Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88632.t1 | XP_003589825.2 | 96.2 | 398 | 15 | 0 | 1 | 398 | 1 | 398 | 2.90E-212 | 747.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88632.t1 | Q2NI00 | 41.5 | 371 | 183 | 9 | 49 | 398 | 2 | 359 | 9.1e-66 | 252.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88632.t1 | G7IDE5 | 96.2 | 398 | 15 | 0 | 1 | 398 | 1 | 398 | 2.1e-212 | 747.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050558 | MS.gene88632 | 0.810092 | 1.37E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene88632 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene88632 | 0.817611 | 3.01E-52 | -1.69E-46 |
| MS.gene054473 | MS.gene88632 | 0.809197 | 2.13E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene88632 | 0.821138 | 4.73E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene88632 | 0.805941 | 1.05E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88632.t1 | MTR_1g039990 | 96.231 | 398 | 15 | 0 | 1 | 398 | 1 | 398 | 0.0 | 771 |
| MS.gene88632.t1 | MTR_0804s0020 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 2.81e-26 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88632.t1 | AT3G28760 | 69.972 | 353 | 104 | 1 | 47 | 397 | 91 | 443 | 0.0 | 520 |
| MS.gene88632.t1 | AT3G28760 | 69.972 | 353 | 104 | 1 | 47 | 397 | 69 | 421 | 0.0 | 519 |
Find 82 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGCCTTCTTCTTCTTCT+TGG | 0.101742 | 1.4:+24144783 | MS.gene88632:CDS |
| TGCTAGTGAGAAGGATATTT+TGG | 0.180793 | 1.4:+24146428 | MS.gene88632:CDS |
| ACAAATTGAATTACCTTGTT+TGG | 0.229202 | 1.4:-24148904 | None:intergenic |
| CAAATTGAATTACCTTGTTT+GGG | 0.271252 | 1.4:-24148903 | None:intergenic |
| TTTGGATGCACAAAATAAAA+AGG | 0.273689 | 1.4:+24146446 | MS.gene88632:CDS |
| AATCAAAGAAAGTGTGGATA+TGG | 0.301157 | 1.4:+24144834 | MS.gene88632:CDS |
| CATGCCTACATTGCTGTTCC+AGG | 0.338531 | 1.4:+24148420 | MS.gene88632:CDS |
| AGTGATTGTGGTAGATCAAC+AGG | 0.345733 | 1.4:+24148485 | MS.gene88632:CDS |
| CATTGCTTTCTTCTGTTCTT+CGG | 0.350670 | 1.4:-24147704 | None:intergenic |
| TTCTTCTTCTTGGACACCAT+TGG | 0.354356 | 1.4:+24144793 | MS.gene88632:CDS |
| ATGTCTTTACTGTCGCAAAT+TGG | 0.354779 | 1.4:+24144695 | MS.gene88632:CDS |
| TTCCTCAACTTGCCAATGAT+TGG | 0.356737 | 1.4:+24144927 | MS.gene88632:CDS |
| AGGATTATTTCTTGTTCATT+CGG | 0.373476 | 1.4:+24147925 | MS.gene88632:CDS |
| AGATGGCAAATACAGTCTTT+TGG | 0.378386 | 1.4:-24147399 | None:intergenic |
| TGAGCCTATTCTTGAGCTTA+AGG | 0.383726 | 1.4:+24147599 | MS.gene88632:CDS |
| AAATTCTTGAATCTCTATTC+CGG | 0.391166 | 1.4:-24149076 | None:intergenic |
| CAAATTCAAGTTGCTGGAAT+GGG | 0.397178 | 1.4:+24147756 | MS.gene88632:CDS |
| GCACTTGAACATGGCTTAGA+TGG | 0.408508 | 1.4:+24147552 | MS.gene88632:CDS |
| TGGACACCATTGGAGGATAC+TGG | 0.409798 | 1.4:+24144803 | MS.gene88632:CDS |
| AATTTGTGTCACAGTGGCTT+TGG | 0.410779 | 1.4:-24147739 | None:intergenic |
| GTGACACAAATTCAAGTTGC+TGG | 0.412213 | 1.4:+24147750 | MS.gene88632:CDS |
| TTTGCCTCCACAAGGATTAG+TGG | 0.415111 | 1.4:-24148555 | None:intergenic |
| TTGTAGTTAATTTACTTGAT+TGG | 0.425623 | 1.4:+24146544 | MS.gene88632:CDS |
| GAAGAAGGCATTGAAGAAGA+AGG | 0.427373 | 1.4:-24144773 | None:intergenic |
| CGGCAAAGAATTGCAATTGT+TGG | 0.429555 | 1.4:+24148510 | MS.gene88632:CDS |
| AGTTAATTTACTTGATTGGC+AGG | 0.445134 | 1.4:+24146548 | MS.gene88632:CDS |
| TCTTGTTCATTCGGAATGCT+TGG | 0.450060 | 1.4:+24147934 | MS.gene88632:CDS |
| CTCAAGAAATGTCTGAGCTT+CGG | 0.461769 | 1.4:-24147434 | None:intergenic |
| CCAGTGACATCACTAAAAGT+TGG | 0.464939 | 1.4:+24149012 | MS.gene88632:CDS |
| TACCTGTCAGAATTAAAATC+AGG | 0.467479 | 1.4:+24148456 | MS.gene88632:CDS |
| CAAGTTGAGGAAGGTGAGAT+GGG | 0.470330 | 1.4:-24144916 | None:intergenic |
| TAAAATACATGACCAATCAT+TGG | 0.473391 | 1.4:-24144939 | None:intergenic |
| GCAAGTTGAGGAAGGTGAGA+TGG | 0.481357 | 1.4:-24144917 | None:intergenic |
| TTCTTCTTGGACACCATTGG+AGG | 0.485849 | 1.4:+24144796 | MS.gene88632:CDS |
| AAACGTGTGTTGGAAGTAGA+AGG | 0.486239 | 1.4:-24144740 | None:intergenic |
| ACAAATTCAAGTTGCTGGAA+TGG | 0.489970 | 1.4:+24147755 | MS.gene88632:CDS |
| ACAGCAATGTAGGCATGAAC+TGG | 0.498369 | 1.4:-24148414 | None:intergenic |
| TTGTTACCAGTATCCTCCAA+TGG | 0.499727 | 1.4:-24144809 | None:intergenic |
| AAGAAGGCATTGAAGAAGAA+GGG | 0.500932 | 1.4:-24144772 | None:intergenic |
| AGGTAGGATGTTCTACCGCC+TGG | 0.514003 | 1.4:-24148438 | None:intergenic |
| CTCTGCAGTCTTATGAGACC+TGG | 0.516752 | 1.4:+24147798 | MS.gene88632:CDS |
| TAGGTTGGATCCTTTGCTAG+AGG | 0.519842 | 1.4:+24147905 | MS.gene88632:intron |
| CTAAGTCGTTCTAGTTCCTC+CGG | 0.524065 | 1.4:-24146495 | None:intergenic |
| ACTAATCCTTGTGGAGGCAA+AGG | 0.534041 | 1.4:+24148557 | MS.gene88632:CDS |
| CGGCAGCTGTTGAAAGAGGA+TGG | 0.535360 | 1.4:+24144879 | MS.gene88632:CDS |
| CTTACCGCATTCACCCGAAA+AGG | 0.540747 | 1.4:-24147980 | None:intergenic |
| ATCAGGAAAAGAAGTGATTG+TGG | 0.556374 | 1.4:+24148473 | MS.gene88632:CDS |
| CAAGGAGGGGCTCGACATAC+CGG | 0.557898 | 1.4:+24149057 | MS.gene88632:CDS |
| AAGAAATAATCCTCTAGCAA+AGG | 0.559960 | 1.4:-24147915 | None:intergenic |
