Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050560.t1 | XP_013450569.2 | 98.1 | 154 | 3 | 0 | 1 | 154 | 113 | 266 | 6.90E-78 | 300.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050560.t1 | A0A396H874 | 98.1 | 154 | 3 | 0 | 1 | 154 | 113 | 266 | 5.0e-78 | 300.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050301 | MS.gene050560 | 0.830071 | 3.61E-55 | -1.69E-46 |
| MS.gene050558 | MS.gene050560 | 0.899659 | 1.59E-77 | -1.69E-46 |
| MS.gene050560 | MS.gene050787 | 0.82409 | 9.74E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene050820 | 0.818401 | 2.00E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene051860 | 0.837456 | 5.14E-57 | -1.69E-46 |
| MS.gene050560 | MS.gene052207 | 0.830428 | 2.95E-55 | -1.69E-46 |
| MS.gene050560 | MS.gene053836 | 0.825776 | 3.90E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene054473 | 0.82067 | 6.07E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene055358 | 0.809179 | 2.15E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene055428 | 0.800225 | 1.59E-48 | -1.69E-46 |
| MS.gene050560 | MS.gene055804 | 0.801882 | 7.30E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene056875 | 0.802292 | 6.01E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene057121 | 0.854437 | 1.23E-61 | -1.69E-46 |
| MS.gene050560 | MS.gene057245 | 0.80987 | 1.53E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene057469 | 0.869748 | 2.45E-66 | -1.69E-46 |
| MS.gene050560 | MS.gene058002 | 0.825766 | 3.92E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene05811 | 0.813339 | 2.69E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene058736 | 0.828037 | 1.12E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene058739 | 0.825114 | 5.59E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene05907 | 0.803 | 4.30E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene059128 | 0.805197 | 1.50E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene05984 | 0.816138 | 6.46E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene060314 | 0.807745 | 4.35E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene061114 | -0.803293 | 3.74E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene061334 | 0.80049 | 1.41E-48 | -1.69E-46 |
| MS.gene050560 | MS.gene063114 | 0.822722 | 2.03E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene06347 | 0.812313 | 4.51E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene064048 | 0.817392 | 3.38E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene06470 | 0.821529 | 3.85E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene066388 | 0.816433 | 5.55E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene06691 | 0.84626 | 2.43E-59 | -1.69E-46 |
| MS.gene050560 | MS.gene067334 | 0.81449 | 1.50E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene067365 | 0.825301 | 5.05E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene067366 | 0.830288 | 3.19E-55 | -1.69E-46 |
| MS.gene050560 | MS.gene067367 | 0.81128 | 7.58E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene067459 | 0.808245 | 3.40E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene068950 | 0.824793 | 6.66E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene06900 | 0.847875 | 8.77E-60 | -1.69E-46 |
| MS.gene050560 | MS.gene069525 | 0.800679 | 1.29E-48 | -1.69E-46 |
| MS.gene050560 | MS.gene070279 | 0.80137 | 9.30E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene071062 | 0.81991 | 9.06E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene07115 | 0.814496 | 1.50E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene071610 | 0.816023 | 6.85E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene071772 | 0.810277 | 1.25E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene072584 | 0.8219 | 3.16E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene072618 | 0.801726 | 7.86E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene073438 | 0.842647 | 2.28E-58 | -1.69E-46 |
| MS.gene050560 | MS.gene07431 | 0.801576 | 8.44E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene07596 | 0.809237 | 2.09E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene09069 | 0.809431 | 1.90E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene09136 | 0.804796 | 1.82E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene09574 | 0.808709 | 2.71E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene20612 | 0.807068 | 6.06E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene20652 | 0.809964 | 1.46E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene21271 | 0.801196 | 1.01E-48 | -1.69E-46 |
