AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89606


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89606.t1 MTR_8g076880 97.117 555 15 1 1 554 1 555 0.0 1129
MS.gene89606.t1 MTR_3g117090 58.380 531 189 9 25 542 44 555 0.0 602
MS.gene89606.t1 MTR_4g070720 58.739 555 200 10 13 553 26 565 0.0 602
MS.gene89606.t1 MTR_4g070810 51.652 575 223 9 25 553 51 616 0.0 593
MS.gene89606.t1 MTR_5g021050 73.037 382 92 5 19 390 10 390 0.0 591
MS.gene89606.t1 MTR_5g021050 63.529 85 30 1 466 549 386 470 6.09e-25 108
MS.gene89606.t1 MTR_5g021050 73.037 382 92 5 19 390 10 390 0.0 590
MS.gene89606.t1 MTR_5g021050 63.529 85 30 1 466 549 386 470 5.82e-25 108
MS.gene89606.t1 MTR_3g117100 51.174 596 221 11 17 553 39 623 0.0 590
MS.gene89606.t1 MTR_3g117090 58.527 516 182 9 25 527 44 540 0.0 588
MS.gene89606.t1 MTR_1g022480 50.417 599 230 14 4 548 28 613 0.0 559
MS.gene89606.t1 MTR_1g022480 50.586 597 230 14 4 548 28 611 0.0 559
MS.gene89606.t1 MTR_1g022480 50.000 604 230 15 4 548 28 618 0.0 552
MS.gene89606.t1 MTR_3g112150 49.043 575 239 12 13 553 18 572 1.93e-178 515
MS.gene89606.t1 MTR_1g022480 51.569 510 191 12 82 548 31 527 1.05e-170 494
MS.gene89606.t1 MTR_6g015645 56.433 443 160 9 116 542 9 434 1.24e-168 486
MS.gene89606.t1 MTR_7g056587 42.806 556 259 10 28 548 56 587 9.86e-151 446
MS.gene89606.t1 MTR_7g056587 42.806 556 259 10 28 548 48 579 1.25e-150 445
MS.gene89606.t1 MTR_7g056587 42.806 556 259 10 28 548 56 587 1.43e-150 445
MS.gene89606.t1 MTR_7g056587 42.806 556 259 10 28 548 70 601 4.32e-150 444
MS.gene89606.t1 MTR_4g070790 62.308 260 98 0 56 315 61 320 2.02e-127 379
MS.gene89606.t1 MTR_7g056587 41.975 486 224 9 97 548 1 462 1.85e-125 377
MS.gene89606.t1 MTR_3g010190 49.867 377 174 4 17 378 32 408 2.96e-122 370
MS.gene89606.t1 MTR_5g012460 53.156 301 138 1 20 320 59 356 1.28e-114 348
MS.gene89606.t1 MTR_8g071000 57.627 295 120 3 35 327 48 339 9.58e-111 343
MS.gene89606.t1 MTR_4g070780 51.736 288 106 4 29 316 15 269 1.95e-99 307
MS.gene89606.t1 MTR_4g070730 52.281 285 92 5 39 322 29 270 1.72e-97 301
MS.gene89606.t1 MTR_6g034285 53.535 99 46 0 115 213 195 293 3.66e-30 122
MS.gene89606.t1 MTR_3g098530 30.667 225 133 7 73 294 63 267 3.32e-19 88.2
MS.gene89606.t1 MTR_3g060670 30.374 214 132 5 79 286 33 235 7.57e-19 88.6
MS.gene89606.t1 MTR_7g070480 28.889 225 138 7 79 295 100 310 4.01e-18 87.4
MS.gene89606.t1 MTR_2g027140 30.660 212 133 6 80 286 39 241 2.17e-17 84.0
MS.gene89606.t1 MTR_4g013300 29.515 227 135 7 79 295 125 336 5.03e-17 84.0
MS.gene89606.t1 MTR_8g095360 28.507 221 133 7 79 289 181 386 4.08e-16 81.6