| TTGCAAAATGCAGAGACAGT+TGG | 0.560365 | 1.4:+24148870 | MS.gene88632:CDS |
| CACAAACCTTTGCCTCCACA+AGG | 0.561116 | 1.4:-24148563 | None:intergenic |
| ATCACCTTAAGCTCAAGAAT+AGG | 0.564561 | 1.4:-24147603 | None:intergenic |
| GACCAATCATTGGCAAGTTG+AGG | 0.569625 | 1.4:-24144929 | None:intergenic |
| TTCGGATGCATTATCAGAGA+TGG | 0.570257 | 1.4:-24147416 | None:intergenic |
| AAATTCAAGTTGCTGGAATG+GGG | 0.571305 | 1.4:+24147757 | MS.gene88632:CDS |
| GAAGTTCTATTGAGAGTACA+AGG | 0.574180 | 1.4:+24149039 | MS.gene88632:CDS |
| ATGACGGCAGCTGTTGAAAG+AGG | 0.575603 | 1.4:+24144875 | MS.gene88632:CDS |
| GGTTTAGTTTGCCCCAAACA+AGG | 0.581478 | 1.4:+24148891 | MS.gene88632:CDS |
| TTCTATTGAGAGTACAAGGA+GGG | 0.583807 | 1.4:+24149043 | MS.gene88632:CDS |
| CGAAGCTCAGACATTTCTTG+AGG | 0.591185 | 1.4:+24147435 | MS.gene88632:CDS |
| AAAGAACAAGCAGGTTATGA+CGG | 0.597208 | 1.4:+24144859 | MS.gene88632:CDS |
| AAATTGAATTACCTTGTTTG+GGG | 0.599157 | 1.4:-24148902 | None:intergenic |
| ACCGCCTGGAACAGCAATGT+AGG | 0.599543 | 1.4:-24148424 | None:intergenic |
| GGTGTCCAAGAAGAAGAAGA+AGG | 0.608969 | 1.4:-24144788 | None:intergenic |
| AATCATTGGCAAGTTGAGGA+AGG | 0.609879 | 1.4:-24144925 | None:intergenic |
| GTTGTGACGCAAACGTGTGT+TGG | 0.621291 | 1.4:-24144750 | None:intergenic |
| AAGTAGACCACTAATCCTTG+TGG | 0.623475 | 1.4:+24148548 | MS.gene88632:CDS |
| AATTCAAGTTGCTGGAATGG+GGG | 0.626295 | 1.4:+24147758 | MS.gene88632:CDS |
| GTGTTGGAAGTAGAAGGTGG+TGG | 0.630075 | 1.4:-24144734 | None:intergenic |
| AAGAGGACAGATGACTGCAA+TGG | 0.637867 | 1.4:-24146403 | None:intergenic |
| AGTCTTATGAGACCTGGTGA+AGG | 0.644139 | 1.4:+24147804 | MS.gene88632:CDS |
| CATACGAGAAGTCCTTCACC+AGG | 0.653315 | 1.4:-24147816 | None:intergenic |
| TCTATTGAGAGTACAAGGAG+GGG | 0.656158 | 1.4:+24149044 | MS.gene88632:CDS |
| GATATGGACAAAGAACAAGC+AGG | 0.656378 | 1.4:+24144850 | MS.gene88632:CDS |
| TTGTGGTAGATCAACAGGGT+CGG | 0.659138 | 1.4:+24148490 | MS.gene88632:CDS |
| GCCTACATTGCTGTTCCAGG+CGG | 0.659994 | 1.4:+24148423 | MS.gene88632:CDS |
| TAGACCACTAATCCTTGTGG+AGG | 0.673279 | 1.4:+24148551 | MS.gene88632:CDS |
| AACTTGAATTTGTGTCACAG+TGG | 0.683036 | 1.4:-24147745 | None:intergenic |
| GTGATTGTGGTAGATCAACA+GGG | 0.728094 | 1.4:+24148486 | MS.gene88632:CDS |
| ACTAGAACGACTTAGACCTG+AGG | 0.735230 | 1.4:+24146503 | MS.gene88632:CDS |
| GTTCTATTGAGAGTACAAGG+AGG | 0.743766 | 1.4:+24149042 | MS.gene88632:CDS |
| CGTGTGTTGGAAGTAGAAGG+TGG | 0.751214 | 1.4:-24144737 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATGCAATTTTTTTAAT+AGG | - | chr1.4:24145055-24145074 | None:intergenic | 10.0% |
| !!! | AAAATGCAATTTTTTTAATA+GGG | - | chr1.4:24145054-24145073 | None:intergenic | 10.0% |
| !!! | TATTAAAAAAATTGCATTTT+TGG | + | chr1.4:24145054-24145073 | MS.gene88632:intron | 10.0% |
| !! | AGATTAAAATGAAAAACAAA+AGG | - | chr1.4:24146082-24146101 | None:intergenic | 15.0% |
| !! | ATTAAAATGAAAAACAAAAG+GGG | - | chr1.4:24146080-24146099 | None:intergenic | 15.0% |
| !! | GATTAAAATGAAAAACAAAA+GGG | - | chr1.4:24146081-24146100 | None:intergenic | 15.0% |
| !! | TACATTATTGAAATTGAAAA+TGG | - | chr1.4:24147299-24147318 | None:intergenic | 15.0% |
| !! | TTTAAAAAAAGTTGCAATTA+TGG | - | chr1.4:24145132-24145151 | None:intergenic | 15.0% |
| !!! | AAATGCAATTTTTTTAATAG+GGG | - | chr1.4:24145053-24145072 | None:intergenic | 15.0% |
| !!! | AACAATTGGATTTAAAATAT+AGG | - | chr1.4:24145304-24145323 | None:intergenic | 15.0% |
| !!! | TATTTAGTCTTCAAAATTTT+AGG | + | chr1.4:24145912-24145931 | MS.gene88632:intron | 15.0% |
| !!! | TTTTATGATATTTGGAATTT+TGG | + | chr1.4:24146364-24146383 | MS.gene88632:intron | 15.0% |
| !!! | TTTTGCCATTTTTTTTAATA+GGG | + | chr1.4:24145228-24145247 | MS.gene88632:intron | 15.0% |
| !! | AAATGGAAACAAATAACAAA+AGG | - | chr1.4:24145342-24145361 | None:intergenic | 20.0% |
| !! | AAATTAACCAAATACTTAAG+TGG | + | chr1.4:24145958-24145977 | MS.gene88632:intron | 20.0% |
| !! | AATGGAAACAAATAACAAAA+GGG | - | chr1.4:24145341-24145360 | None:intergenic | 20.0% |
| !! | AGGTATATAAATATTAGTAG+GGG | + | chr1.4:24147455-24147474 | MS.gene88632:intron | 20.0% |
| !! | GAGGTATATAAATATTAGTA+GGG | + | chr1.4:24147454-24147473 | MS.gene88632:intron | 20.0% |
| !! | GATGAAATTTAAACACAAAA+TGG | - | chr1.4:24145359-24145378 | None:intergenic | 20.0% |
| !! | TAATGTGATACTAAAACAAT+TGG | - | chr1.4:24145318-24145337 | None:intergenic | 20.0% |
| !! | TGAGGTATATAAATATTAGT+AGG | + | chr1.4:24147453-24147472 | MS.gene88632:intron | 20.0% |
| !! | TTGTAGTTAATTTACTTGAT+TGG | + | chr1.4:24146544-24146563 | MS.gene88632:CDS | 20.0% |
| !!! | AATGCAATTTTTTTAATAGG+GGG | - | chr1.4:24145052-24145071 | None:intergenic | 20.0% |
| !!! | ACTTTTATTTTAATGAACTC+CGG | - | chr1.4:24146285-24146304 | None:intergenic | 20.0% |
| !!! | CAACTTTTTTTAAAGATAAG+GGG | + | chr1.4:24145138-24145157 | MS.gene88632:intron | 20.0% |
| !!! | CTTTTGCCATTTTTTTTAAT+AGG | + | chr1.4:24145227-24145246 | MS.gene88632:intron | 20.0% |
| !!! | GCAACTTTTTTTAAAGATAA+GGG | + | chr1.4:24145137-24145156 | MS.gene88632:intron | 20.0% |
| !!! | TGCAACTTTTTTTAAAGATA+AGG | + | chr1.4:24145136-24145155 | MS.gene88632:intron | 20.0% |