| MS.gene050560 | MS.gene22296 | 0.807483 | 4.94E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene22764 | 0.801521 | 8.66E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene23532 | 0.832222 | 1.07E-55 | -1.69E-46 |
| MS.gene050560 | MS.gene24247 | 0.8139 | 2.03E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene24730 | 0.821803 | 3.33E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene25859 | 0.807851 | 4.13E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene25890 | 0.813976 | 1.95E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene27938 | 0.846575 | 1.99E-59 | -1.69E-46 |
| MS.gene050560 | MS.gene28311 | 0.818049 | 2.40E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene28998 | 0.808685 | 2.74E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene31030 | 0.809742 | 1.63E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene31464 | 0.815944 | 7.13E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene32717 | 0.806594 | 7.62E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene32786 | 0.80657 | 7.71E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene33527 | 0.806143 | 9.49E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene34272 | 0.814702 | 1.35E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene34352 | 0.829364 | 5.37E-55 | -1.69E-46 |
| MS.gene050560 | MS.gene35394 | -0.800801 | 1.22E-48 | -1.69E-46 |
| MS.gene050560 | MS.gene35470 | 0.803208 | 3.89E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene36862 | 0.842517 | 2.46E-58 | -1.69E-46 |
| MS.gene050560 | MS.gene36863 | 0.84043 | 8.74E-58 | -1.69E-46 |
| MS.gene050560 | MS.gene37213 | 0.823387 | 1.42E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene37517 | 0.804685 | 1.92E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene38339 | 0.808174 | 3.53E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene39104 | 0.808754 | 2.65E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene39299 | 0.821866 | 3.21E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene39334 | 0.832938 | 7.10E-56 | -1.69E-46 |
| MS.gene050560 | MS.gene39336 | 0.809385 | 1.94E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene39496 | 0.808679 | 2.75E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene40286 | 0.806135 | 9.53E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene40678 | 0.801963 | 7.03E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene41327 | 0.824389 | 8.29E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene42724 | 0.815286 | 9.99E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene43917 | 0.847822 | 9.07E-60 | -1.69E-46 |
| MS.gene050560 | MS.gene43919 | 0.816799 | 4.59E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene43933 | 0.814869 | 1.24E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene43974 | 0.840039 | 1.11E-57 | -1.69E-46 |
| MS.gene050560 | MS.gene44461 | 0.810001 | 1.43E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene44474 | -0.803508 | 3.37E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene45108 | 0.856354 | 3.40E-62 | -1.69E-46 |
| MS.gene050560 | MS.gene47758 | 0.812037 | 5.19E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene48577 | 0.802619 | 5.15E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene49304 | 0.814258 | 1.69E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene50644 | 0.812196 | 4.79E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene50700 | 0.840369 | 9.06E-58 | -1.69E-46 |
| MS.gene050560 | MS.gene51570 | 0.808831 | 2.55E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene52399 | 0.803639 | 3.17E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene55219 | -0.808763 | 2.64E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene55321 | 0.811807 | 5.82E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene56057 | 0.807519 | 4.86E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene57078 | 0.817839 | 2.68E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene57565 | 0.831812 | 1.35E-55 | -1.69E-46 |
| MS.gene050560 | MS.gene57566 | 0.839379 | 1.64E-57 | -1.69E-46 |
