGAGTTTTGTGGATCTTGCTGGCTCTGAAAGAATTAAAAAGTCAGGCTCTGAGGGTAGTCAATTGAAAGAAGCTCAAAGTATAAACAAATCATTATCAGCACTTGGAGATGTTATTAGTGCTTTATCTTCAGGGGGTCAACACATACCTTACAGAAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGAGGCAACGCCAAAACTCTCATGTTTGTGAATGTATCTCCAGTAGAATCAAGCTTGGATGAGACGCATAACTCTCTTATGTATGTTATCTCTTTTCTGAACTTATAAATGTTTGACTTTCAAATTTTAAATAGTATAACTTGGCTGATTTTCACTCCTGTTAGGTATGCGTCGCGTGTGAGGTCAATTGTGAATGATCCAAGTAAAAACATTTCTTCGAAAGAGATCGCTCGACTGAAGAAATTGGTTGCTTATTGGAAGGAGCAAGCAGGTAGGAAAGGGGAGGATGAAGATTTAGAAGAAATTCAAGATAAACGACCAACTAAAGAGCGGAGCGATGGCCGCCATTCAATGTAG
Protein sequence

>MS.gene88334.t1

MKKRKSRSVLYECRKVVTSAKSSDSGNEEYIGLDDNKHIGDLLAEFKTVKERSKGEVLHCKLVFKKKLFRESDEAVTDPMFWQLSYVQLQHDYILGNYPIGREDASKLSALQILAEIGFVRRPESCPDWNSFLERFLPRQIAMTRARREWELDILSCYHSLENVTKDDARQQFLHIIRTLPYGFSVFFNVRKIDDPIGLLPGRIILAINKRGIHFFRPIPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKTRSSPTGSLDKEISTEFKSPNMESYEKRVQDLTKAVEDSQRKADQLMEKLHEKQIQEEETLQELEGLKESLETSKNSLAEVTNDRDRLTSLCSEKDNELQAKMIEKRSLEAKIAKLNSLMIEGITNKDSIGANDRALQKLEDDLRLCRDELMAAEETIKCLTNEKLVLRQKISELEKKNTEEINYVQRKLEQERKALNSQVHGLERKLDVLKQELVMAESTRLAKDSELAVLRNNLKELEDLREMKEDIDRKNEQTASILRMQAAQLADMESLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLGEKEIAVNERKVLTFVDEFTVEHPWKDDKAKQHIYDRVFNGNATQEEYLVQSAVDGYNVCVFAYGQTGSGKTFTIYGSENNPGLTPRATTELFRILRRDGNKFSFSLKAYMLELYQDTLVDLLLPKNAKRLKLEIKKDSKGMVTVENATTVSISTMEELNRIIQRGSERRHTAGTQMNEESSRSHLILSIVIESVNLQSQSTARGKLSFVDLAGSERIKKSGSEGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIVNDPSKNISSKEIARLKKLVAYWKEQAGRKGEDEDLEEIQDKRPTKERSDGRHSM