| !!! | TTAATTTGTTGATACATGAT+TGG | + | chr1.4:24146185-24146204 | MS.gene88632:intron | 20.0% |
| !!! | TTTGCCATTTTTTTTAATAG+GGG | + | chr1.4:24145229-24145248 | MS.gene88632:intron | 20.0% |
| ! | AAACAAGGAAAACTAATATC+AGG | - | chr1.4:24146805-24146824 | None:intergenic | 25.0% |
| ! | AAATTCTTGAATCTCTATTC+CGG | - | chr1.4:24149079-24149098 | None:intergenic | 25.0% |
| ! | ACAAAAAATCAAAGAAAGTG+TGG | + | chr1.4:24144828-24144847 | MS.gene88632:CDS | 25.0% |
| ! | ACAAATTGAATTACCTTGTT+TGG | - | chr1.4:24148907-24148926 | None:intergenic | 25.0% |
| ! | ACGATGAATGTTTGATATTA+TGG | + | chr1.4:24148331-24148350 | MS.gene88632:intron | 25.0% |
| ! | ACTTTCAGTTTAAATCTTTC+AGG | + | chr1.4:24147671-24147690 | MS.gene88632:intron | 25.0% |
| ! | AGATTTAAACTGAAAGTAAG+AGG | - | chr1.4:24147668-24147687 | None:intergenic | 25.0% |
| ! | AGGAAATAAACCGTTAAAAA+CGG | + | chr1.4:24148984-24149003 | MS.gene88632:intron | 25.0% |
| ! | ATTGAAGTCTTCAATTACAT+TGG | + | chr1.4:24145989-24146008 | MS.gene88632:intron | 25.0% |
| ! | CGTTTAAGCCTAAAATATAA+TGG | - | chr1.4:24144989-24145008 | None:intergenic | 25.0% |
| ! | GGAGTTCATTAAAATAAAAG+TGG | + | chr1.4:24146284-24146303 | MS.gene88632:intron | 25.0% |
| ! | TAAAATACATGACCAATCAT+TGG | - | chr1.4:24144942-24144961 | None:intergenic | 25.0% |
| ! | TATTTCTTTCTACTTAGTGT+TGG | + | chr1.4:24145416-24145435 | MS.gene88632:intron | 25.0% |
| ! | TCTAGACATAGAATAATCAA+CGG | - | chr1.4:24147029-24147048 | None:intergenic | 25.0% |
| ! | TTTGGATGCACAAAATAAAA+AGG | + | chr1.4:24146446-24146465 | MS.gene88632:CDS | 25.0% |
| !! | AAATAGAGTTTGAGTTATGT+TGG | + | chr1.4:24146244-24146263 | MS.gene88632:intron | 25.0% |
| !! | AAATTGAATTACCTTGTTTG+GGG | - | chr1.4:24148905-24148924 | None:intergenic | 25.0% |
| !! | AACCCTTTCCATTATATTTT+AGG | + | chr1.4:24144978-24144997 | MS.gene88632:intron | 25.0% |
| !! | AAGCCTAAAATATAATGGAA+AGG | - | chr1.4:24144984-24145003 | None:intergenic | 25.0% |
| !! | AGCCTAAAATATAATGGAAA+GGG | - | chr1.4:24144983-24145002 | None:intergenic | 25.0% |
| !! | AGGATTATTTCTTGTTCATT+CGG | + | chr1.4:24147925-24147944 | MS.gene88632:CDS | 25.0% |
| !! | ATTGTCTTGTTAATATGAGA+CGG | - | chr1.4:24148642-24148661 | None:intergenic | 25.0% |
| !! | CAAATTGAATTACCTTGTTT+GGG | - | chr1.4:24148906-24148925 | None:intergenic | 25.0% |
| !! | CATTCATAAGGAAGATATTT+TGG | + | chr1.4:24146143-24146162 | MS.gene88632:intron | 25.0% |
| !! | GAATGCAGCAATTATATTTT+CGG | - | chr1.4:24147371-24147390 | None:intergenic | 25.0% |
| !! | TATTACTACCAATTTTCTGA+GGG | + | chr1.4:24147202-24147221 | MS.gene88632:intron | 25.0% |
| !! | TGGAAATGTTTTTCACATTT+AGG | + | chr1.4:24146205-24146224 | MS.gene88632:intron | 25.0% |
| !! | TTATTACTACCAATTTTCTG+AGG | + | chr1.4:24147201-24147220 | MS.gene88632:intron | 25.0% |
| !!! | ATATTGATTCAGCAAAAACA+AGG | - | chr1.4:24146820-24146839 | None:intergenic | 25.0% |
| !!! | TTGCCATTTTTTTTAATAGG+GGG | + | chr1.4:24145230-24145249 | MS.gene88632:intron | 25.0% |
| !!! | TTTTAAGTACAGAGAATTGA+AGG | - | chr1.4:24148011-24148030 | None:intergenic | 25.0% |
| AACGGTCAAAATCTTTCTTT+AGG | + | chr1.4:24147886-24147905 | MS.gene88632:intron | 30.0% | |
| AACGGTTTATTTCCTGAATA+GGG | - | chr1.4:24148979-24148998 | None:intergenic | 30.0% | |
| AAGAAATAATCCTCTAGCAA+AGG | - | chr1.4:24147918-24147937 | None:intergenic | 30.0% | |
| AAGTTGGAATGACATTCATA+AGG | + | chr1.4:24146131-24146150 | MS.gene88632:intron | 30.0% | |
| AATACTCAAGAAGCTTCAAA+TGG | - | chr1.4:24147636-24147655 | None:intergenic | 30.0% | |
| ACAAATTTGATCCAATGTCT+TGG | + | chr1.4:24146108-24146127 | MS.gene88632:intron | 30.0% | |
| ACTAAATCAGAGTTTAGCAT+CGG | - | chr1.4:24148797-24148816 | None:intergenic | 30.0% | |
| ACTACACATGTCATATCTAT+AGG | - | chr1.4:24145564-24145583 | None:intergenic | 30.0% | |
| ACTTTCTACTTGAAGAAATG+TGG | + | chr1.4:24147241-24147260 | MS.gene88632:intron | 30.0% | |
| AGCATATTTCCCTAAACATA+GGG | + | chr1.4:24145199-24145218 | MS.gene88632:intron | 30.0% | |
| AGTTAATTTACTTGATTGGC+AGG | + | chr1.4:24146548-24146567 | MS.gene88632:CDS | 30.0% | |
| ATGTCATATCTATAGGCAAT+GGG | - | chr1.4:24145557-24145576 | None:intergenic | 30.0% | |
| ATGTGGTTGTTTATATTTGC+TGG | + | chr1.4:24147258-24147277 | MS.gene88632:intron | 30.0% | |
| ATTACAAGTAACTGGTGAAA+AGG | - | chr1.4:24148386-24148405 | None:intergenic | 30.0% | |
| ATTGTGTTTGCATTTGCAAA+TGG | + | chr1.4:24145380-24145399 | MS.gene88632:intron | 30.0% | |
| ATTTCTATGAGAACTATCCA+AGG | - | chr1.4:24145855-24145874 | None:intergenic | 30.0% | |
| ATTTGCAAATGCAAACACAA+TGG | - | chr1.4:24145381-24145400 | None:intergenic | 30.0% | |
| CAAAGACAACTAGAAATAGA+TGG | - | chr1.4:24148669-24148688 | None:intergenic | 30.0% | |
| CATTGTTGAGATTATGAAGA+AGG | - | chr1.4:24145805-24145824 | None:intergenic | 30.0% | |
| GAAGAAACTAACGGAAAATA+AGG | - | chr1.4:24148932-24148951 | None:intergenic | 30.0% | |
| GGTGAAATTGAAGAAACTAA+CGG | - | chr1.4:24148941-24148960 | None:intergenic | 30.0% | |
| GTCAAAATCTTTCTTTAGGT+TGG | + | chr1.4:24147890-24147909 | MS.gene88632:intron | 30.0% | |