| MS.gene050560 | MS.gene57643 | 0.813722 | 2.22E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene57945 | 0.832356 | 9.90E-56 | -1.69E-46 |
| MS.gene050560 | MS.gene58480 | 0.81991 | 9.06E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene59135 | 0.806845 | 6.75E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene59903 | 0.829932 | 3.90E-55 | -1.69E-46 |
| MS.gene050560 | MS.gene61139 | 0.804015 | 2.65E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene61507 | 0.807535 | 4.82E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene61670 | 0.832613 | 8.55E-56 | -1.69E-46 |
| MS.gene050560 | MS.gene62602 | 0.802687 | 4.98E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene63009 | 0.802385 | 5.75E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene63288 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene63507 | 0.833715 | 4.55E-56 | -1.69E-46 |
| MS.gene050560 | MS.gene63820 | 0.804115 | 2.52E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene64533 | 0.803409 | 3.53E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene64621 | 0.827703 | 1.35E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene65665 | 0.834933 | 2.25E-56 | -1.69E-46 |
| MS.gene050560 | MS.gene66157 | 0.800628 | 1.32E-48 | -1.69E-46 |
| MS.gene050560 | MS.gene66332 | 0.803823 | 2.90E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene66847 | 0.825459 | 4.63E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene67226 | 0.842661 | 2.26E-58 | -1.69E-46 |
| MS.gene050560 | MS.gene68168 | 0.808544 | 2.94E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene68315 | 0.810387 | 1.18E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene68764 | 0.820456 | 6.79E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene69001 | 0.836524 | 8.90E-57 | -1.69E-46 |
| MS.gene050560 | MS.gene69014 | 0.801313 | 9.55E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene69420 | 0.802804 | 4.72E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene70566 | 0.803609 | 3.21E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene70897 | 0.814027 | 1.90E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene70899 | 0.800537 | 1.38E-48 | -1.69E-46 |
| MS.gene050560 | MS.gene71456 | 0.840119 | 1.05E-57 | -1.69E-46 |
| MS.gene050560 | MS.gene71489 | 0.804429 | 2.17E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene72396 | 0.800022 | 1.75E-48 | -1.69E-46 |
| MS.gene050560 | MS.gene73745 | 0.805061 | 1.60E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene74599 | 0.809394 | 1.93E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene74889 | 0.829079 | 6.29E-55 | -1.69E-46 |
| MS.gene050560 | MS.gene75475 | 0.832632 | 8.46E-56 | -1.69E-46 |
| MS.gene050560 | MS.gene75906 | 0.830003 | 3.75E-55 | -1.69E-46 |
| MS.gene050560 | MS.gene76554 | 0.834266 | 3.31E-56 | -1.69E-46 |
| MS.gene050560 | MS.gene79179 | 0.801466 | 8.89E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene79217 | 0.807225 | 5.61E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene79290 | 0.818263 | 2.15E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene81435 | 0.80529 | 1.43E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene81436 | 0.814299 | 1.65E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene82533 | 0.803415 | 3.53E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene82572 | 0.849473 | 3.16E-60 | -1.69E-46 |
| MS.gene050560 | MS.gene82769 | 0.811687 | 6.18E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene82797 | 0.833131 | 6.36E-56 | -1.69E-46 |
| MS.gene050560 | MS.gene83582 | 0.822669 | 2.09E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene85947 | 0.823916 | 1.07E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene86055 | 0.854457 | 1.22E-61 | -1.69E-46 |
| MS.gene050560 | MS.gene86985 | 0.829162 | 6.01E-55 | -1.69E-46 |
| MS.gene050560 | MS.gene88632 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene89017 | 0.812728 | 3.66E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene89630 | 0.807186 | 5.72E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene90298 | 0.80448 | 2.12E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene90444 | 0.813059 | 3.10E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene91150 | 0.829872 | 4.04E-55 | -1.69E-46 |
| MS.gene050560 | MS.gene91645 | 0.853831 | 1.84E-61 | -1.69E-46 |
