Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88610.t1 | XP_013466911.1 | 98 | 354 | 7 | 0 | 1 | 354 | 99 | 452 | 2.20E-203 | 718 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88610.t1 | Q99JW2 | 45.6 | 342 | 167 | 6 | 1 | 340 | 76 | 400 | 1.4e-81 | 304.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88610.t1 | A0A072VH72 | 98.0 | 354 | 7 | 0 | 1 | 354 | 99 | 452 | 1.6e-203 | 718.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene88610 | MS.gene94073 | PPI |
| MS.gene99939 | MS.gene88610 | PPI |
| MS.gene053778 | MS.gene88610 | PPI |
| MS.gene88610 | MS.gene65894 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88610.t1 | MTR_1g038920 | 98.023 | 354 | 7 | 0 | 1 | 354 | 99 | 452 | 0.0 | 725 |
| MS.gene88610.t1 | MTR_1g038920 | 97.175 | 354 | 7 | 1 | 1 | 354 | 99 | 449 | 0.0 | 713 |
| MS.gene88610.t1 | MTR_1g039010 | 87.006 | 354 | 43 | 1 | 1 | 354 | 96 | 446 | 0.0 | 646 |
| MS.gene88610.t1 | MTR_5g058430 | 56.325 | 332 | 142 | 1 | 1 | 332 | 13 | 341 | 2.20e-137 | 395 |
| MS.gene88610.t1 | MTR_0400s0010 | 98.870 | 177 | 2 | 0 | 141 | 317 | 1 | 177 | 1.99e-127 | 363 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88610.t1 | AT4G38220 | 74.294 | 354 | 83 | 2 | 1 | 354 | 88 | 433 | 0.0 | 543 |
| MS.gene88610.t1 | AT4G38220 | 73.446 | 354 | 83 | 3 | 1 | 354 | 88 | 430 | 0.0 | 532 |
| MS.gene88610.t1 | AT1G44180 | 57.310 | 342 | 143 | 1 | 1 | 342 | 95 | 433 | 4.64e-152 | 435 |
| MS.gene88610.t1 | AT1G44180 | 57.310 | 342 | 143 | 1 | 1 | 342 | 95 | 433 | 4.64e-152 | 435 |
| MS.gene88610.t1 | AT1G44180 | 57.310 | 342 | 143 | 1 | 1 | 342 | 95 | 433 | 4.64e-152 | 435 |
| MS.gene88610.t1 | AT1G44820 | 55.848 | 342 | 148 | 1 | 1 | 342 | 93 | 431 | 4.55e-148 | 425 |
Find 105 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTAAGAGGAATGTTTATT+TGG | 0.193171 | 1.4:+23668712 | MS.gene88610:CDS |
| GTTGCCGCAATATGTCTTTC+AGG | 0.272688 | 1.4:+23670552 | MS.gene88610:CDS |
| GGCTGGTGATCAAAGCTGTT+GGG | 0.279776 | 1.4:+23669783 | MS.gene88610:CDS |
| CTTCTCCGGATGAGCATTAC+AGG | 0.286955 | 1.4:+23669732 | MS.gene88610:CDS |
| TTTGGTGATGACTGGTTTCC+CGG | 0.303974 | 1.4:-23671256 | None:intergenic |
| ACCAAATAAACATTCCTCTT+AGG | 0.347870 | 1.4:-23668713 | None:intergenic |
| ATCAAAGCTGTTGGGGCCCC+TGG | 0.353618 | 1.4:+23669791 | MS.gene88610:CDS |
| CGTGTTGGATTGCCTGCTAT+TGG | 0.355347 | 1.4:+23671393 | MS.gene88610:CDS |
| CTGTCTGTGCTTGATGCGTC+CGG | 0.371317 | 1.4:+23671237 | MS.gene88610:CDS |
| CTTGATCAAGGCCGGCTTGA+AGG | 0.382373 | 1.4:+23669904 | MS.gene88610:CDS |
| GGGATTGGAACTGTCAGTTT+TGG | 0.383485 | 1.4:-23671274 | None:intergenic |
| CTGTTAGGATTCTTAAAAGT+TGG | 0.386826 | 1.4:+23668681 | MS.gene88610:CDS |
| ACTAACAGGGCTGGCTTCTC+CGG | 0.389659 | 1.4:+23669718 | MS.gene88610:intron |
| TTTGCTCCTGATGAGGAGAT+TGG | 0.412203 | 1.4:+23668737 | MS.gene88610:CDS |
| CAAGTTTCCCACCAGCCTCT+TGG | 0.413037 | 1.4:-23671323 | None:intergenic |
| TGTTAGGATTCTTAAAAGTT+GGG | 0.416087 | 1.4:+23668682 | MS.gene88610:CDS |
| TAAAGCTTGGAGCCATGTCC+AGG | 0.418147 | 1.4:-23669809 | None:intergenic |
| CAAGAGGCTGGTGGGAAACT+TGG | 0.430179 | 1.4:+23671324 | MS.gene88610:CDS |
| TGGAGTTCCAGCCTTCAAAA+AGG | 0.433167 | 1.4:-23669957 | None:intergenic |
| TGCAGTATCTTGAAGCTGTT+AGG | 0.436357 | 1.4:+23668666 | MS.gene88610:CDS |
| CAGCCATCTGAAGCAGAAGC+TGG | 0.440378 | 1.4:+23670455 | MS.gene88610:CDS |
| GCTGTTGGGGCCCCTGGACA+TGG | 0.446303 | 1.4:+23669797 | MS.gene88610:CDS |
| TTGTGGTCATGGAGTAGAAT+AGG | 0.455956 | 1.4:-23671438 | None:intergenic |
| TAACAATCCCCACCAGGGAT+TGG | 0.458968 | 1.4:-23671289 | None:intergenic |
| AGCAGAGTTGTCATAAAGCT+TGG | 0.472153 | 1.4:-23669822 | None:intergenic |
| TGCTATTGGATTCTCACCTA+TGG | 0.472403 | 1.4:+23671407 | MS.gene88610:CDS |
| TGACCACCAATCTCCTCATC+AGG | 0.479072 | 1.4:-23668743 | None:intergenic |
| ACAAAGATGAATACTTGAAA+GGG | 0.479424 | 1.4:+23672402 | MS.gene88610:CDS |
| TTGCCGCAATATGTCTTTCA+GGG | 0.484195 | 1.4:+23670553 | MS.gene88610:CDS |
| CAGTTTGACTTGATCAAGGC+CGG | 0.486990 | 1.4:+23669896 | MS.gene88610:CDS |
| TGGCTGGTGATCAAAGCTGT+TGG | 0.491367 | 1.4:+23669782 | MS.gene88610:CDS |
| AAATCACCTCATTGTGGTCA+TGG | 0.491849 | 1.4:-23671449 | None:intergenic |
| CTCACAGTTTGACTTGATCA+AGG | 0.494700 | 1.4:+23669892 | MS.gene88610:CDS |