| TAACGGTTTATTTCCTGAAT+AGG | - | chr1.4:24148980-24148999 | None:intergenic | 30.0% | |
| TACCTGTCAGAATTAAAATC+AGG | + | chr1.4:24148456-24148475 | MS.gene88632:CDS | 30.0% | |
| TCACAAACCACTTAAGTATT+TGG | - | chr1.4:24145968-24145987 | None:intergenic | 30.0% | |
| TGAAAATTCAGCTTTCATTG+TGG | + | chr1.4:24145746-24145765 | MS.gene88632:intron | 30.0% | |
| TTTCTATGAGAACTATCCAA+GGG | - | chr1.4:24145854-24145873 | None:intergenic | 30.0% | |
| ! | AATCAAAGAAAGTGTGGATA+TGG | + | chr1.4:24144834-24144853 | MS.gene88632:CDS | 30.0% |
| ! | ATTGCAACTTTTGCAAAGTT+AGG | - | chr1.4:24145277-24145258 | None:intergenic | 30.0% |
| ! | CTCGTATGTATTCATTTTGA+AGG | + | chr1.4:24147831-24147850 | MS.gene88632:intron | 30.0% |
| ! | CTTTGCAAAAGTTGCAATTT+TGG | + | chr1.4:24145026-24145045 | MS.gene88632:intron | 30.0% |
| ! | CTTTGCAAAAGTTGCAATTT+TGG | - | chr1.4:24145045-24145026 | None:intergenic | 30.0% |
| ! | CTTTTGAACCTCTAACATAA+GGG | - | chr1.4:24145179-24145198 | None:intergenic | 30.0% |
| ! | TCTTTTGAACCTCTAACATA+AGG | - | chr1.4:24145180-24145199 | None:intergenic | 30.0% |
| ! | TGCAACTTTTGCAAAGTTAA+GGG | + | chr1.4:24145260-24145279 | MS.gene88632:intron | 30.0% |
| ! | TTGCAACCTTTGAATTTTGT+AGG | + | chr1.4:24147530-24147549 | MS.gene88632:intron | 30.0% |
| ! | TTGCAACTTTTGCAAAGTTA+AGG | + | chr1.4:24145259-24145278 | MS.gene88632:intron | 30.0% |
| ! | TTGCAACTTTTGCAAAGTTA+GGG | - | chr1.4:24145278-24145259 | None:intergenic | 30.0% |
| !! | AAGATTTTGACCGTTAAGAA+TGG | - | chr1.4:24147881-24147900 | None:intergenic | 30.0% |
| !! | AGTCTTCAAAATTTTAGGAG+AGG | + | chr1.4:24145917-24145936 | MS.gene88632:intron | 30.0% |
| !! | CATCTATTTCTAGTTGTCTT+TGG | + | chr1.4:24148667-24148686 | MS.gene88632:intron | 30.0% |
| !! | TTAACCAAACTAGTCTTTCA+TGG | + | chr1.4:24148270-24148289 | MS.gene88632:intron | 30.0% |
| !! | TTGGTGATTTTGAATTTTGC+CGG | + | chr1.4:24146263-24146282 | MS.gene88632:intron | 30.0% |
| !!! | TGATTTTAATTCTGACAGGT+AGG | - | chr1.4:24148457-24148476 | None:intergenic | 30.0% |
| !!! | TTCCTGATTTTAATTCTGAC+AGG | - | chr1.4:24148461-24148480 | None:intergenic | 30.0% |
| !!! | TTTGAGCGATTTTCAAGTAT+CGG | + | chr1.4:24146924-24146943 | MS.gene88632:intron | 30.0% |
| AAAGAACAAGCAGGTTATGA+CGG | + | chr1.4:24144859-24144878 | MS.gene88632:CDS | 35.0% | |
| AACTTGAATTTGTGTCACAG+TGG | - | chr1.4:24147748-24147767 | None:intergenic | 35.0% | |
| ACAACTTACCAACATGTCAT+AGG | - | chr1.4:24148120-24148139 | None:intergenic | 35.0% | |
| ACCAGTTACTTGTAATAGCA+GGG | + | chr1.4:24148390-24148409 | MS.gene88632:intron | 35.0% | |
| ACTCAAATTTCGCAATTAGG+AGG | - | chr1.4:24145473-24145492 | None:intergenic | 35.0% | |
| ATCACCTTAAGCTCAAGAAT+AGG | - | chr1.4:24147606-24147625 | None:intergenic | 35.0% | |
| ATCAGGAAAAGAAGTGATTG+TGG | + | chr1.4:24148473-24148492 | MS.gene88632:CDS | 35.0% | |
| ATGTCTTTACTGTCGCAAAT+TGG | + | chr1.4:24144695-24144714 | MS.gene88632:CDS | 35.0% | |
| ATTCAAAGGTTGCAACTGTA+AGG | - | chr1.4:24147525-24147544 | None:intergenic | 35.0% | |
| CAAGTGCCTACAAAATTCAA+AGG | - | chr1.4:24147539-24147558 | None:intergenic | 35.0% | |
| CATATTTCCCTAAACATAGG+GGG | + | chr1.4:24145201-24145220 | MS.gene88632:intron | 35.0% | |
| CATGTCATATCTATAGGCAA+TGG | - | chr1.4:24145558-24145577 | None:intergenic | 35.0% | |
| CATTAGGTAGTCCTTAAAGA+TGG | - | chr1.4:24146993-24147012 | None:intergenic | 35.0% | |
| CATTGCTTTCTTCTGTTCTT+CGG | - | chr1.4:24147707-24147726 | None:intergenic | 35.0% | |
| CTAACTCAACCATACAAAAC+CGG | - | chr1.4:24145621-24145640 | None:intergenic | 35.0% | |
| CTTATTTCCATAAAGTCTCC+GGG | + | chr1.4:24148146-24148165 | MS.gene88632:intron | 35.0% | |
| CTTGTTAATATGAGACGGAA+CGG | - | chr1.4:24148637-24148656 | None:intergenic | 35.0% | |
| GAGCATATTTCCCTAAACAT+AGG | + | chr1.4:24145198-24145217 | MS.gene88632:intron | 35.0% | |
| GCAACTCAAATTTCGCAATT+AGG | - | chr1.4:24145476-24145495 | None:intergenic | 35.0% | |
| GCATATTTCCCTAAACATAG+GGG | + | chr1.4:24145200-24145219 | MS.gene88632:intron | 35.0% | |
| GCATATTTCCCTTATGTTAG+AGG | + | chr1.4:24145168-24145187 | MS.gene88632:intron | 35.0% | |
| GCTAATTTCAATAGCTATCC+CGG | - | chr1.4:24148167-24148186 | None:intergenic | 35.0% | |
| GCTTATTTCCATAAAGTCTC+CGG | + | chr1.4:24148145-24148164 | MS.gene88632:intron | 35.0% | |
| GTGTAGTGTTTGTAAAGCTT+GGG | + | chr1.4:24145577-24145596 | MS.gene88632:intron | 35.0% | |
| TAGAATAATCAACGGATGAC+AGG | - | chr1.4:24147021-24147040 | None:intergenic | 35.0% | |
| TATCAAACATTCATCGTCCA+AGG | - | chr1.4:24148328-24148347 | None:intergenic | 35.0% | |
| TGGAAATTCTGCTTTCATTG+CGG | + | chr1.4:24145436-24145455 | MS.gene88632:intron | 35.0% | |
| TGGCCCCCTATTAAAAAAAA+TGG | - | chr1.4:24145236-24145255 | None:intergenic | 35.0% | |
| TGTCGAAACGTCAAAAATTG+TGG | - | chr1.4:24146475-24146494 | None:intergenic | 35.0% | |
| TGTGTAGTGTTTGTAAAGCT+TGG | + | chr1.4:24145576-24145595 | MS.gene88632:intron | 35.0% | |
| TGTTTGCATTTGCAAATGGT+TGG | + | chr1.4:24145384-24145403 | MS.gene88632:intron | 35.0% | |
| TTCAAACGACTTTCAAGCAT+TGG | - | chr1.4:24146652-24146671 | None:intergenic | 35.0% | |