| MS.gene050560 | MS.gene91807 | 0.805487 | 1.30E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene92318 | 0.812948 | 3.28E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene93385 | 0.818768 | 1.65E-52 | -1.69E-46 |
| MS.gene050560 | MS.gene93892 | 0.822946 | 1.80E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene94499 | 0.825621 | 4.24E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene94661 | 0.807828 | 4.18E-50 | -1.69E-46 |
| MS.gene050560 | MS.gene96276 | 0.833784 | 4.37E-56 | -1.69E-46 |
| MS.gene050560 | MS.gene97706 | 0.803517 | 3.36E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene99622 | 0.801449 | 8.96E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene99675 | 0.814036 | 1.89E-51 | -1.69E-46 |
| MS.gene050560 | MS.gene99802 | 0.804286 | 2.32E-49 | -1.69E-46 |
| MS.gene050560 | MS.gene99854 | 0.820296 | 7.39E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050560.t1 | MTR_7g115670 | 98.693 | 153 | 2 | 0 | 1 | 153 | 113 | 265 | 5.32e-109 | 312 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050560.t1 | AT1G08640 | 71.242 | 153 | 44 | 0 | 2 | 154 | 123 | 275 | 2.07e-76 | 230 |
Find 31 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCCTTTGCTTTCGTTTAT+AGG | 0.144704 | 7.4:-2060167 | MS.gene050560:CDS |
| CTTGGTCCCCAAGGTATAAT+TGG | 0.268204 | 7.4:+2060845 | None:intergenic |
| ACTGCTCCGGTCGCTGGCCT+TGG | 0.308462 | 7.4:-2059931 | MS.gene050560:CDS |
| TCAGTTGAGTAATCGGAAAA+AGG | 0.325391 | 7.4:-2061455 | MS.gene050560:CDS |
| TGATGGCTCAGTTGAGTAAT+CGG | 0.411340 | 7.4:-2061462 | MS.gene050560:CDS |
| ATGTATAGCTGTTTCATCCT+TGG | 0.412262 | 7.4:-2059901 | MS.gene050560:intron |
| AAAGAGACTGCTCCGGTCGC+TGG | 0.428177 | 7.4:-2059937 | MS.gene050560:CDS |
| CCCATACGCAGTCCTTCTCC+TGG | 0.433111 | 7.4:+2059960 | None:intergenic |
| CAAACAGCCAATTATACCTT+GGG | 0.467405 | 7.4:-2060852 | MS.gene050560:CDS |
| CAGGAAGATGGTGAAGATCC+AGG | 0.474884 | 7.4:-2059978 | MS.gene050560:CDS |
| ATCTCTTCTTTACAACAGTC+AGG | 0.475809 | 7.4:-2058993 | MS.gene050560:intron |
| TCCAGGAGAAGGACTGCGTA+TGG | 0.496377 | 7.4:-2059961 | MS.gene050560:CDS |
| TTGTCTTTCTGCAGACAGCT+TGG | 0.506000 | 7.4:-2060233 | MS.gene050560:intron |
| TGTTGACGATGTAAAATTGA+AGG | 0.511272 | 7.4:-2058150 | MS.gene050560:CDS |
| TGACTGTTGTAAAGAAGAGA+TGG | 0.528342 | 7.4:+2058995 | None:intergenic |
| AAATTGAATGCAGGTTTCAA+AGG | 0.532979 | 7.4:-2060891 | MS.gene050560:intron |
| TATGAAACTCACATTAATTG+TGG | 0.549027 | 7.4:+2060104 | None:intergenic |
| CAATTATACCTTGGGGACCA+AGG | 0.553731 | 7.4:-2060844 | MS.gene050560:intron |
| ACAAACAGCCAATTATACCT+TGG | 0.553845 | 7.4:-2060853 | MS.gene050560:CDS |
| AACATAGTTGAGTCTGCAAG+TGG | 0.554259 | 7.4:-2059025 | MS.gene050560:CDS |
| AAATGATGTGCGCATCAACT+TGG | 0.557136 | 7.4:-2060334 | MS.gene050560:CDS |
| GATCAATATGATGCGGTGAT+CGG | 0.559806 | 7.4:-2058128 | MS.gene050560:CDS |
| CCAGGAGAAGGACTGCGTAT+GGG | 0.593890 | 7.4:-2059960 | MS.gene050560:CDS |
| GTATGGGAAAGAGACTGCTC+CGG | 0.601329 | 7.4:-2059944 | MS.gene050560:CDS |
| GACTGTTGTAAAGAAGAGAT+GGG | 0.602985 | 7.4:+2058996 | None:intergenic |
| GATGGTGAAGATCCAGGAGA+AGG | 0.603751 | 7.4:-2059972 | MS.gene050560:CDS |
| ATAACAAACCTTGGTCCCCA+AGG | 0.616918 | 7.4:+2060836 | None:intergenic |
| AAGCCTATAAACGAAAGCAA+AGG | 0.649140 | 7.4:+2060164 | None:intergenic |
| TAATGTTGGATACAGGAAGA+TGG | 0.650849 | 7.4:-2059990 | MS.gene050560:intron |
| ATTGAAGGATCAATATGATG+CGG | 0.666809 | 7.4:-2058135 | MS.gene050560:CDS |
| AAACAGCCAATTATACCTTG+GGG | 0.721557 | 7.4:-2060851 | MS.gene050560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAATTTAATATTGCAA+AGG | + | chr7.4:2061233-2061252 | None:intergenic | 15.0% |
| !! | ATTTAAATACAAATTACTCA+TGG | + | chr7.4:2058990-2059009 | None:intergenic | 15.0% |
| !! | TTTGCAATATTAAATTTCAT+TGG | - | chr7.4:2061232-2061251 | MS.gene050560:intron | 15.0% |
| !!! | AATTTTAAAGAAGAAATTTG+TGG | - | chr7.4:2060172-2060191 | MS.gene050560:CDS | 15.0% |
| !!! | AATTTTCATTTAATCTTTGT+TGG | - | chr7.4:2060131-2060150 | MS.gene050560:CDS | 15.0% |
| !! | AAGCAAATAAACAAAATGTT+AGG | + | chr7.4:2058642-2058661 | None:intergenic | 20.0% |
| !! | AGAAACTATTAATCTTTATC+TGG | + | chr7.4:2060495-2060514 | None:intergenic | 20.0% |
| !! | AGATAAAGATTAATAGTTTC+TGG | - | chr7.4:2060494-2060513 | MS.gene050560:intron | 20.0% |
| !! | AGCAAATAAACAAAATGTTA+GGG | + | chr7.4:2058641-2058660 | None:intergenic | 20.0% |