| AATGCCCTGTAATGCTCATC+CGG | 0.497131 | 1.4:-23669737 | None:intergenic |
| GCAACTAGGTGCCCACTCTT+CGG | 0.499636 | 1.4:-23670534 | None:intergenic |
| CACAAAGATGAATACTTGAA+AGG | 0.501698 | 1.4:+23672401 | MS.gene88610:CDS |
| GAAAATGCTGTCCAAGAGGC+TGG | 0.508612 | 1.4:+23671312 | MS.gene88610:CDS |
| GATTTATGCAAGAGGGTCAC+AGG | 0.512669 | 1.4:+23668625 | MS.gene88610:CDS |
| GTGGGTCCATGATCCTTTCA+AGG | 0.516268 | 1.4:+23668580 | MS.gene88610:CDS |
| ACCCACTTATCATGCTCAGC+GGG | 0.520523 | 1.4:-23668563 | None:intergenic |
| GCTGGTGATCAAAGCTGTTG+GGG | 0.520687 | 1.4:+23669784 | MS.gene88610:CDS |
| GCTTTATGACAACTCTGCTA+TGG | 0.522983 | 1.4:+23669826 | MS.gene88610:CDS |
| TCATCCACACGGGCCTTGAA+AGG | 0.535559 | 1.4:-23668593 | None:intergenic |
| CACGGGCCTTGAAAGGATCA+TGG | 0.538749 | 1.4:-23668586 | None:intergenic |
| AATGATTCTGCATCAGCGGT+TGG | 0.539171 | 1.4:-23670497 | None:intergenic |
| TGGTGGGAAACTTGGTAAGC+CGG | 0.540180 | 1.4:+23671332 | MS.gene88610:CDS |
| GTTTGACTTACAGTTGGAGA+TGG | 0.540260 | 1.4:-23669977 | None:intergenic |
| AGAGAGGAGCCCATGGTGGC+TGG | 0.540557 | 1.4:+23669766 | MS.gene88610:CDS |
| GCTCCTGATGAGGAGATTGG+TGG | 0.541895 | 1.4:+23668740 | MS.gene88610:CDS |
| TGTCTGTGCTTGATGCGTCC+GGG | 0.541941 | 1.4:+23671238 | MS.gene88610:CDS |
| ATCTCTTACATGTTCATCGA+AGG | 0.542998 | 1.4:-23672462 | None:intergenic |
| GGCCGGCTTGAAGGCTGAAG+GGG | 0.544594 | 1.4:+23669913 | MS.gene88610:CDS |
| GTGGAAGCAGGAAAGATCTC+CGG | 0.545776 | 1.4:-23671351 | None:intergenic |
| TAGCGTGCATCTGTGGAAGC+AGG | 0.546751 | 1.4:-23671363 | None:intergenic |
| GCACGCTATTTCCGCCGTGT+TGG | 0.549497 | 1.4:+23671378 | MS.gene88610:CDS |
| TTCGATGAACATGTAAGAGA+TGG | 0.556265 | 1.4:+23672464 | MS.gene88610:CDS |
| GAGGAGATTGGTGGTCATGA+TGG | 0.557016 | 1.4:+23668749 | MS.gene88610:CDS |
| CTCTAATGATTCTGCATCAG+CGG | 0.561783 | 1.4:-23670501 | None:intergenic |
| GGATGTTGTTTCTATTAACA+TGG | 0.563003 | 1.4:+23669934 | MS.gene88610:CDS |
| AATCCAGCTTCTGCTTCAGA+TGG | 0.575529 | 1.4:-23670458 | None:intergenic |
| AGGCCGGCTTGAAGGCTGAA+GGG | 0.576200 | 1.4:+23669912 | MS.gene88610:CDS |
| GTTGGTATAGTGCTAGATGA+AGG | 0.577641 | 1.4:+23668815 | MS.gene88610:CDS |
| AAAGACATATTGCGGCAACT+AGG | 0.577793 | 1.4:-23670548 | None:intergenic |
| AAACTGACAGTTCCAATCCC+TGG | 0.578875 | 1.4:+23671277 | MS.gene88610:CDS |
| GCGGAAATAGCGTGCATCTG+TGG | 0.578906 | 1.4:-23671370 | None:intergenic |
| AAGGCCCGTGTGGATGATGA+AGG | 0.580531 | 1.4:+23668599 | MS.gene88610:CDS |
| ATAGGTGAGAATCCAATAGC+AGG | 0.581430 | 1.4:-23671405 | None:intergenic |
| GCTCTACTCTCACACTGATG+TGG | 0.583803 | 1.4:+23668538 | MS.gene88610:CDS |
| AGAATAGGAGTGTTTGCCAT+AGG | 0.586699 | 1.4:-23671423 | None:intergenic |
| TCCCCGCTGAGCATGATAAG+TGG | 0.589749 | 1.4:+23668561 | MS.gene88610:CDS |
| GCTTTGATCACCAGCCACCA+TGG | 0.592222 | 1.4:-23669776 | None:intergenic |
| CCCCGCTGAGCATGATAAGT+GGG | 0.593733 | 1.4:+23668562 | MS.gene88610:CDS |
| AAGGCCGGCTTGAAGGCTGA+AGG | 0.594320 | 1.4:+23669911 | MS.gene88610:CDS |
| GACAGTTCCAATCCCTGGTG+GGG | 0.594707 | 1.4:+23671282 | MS.gene88610:CDS |
| ATCCCCTTCAGCCTTCAAGC+CGG | 0.595969 | 1.4:-23669915 | None:intergenic |
| GATTCTGCATCAGCGGTTGG+TGG | 0.596145 | 1.4:-23670494 | None:intergenic |
| AAAGCTTGGAGCCATGTCCA+GGG | 0.597262 | 1.4:-23669808 | None:intergenic |
| TGACAGTTCCAATCCCTGGT+GGG | 0.600989 | 1.4:+23671281 | MS.gene88610:CDS |
| CTTTGATCACCAGCCACCAT+GGG | 0.602298 | 1.4:-23669775 | None:intergenic |
| TTACCCTGAAAGACATATTG+CGG | 0.602668 | 1.4:-23670556 | None:intergenic |
| GAGGCGAATTGCCGAAGAGT+GGG | 0.609461 | 1.4:+23670523 | MS.gene88610:CDS |
| ATGCTGTCCAAGAGGCTGGT+GGG | 0.609698 | 1.4:+23671316 | MS.gene88610:CDS |
| AGAGTATTGAAAGCATCAGA+AGG | 0.611845 | 1.4:+23669861 | MS.gene88610:CDS |
| CCCGTGTGGATGATGAAGGT+AGG | 0.613895 | 1.4:+23668603 | MS.gene88610:CDS |
| AATGCTGTCCAAGAGGCTGG+TGG | 0.620047 | 1.4:+23671315 | MS.gene88610:CDS |
| AGAGGCGAATTGCCGAAGAG+TGG | 0.624515 | 1.4:+23670522 | MS.gene88610:CDS |
| TCTATGCAGAGAGGAGCCCA+TGG | 0.627664 | 1.4:+23669759 | MS.gene88610:CDS |
| TCCTACCTTCATCATCCACA+CGG | 0.634802 | 1.4:-23668604 | None:intergenic |
| GTTAGAAAATGCTGTCCAAG+AGG | 0.638244 | 1.4:+23671308 | MS.gene88610:CDS |
| AAGGTAGGATTTATGCAAGA+GGG | 0.648002 | 1.4:+23668618 | MS.gene88610:CDS |