| TTCTATGAGAACTATCCAAG+GGG | - | chr1.4:24145853-24145872 | None:intergenic | 35.0% | |
| TTTGGCGATAGTAAAATGCT+TGG | + | chr1.4:24146161-24146180 | MS.gene88632:intron | 35.0% | |
| TTTGTGCATGCATTAGCTAT+TGG | + | chr1.4:24148580-24148599 | MS.gene88632:intron | 35.0% | |
| ! | AATTTTTGACGTTTCGACAC+CGG | + | chr1.4:24146476-24146495 | MS.gene88632:CDS | 35.0% |
| ! | AGATGGCAAATACAGTCTTT+TGG | - | chr1.4:24147402-24147421 | None:intergenic | 35.0% |
| ! | ATTTTGTAGGCACTTGAACA+TGG | + | chr1.4:24147543-24147562 | MS.gene88632:intron | 35.0% |
| ! | CATCTTTAAGGACTACCTAA+TGG | + | chr1.4:24146991-24147010 | MS.gene88632:intron | 35.0% |
| ! | GAAGTTCTATTGAGAGTACA+AGG | + | chr1.4:24149039-24149058 | MS.gene88632:CDS | 35.0% |
| ! | GCAACTTTTGCAAAGTTAAG+GGG | + | chr1.4:24145261-24145280 | MS.gene88632:intron | 35.0% |
| ! | TCTAAAATGATATCAGAGCC+TGG | + | chr1.4:24145654-24145673 | MS.gene88632:intron | 35.0% |
| ! | TGCAACTTTTGCAAAGTTAG+GGG | - | chr1.4:24145022-24145041 | None:intergenic | 35.0% |
| ! | TGCTAGTGAGAAGGATATTT+TGG | + | chr1.4:24146428-24146447 | MS.gene88632:CDS | 35.0% |
| ! | TTCTATTGAGAGTACAAGGA+GGG | + | chr1.4:24149043-24149062 | MS.gene88632:CDS | 35.0% |
| ! | TTGAAGCTTCTTGAGTATTG+AGG | + | chr1.4:24147637-24147656 | MS.gene88632:intron | 35.0% |
| !! | AAATTCAAGTTGCTGGAATG+GGG | + | chr1.4:24147757-24147776 | MS.gene88632:CDS | 35.0% |
| !! | AAGAAGGCATTGAAGAAGAA+GGG | - | chr1.4:24144775-24144794 | None:intergenic | 35.0% |
| !! | AAGTTATTTTCTCACCCGTA+AGG | + | chr1.4:24146845-24146864 | MS.gene88632:intron | 35.0% |
| !! | AATATTAGTAGGGGTGTTAC+AGG | + | chr1.4:24147464-24147483 | MS.gene88632:intron | 35.0% |
| !! | ACAAATTCAAGTTGCTGGAA+TGG | + | chr1.4:24147755-24147774 | MS.gene88632:CDS | 35.0% |
| !! | ATACAGTCTTTTGGCTGTTT+TGG | - | chr1.4:24147393-24147412 | None:intergenic | 35.0% |
| !! | ATTTGGAATTTTGGCCATGA+TGG | + | chr1.4:24146373-24146392 | MS.gene88632:intron | 35.0% |
| !! | CAAATTCAAGTTGCTGGAAT+GGG | + | chr1.4:24147756-24147775 | MS.gene88632:CDS | 35.0% |
| !! | CTTCAAAATTTTAGGAGAGG+AGG | + | chr1.4:24145920-24145939 | MS.gene88632:intron | 35.0% |
| !!! | ACTGGAAAAGCCGTTTTTAA+CGG | - | chr1.4:24148997-24149016 | None:intergenic | 35.0% |
| AAAAGTGACCCCCTATGTTT+AGG | - | chr1.4:24145212-24145231 | None:intergenic | 40.0% | |
| AAACGTGTGTTGGAAGTAGA+AGG | - | chr1.4:24144743-24144762 | None:intergenic | 40.0% | |
| AAAGTGACCCCCTATGTTTA+GGG | - | chr1.4:24145211-24145230 | None:intergenic | 40.0% | |
| AAGGACTGATGTTCGTGATA+AGG | - | chr1.4:24145786-24145805 | None:intergenic | 40.0% | |
| AAGTAGACCACTAATCCTTG+TGG | + | chr1.4:24148548-24148567 | MS.gene88632:CDS | 40.0% | |
| AATTTCGCAATTAGGAGGCT+AGG | - | chr1.4:24145468-24145487 | None:intergenic | 40.0% | |
| AATTTGTGTCACAGTGGCTT+TGG | - | chr1.4:24147742-24147761 | None:intergenic | 40.0% | |
| ACATAGCACCTATGACATGT+TGG | + | chr1.4:24148109-24148128 | MS.gene88632:intron | 40.0% | |
| ACTCAAGAAGCTTCAAATGG+AGG | - | chr1.4:24147633-24147652 | None:intergenic | 40.0% | |
| AGCAAAGCTGCCATTCTTAA+CGG | + | chr1.4:24147868-24147887 | MS.gene88632:intron | 40.0% | |
| AGCCTAAAGTATGGACAATG+CGG | - | chr1.4:24145699-24145718 | None:intergenic | 40.0% | |
| AGTGATTGTGGTAGATCAAC+AGG | + | chr1.4:24148485-24148504 | MS.gene88632:CDS | 40.0% | |
| AGTGTCTCATATAGTCCGTA+CGG | + | chr1.4:24146622-24146641 | MS.gene88632:intron | 40.0% | |
| ATAGGGAAACAGACAACAGT+TGG | - | chr1.4:24148962-24148981 | None:intergenic | 40.0% | |
| ATCCAAAAACTGCTGAGAAG+AGG | + | chr1.4:24145085-24145104 | MS.gene88632:intron | 40.0% | |
| ATTTCGCAATTAGGAGGCTA+GGG | - | chr1.4:24145467-24145486 | None:intergenic | 40.0% | |
| CAATGCCTTCTTCTTCTTCT+TGG | + | chr1.4:24144783-24144802 | MS.gene88632:CDS | 40.0% | |
| CACCAGTTACTTGTAATAGC+AGG | + | chr1.4:24148389-24148408 | MS.gene88632:intron | 40.0% | |
| CATTCCAACTTCCAAGACAT+TGG | - | chr1.4:24146122-24146141 | None:intergenic | 40.0% | |
| CCAGTGACATCACTAAAAGT+TGG | + | chr1.4:24149012-24149031 | MS.gene88632:CDS | 40.0% | |
| CCTTAAAGATGGCAAATGCT+GGG | - | chr1.4:24146982-24147001 | None:intergenic | 40.0% | |
| CGGCAAAGAATTGCAATTGT+TGG | + | chr1.4:24148510-24148529 | MS.gene88632:CDS | 40.0% | |
| CTCAAGAAATGTCTGAGCTT+CGG | - | chr1.4:24147437-24147456 | None:intergenic | 40.0% | |
| CTCATCTTCCCTCAGAAAAT+TGG | - | chr1.4:24147213-24147232 | None:intergenic | 40.0% | |
| CTTAAAGATGGCAAATGCTG+GGG | - | chr1.4:24146981-24147000 | None:intergenic | 40.0% | |
| GAACCAATGAGCCTAAAGTA+TGG | - | chr1.4:24145708-24145727 | None:intergenic | 40.0% | |
| GAAGAGTCACATGTGATCTA+CGG | - | chr1.4:24146954-24146973 | None:intergenic | 40.0% | |
| GATATGGACAAAGAACAAGC+AGG | + | chr1.4:24144850-24144869 | MS.gene88632:CDS | 40.0% | |
| GGATTCATCAGAGTTTCTCT+TGG | - | chr1.4:24148365-24148384 | None:intergenic | 40.0% | |
| GTGATTGTGGTAGATCAACA+GGG | + | chr1.4:24148486-24148505 | MS.gene88632:CDS | 40.0% | |
| TCCAACACCTTCACTATGTT+GGG | + | chr1.4:24145509-24145528 | MS.gene88632:intron | 40.0% | |
| TCCCTGCTATTACAAGTAAC+TGG | - | chr1.4:24148394-24148413 | None:intergenic | 40.0% | |