| !! | ATAAGAAAATAGAAAACTTC+AGG | + | chr7.4:2060436-2060455 | None:intergenic | 20.0% |
| !! | ATAATGATTAATCGTATTCT+TGG | + | chr7.4:2058491-2058510 | None:intergenic | 20.0% |
| !! | ATATACACATTAAGAAACAT+TGG | + | chr7.4:2061110-2061129 | None:intergenic | 20.0% |
| !! | CAAATTGCAATATATAGAAA+AGG | + | chr7.4:2061197-2061216 | None:intergenic | 20.0% |
| !! | GTAATCTACAATAATTAACA+AGG | - | chr7.4:2059768-2059787 | MS.gene050560:intron | 20.0% |
| !! | TAATTCAACATGGTTAAAAA+TGG | + | chr7.4:2059534-2059553 | None:intergenic | 20.0% |
| !! | TGTCATGATGAAAAATAATT+TGG | + | chr7.4:2060089-2060108 | None:intergenic | 20.0% |
| !! | TTAATTATTGTAGATTACAG+AGG | + | chr7.4:2059766-2059785 | None:intergenic | 20.0% |
| !!! | AATTTTGTATACGAAGAATT+TGG | - | chr7.4:2058405-2058424 | MS.gene050560:intron | 20.0% |
| !!! | AGTATTACTTTTTTAACACA+TGG | - | chr7.4:2060840-2060859 | MS.gene050560:intron | 20.0% |
| !!! | AGTTTGATTTCACTAATATA+TGG | + | chr7.4:2061331-2061350 | None:intergenic | 20.0% |
| !!! | ATATTTTCTAAATTGAATGC+AGG | - | chr7.4:2058675-2058694 | MS.gene050560:intron | 20.0% |
| !!! | ATTCTAAGATTGTATTGAAT+AGG | + | chr7.4:2059508-2059527 | None:intergenic | 20.0% |
| !!! | ATTCTATTGATAATTCAACA+TGG | + | chr7.4:2059544-2059563 | None:intergenic | 20.0% |
| !!! | ATTTATTTTCATCTACAGTT+TGG | - | chr7.4:2059012-2059031 | MS.gene050560:CDS | 20.0% |
| !!! | ATTTTGTATACGAAGAATTT+GGG | - | chr7.4:2058406-2058425 | MS.gene050560:intron | 20.0% |
| !!! | TGTCTTTTTAAAGAAAAAGA+TGG | - | chr7.4:2059823-2059842 | MS.gene050560:intron | 20.0% |
| ! | AAAATGTTAGGGTGAAATAT+TGG | + | chr7.4:2058630-2058649 | None:intergenic | 25.0% |
| ! | AAATGTTAGGGTGAAATATT+GGG | + | chr7.4:2058629-2058648 | None:intergenic | 25.0% |
| ! | AGCAGTAATAAAAGAGTAAT+TGG | + | chr7.4:2058926-2058945 | None:intergenic | 25.0% |
| ! | ATAATGTCAAAAAATCCAAG+TGG | + | chr7.4:2059181-2059200 | None:intergenic | 25.0% |
| ! | ATGGCATGTTTAATTCATAA+GGG | + | chr7.4:2058971-2058990 | None:intergenic | 25.0% |
| ! | ATGGTTGAATTGTGTTAATT+AGG | - | chr7.4:2058877-2058896 | MS.gene050560:intron | 25.0% |
| ! | TATGAAACTCACATTAATTG+TGG | + | chr7.4:2059474-2059493 | None:intergenic | 25.0% |
| ! | TCCTTAAAATGACATTAACT+CGG | + | chr7.4:2061396-2061415 | None:intergenic | 25.0% |
| ! | TCTTCGTATACAAAATTGAT+AGG | + | chr7.4:2058402-2058421 | None:intergenic | 25.0% |
| ! | TGGGGGAATTAATTTATTTA+AGG | + | chr7.4:2058566-2058585 | None:intergenic | 25.0% |
| ! | TGTCAAAATATCATTTCTCT+GGG | - | chr7.4:2060057-2060076 | MS.gene050560:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr7.4:2059953-2059972 | MS.gene050560:CDS | 25.0% |
| ! | TTGTCAAAATATCATTTCTC+TGG | - | chr7.4:2060056-2060075 | MS.gene050560:intron | 25.0% |
| ! | TTTAAAGAAGAAATTTGTGG+CGG | - | chr7.4:2060175-2060194 | MS.gene050560:CDS | 25.0% |
| !! | AAAAATTGATTTAGCCAAGA+AGG | + | chr7.4:2060624-2060643 | None:intergenic | 25.0% |
| !! | AAAAGTATGGCACATTTAAA+TGG | + | chr7.4:2060881-2060900 | None:intergenic | 25.0% |
| !! | TGTATTTTTCTTAGGAATTC+TGG | - | chr7.4:2060681-2060700 | MS.gene050560:intron | 25.0% |
| !! | TTCATGAATCATGATAATGT+TGG | - | chr7.4:2059571-2059590 | MS.gene050560:intron | 25.0% |
| !! | TTCTTTTGCATTCTTTATGT+GGG | - | chr7.4:2060716-2060735 | MS.gene050560:intron | 25.0% |
| !! | TTTCTTTTGCATTCTTTATG+TGG | - | chr7.4:2060715-2060734 | MS.gene050560:intron | 25.0% |
| !! | TTTTGTGAGTAGTAAATGAA+CGG | - | chr7.4:2059277-2059296 | MS.gene050560:intron | 25.0% |
| !!! | AAGATTGATTTTAAAAGCAC+AGG | - | chr7.4:2061150-2061169 | MS.gene050560:intron | 25.0% |
| !!! | AGATACTTCTTAGTTTGTTT+TGG | - | chr7.4:2058239-2058258 | MS.gene050560:intron | 25.0% |
| !!! | ATTGTTTTTGACCAATAAGA+AGG | + | chr7.4:2059954-2059973 | None:intergenic | 25.0% |
| !!! | CATTGTAATGAAAAGTGTTA+AGG | + | chr7.4:2058459-2058478 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGACCAATAAGAA+GGG | + | chr7.4:2059953-2059972 | None:intergenic | 25.0% |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr7.4:2059966-2059985 | MS.gene050560:CDS | 30.0% | |
| AAATTGAATGCAGGTTTCAA+AGG | - | chr7.4:2058684-2058703 | MS.gene050560:intron | 30.0% | |
| AACATGATGAAATTTGACAG+TGG | + | chr7.4:2059096-2059115 | None:intergenic | 30.0% | |
| AATAAGAAGGGAGAAAAACA+AGG | + | chr7.4:2059941-2059960 | None:intergenic | 30.0% | |
| AATATAGCATAGATGATGTG+GGG | + | chr7.4:2058584-2058603 | None:intergenic | 30.0% | |