| CAATAGCAGGCAATCCAACA+CGG | 0.650903 | 1.4:-23671392 | None:intergenic |
| AAGCTTGGAGCCATGTCCAG+GGG | 0.672594 | 1.4:-23669807 | None:intergenic |
| GAAGGTAGGATTTATGCAAG+AGG | 0.673198 | 1.4:+23668617 | MS.gene88610:CDS |
| CTGATGCAGAATCATTAGAG+AGG | 0.675563 | 1.4:+23670504 | MS.gene88610:CDS |
| TTCTCCGGATGAGCATTACA+GGG | 0.677025 | 1.4:+23669733 | MS.gene88610:CDS |
| TCTACTCCATGACCACAATG+AGG | 0.677316 | 1.4:+23671443 | MS.gene88610:CDS |
| CTTGATCAAGTCAAACTGTG+AGG | 0.692029 | 1.4:-23669891 | None:intergenic |
| TGATCCTTTCAAGGCCCGTG+TGG | 0.695071 | 1.4:+23668589 | MS.gene88610:CDS |
| ATGCAGAGAGGAGCCCATGG+TGG | 0.703495 | 1.4:+23669762 | MS.gene88610:CDS |
| CCTACCTTCATCATCCACAC+GGG | 0.703652 | 1.4:-23668603 | None:intergenic |
| GACCCACTTATCATGCTCAG+CGG | 0.703696 | 1.4:-23668564 | None:intergenic |
| CTGACAGTTCCAATCCCTGG+TGG | 0.706841 | 1.4:+23671280 | MS.gene88610:CDS |
| CCCACTTATCATGCTCAGCG+GGG | 0.720250 | 1.4:-23668562 | None:intergenic |
| ACAGGGCATTCTATGCAGAG+AGG | 0.731441 | 1.4:+23669750 | MS.gene88610:CDS |
| TAGCAGGCAATCCAACACGG+CGG | 0.783188 | 1.4:-23671389 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAAAAAAAATT+AGG | - | chr1.4:23670765-23670784 | None:intergenic | 0.0% |
| !!! | TGACATTTTTTAAATTATTA+TGG | + | chr1.4:23671022-23671041 | MS.gene88610:intron | 10.0% |
| !! | ATGATAAATATAAAGCATAA+TGG | - | chr1.4:23670594-23670613 | None:intergenic | 15.0% |
| !!! | ATGAAAAAGTATTTATAAGA+GGG | - | chr1.4:23671989-23672008 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTATTATGGAGA+AGG | + | chr1.4:23671028-23671047 | MS.gene88610:intron | 15.0% |
| !! | AAAGTAGAAGATAATTCATT+AGG | + | chr1.4:23668986-23669005 | MS.gene88610:intron | 20.0% |
| !! | AATGATAGAAATATTTCCTA+TGG | - | chr1.4:23670728-23670747 | None:intergenic | 20.0% |
| !! | GTTTCTTAATACTTAGAATT+TGG | + | chr1.4:23671718-23671737 | MS.gene88610:intron | 20.0% |
| !! | TATTAGAACATTTCATATCA+TGG | + | chr1.4:23670801-23670820 | MS.gene88610:intron | 20.0% |
| !! | TTTGTAAGTGAATAAAAAGT+TGG | - | chr1.4:23669699-23669718 | None:intergenic | 20.0% |
| !!! | CATGAAAAAGTATTTATAAG+AGG | - | chr1.4:23671990-23672009 | None:intergenic | 20.0% |
| !!! | TTTAGAAAACTGATTTTGAT+AGG | + | chr1.4:23669152-23669171 | MS.gene88610:intron | 20.0% |
| ! | AAAAAAACTTATCTCTGATG+TGG | - | chr1.4:23672106-23672125 | None:intergenic | 25.0% |
| ! | AAGAAAGATAGAATCATTAG+TGG | - | chr1.4:23670403-23670422 | None:intergenic | 25.0% |
| ! | ACAAAGATGAATACTTGAAA+GGG | + | chr1.4:23672402-23672421 | MS.gene88610:CDS | 25.0% |
| ! | ACTATGTCCTAGTTAATATA+AGG | + | chr1.4:23671587-23671606 | MS.gene88610:intron | 25.0% |
| ! | AGAAAGATAGAATCATTAGT+GGG | - | chr1.4:23670402-23670421 | None:intergenic | 25.0% |
| ! | ATACAACCAAAAAGAACATA+AGG | - | chr1.4:23672296-23672315 | None:intergenic | 25.0% |
| ! | ATAGAAAACAACTGAAAAAC+GGG | + | chr1.4:23670910-23670929 | MS.gene88610:intron | 25.0% |
| ! | ATGAAAATGTGTTCATAAGT+GGG | - | chr1.4:23671783-23671802 | None:intergenic | 25.0% |
| ! | ATGTGAAAAGGTTAATGTTA+TGG | + | chr1.4:23670857-23670876 | MS.gene88610:intron | 25.0% |
| ! | CATAGAAAACAACTGAAAAA+CGG | + | chr1.4:23670909-23670928 | MS.gene88610:intron | 25.0% |
| ! | GATTTAGTAGAAATACTCTT+TGG | + | chr1.4:23669421-23669440 | MS.gene88610:intron | 25.0% |
| ! | GTAGTAGATAATGAAAATGA+TGG | + | chr1.4:23671057-23671076 | MS.gene88610:intron | 25.0% |
| ! | TATTAAGAAACATGTCAACA+TGG | - | chr1.4:23671709-23671728 | None:intergenic | 25.0% |
| ! | TATTCACTTACAAACTAACA+GGG | + | chr1.4:23669705-23669724 | MS.gene88610:intron | 25.0% |
| ! | TATTGTGTATTTACAAGACA+TGG | - | chr1.4:23670653-23670672 | None:intergenic | 25.0% |
| ! | TGTGAAATGTATCATTTCAA+AGG | - | chr1.4:23670335-23670354 | None:intergenic | 25.0% |
| ! | TGTTAGGATTCTTAAAAGTT+GGG | + | chr1.4:23668682-23668701 | MS.gene88610:CDS | 25.0% |
| ! | TGTTTGAAAGGAAAATTTAG+TGG | + | chr1.4:23669189-23669208 | MS.gene88610:intron | 25.0% |
| ! | TTATTCACTTACAAACTAAC+AGG | + | chr1.4:23669704-23669723 | MS.gene88610:intron | 25.0% |
| ! | TTGCCTAAAAACACTAATTT+GGG | + | chr1.4:23669615-23669634 | MS.gene88610:intron | 25.0% |
| ! | TTTCGATTATATTCTACTCA+TGG | - | chr1.4:23670222-23670241 | None:intergenic | 25.0% |
| !! | ATGAAAGCCTTATATTAACT+AGG | - | chr1.4:23671597-23671616 | None:intergenic | 25.0% |