| TCCTTAAAGATGGCAAATGC+TGG | - | chr1.4:24146983-24147002 | None:intergenic | 40.0% | |
| TCCTTCTCACTAGCAAAAAG+AGG | - | chr1.4:24146423-24146442 | None:intergenic | 40.0% | |
| TCTTGTTCATTCGGAATGCT+TGG | + | chr1.4:24147934-24147953 | MS.gene88632:CDS | 40.0% | |
| TGAGCCTATTCTTGAGCTTA+AGG | + | chr1.4:24147599-24147618 | MS.gene88632:CDS | 40.0% | |
| TGATCCAATGTCTTGGAAGT+TGG | + | chr1.4:24146115-24146134 | MS.gene88632:intron | 40.0% | |
| TGCATTTGCAAATGGTTGGT+TGG | + | chr1.4:24145388-24145407 | MS.gene88632:intron | 40.0% | |
| TGTCCATACTTTAGGCTCAT+TGG | + | chr1.4:24145702-24145721 | MS.gene88632:intron | 40.0% | |
| TGTTGTCTGTTTCCCTATTC+AGG | + | chr1.4:24148964-24148983 | MS.gene88632:intron | 40.0% | |
| TTAATATGAGACGGAACGGA+AGG | - | chr1.4:24148633-24148652 | None:intergenic | 40.0% | |
| TTAGGAGAGGAGGAACAATT+TGG | + | chr1.4:24145930-24145949 | MS.gene88632:intron | 40.0% | |
| TTCCTCAACTTGCCAATGAT+TGG | + | chr1.4:24144927-24144946 | MS.gene88632:CDS | 40.0% | |
| TTCGGATGCATTATCAGAGA+TGG | - | chr1.4:24147419-24147438 | None:intergenic | 40.0% | |
| TTCTTCTTCTTGGACACCAT+TGG | + | chr1.4:24144793-24144812 | MS.gene88632:CDS | 40.0% | |
| TTGCAAAATGCAGAGACAGT+TGG | + | chr1.4:24148870-24148889 | MS.gene88632:CDS | 40.0% | |
| TTGTACACAATTGCTCACTC+AGG | + | chr1.4:24147336-24147355 | MS.gene88632:intron | 40.0% | |
| TTGTCTGAGTCTGTCTGAAA+TGG | - | chr1.4:24148831-24148850 | None:intergenic | 40.0% | |
| TTGTTACCAGTATCCTCCAA+TGG | - | chr1.4:24144812-24144831 | None:intergenic | 40.0% | |
| ! | AATCATTGGCAAGTTGAGGA+AGG | - | chr1.4:24144928-24144947 | None:intergenic | 40.0% |
| ! | ACATTGCAAGCAGACCTTTT+CGG | + | chr1.4:24147966-24147985 | MS.gene88632:CDS | 40.0% |
| ! | CCAACTTTTAGTGATGTCAC+TGG | - | chr1.4:24149015-24149034 | None:intergenic | 40.0% |
| ! | GCAACTTTTGCAAAGTTAGG+GGG | - | chr1.4:24145021-24145040 | None:intergenic | 40.0% |
| ! | GCAGCAATTATATTTTCGGC+AGG | - | chr1.4:24147367-24147386 | None:intergenic | 40.0% |
| ! | GTTCTATTGAGAGTACAAGG+AGG | + | chr1.4:24149042-24149061 | MS.gene88632:CDS | 40.0% |
| ! | TCCTCTTTTTGCTAGTGAGA+AGG | + | chr1.4:24146419-24146438 | MS.gene88632:CDS | 40.0% |
| ! | TCTATTGAGAGTACAAGGAG+GGG | + | chr1.4:24149044-24149063 | MS.gene88632:CDS | 40.0% |
| ! | TGAGCCATGAAAGACTAGTT+TGG | - | chr1.4:24148277-24148296 | None:intergenic | 40.0% |
| !! | AATTCAAGTTGCTGGAATGG+GGG | + | chr1.4:24147758-24147777 | MS.gene88632:CDS | 40.0% |
| !! | CGGTTTTGTATGGTTGAGTT+AGG | + | chr1.4:24145619-24145638 | MS.gene88632:intron | 40.0% |
| !! | CTCAGCAGTTTTTGGATGAA+GGG | - | chr1.4:24145082-24145101 | None:intergenic | 40.0% |
| !! | GAAGAAGGCATTGAAGAAGA+AGG | - | chr1.4:24144776-24144795 | None:intergenic | 40.0% |
| !! | GTGACACAAATTCAAGTTGC+TGG | + | chr1.4:24147750-24147769 | MS.gene88632:CDS | 40.0% |
| !! | TCAGCAGTTTTTGGATGAAG+GGG | - | chr1.4:24145081-24145100 | None:intergenic | 40.0% |
| !! | TCTCAGCAGTTTTTGGATGA+AGG | - | chr1.4:24145083-24145102 | None:intergenic | 40.0% |
| !! | TTCCTTGTTATTTGCCGAAC+CGG | - | chr1.4:24146756-24146775 | None:intergenic | 40.0% |
| !!! | GCAATTATGGCCCCTTTTTT+GGG | - | chr1.4:24145119-24145138 | None:intergenic | 40.0% |
| !!! | TGCAATTATGGCCCCTTTTT+TGG | - | chr1.4:24145120-24145139 | None:intergenic | 40.0% |
| AACACCTTCACTATGTTGGG+GGG | + | chr1.4:24145512-24145531 | MS.gene88632:intron | 45.0% | |
| AACATCAACCCAATCTGTGC+CGG | + | chr1.4:24146734-24146753 | MS.gene88632:intron | 45.0% | |
| AAGAGGACAGATGACTGCAA+TGG | - | chr1.4:24146406-24146425 | None:intergenic | 45.0% | |
| ACAGCAATGTAGGCATGAAC+TGG | - | chr1.4:24148417-24148436 | None:intergenic | 45.0% | |
| ACTAATCCTTGTGGAGGCAA+AGG | + | chr1.4:24148557-24148576 | MS.gene88632:CDS | 45.0% | |
| ACTAGAACGACTTAGACCTG+AGG | + | chr1.4:24146503-24146522 | MS.gene88632:CDS | 45.0% | |
| ACTTCTGCTTAAAGGTGGTG+AGG | + | chr1.4:24146884-24146903 | MS.gene88632:intron | 45.0% | |
| CAACACCTTCACTATGTTGG+GGG | + | chr1.4:24145511-24145530 | MS.gene88632:intron | 45.0% | |
| CACCTTTAAGCAGAAGTCCA+GGG | - | chr1.4:24146881-24146900 | None:intergenic | 45.0% | |
| CCAACACCTTCACTATGTTG+GGG | + | chr1.4:24145510-24145529 | MS.gene88632:intron | 45.0% | |
| CCCAGCATTTGCCATCTTTA+AGG | + | chr1.4:24146979-24146998 | MS.gene88632:intron | 45.0% | |
| CGAAGCTCAGACATTTCTTG+AGG | + | chr1.4:24147435-24147454 | MS.gene88632:CDS | 45.0% | |
| CTCCAACACCTTCACTATGT+TGG | + | chr1.4:24145508-24145527 | MS.gene88632:intron | 45.0% | |
| CTCTACTCTCTCTACTTCCT+TGG | + | chr1.4:24148308-24148327 | MS.gene88632:intron | 45.0% | |
| GACCAATCATTGGCAAGTTG+AGG | - | chr1.4:24144932-24144951 | None:intergenic | 45.0% | |
| GACTGATGTTCGTGATAAGG+AGG | - | chr1.4:24145783-24145802 | None:intergenic | 45.0% | |
| GCACTTGAACATGGCTTAGA+TGG | + | chr1.4:24147552-24147571 | MS.gene88632:CDS | 45.0% | |
| GCCTAAAGTATGGACAATGC+GGG | - | chr1.4:24145698-24145717 | None:intergenic | 45.0% | |
| GGAACGGAAGGAGTAACATT+TGG | - | chr1.4:24148621-24148640 | None:intergenic | 45.0% | |
| GGTGTCCAAGAAGAAGAAGA+AGG | - | chr1.4:24144791-24144810 | None:intergenic | 45.0% | |