| AATGTCGCATATATCTTAAG+AGG | + | chr7.4:2061297-2061316 | None:intergenic | 30.0% | |
| AATGTTAGGGTGAAATATTG+GGG | + | chr7.4:2058628-2058647 | None:intergenic | 30.0% | |
| ACAATATAGCATAGATGATG+TGG | + | chr7.4:2058586-2058605 | None:intergenic | 30.0% | |
| ACTCTTCCACTAAAGTAAAA+CGG | + | chr7.4:2059876-2059895 | None:intergenic | 30.0% | |
| AGTAATGAATTGTCAGATAG+TGG | - | chr7.4:2060997-2061016 | MS.gene050560:intron | 30.0% | |
| ATTACTAAATCGCGGAAATA+TGG | + | chr7.4:2060983-2061002 | None:intergenic | 30.0% | |
| ATTGAAGGATCAATATGATG+CGG | - | chr7.4:2061440-2061459 | MS.gene050560:CDS | 30.0% | |
| CAATATAGCATAGATGATGT+GGG | + | chr7.4:2058585-2058604 | None:intergenic | 30.0% | |
| CAATTCAACCATAAAGTTTG+TGG | + | chr7.4:2058869-2058888 | None:intergenic | 30.0% | |
| CACATTAAGAAACATTGGAT+TGG | + | chr7.4:2061105-2061124 | None:intergenic | 30.0% | |
| CATGGATCATATTATTCACA+TGG | + | chr7.4:2060653-2060672 | None:intergenic | 30.0% | |
| CATGGCATGTTTAATTCATA+AGG | + | chr7.4:2058972-2058991 | None:intergenic | 30.0% | |
| GACAATTCATTACTAAATCG+CGG | + | chr7.4:2060991-2061010 | None:intergenic | 30.0% | |
| GTGAGTTTCATATTCTATGA+CGG | - | chr7.4:2059482-2059501 | MS.gene050560:intron | 30.0% | |
| TAAATCAATTCAGTCCTTCT+TGG | - | chr7.4:2060607-2060626 | MS.gene050560:intron | 30.0% | |
| TCAACAAAGCTGTCATTAAA+TGG | + | chr7.4:2059915-2059934 | None:intergenic | 30.0% | |
| TGTTGACGATGTAAAATTGA+AGG | - | chr7.4:2061425-2061444 | MS.gene050560:intron | 30.0% | |
| TTGATGTGTTATGCATTCAT+TGG | - | chr7.4:2058297-2058316 | MS.gene050560:intron | 30.0% | |
| ! | AACCACTTTATGACAACTTT+TGG | + | chr7.4:2060038-2060057 | None:intergenic | 30.0% |
| ! | AATTATTGCTGCTTCATCAA+AGG | + | chr7.4:2058327-2058346 | None:intergenic | 30.0% |
| ! | ACATTAATTGTGGAGCTTTT+CGG | + | chr7.4:2059464-2059483 | None:intergenic | 30.0% |
| ! | ATCATGATAATGTTGGATAC+AGG | - | chr7.4:2059578-2059597 | MS.gene050560:intron | 30.0% |
| ! | ATTTTCATCTACAGTTTGGT+AGG | - | chr7.4:2059016-2059035 | MS.gene050560:CDS | 30.0% |
| ! | GTTTTGTGTGCAATTTCAAA+TGG | + | chr7.4:2058199-2058218 | None:intergenic | 30.0% |
| ! | TGATGATTCATCTGATCTTT+TGG | - | chr7.4:2059699-2059718 | MS.gene050560:intron | 30.0% |
| ! | TGGATCATTTAAGGTAAAGT+AGG | - | chr7.4:2058153-2058172 | MS.gene050560:CDS | 30.0% |
| ! | TGTGACTTTTGGATCATTTA+AGG | - | chr7.4:2058144-2058163 | MS.gene050560:CDS | 30.0% |
| !! | TTGTTTTTCTCCCTTCTTAT+TGG | - | chr7.4:2059940-2059959 | MS.gene050560:CDS | 30.0% |
| !!! | ACCGAGTTAATGTCATTTTA+AGG | - | chr7.4:2061392-2061411 | MS.gene050560:intron | 30.0% |
| !!! | TTTCTGGTACATTTTTTTGC+AGG | - | chr7.4:2060510-2060529 | MS.gene050560:intron | 30.0% |
| AAACAGCCAATTATACCTTG+GGG | - | chr7.4:2058724-2058743 | MS.gene050560:intron | 35.0% | |
| AAGCAATAACATGCCAAGTT+TGG | + | chr7.4:2060258-2060277 | None:intergenic | 35.0% | |
| AAGCCTATAAACGAAAGCAA+AGG | + | chr7.4:2059414-2059433 | None:intergenic | 35.0% | |
| ACAAACAGCCAATTATACCT+TGG | - | chr7.4:2058722-2058741 | MS.gene050560:intron | 35.0% | |
| AGCTATACATCCAAAAACCA+AGG | + | chr7.4:2059664-2059683 | None:intergenic | 35.0% | |
| AGTCAAATAGCAGCTATAGT+GGG | - | chr7.4:2060927-2060946 | MS.gene050560:intron | 35.0% | |
| ATATAGCATAGATGATGTGG+GGG | + | chr7.4:2058583-2058602 | None:intergenic | 35.0% | |
| ATCTCTTCTTTACAACAGTC+AGG | - | chr7.4:2060582-2060601 | MS.gene050560:intron | 35.0% | |
| ATGTTAGGGTGAAATATTGG+GGG | + | chr7.4:2058627-2058646 | None:intergenic | 35.0% | |
| CAAAATATCATTTCTCTGGG+TGG | - | chr7.4:2060060-2060079 | MS.gene050560:intron | 35.0% | |
| CAAACAGCCAATTATACCTT+GGG | - | chr7.4:2058723-2058742 | MS.gene050560:intron | 35.0% | |
| CAACCGTAGAGTAATCTTAT+TGG | - | chr7.4:2061270-2061289 | MS.gene050560:intron | 35.0% | |
| CAATCGCAGATTGCAAAAAA+TGG | + | chr7.4:2061071-2061090 | None:intergenic | 35.0% | |
| CACAAAACATGAAGACATGA+CGG | - | chr7.4:2058211-2058230 | MS.gene050560:intron | 35.0% | |
| CACAATTCAAAACTGTGTCT+TGG | - | chr7.4:2060810-2060829 | MS.gene050560:intron | 35.0% | |
| CAGTTGAGTAATCGGAAAAA+GGG | - | chr7.4:2058121-2058140 | MS.gene050560:CDS | 35.0% | |
| CCAAAAGTCCACAAACTTTA+TGG | - | chr7.4:2058858-2058877 | MS.gene050560:intron | 35.0% | |
| CTCTTCCACTAAAGTAAAAC+GGG | + | chr7.4:2059875-2059894 | None:intergenic | 35.0% | |
| GACTGTTGTAAAGAAGAGAT+GGG | + | chr7.4:2060582-2060601 | None:intergenic | 35.0% | |