| !! | TTCATCTTTTCTATGTGAAA+AGG | + | chr1.4:23670845-23670864 | MS.gene88610:intron | 25.0% |
| !!! | AAAAAGTATTTATAAGAGGG+AGG | - | chr1.4:23671986-23672005 | None:intergenic | 25.0% |
| !!! | AACCTGAATATTTTTTGTAC+AGG | - | chr1.4:23671664-23671683 | None:intergenic | 25.0% |
| !!! | AAGAATGTTTGGTTTTACAT+TGG | + | chr1.4:23669362-23669381 | MS.gene88610:intron | 25.0% |
| !!! | ACCTGAATATTTTTTGTACA+GGG | - | chr1.4:23671663-23671682 | None:intergenic | 25.0% |
| !!! | AGGTAAAATACATTGTTTTG+AGG | + | chr1.4:23668835-23668854 | MS.gene88610:intron | 25.0% |
| !!! | GGTAATTTGTTCTCAAAAAA+AGG | - | chr1.4:23671164-23671183 | None:intergenic | 25.0% |
| !!! | TCCTCTAATATATTTTAGCT+CGG | + | chr1.4:23671198-23671217 | MS.gene88610:intron | 25.0% |
| !!! | TTTGATAGGTTTTAGCTTTT+AGG | + | chr1.4:23669166-23669185 | MS.gene88610:intron | 25.0% |
| AAAAATTGCAGAGAACATGA+AGG | - | chr1.4:23670827-23670846 | None:intergenic | 30.0% | |
| AATACTCTTTGGATTCTGTT+AGG | + | chr1.4:23669432-23669451 | MS.gene88610:intron | 30.0% | |
| AATCAGATTTGTCTCAAGAA+AGG | - | chr1.4:23669405-23669424 | None:intergenic | 30.0% | |
| ACACAATAATCTCAGCTAAT+AGG | + | chr1.4:23670665-23670684 | MS.gene88610:intron | 30.0% | |
| ACAGTAAAGTGAAAGACATT+AGG | - | chr1.4:23672319-23672338 | None:intergenic | 30.0% | |
| ACCAAATAAACATTCCTCTT+AGG | - | chr1.4:23668716-23668735 | None:intergenic | 30.0% | |
| ACCAAGACATTTGATATGTA+GGG | - | chr1.4:23668883-23668902 | None:intergenic | 30.0% | |
| ACTAATTGGATTGTCACATA+AGG | - | chr1.4:23669090-23669109 | None:intergenic | 30.0% | |
| ATCACACAAAAACCAAGATT+TGG | - | chr1.4:23669475-23669494 | None:intergenic | 30.0% | |
| CAAATATGCAACAATTGGAT+TGG | - | chr1.4:23672050-23672069 | None:intergenic | 30.0% | |
| CAATCCAATTGTTGCATATT+TGG | + | chr1.4:23672048-23672067 | MS.gene88610:intron | 30.0% | |
| CACAAAGATGAATACTTGAA+AGG | + | chr1.4:23672401-23672420 | MS.gene88610:CDS | 30.0% | |
| CAGAACATTGATATGATAAG+AGG | - | chr1.4:23670272-23670291 | None:intergenic | 30.0% | |
| CATGAAAATGTGTTCATAAG+TGG | - | chr1.4:23671784-23671803 | None:intergenic | 30.0% | |
| CTATAGAAATTTGTAGCCAT+AGG | + | chr1.4:23670709-23670728 | MS.gene88610:intron | 30.0% | |
| CTGTTAGGATTCTTAAAAGT+TGG | + | chr1.4:23668681-23668700 | MS.gene88610:CDS | 30.0% | |
| CTTGCCTAAAAACACTAATT+TGG | + | chr1.4:23669614-23669633 | MS.gene88610:intron | 30.0% | |
| GAAAGATAGAATCATTAGTG+GGG | - | chr1.4:23670401-23670420 | None:intergenic | 30.0% | |
| GACATGTTTGATGAATTTGA+TGG | - | chr1.4:23670015-23670034 | None:intergenic | 30.0% | |
| TAAGCATACTAGCATCAATT+AGG | - | chr1.4:23671492-23671511 | None:intergenic | 30.0% | |
| TACCAAGACATTTGATATGT+AGG | - | chr1.4:23668884-23668903 | None:intergenic | 30.0% | |
| TAGAAAACAACTGAAAAACG+GGG | + | chr1.4:23670911-23670930 | MS.gene88610:intron | 30.0% | |
| TAGAGGAAGAATCTAATAAG+AGG | - | chr1.4:23671185-23671204 | None:intergenic | 30.0% | |
| TATCATAGTCTATCCTTGTT+AGG | - | chr1.4:23671899-23671918 | None:intergenic | 30.0% | |
| TATCATTTCAAAGGTAAGCA+TGG | - | chr1.4:23670326-23670345 | None:intergenic | 30.0% | |
| TCAACATGGAAACAGAATAA+AGG | - | chr1.4:23671695-23671714 | None:intergenic | 30.0% | |
| TGATGAATTTGATGGAGTAT+TGG | - | chr1.4:23670007-23670026 | None:intergenic | 30.0% | |
| TGCCTAAAAACACTAATTTG+GGG | + | chr1.4:23669616-23669635 | MS.gene88610:intron | 30.0% | |
| TGTTCTGTTATACATTTGAG+TGG | + | chr1.4:23670285-23670304 | MS.gene88610:intron | 30.0% | |
| TTACCACTCTACAAATATTG+CGG | + | chr1.4:23670136-23670155 | MS.gene88610:intron | 30.0% | |
| TTGTAAAAATCACCTCATTG+TGG | - | chr1.4:23671458-23671477 | None:intergenic | 30.0% | |
| ! | AATGTTATGGTTGATGCATT+TGG | + | chr1.4:23670870-23670889 | MS.gene88610:intron | 30.0% |
| ! | ACTTAAATTATAGTTCTGCG+CGG | + | chr1.4:23670049-23670068 | MS.gene88610:intron | 30.0% |
| ! | ATCCCCAAATTAGTGTTTTT+AGG | - | chr1.4:23669621-23669640 | None:intergenic | 30.0% |
| ! | ATGTTATGGTTGATGCATTT+GGG | + | chr1.4:23670871-23670890 | MS.gene88610:intron | 30.0% |
| ! | CACTTATGAACACATTTTCA+TGG | + | chr1.4:23671782-23671801 | MS.gene88610:intron | 30.0% |
| ! | TATGCACCTTATGTTCTTTT+TGG | + | chr1.4:23672287-23672306 | MS.gene88610:intron | 30.0% |
| ! | TATTAACATGGCCTTTTTGA+AGG | + | chr1.4:23669946-23669965 | MS.gene88610:CDS | 30.0% |