| TAGACCACTAATCCTTGTGG+AGG | + | chr1.4:24148551-24148570 | MS.gene88632:CDS | 45.0% | |
| TAGCTATCCCGGAGACTTTA+TGG | - | chr1.4:24148156-24148175 | None:intergenic | 45.0% | |
| TCCCGCATTGTCCATACTTT+AGG | + | chr1.4:24145694-24145713 | MS.gene88632:intron | 45.0% | |
| TTCGTGATAAGGAGGCTAGA+GGG | - | chr1.4:24145775-24145794 | None:intergenic | 45.0% | |
| TTCTTCTTGGACACCATTGG+AGG | + | chr1.4:24144796-24144815 | MS.gene88632:CDS | 45.0% | |
| TTGTGGTAGATCAACAGGGT+CGG | + | chr1.4:24148490-24148509 | MS.gene88632:CDS | 45.0% | |
| TTTCGCAATTAGGAGGCTAG+GGG | - | chr1.4:24145466-24145485 | None:intergenic | 45.0% | |
| TTTGCCTCCACAAGGATTAG+TGG | - | chr1.4:24148558-24148577 | None:intergenic | 45.0% | |
| ! | AGTCTTATGAGACCTGGTGA+AGG | + | chr1.4:24147804-24147823 | MS.gene88632:CDS | 45.0% |
| ! | CAAGTTGAGGAAGGTGAGAT+GGG | - | chr1.4:24144919-24144938 | None:intergenic | 45.0% |
| ! | CATTGCAAGCAGACCTTTTC+GGG | + | chr1.4:24147967-24147986 | MS.gene88632:CDS | 45.0% |
| ! | GGTGTTGGAGGTTACAATGA+AGG | - | chr1.4:24145498-24145517 | None:intergenic | 45.0% |
| ! | TAGGTTGGATCCTTTGCTAG+AGG | + | chr1.4:24147905-24147924 | MS.gene88632:intron | 45.0% |
| ! | TTTTCTCACCCGTAAGGATG+TGG | + | chr1.4:24146851-24146870 | MS.gene88632:intron | 45.0% |
| ! | TTTTCTGCTTGCTCATCCTC+AGG | - | chr1.4:24146522-24146541 | None:intergenic | 45.0% |
| !! | CAACATAGTGAAGGTGTTGG+AGG | - | chr1.4:24145510-24145529 | None:intergenic | 45.0% |
| !! | CAGCAGTTTTTGGATGAAGG+GGG | - | chr1.4:24145080-24145099 | None:intergenic | 45.0% |
| !! | CCATACAAAACCGGCTTGTA+TGG | - | chr1.4:24145612-24145631 | None:intergenic | 45.0% |
| !! | CCATACAAGCCGGTTTTGTA+TGG | + | chr1.4:24145609-24145628 | MS.gene88632:intron | 45.0% |
| !! | CTAAGTCGTTCTAGTTCCTC+CGG | - | chr1.4:24146498-24146517 | None:intergenic | 45.0% |
| !! | GGTTTAGTTTGCCCCAAACA+AGG | + | chr1.4:24148891-24148910 | MS.gene88632:CDS | 45.0% |
| !! | TTAGTAGGGGTGTTACAGGT+CGG | + | chr1.4:24147468-24147487 | MS.gene88632:intron | 45.0% |
| !!! | AATTATAATTTTATGATATT+TGG | + | chr1.4:24146356-24146375 | MS.gene88632:intron | 5.0% |
| !!! | TAAAAAAATAATATTTTCTT+TGG | - | chr1.4:24146025-24146044 | None:intergenic | 5.0% |
| AAAGATGGCAAATGCTGGGG+TGG | - | chr1.4:24146978-24146997 | None:intergenic | 50.0% | |
| AAGATGGCAAATGCTGGGGT+GGG | - | chr1.4:24146977-24146996 | None:intergenic | 50.0% | |
| AGGCCACGTGTCCCAAAAAA+GGG | + | chr1.4:24145105-24145124 | MS.gene88632:intron | 50.0% | |
| ATGACGGCAGCTGTTGAAAG+AGG | + | chr1.4:24144875-24144894 | MS.gene88632:CDS | 50.0% | |
| CACAAACCTTTGCCTCCACA+AGG | - | chr1.4:24148566-24148585 | None:intergenic | 50.0% | |
| CATACGAGAAGTCCTTCACC+AGG | - | chr1.4:24147819-24147838 | None:intergenic | 50.0% | |
| CCACCTTTAAGCAGAAGTCC+AGG | - | chr1.4:24146882-24146901 | None:intergenic | 50.0% | |
| CCTGGACTTCTGCTTAAAGG+TGG | + | chr1.4:24146879-24146898 | MS.gene88632:intron | 50.0% | |
| CGTGTGTTGGAAGTAGAAGG+TGG | - | chr1.4:24144740-24144759 | None:intergenic | 50.0% | |
| CTGCTTAAAGGTGGTGAGGT+CGG | + | chr1.4:24146888-24146907 | MS.gene88632:intron | 50.0% | |
| CTTACCGCATTCACCCGAAA+AGG | - | chr1.4:24147983-24148002 | None:intergenic | 50.0% | |
| GACCCTGGACTTCTGCTTAA+AGG | + | chr1.4:24146876-24146895 | MS.gene88632:intron | 50.0% | |
| GAGTCACATGTGATCTACGG+TGG | - | chr1.4:24146951-24146970 | None:intergenic | 50.0% | |
| GCAATGGCTGTACTCCATCA+TGG | - | chr1.4:24146390-24146409 | None:intergenic | 50.0% | |
| GTCTCATATAGTCCGTACGG+TGG | + | chr1.4:24146625-24146644 | MS.gene88632:intron | 50.0% | |
| GTGTTGGAAGTAGAAGGTGG+TGG | - | chr1.4:24144737-24144756 | None:intergenic | 50.0% | |
| GTTCGTGATAAGGAGGCTAG+AGG | - | chr1.4:24145776-24145795 | None:intergenic | 50.0% | |
| GTTGTGACGCAAACGTGTGT+TGG | - | chr1.4:24144753-24144772 | None:intergenic | 50.0% | |
| TCGTGATAAGGAGGCTAGAG+GGG | - | chr1.4:24145774-24145793 | None:intergenic | 50.0% | |
| TGAGAACTATCCAAGGGGTG+TGG | - | chr1.4:24145848-24145867 | None:intergenic | 50.0% | |
| TGGACACCATTGGAGGATAC+TGG | + | chr1.4:24144803-24144822 | MS.gene88632:CDS | 50.0% | |
| ! | CATGCCTACATTGCTGTTCC+AGG | + | chr1.4:24148420-24148439 | MS.gene88632:CDS | 50.0% |
| ! | CCCCAACATAGTGAAGGTGT+TGG | - | chr1.4:24145513-24145532 | None:intergenic | 50.0% |
| ! | CTCTGCAGTCTTATGAGACC+TGG | + | chr1.4:24147798-24147817 | MS.gene88632:CDS | 50.0% |
| ! | GAGAACTATCCAAGGGGTGT+GGG | - | chr1.4:24145847-24145866 | None:intergenic | 50.0% |
| ! | GCAAGTTGAGGAAGGTGAGA+TGG | - | chr1.4:24144920-24144939 | None:intergenic | 50.0% |
| ! | GGCCTCTTCTCAGCAGTTTT+TGG | - | chr1.4:24145090-24145109 | None:intergenic | 50.0% |
| ! | TTTTGACGTTTCGACACCGG+AGG | + | chr1.4:24146479-24146498 | MS.gene88632:CDS | 50.0% |
| !! | GGGTTGATGTTTCAGTTGCG+AGG | - | chr1.4:24146725-24146744 | None:intergenic | 50.0% |
| !! | TCAAGCATTGGTCCACCGTA+CGG | - | chr1.4:24146640-24146659 | None:intergenic | 50.0% |
| !! | TGCCGGTTCGGCAAATAACA+AGG | + | chr1.4:24146751-24146770 | MS.gene88632:intron | 50.0% |
| !!! | CAGACCTTTTCGGGTGAATG+CGG | + | chr1.4:24147976-24147995 | MS.gene88632:CDS | 50.0% |