| GATGAAATTTGACAGTGGAA+AGG | + | chr7.4:2059091-2059110 | None:intergenic | 35.0% | |
| GGACCAATAAGATTACTCTA+CGG | + | chr7.4:2061276-2061295 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCATAAAG+TGG | - | chr7.4:2060033-2060052 | MS.gene050560:intron | 35.0% | |
| TAATGTTGGATACAGGAAGA+TGG | - | chr7.4:2059585-2059604 | MS.gene050560:intron | 35.0% | |
| TAGCCTTTGCTTTCGTTTAT+AGG | - | chr7.4:2059408-2059427 | MS.gene050560:intron | 35.0% | |
| TAGGACAACGAGGATTAAAA+TGG | + | chr7.4:2060757-2060776 | None:intergenic | 35.0% | |
| TAGTCAAATAGCAGCTATAG+TGG | - | chr7.4:2060926-2060945 | MS.gene050560:intron | 35.0% | |
| TCAGATGAATCATCATACCA+AGG | + | chr7.4:2059694-2059713 | None:intergenic | 35.0% | |
| TCAGTTGAGTAATCGGAAAA+AGG | - | chr7.4:2058120-2058139 | MS.gene050560:CDS | 35.0% | |
| TCCTAAGAAAAATACACTGC+AGG | + | chr7.4:2060677-2060696 | None:intergenic | 35.0% | |
| TCTCTGATATCCCAGTTTAT+GGG | - | chr7.4:2059740-2059759 | MS.gene050560:intron | 35.0% | |
| TGACAAGCAATAACAAACCT+TGG | + | chr7.4:2058751-2058770 | None:intergenic | 35.0% | |
| TGACTGTTGTAAAGAAGAGA+TGG | + | chr7.4:2060583-2060602 | None:intergenic | 35.0% | |
| TTAACACATGGAAAGCTGTT+TGG | - | chr7.4:2060852-2060871 | MS.gene050560:CDS | 35.0% | |
| TTCTCTGATATCCCAGTTTA+TGG | - | chr7.4:2059739-2059758 | MS.gene050560:intron | 35.0% | |
| TTGTACTTCGATGCAATTTC+AGG | - | chr7.4:2059201-2059220 | MS.gene050560:intron | 35.0% | |
| TTGTATACGAAGAATTTGGG+AGG | - | chr7.4:2058409-2058428 | MS.gene050560:intron | 35.0% | |
| ! | AAAGTTTGTGGACTTTTGGA+GGG | + | chr7.4:2058857-2058876 | None:intergenic | 35.0% |
| ! | ACTTGGCATGTTATTGCTTT+TGG | - | chr7.4:2060259-2060278 | MS.gene050560:intron | 35.0% |
| ! | ATGTATAGCTGTTTCATCCT+TGG | - | chr7.4:2059674-2059693 | MS.gene050560:intron | 35.0% |
| ! | ATTAGACTTTTGTACTGTGC+TGG | - | chr7.4:2060211-2060230 | MS.gene050560:CDS | 35.0% |
| ! | CCATAAAGTTTGTGGACTTT+TGG | + | chr7.4:2058861-2058880 | None:intergenic | 35.0% |
| ! | GACATTAACTCGGTTTTTGA+AGG | + | chr7.4:2061386-2061405 | None:intergenic | 35.0% |
| ! | TAAAGTTTGTGGACTTTTGG+AGG | + | chr7.4:2058858-2058877 | None:intergenic | 35.0% |
| ! | TCCTGCAGTGTATTTTTCTT+AGG | - | chr7.4:2060673-2060692 | MS.gene050560:intron | 35.0% |
| !! | CTTGGCATGTTATTGCTTTT+GGG | - | chr7.4:2060260-2060279 | MS.gene050560:intron | 35.0% |
| !!! | TGACATGTTAGTTTTGTTGC+TGG | - | chr7.4:2058778-2058797 | MS.gene050560:intron | 35.0% |
| AAATGATGTGCGCATCAACT+TGG | - | chr7.4:2059241-2059260 | MS.gene050560:intron | 40.0% | |
| AACATAGTTGAGTCTGCAAG+TGG | - | chr7.4:2060550-2060569 | MS.gene050560:intron | 40.0% | |
| ACTAAATCGCGGAAATATGG+CGG | + | chr7.4:2060980-2060999 | None:intergenic | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr7.4:2059976-2059995 | MS.gene050560:CDS | 40.0% | |
| ATTACAGAGGCCCATAAACT+GGG | + | chr7.4:2059753-2059772 | None:intergenic | 40.0% | |
| ATTGCAAAGGACACATTGAC+AGG | + | chr7.4:2061220-2061239 | None:intergenic | 40.0% | |
| CCAAGTGGCTGATAATAGAA+TGG | + | chr7.4:2059166-2059185 | None:intergenic | 40.0% | |
| CCACTAAAGTAAAACGGGAA+AGG | + | chr7.4:2059870-2059889 | None:intergenic | 40.0% | |
| CCATTCTATTATCAGCCACT+TGG | - | chr7.4:2059163-2059182 | MS.gene050560:intron | 40.0% | |
| GAAAAATACACTGCAGGACA+TGG | + | chr7.4:2060671-2060690 | None:intergenic | 40.0% | |
| GATCAATATGATGCGGTGAT+CGG | - | chr7.4:2061447-2061466 | MS.gene050560:CDS | 40.0% | |
| GCAAAAAATGGCAGTTGACA+AGG | + | chr7.4:2061059-2061078 | None:intergenic | 40.0% | |
| GCAAAGGCTAAAAACTGCAA+AGG | + | chr7.4:2059398-2059417 | None:intergenic | 40.0% | |
| GCTATCCTAGTGCAAAAGTA+TGG | + | chr7.4:2060894-2060913 | None:intergenic | 40.0% | |
| GTGAAATATTGGGGGGATAT+AGG | + | chr7.4:2058619-2058638 | None:intergenic | 40.0% | |
| GTGTGCAATTTCAAATGGAC+AGG | + | chr7.4:2058194-2058213 | None:intergenic | 40.0% | |
| TGTTAGGGTGAAATATTGGG+GGG | + | chr7.4:2058626-2058645 | None:intergenic | 40.0% | |
| TTAATCCTCGTTGTCCTATG+CGG | - | chr7.4:2060759-2060778 | MS.gene050560:intron | 40.0% | |
| ! | ATGTGCCATACTTTTGCACT+AGG | - | chr7.4:2060886-2060905 | MS.gene050560:intron | 40.0% |
| ! | CCTTTCCCGTTTTACTTTAG+TGG | - | chr7.4:2059867-2059886 | MS.gene050560:intron | 40.0% |
| !! | AAGTTTGTGGACTTTTGGAG+GGG | + | chr7.4:2058856-2058875 | None:intergenic | 40.0% |