| !! | CAAGTCAATGTTCTAAAGTT+AGG | - | chr1.4:23669650-23669669 | None:intergenic | 30.0% |
| !! | GGATGTTGTTTCTATTAACA+TGG | + | chr1.4:23669934-23669953 | MS.gene88610:CDS | 30.0% |
| !! | TTAGCTTTTAGGTGTTTGAA+AGG | + | chr1.4:23669177-23669196 | MS.gene88610:intron | 30.0% |
| !!! | CAAATTAGTGTTTTTAGGCA+AGG | - | chr1.4:23669616-23669635 | None:intergenic | 30.0% |
| !!! | CCTCTAATATATTTTAGCTC+GGG | + | chr1.4:23671199-23671218 | MS.gene88610:intron | 30.0% |
| !!! | TTGATTTTGGTTCCAAATCT+TGG | + | chr1.4:23669460-23669479 | MS.gene88610:intron | 30.0% |
| AAACATTCTTAGCACGCATT+TGG | - | chr1.4:23669352-23669371 | None:intergenic | 35.0% | |
| AAAGGTAAGCATGGCATTAT+TGG | - | chr1.4:23670317-23670336 | None:intergenic | 35.0% | |
| AAATGCGTGCTAAGAATGTT+TGG | + | chr1.4:23669351-23669370 | MS.gene88610:intron | 35.0% | |
| AAGGTAGGATTTATGCAAGA+GGG | + | chr1.4:23668618-23668637 | MS.gene88610:CDS | 35.0% | |
| AAGTCATGTCATTGTCTGTA+GGG | + | chr1.4:23671519-23671538 | MS.gene88610:intron | 35.0% | |
| AATTCCATCGCATTGCATTT+AGG | + | chr1.4:23670112-23670131 | MS.gene88610:intron | 35.0% | |
| ACATTTGATATGTAGGGACA+TGG | - | chr1.4:23668877-23668896 | None:intergenic | 35.0% | |
| AGTACAACTCAGACTCAAAA+AGG | - | chr1.4:23668908-23668927 | None:intergenic | 35.0% | |
| AGTTGCACAATTACAGTCAT+CGG | - | chr1.4:23670992-23671011 | None:intergenic | 35.0% | |
| ATCTCTTACATGTTCATCGA+AGG | - | chr1.4:23672465-23672484 | None:intergenic | 35.0% | |
| ATTATTATGGAGAAGGCAAG+AGG | + | chr1.4:23671035-23671054 | MS.gene88610:intron | 35.0% | |
| ATTCCATCGCATTGCATTTA+GGG | + | chr1.4:23670113-23670132 | MS.gene88610:intron | 35.0% | |
| CAAGCCAAATATGCAACAAT+TGG | - | chr1.4:23672055-23672074 | None:intergenic | 35.0% | |
| CCCGAGCTAAAATATATTAG+AGG | - | chr1.4:23671202-23671221 | None:intergenic | 35.0% | |
| GCCCTGTACAAAAAATATTC+AGG | + | chr1.4:23671659-23671678 | MS.gene88610:intron | 35.0% | |
| GCCTAAGAGGAATGTTTATT+TGG | + | chr1.4:23668712-23668731 | MS.gene88610:CDS | 35.0% | |
| TAAGTCATGTCATTGTCTGT+AGG | + | chr1.4:23671518-23671537 | MS.gene88610:intron | 35.0% | |
| TATCTCTGATGTGGCAAATA+AGG | - | chr1.4:23672097-23672116 | None:intergenic | 35.0% | |
| TCCCTACATATCAAATGTCT+TGG | + | chr1.4:23668879-23668898 | MS.gene88610:intron | 35.0% | |
| TGACTCGTGTTACATGTTTA+TGG | - | chr1.4:23672147-23672166 | None:intergenic | 35.0% | |
| TTACCCTGAAAGACATATTG+CGG | - | chr1.4:23670559-23670578 | None:intergenic | 35.0% | |
| TTCGATGAACATGTAAGAGA+TGG | + | chr1.4:23672464-23672483 | MS.gene88610:CDS | 35.0% | |
| TTTGTGTAACCACAATGTTC+TGG | - | chr1.4:23672257-23672276 | None:intergenic | 35.0% | |
| ! | CTGTTAGGCAAACTTGATTT+TGG | + | chr1.4:23669447-23669466 | MS.gene88610:intron | 35.0% |
| ! | GCAGTAGATTTGTTTGAGTT+GGG | + | chr1.4:23672206-23672225 | MS.gene88610:intron | 35.0% |
| ! | TGAAAAGTTTTCGCTTTCGA+AGG | + | chr1.4:23668775-23668794 | MS.gene88610:CDS | 35.0% |
| ! | TGCAGTAGATTTGTTTGAGT+TGG | + | chr1.4:23672205-23672224 | MS.gene88610:intron | 35.0% |
| !! | AGAGTATTGAAAGCATCAGA+AGG | + | chr1.4:23669861-23669880 | MS.gene88610:CDS | 35.0% |
| !! | GATTTTCAGGACTTGAATGT+TGG | + | chr1.4:23668797-23668816 | MS.gene88610:CDS | 35.0% |
| !! | GCATTTTTCAGAACACAAAG+TGG | - | chr1.4:23672188-23672207 | None:intergenic | 35.0% |
| !! | TTTTGAGAGAAAGCGATTGT+AGG | - | chr1.4:23671106-23671125 | None:intergenic | 35.0% |
| AAAGACATATTGCGGCAACT+AGG | - | chr1.4:23670551-23670570 | None:intergenic | 40.0% | |
| AAATCACCTCATTGTGGTCA+TGG | - | chr1.4:23671452-23671471 | None:intergenic | 40.0% | |
| ACCTTACAAACCAGTTTCGT+AGG | - | chr1.4:23671749-23671768 | None:intergenic | 40.0% | |
| AGCAGAGTTGTCATAAAGCT+TGG | - | chr1.4:23669825-23669844 | None:intergenic | 40.0% | |
| AGGATTGAACATATTGAGCG+TGG | + | chr1.4:23671858-23671877 | MS.gene88610:intron | 40.0% | |
| ATAGGTGAGAATCCAATAGC+AGG | - | chr1.4:23671408-23671427 | None:intergenic | 40.0% | |
| ATGTTCAATCCTAGTCGTGA+AGG | - | chr1.4:23671850-23671869 | None:intergenic | 40.0% | |
| CCAATTGTGTGCTAAACACA+TGG | - | chr1.4:23669269-23669288 | None:intergenic | 40.0% | |
| CCATGTGTTTAGCACACAAT+TGG | + | chr1.4:23669266-23669285 | MS.gene88610:intron | 40.0% | |
| CCTTACAAACCAGTTTCGTA+GGG | - | chr1.4:23671748-23671767 | None:intergenic | 40.0% | |