MS.gene89606.t1 MTR_1g022185 32.093 215 120 9 80 289 46 239 2.14e-14 74.3
MS.gene89606.t1 MTR_4g033435 25.106 235 157 6 69 296 262 484 5.85e-14 75.1
MS.gene89606.t1 MTR_1g032580 30.275 218 123 9 80 289 32 228 1.92e-13 70.9
MS.gene89606.t1 MTR_2g027140 31.013 158 97 4 132 286 38 186 4.11e-13 70.1
MS.gene89606.t1 MTR_4g033435 24.883 213 142 5 69 275 262 462 7.57e-13 71.2
MS.gene89606.t1 MTR_3g097350 28.251 223 133 9 79 289 249 456 1.40e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89606.t1 AT4G36490 65.201 546 166 8 17 553 12 542 0.0 702
MS.gene89606.t1 AT2G18180 64.981 534 166 9 25 553 28 545 0.0 691
MS.gene89606.t1 AT2G18180 64.607 534 168 9 25 553 28 545 0.0 686
MS.gene89606.t1 AT2G18180 64.226 478 153 7 80 553 11 474 0.0 621
MS.gene89606.t1 AT2G21540 58.614 534 183 9 25 553 42 542 0.0 619
MS.gene89606.t1 AT2G21540 58.614 534 183 9 25 553 42 542 0.0 619
MS.gene89606.t1 AT4G34580 58.000 550 205 10 14 551 16 551 0.0 617
MS.gene89606.t1 AT4G34580 58.000 550 205 10 14 551 16 551 0.0 617
MS.gene89606.t1 AT2G21540 58.736 538 182 11 25 553 42 548 0.0 616
MS.gene89606.t1 AT2G21540 58.736 538 182 11 25 553 42 548 0.0 616
MS.gene89606.t1 AT2G21540 58.736 538 182 11 25 553 42 548 0.0 616
MS.gene89606.t1 AT2G21540 58.736 538 182 11 25 553 42 548 0.0 616
MS.gene89606.t1 AT2G18180 63.808 478 155 7 80 553 11 474 0.0 615
MS.gene89606.t1 AT4G39170 53.663 587 207 12 17 551 39 612 0.0 602
MS.gene89606.t1 AT2G18180 64.642 461 145 7 97 553 1 447 0.0 598
MS.gene89606.t1 AT4G39170 53.413 586 208 12 17 551 39 610 0.0 598
MS.gene89606.t1 AT4G39180 54.495 545 205 11 14 542 25 542 0.0 586
MS.gene89606.t1 AT4G39180 55.433 543 202 11 14 542 25 541 0.0 586
MS.gene89606.t1 AT4G39180 55.433 543 202 11 14 542 25 541 0.0 586
MS.gene89606.t1 AT2G21520 52.332 579 226 12 17 546 43 620 0.0 581
MS.gene89606.t1 AT2G21520 52.332 579 226 12 17 546 43 620 0.0 581
MS.gene89606.t1 AT2G21520 52.332 579 226 12 17 546 39 616 0.0 581
MS.gene89606.t1 AT2G16380 53.962 530 222 5 25 551 34 544 0.0 578
MS.gene89606.t1 AT2G16380 53.962 530 222 5 25 551 34 544 0.0 578
MS.gene89606.t1 AT1G19650 50.351 570 231 14 25 553 50 608 0.0 541
MS.gene89606.t1 AT1G75370 49.823 566 233 12 25 550 56 610 8.48e-173 502
MS.gene89606.t1 AT2G16380 53.712 458 190 5 97 551 1 439 3.02e-172 494
MS.gene89606.t1 AT1G75370 50.556 540 224 10 41 548 75 603 8.30e-172 502
MS.gene89606.t1 AT1G19650 50.096 519 207 14 76 553 29 536 1.30e-166 484
MS.gene89606.t1 AT1G19650 71.525 295 84 0 25 319 50 344 7.12e-165 476
MS.gene89606.t1 AT3G24840 43.609 532 268 9 25 546 49 558 2.04e-152 449
MS.gene89606.t1 AT3G24840 43.609 532 268 9 25 546 49 558 2.04e-152 449