| !! | TTTTGGAGGGGGAAATAACA+TGG | + | chr7.4:2058844-2058863 | None:intergenic | 40.0% |
| AAAGCACAGGCACTAACTAC+AGG | - | chr7.4:2061163-2061182 | MS.gene050560:intron | 45.0% | |
| ATAACAAACCTTGGTCCCCA+AGG | + | chr7.4:2058742-2058761 | None:intergenic | 45.0% | |
| CAATTATACCTTGGGGACCA+AGG | - | chr7.4:2058731-2058750 | MS.gene050560:intron | 45.0% | |
| CTTGGTCCCCAAGGTATAAT+TGG | + | chr7.4:2058733-2058752 | None:intergenic | 45.0% | |
| GATTACAGAGGCCCATAAAC+TGG | + | chr7.4:2059754-2059773 | None:intergenic | 45.0% | |
| GCTATAACACTGTAGCGTAG+TGG | - | chr7.4:2061030-2061049 | MS.gene050560:intron | 45.0% | |
| TAATCCTCGTTGTCCTATGC+GGG | - | chr7.4:2060760-2060779 | MS.gene050560:intron | 45.0% | |
| TGGGATTGTAGGACCAAACT+TGG | - | chr7.4:2060242-2060261 | MS.gene050560:intron | 45.0% | |
| TTGTCTTTCTGCAGACAGCT+TGG | - | chr7.4:2059342-2059361 | MS.gene050560:intron | 45.0% | |
| ! | GGAGCTTTTCGGAGATTCAA+AGG | + | chr7.4:2059453-2059472 | None:intergenic | 45.0% |
| !! | AGTTTGTGGACTTTTGGAGG+GGG | + | chr7.4:2058855-2058874 | None:intergenic | 45.0% |
| !! | CGGAAAAAGGGTGTGACTTT+TGG | - | chr7.4:2058133-2058152 | MS.gene050560:CDS | 45.0% |
| !!! | TTGATTTTATTTAATTATTT+TGG | - | chr7.4:2059300-2059319 | MS.gene050560:intron | 5.0% |
| AATCCTCGTTGTCCTATGCG+GGG | - | chr7.4:2060761-2060780 | MS.gene050560:intron | 50.0% | |
| ATCTCAACTCTTCCCCGCAT+AGG | + | chr7.4:2060776-2060795 | None:intergenic | 50.0% | |
| CAGGAAGATGGTGAAGATCC+AGG | - | chr7.4:2059597-2059616 | MS.gene050560:intron | 50.0% | |
| GATGGTGAAGATCCAGGAGA+AGG | - | chr7.4:2059603-2059622 | MS.gene050560:intron | 50.0% | |
| GTATGGGAAAGAGACTGCTC+CGG | - | chr7.4:2059631-2059650 | MS.gene050560:intron | 50.0% | |
| GTTTGGTCCTACAATCCCAG+TGG | + | chr7.4:2060241-2060260 | None:intergenic | 50.0% | |
| TACTGTGCTGGACTTCCACT+GGG | - | chr7.4:2060223-2060242 | MS.gene050560:intron | 50.0% | |
| TGGACTTCCACTGGGATTGT+AGG | - | chr7.4:2060231-2060250 | MS.gene050560:intron | 50.0% | |
| CAAAAACCAAGGCCAGCGAC+CGG | + | chr7.4:2059653-2059672 | None:intergenic | 55.0% | |
| CCAGGAGAAGGACTGCGTAT+GGG | - | chr7.4:2059615-2059634 | MS.gene050560:intron | 55.0% | |
| GTACTGTGCTGGACTTCCAC+TGG | - | chr7.4:2060222-2060241 | MS.gene050560:CDS | 55.0% | |
| TCCAGGAGAAGGACTGCGTA+TGG | - | chr7.4:2059614-2059633 | MS.gene050560:intron | 55.0% | |
| AAAGAGACTGCTCCGGTCGC+TGG | - | chr7.4:2059638-2059657 | MS.gene050560:intron | 60.0% | |
| CCCATACGCAGTCCTTCTCC+TGG | + | chr7.4:2059618-2059637 | None:intergenic | 60.0% | |
| CTTCCCCGCATAGGACAACG+AGG | + | chr7.4:2060767-2060786 | None:intergenic | 60.0% | |
| !!! | CGGTCGCTGGCCTTGGTTTT+TGG | - | chr7.4:2059651-2059670 | MS.gene050560:intron | 60.0% |
| ! | ACTGCTCCGGTCGCTGGCCT+TGG | - | chr7.4:2059644-2059663 | MS.gene050560:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 2058115 | 2061482 | 2058115 | ID=MS.gene050560 |
| chr7.4 | mRNA | 2058115 | 2061482 | 2058115 | ID=MS.gene050560.t1;Parent=MS.gene050560 |
| chr7.4 | exon | 2061432 | 2061482 | 2061432 | ID=MS.gene050560.t1.exon1;Parent=MS.gene050560.t1 |
| chr7.4 | CDS | 2061432 | 2061482 | 2061432 | ID=cds.MS.gene050560.t1;Parent=MS.gene050560.t1 |
| chr7.4 | exon | 2060845 | 2060900 | 2060845 | ID=MS.gene050560.t1.exon2;Parent=MS.gene050560.t1 |
| chr7.4 | CDS | 2060845 | 2060900 | 2060845 | ID=cds.MS.gene050560.t1;Parent=MS.gene050560.t1 |
| chr7.4 | exon | 2060317 | 2060374 | 2060317 | ID=MS.gene050560.t1.exon3;Parent=MS.gene050560.t1 |
| chr7.4 | CDS | 2060317 | 2060374 | 2060317 | ID=cds.MS.gene050560.t1;Parent=MS.gene050560.t1 |
| chr7.4 | exon | 2060116 | 2060241 | 2060116 | ID=MS.gene050560.t1.exon4;Parent=MS.gene050560.t1 |
| chr7.4 | CDS | 2060116 | 2060241 | 2060116 | ID=cds.MS.gene050560.t1;Parent=MS.gene050560.t1 |
| chr7.4 | exon | 2059902 | 2059997 | 2059902 | ID=MS.gene050560.t1.exon5;Parent=MS.gene050560.t1 |
| chr7.4 | CDS | 2059902 | 2059997 | 2059902 | ID=cds.MS.gene050560.t1;Parent=MS.gene050560.t1 |
| chr7.4 | exon | 2058994 | 2059065 | 2058994 | ID=MS.gene050560.t1.exon6;Parent=MS.gene050560.t1 |
| chr7.4 | CDS | 2058994 | 2059065 | 2058994 | ID=cds.MS.gene050560.t1;Parent=MS.gene050560.t1 |
| chr7.4 | exon | 2058115 | 2058183 | 2058115 | ID=MS.gene050560.t1.exon7;Parent=MS.gene050560.t1 |
| chr7.4 | CDS | 2058115 | 2058183 | 2058115 | ID=cds.MS.gene050560.t1;Parent=MS.gene050560.t1 |
| Gene Sequence |
| Protein sequence |