| CTAACTCTACTCGACAAAAC+CGG | + | chr1.4:23671942-23671961 | MS.gene88610:intron | 40.0% | |
| CTCTAATGATTCTGCATCAG+CGG | - | chr1.4:23670504-23670523 | None:intergenic | 40.0% | |
| CTGATGCAGAATCATTAGAG+AGG | + | chr1.4:23670504-23670523 | MS.gene88610:CDS | 40.0% | |
| CTTGATCAAGTCAAACTGTG+AGG | - | chr1.4:23669894-23669913 | None:intergenic | 40.0% | |
| GAAGGTAGGATTTATGCAAG+AGG | + | chr1.4:23668617-23668636 | MS.gene88610:CDS | 40.0% | |
| GCAAATTCATGACAAAACCC+TGG | - | chr1.4:23670436-23670455 | None:intergenic | 40.0% | |
| GCATTCATTACCATACAAGC+CGG | - | chr1.4:23671964-23671983 | None:intergenic | 40.0% | |
| GCTAAACACATGGTAGCAAA+CGG | - | chr1.4:23669259-23669278 | None:intergenic | 40.0% | |
| GCTAATCAAAAGCTACGCTT+TGG | - | chr1.4:23669300-23669319 | None:intergenic | 40.0% | |
| GCTTTATGACAACTCTGCTA+TGG | + | chr1.4:23669826-23669845 | MS.gene88610:CDS | 40.0% | |
| GTTAGAAAATGCTGTCCAAG+AGG | + | chr1.4:23671308-23671327 | MS.gene88610:CDS | 40.0% | |
| GTTGGTATAGTGCTAGATGA+AGG | + | chr1.4:23668815-23668834 | MS.gene88610:CDS | 40.0% | |
| TAACCCTAAATGCAATGCGA+TGG | - | chr1.4:23670119-23670138 | None:intergenic | 40.0% | |
| TATCAACAGATGGCCTAACA+AGG | + | chr1.4:23671883-23671902 | MS.gene88610:intron | 40.0% | |
| TGCAAGACTAACATCGTGTT+TGG | + | chr1.4:23669222-23669241 | MS.gene88610:intron | 40.0% | |
| TGCAGTATCTTGAAGCTGTT+AGG | + | chr1.4:23668666-23668685 | MS.gene88610:CDS | 40.0% | |
| TGCTATTGGATTCTCACCTA+TGG | + | chr1.4:23671407-23671426 | MS.gene88610:CDS | 40.0% | |
| TGTTCAATCCTAGTCGTGAA+GGG | - | chr1.4:23671849-23671868 | None:intergenic | 40.0% | |
| TTGCCGCAATATGTCTTTCA+GGG | + | chr1.4:23670553-23670572 | MS.gene88610:CDS | 40.0% | |
| TTGTGGTCATGGAGTAGAAT+AGG | - | chr1.4:23671441-23671460 | None:intergenic | 40.0% | |
| TTGTTAGGCCATCTGTTGAT+AGG | - | chr1.4:23671884-23671903 | None:intergenic | 40.0% | |
| ! | ATGTTCTGGCACAACCTTTT+CGG | - | chr1.4:23672243-23672262 | None:intergenic | 40.0% |
| ! | ATTTTCTAACAATCCCCACC+AGG | - | chr1.4:23671298-23671317 | None:intergenic | 40.0% |
| ! | GTTTGACTTACAGTTGGAGA+TGG | - | chr1.4:23669980-23669999 | None:intergenic | 40.0% |
| ! | TTCGCTTTCGAAGGATTTTC+AGG | + | chr1.4:23668784-23668803 | MS.gene88610:CDS | 40.0% |
| ! | TTTTCTAACAATCCCCACCA+GGG | - | chr1.4:23671297-23671316 | None:intergenic | 40.0% |
| !! | AAGCGTAGCTTTTGATTAGC+TGG | + | chr1.4:23669300-23669319 | MS.gene88610:intron | 40.0% |
| !! | AGAATAGGAGTGTTTGCCAT+AGG | - | chr1.4:23671426-23671445 | None:intergenic | 40.0% |
| !! | AGCATAATGGACACAAGACA+TGG | - | chr1.4:23670617-23670636 | None:intergenic | 40.0% |
| !! | CTCACAGTTTGACTTGATCA+AGG | + | chr1.4:23669892-23669911 | MS.gene88610:CDS | 40.0% |
| !!! | TTTGGTTTTTGCTCCTGATG+AGG | + | chr1.4:23668730-23668749 | MS.gene88610:CDS | 40.0% |
| AAACTGACAGTTCCAATCCC+TGG | + | chr1.4:23671277-23671296 | MS.gene88610:CDS | 45.0% | |
| AAGGTTGTGCCAGAACATTG+TGG | + | chr1.4:23672245-23672264 | MS.gene88610:intron | 45.0% | |
| AATACACACCCTTCACGACT+AGG | + | chr1.4:23671838-23671857 | MS.gene88610:intron | 45.0% | |
| AATCCAGCTTCTGCTTCAGA+TGG | - | chr1.4:23670461-23670480 | None:intergenic | 45.0% | |
| AATGATTCTGCATCAGCGGT+TGG | - | chr1.4:23670500-23670519 | None:intergenic | 45.0% | |
| AATGCCCTGTAATGCTCATC+CGG | - | chr1.4:23669740-23669759 | None:intergenic | 45.0% | |
| ACAAACCAGTTTCGTAGGGT+TGG | - | chr1.4:23671744-23671763 | None:intergenic | 45.0% | |
| CAATAGCAGGCAATCCAACA+CGG | - | chr1.4:23671395-23671414 | None:intergenic | 45.0% | |
| CACTTACAAACTAACAGGGC+TGG | + | chr1.4:23669709-23669728 | MS.gene88610:intron | 45.0% | |
| CGACCGCAATATTTGTAGAG+TGG | - | chr1.4:23670142-23670161 | None:intergenic | 45.0% | |
| GATTTATGCAAGAGGGTCAC+AGG | + | chr1.4:23668625-23668644 | MS.gene88610:CDS | 45.0% | |
| GGGTTGTATCCTAACCGAAA+AGG | + | chr1.4:23672226-23672245 | MS.gene88610:intron | 45.0% | |
| GTTGCCGCAATATGTCTTTC+AGG | + | chr1.4:23670552-23670571 | MS.gene88610:CDS | 45.0% | |
| TCCTACCTTCATCATCCACA+CGG | - | chr1.4:23668607-23668626 | None:intergenic | 45.0% | |
| TCTAAATCTGCTGCGACACA+CGG | - | chr1.4:23669114-23669133 | None:intergenic | 45.0% | |
| TCTACTCCATGACCACAATG+AGG | + | chr1.4:23671443-23671462 | MS.gene88610:CDS | 45.0% | |
| TGCTGAAATTTCTTAGCGCG+CGG | - | chr1.4:23670361-23670380 | None:intergenic | 45.0% | |