| AATGCGGGATGCCCAACAAG+AGG | - | chr1.4:24145683-24145702 | None:intergenic | 55.0% | |
| ACCGCCTGGAACAGCAATGT+AGG | - | chr1.4:24148427-24148446 | None:intergenic | 55.0% | |
| AGATGGCAAATGCTGGGGTG+GGG | - | chr1.4:24146976-24146995 | None:intergenic | 55.0% | |
| AGGGTCCACCACATCCTTAC+GGG | - | chr1.4:24146862-24146881 | None:intergenic | 55.0% | |
| AGGTAGGATGTTCTACCGCC+TGG | - | chr1.4:24148441-24148460 | None:intergenic | 55.0% | |
| ATGCGGGATGCCCAACAAGA+GGG | - | chr1.4:24145682-24145701 | None:intergenic | 55.0% | |
| CAGGGTCCACCACATCCTTA+CGG | - | chr1.4:24146863-24146882 | None:intergenic | 55.0% | |
| CGGCAGCTGTTGAAAGAGGA+TGG | + | chr1.4:24144879-24144898 | MS.gene88632:CDS | 55.0% | |
| CGTGATAAGGAGGCTAGAGG+GGG | - | chr1.4:24145773-24145792 | None:intergenic | 55.0% | |
| GAGGCCACGTGTCCCAAAAA+AGG | + | chr1.4:24145104-24145123 | MS.gene88632:intron | 55.0% | |
| GCAGCTCTCACCATACAAGC+CGG | + | chr1.4:24145599-24145618 | MS.gene88632:intron | 55.0% | |
| GGCCACGTGTCCCAAAAAAG+GGG | + | chr1.4:24145106-24145125 | MS.gene88632:intron | 55.0% | |
| TCACTATGTTGGGGGGCGAA+GGG | + | chr1.4:24145519-24145538 | MS.gene88632:intron | 55.0% | |
| TCTCACCCGTAAGGATGTGG+TGG | + | chr1.4:24146854-24146873 | MS.gene88632:intron | 55.0% | |
| TTCACTATGTTGGGGGGCGA+AGG | + | chr1.4:24145518-24145537 | MS.gene88632:intron | 55.0% | |
| TTCGCCCCCCAACATAGTGA+AGG | - | chr1.4:24145519-24145538 | None:intergenic | 55.0% | |
| TTGCCGAACCGGCACAGATT+GGG | - | chr1.4:24146745-24146764 | None:intergenic | 55.0% | |
| TTTGCCGAACCGGCACAGAT+TGG | - | chr1.4:24146746-24146765 | None:intergenic | 55.0% | |
| ! | CGGATGACAGGTGTGCCATT+AGG | - | chr1.4:24147009-24147028 | None:intergenic | 55.0% |
| ! | GCCTACATTGCTGTTCCAGG+CGG | + | chr1.4:24148423-24148442 | MS.gene88632:CDS | 55.0% |
| !! | AGGGGTGTTACAGGTCGGTT+TGG | + | chr1.4:24147473-24147492 | MS.gene88632:intron | 55.0% |
| !! | CAACCCAATCTGTGCCGGTT+CGG | + | chr1.4:24146739-24146758 | MS.gene88632:intron | 55.0% |
| !! | CTCATTGGTTCGAGCGTGAG+GGG | + | chr1.4:24145717-24145736 | MS.gene88632:intron | 55.0% |
| !! | GCTCATTGGTTCGAGCGTGA+GGG | + | chr1.4:24145716-24145735 | MS.gene88632:intron | 55.0% |
| !! | TCATTGGTTCGAGCGTGAGG+GGG | + | chr1.4:24145718-24145737 | MS.gene88632:intron | 55.0% |
| AGAGCCTGGAGCCCTCTTGT+TGG | + | chr1.4:24145668-24145687 | MS.gene88632:intron | 60.0% | |
| ATGCCCAACAAGAGGGCTCC+AGG | - | chr1.4:24145675-24145694 | None:intergenic | 60.0% | |
| CAAGGAGGGGCTCGACATAC+CGG | + | chr1.4:24149057-24149076 | MS.gene88632:CDS | 60.0% | |
| GAGCCTGGAGCCCTCTTGTT+GGG | + | chr1.4:24145669-24145688 | MS.gene88632:intron | 60.0% | |
| ! | CTATCCAAGGGGTGTGGGTG+TGG | - | chr1.4:24145842-24145861 | None:intergenic | 60.0% |
| !! | CGTAAGGATGTGGTGGACCC+TGG | + | chr1.4:24146861-24146880 | MS.gene88632:intron | 60.0% |
| !! | GGCTCATTGGTTCGAGCGTG+AGG | + | chr1.4:24145715-24145734 | MS.gene88632:intron | 60.0% |
| !!! | GGCCCCTTTTTTGGGACACG+TGG | - | chr1.4:24145111-24145130 | None:intergenic | 60.0% |
| TGAGCCACACCCACACCCCT+TGG | + | chr1.4:24145835-24145854 | MS.gene88632:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 24144695 | 24149113 | 24144695 | ID=MS.gene88632 |
| chr1.4 | mRNA | 24144695 | 24149113 | 24144695 | ID=MS.gene88632.t1;Parent=MS.gene88632 |
| chr1.4 | exon | 24144695 | 24144953 | 24144695 | ID=MS.gene88632.t1.exon1;Parent=MS.gene88632.t1 |
| chr1.4 | CDS | 24144695 | 24144953 | 24144695 | ID=cds.MS.gene88632.t1;Parent=MS.gene88632.t1 |
| chr1.4 | exon | 24146403 | 24146569 | 24146403 | ID=MS.gene88632.t1.exon2;Parent=MS.gene88632.t1 |
| chr1.4 | CDS | 24146403 | 24146569 | 24146403 | ID=cds.MS.gene88632.t1;Parent=MS.gene88632.t1 |
| chr1.4 | exon | 24147358 | 24147456 | 24147358 | ID=MS.gene88632.t1.exon3;Parent=MS.gene88632.t1 |
| chr1.4 | CDS | 24147358 | 24147456 | 24147358 | ID=cds.MS.gene88632.t1;Parent=MS.gene88632.t1 |
| chr1.4 | exon | 24147552 | 24147620 | 24147552 | ID=MS.gene88632.t1.exon4;Parent=MS.gene88632.t1 |
| chr1.4 | CDS | 24147552 | 24147620 | 24147552 | ID=cds.MS.gene88632.t1;Parent=MS.gene88632.t1 |
| chr1.4 | exon | 24147693 | 24147833 | 24147693 | ID=MS.gene88632.t1.exon5;Parent=MS.gene88632.t1 |
| chr1.4 | CDS | 24147693 | 24147833 | 24147693 | ID=cds.MS.gene88632.t1;Parent=MS.gene88632.t1 |
| chr1.4 | exon | 24147908 | 24147997 | 24147908 | ID=MS.gene88632.t1.exon6;Parent=MS.gene88632.t1 |
| chr1.4 | CDS | 24147908 | 24147997 | 24147908 | ID=cds.MS.gene88632.t1;Parent=MS.gene88632.t1 |
| chr1.4 | exon | 24148411 | 24148578 | 24148411 | ID=MS.gene88632.t1.exon7;Parent=MS.gene88632.t1 |
| chr1.4 | CDS | 24148411 | 24148578 | 24148411 | ID=cds.MS.gene88632.t1;Parent=MS.gene88632.t1 |
| chr1.4 | exon | 24148837 | 24148912 | 24148837 | ID=MS.gene88632.t1.exon8;Parent=MS.gene88632.t1 |
| chr1.4 | CDS | 24148837 | 24148912 | 24148837 | ID=cds.MS.gene88632.t1;Parent=MS.gene88632.t1 |
| chr1.4 | exon | 24148986 | 24149113 | 24148986 | ID=MS.gene88632.t1.exon9;Parent=MS.gene88632.t1 |
| chr1.4 | CDS | 24148986 | 24149113 | 24148986 | ID=cds.MS.gene88632.t1;Parent=MS.gene88632.t1 |
| Gene Sequence |
| Protein sequence |