| TGGAGTTCCAGCCTTCAAAA+AGG | - | chr1.4:23669960-23669979 | None:intergenic | 45.0% | |
| TTCTCCGGATGAGCATTACA+GGG | + | chr1.4:23669733-23669752 | MS.gene88610:CDS | 45.0% | |
| TTTGCTCCTGATGAGGAGAT+TGG | + | chr1.4:23668737-23668756 | MS.gene88610:CDS | 45.0% | |
| ! | GGAGTCGTTTGACTTACAGT+TGG | - | chr1.4:23669986-23670005 | None:intergenic | 45.0% |
| ! | GGGATTGGAACTGTCAGTTT+TGG | - | chr1.4:23671277-23671296 | None:intergenic | 45.0% |
| ! | GTACAGGGCTACACTGTTTT+AGG | - | chr1.4:23671648-23671667 | None:intergenic | 45.0% |
| ! | GTTGGGATTTTCAGCCTAAG+AGG | + | chr1.4:23668699-23668718 | MS.gene88610:CDS | 45.0% |
| ! | TGATTAGCTGGATAGTGCTG+TGG | + | chr1.4:23669312-23669331 | MS.gene88610:intron | 45.0% |
| !! | AACATGGCCTTTTTGAAGGC+TGG | + | chr1.4:23669950-23669969 | MS.gene88610:CDS | 45.0% |
| !! | CAGTTTGACTTGATCAAGGC+CGG | + | chr1.4:23669896-23669915 | MS.gene88610:CDS | 45.0% |
| !! | CCCTACGAAACTGGTTTGTA+AGG | + | chr1.4:23671745-23671764 | MS.gene88610:intron | 45.0% |
| !! | CTTTCTTTTGCTGTGCACCA+GGG | + | chr1.4:23670416-23670435 | MS.gene88610:intron | 45.0% |
| !! | TCTTTCTTTTGCTGTGCACC+AGG | + | chr1.4:23670415-23670434 | MS.gene88610:intron | 45.0% |
| !! | TTTGGTGATGACTGGTTTCC+CGG | - | chr1.4:23671259-23671278 | None:intergenic | 45.0% |
| !!! | CTGTCAGTTTTGGTGATGAC+TGG | - | chr1.4:23671267-23671286 | None:intergenic | 45.0% |
| AAAGCTTGGAGCCATGTCCA+GGG | - | chr1.4:23669811-23669830 | None:intergenic | 50.0% | |
| ACCCACTTATCATGCTCAGC+GGG | - | chr1.4:23668566-23668585 | None:intergenic | 50.0% | |
| CCTACCTTCATCATCCACAC+GGG | - | chr1.4:23668606-23668625 | None:intergenic | 50.0% | |
| CGTGTTGGATTGCCTGCTAT+TGG | + | chr1.4:23671393-23671412 | MS.gene88610:CDS | 50.0% | |
| CTGCGACACACGGAACTAAT+TGG | - | chr1.4:23669104-23669123 | None:intergenic | 50.0% | |
| CTTCTCCGGATGAGCATTAC+AGG | + | chr1.4:23669732-23669751 | MS.gene88610:CDS | 50.0% | |
| CTTTGATCACCAGCCACCAT+GGG | - | chr1.4:23669778-23669797 | None:intergenic | 50.0% | |
| GAAAATGCTGTCCAAGAGGC+TGG | + | chr1.4:23671312-23671331 | MS.gene88610:CDS | 50.0% | |
| GACCCACTTATCATGCTCAG+CGG | - | chr1.4:23668567-23668586 | None:intergenic | 50.0% | |
| GCTCTACTCTCACACTGATG+TGG | + | chr1.4:23668538-23668557 | MS.gene88610:CDS | 50.0% | |
| GCTGAAATTTCTTAGCGCGC+GGG | - | chr1.4:23670360-23670379 | None:intergenic | 50.0% | |
| GCTGGTGATCAAAGCTGTTG+GGG | + | chr1.4:23669784-23669803 | MS.gene88610:CDS | 50.0% | |
| GGCTGGTGATCAAAGCTGTT+GGG | + | chr1.4:23669783-23669802 | MS.gene88610:CDS | 50.0% | |
| GTGGAAGCAGGAAAGATCTC+CGG | - | chr1.4:23671354-23671373 | None:intergenic | 50.0% | |
| GTGGGTCCATGATCCTTTCA+AGG | + | chr1.4:23668580-23668599 | MS.gene88610:CDS | 50.0% | |
| TAAAGCTTGGAGCCATGTCC+AGG | - | chr1.4:23669812-23669831 | None:intergenic | 50.0% | |
| TAACAATCCCCACCAGGGAT+TGG | - | chr1.4:23671292-23671311 | None:intergenic | 50.0% | |
| TGACAGTTCCAATCCCTGGT+GGG | + | chr1.4:23671281-23671300 | MS.gene88610:CDS | 50.0% | |
| TGACCACCAATCTCCTCATC+AGG | - | chr1.4:23668746-23668765 | None:intergenic | 50.0% | |
| TGGCTGGTGATCAAAGCTGT+TGG | + | chr1.4:23669782-23669801 | MS.gene88610:CDS | 50.0% | |
| TGGTGGGAAACTTGGTAAGC+CGG | + | chr1.4:23671332-23671351 | MS.gene88610:CDS | 50.0% | |
| TTTGGCCAACCCTACGAAAC+TGG | + | chr1.4:23671736-23671755 | MS.gene88610:intron | 50.0% | |
| ! | ACAGGGCATTCTATGCAGAG+AGG | + | chr1.4:23669750-23669769 | MS.gene88610:CDS | 50.0% |
| ! | CTGGCACAACCTTTTCGGTT+AGG | - | chr1.4:23672238-23672257 | None:intergenic | 50.0% |
| ! | GAGGAGATTGGTGGTCATGA+TGG | + | chr1.4:23668749-23668768 | MS.gene88610:CDS | 50.0% |
| !! | CTCGACAAAACCGGCTTGTA+TGG | + | chr1.4:23671951-23671970 | MS.gene88610:intron | 50.0% |
| AAGCTTGGAGCCATGTCCAG+GGG | - | chr1.4:23669810-23669829 | None:intergenic | 55.0% | |
| AAGGCCCGTGTGGATGATGA+AGG | + | chr1.4:23668599-23668618 | MS.gene88610:CDS | 55.0% | |
| AATGCTGTCCAAGAGGCTGG+TGG | + | chr1.4:23671315-23671334 | MS.gene88610:CDS | 55.0% | |
| AGAGGCGAATTGCCGAAGAG+TGG | + | chr1.4:23670522-23670541 | MS.gene88610:CDS | 55.0% | |
| ATCCCCTTCAGCCTTCAAGC+CGG | - | chr1.4:23669918-23669937 | None:intergenic | 55.0% | |
| ATGCTGTCCAAGAGGCTGGT+GGG | + | chr1.4:23671316-23671335 | MS.gene88610:CDS | 55.0% | |
| CAAGAGGCTGGTGGGAAACT+TGG | + | chr1.4:23671324-23671343 | MS.gene88610:CDS | 55.0% | |
| CAAGTTTCCCACCAGCCTCT+TGG | - | chr1.4:23671326-23671345 | None:intergenic | 55.0% | |
| CACGGGCCTTGAAAGGATCA+TGG | - | chr1.4:23668589-23668608 | None:intergenic | 55.0% | |
| CCCACTTATCATGCTCAGCG+GGG | - | chr1.4:23668565-23668584 | None:intergenic | 55.0% | |
| CCCCGCTGAGCATGATAAGT+GGG | + | chr1.4:23668562-23668581 | MS.gene88610:CDS | 55.0% | |
| CCCGTGTGGATGATGAAGGT+AGG | + | chr1.4:23668603-23668622 | MS.gene88610:CDS | 55.0% | |
| CTGACAGTTCCAATCCCTGG+TGG | + | chr1.4:23671280-23671299 | MS.gene88610:CDS | 55.0% | |
| CTGTCTGTGCTTGATGCGTC+CGG | + | chr1.4:23671237-23671256 | MS.gene88610:CDS | 55.0% | |
| GACAGTTCCAATCCCTGGTG+GGG | + | chr1.4:23671282-23671301 | MS.gene88610:CDS | 55.0% | |
| GAGCGTGGCCTATCAACAGA+TGG | + | chr1.4:23671873-23671892 | MS.gene88610:intron | 55.0% | |
| GAGGCGAATTGCCGAAGAGT+GGG | + | chr1.4:23670523-23670542 | MS.gene88610:CDS | 55.0% | |
| GATTCTGCATCAGCGGTTGG+TGG | - | chr1.4:23670497-23670516 | None:intergenic | 55.0% | |
| GCAACTAGGTGCCCACTCTT+CGG | - | chr1.4:23670537-23670556 | None:intergenic | 55.0% | |
| GCGGAAATAGCGTGCATCTG+TGG | - | chr1.4:23671373-23671392 | None:intergenic | 55.0% | |
| GCTCCTGATGAGGAGATTGG+TGG | + | chr1.4:23668740-23668759 | MS.gene88610:CDS | 55.0% | |
| GCTTTGATCACCAGCCACCA+TGG | - | chr1.4:23669779-23669798 | None:intergenic | 55.0% | |
| TAGCAGGCAATCCAACACGG+CGG | - | chr1.4:23671392-23671411 | None:intergenic | 55.0% | |
| TAGCGTGCATCTGTGGAAGC+AGG | - | chr1.4:23671366-23671385 | None:intergenic | 55.0% | |
| TCATCCACACGGGCCTTGAA+AGG | - | chr1.4:23668596-23668615 | None:intergenic | 55.0% | |
| TCCCCGCTGAGCATGATAAG+TGG | + | chr1.4:23668561-23668580 | MS.gene88610:CDS | 55.0% | |
| TCTATGCAGAGAGGAGCCCA+TGG | + | chr1.4:23669759-23669778 | MS.gene88610:CDS | 55.0% | |
| TGATCCTTTCAAGGCCCGTG+TGG | + | chr1.4:23668589-23668608 | MS.gene88610:CDS | 55.0% | |
| TGTCTGTGCTTGATGCGTCC+GGG | + | chr1.4:23671238-23671257 | MS.gene88610:CDS | 55.0% | |
| ! | CAGCCATCTGAAGCAGAAGC+TGG | + | chr1.4:23670455-23670474 | MS.gene88610:CDS | 55.0% |
| !! | ACTAACAGGGCTGGCTTCTC+CGG | + | chr1.4:23669718-23669737 | MS.gene88610:intron | 55.0% |
| !! | CTTGATCAAGGCCGGCTTGA+AGG | + | chr1.4:23669904-23669923 | MS.gene88610:CDS | 55.0% |
| ATCAAAGCTGTTGGGGCCCC+TGG | + | chr1.4:23669791-23669810 | MS.gene88610:CDS | 60.0% | |
| ATGCAGAGAGGAGCCCATGG+TGG | + | chr1.4:23669762-23669781 | MS.gene88610:CDS | 60.0% | |
| ! | GCACGCTATTTCCGCCGTGT+TGG | + | chr1.4:23671378-23671397 | MS.gene88610:CDS | 60.0% |
| !! | AAGGCCGGCTTGAAGGCTGA+AGG | + | chr1.4:23669911-23669930 | MS.gene88610:CDS | 60.0% |
| !! | AGGCCGGCTTGAAGGCTGAA+GGG | + | chr1.4:23669912-23669931 | MS.gene88610:CDS | 60.0% |
| AGAGAGGAGCCCATGGTGGC+TGG | + | chr1.4:23669766-23669785 | MS.gene88610:CDS | 65.0% | |
| !! | GGCCGGCTTGAAGGCTGAAG+GGG | + | chr1.4:23669913-23669932 | MS.gene88610:CDS | 65.0% |
| GCTGTTGGGGCCCCTGGACA+TGG | + | chr1.4:23669797-23669816 | MS.gene88610:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 23668536 | 23672508 | 23668536 | ID=MS.gene88610 |
| chr1.4 | mRNA | 23668536 | 23672508 | 23668536 | ID=MS.gene88610.t1;Parent=MS.gene88610 |
| chr1.4 | exon | 23668536 | 23668836 | 23668536 | ID=MS.gene88610.t1.exon1;Parent=MS.gene88610.t1 |
| chr1.4 | CDS | 23668536 | 23668836 | 23668536 | ID=cds.MS.gene88610.t1;Parent=MS.gene88610.t1 |
| chr1.4 | exon | 23669726 | 23669988 | 23669726 | ID=MS.gene88610.t1.exon2;Parent=MS.gene88610.t1 |
| chr1.4 | CDS | 23669726 | 23669988 | 23669726 | ID=cds.MS.gene88610.t1;Parent=MS.gene88610.t1 |
| chr1.4 | exon | 23670437 | 23670574 | 23670437 | ID=MS.gene88610.t1.exon3;Parent=MS.gene88610.t1 |
| chr1.4 | CDS | 23670437 | 23670574 | 23670437 | ID=cds.MS.gene88610.t1;Parent=MS.gene88610.t1 |
| chr1.4 | exon | 23671216 | 23671464 | 23671216 | ID=MS.gene88610.t1.exon4;Parent=MS.gene88610.t1 |
| chr1.4 | CDS | 23671216 | 23671464 | 23671216 | ID=cds.MS.gene88610.t1;Parent=MS.gene88610.t1 |
| chr1.4 | exon | 23672395 | 23672508 | 23672395 | ID=MS.gene88610.t1.exon5;Parent=MS.gene88610.t1 |
| chr1.4 | CDS | 23672395 | 23672508 | 23672395 | ID=cds.MS.gene88610.t1;Parent=MS.gene88610.t1 |
| Gene Sequence |
| Protein sequence |