MS.gene89606.t1 AT3G24840 43.609 532 268 9 25 546 49 558 2.04e-152 449
MS.gene89606.t1 AT3G24840 43.609 532 268 9 25 546 49 558 2.04e-152 449
MS.gene89606.t1 AT3G24840 43.985 532 267 9 25 546 49 559 1.26e-151 447
MS.gene89606.t1 AT3G24840 43.985 532 267 9 25 546 49 559 1.26e-151 447
MS.gene89606.t1 AT3G24840 43.985 532 267 9 25 546 49 559 1.26e-151 447
MS.gene89606.t1 AT1G55690 39.767 601 289 17 17 551 31 624 8.76e-127 385
MS.gene89606.t1 AT1G55690 39.767 601 289 17 17 551 31 624 8.76e-127 385
MS.gene89606.t1 AT1G55690 39.767 601 289 17 17 551 31 624 8.76e-127 385
MS.gene89606.t1 AT1G55690 39.767 601 289 17 17 551 31 624 8.76e-127 385
MS.gene89606.t1 AT1G55690 40.375 587 282 16 17 542 31 610 1.31e-126 384
MS.gene89606.t1 AT5G56160 37.852 568 298 13 17 549 25 572 1.85e-119 364
MS.gene89606.t1 AT5G56160 37.852 568 298 13 17 549 25 572 1.85e-119 364
MS.gene89606.t1 AT5G56160 53.846 312 136 2 17 320 25 336 2.05e-119 362
MS.gene89606.t1 AT5G47510 50.685 292 129 2 57 348 29 305 1.79e-106 323
MS.gene89606.t1 AT5G47510 50.685 292 129 2 57 348 29 305 4.97e-106 323
MS.gene89606.t1 AT5G47510 50.685 292 129 2 57 348 28 304 5.03e-106 323
MS.gene89606.t1 AT5G47510 51.145 262 113 2 87 348 2 248 5.07e-96 295
MS.gene89606.t1 AT5G47730 27.801 241 159 5 55 286 7 241 6.56e-20 91.7
MS.gene89606.t1 AT5G47730 27.801 241 159 5 55 286 7 241 6.56e-20 91.7
MS.gene89606.t1 AT1G72160 26.106 226 144 7 79 293 166 379 5.67e-17 84.3
MS.gene89606.t1 AT1G55840 27.686 242 158 6 55 286 7 241 2.13e-16 80.9
MS.gene89606.t1 AT1G55840 27.751 209 143 3 80 286 12 214 3.56e-16 79.7
MS.gene89606.t1 AT1G01630 28.302 212 133 7 79 289 52 245 5.32e-15 75.5
MS.gene89606.t1 AT5G47730 27.604 192 131 3 97 286 1 186 1.06e-14 75.1
MS.gene89606.t1 AT5G47730 27.604 192 131 3 97 286 1 186 1.06e-14 75.1
MS.gene89606.t1 AT4G09160 24.336 226 148 7 79 293 316 529 7.87e-13 71.6
MS.gene89606.t1 AT4G09160 24.336 226 148 7 79 293 316 529 8.15e-13 71.6
MS.gene89606.t1 AT4G09160 24.336 226 148 7 79 293 341 554 9.98e-13 71.2
MS.gene89606.t1 AT3G51670 26.641 259 160 10 79 329 84 320 7.04e-12 67.8

Find 114 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAGGATCCAGAAATAATT+AGG 0.204706 8.3:+27278221 MS.gene89606:CDS
TGGTTGGTTCCTTACCTTCT+TGG 0.209057 8.3:-27279661 None:intergenic
GGCTGAGTTGGAAGATAAAA+TGG 0.236999 8.3:+27279539 MS.gene89606:CDS
AGATCAAAGCACCACCATTT+TGG 0.254663 8.3:+27277324 MS.gene89606:CDS
AAGCTCACCCTAATTATTTC+TGG 0.258767 8.3:-27278229 None:intergenic
CTTATAATTCATCAGGTTCT+TGG 0.272833 8.3:+27277969 MS.gene89606:intron
TTCATCATCAATGCAGGTTC+TGG 0.291365 8.3:+27277805 MS.gene89606:CDS
AGTGAAAACTGCCTCCATTT+TGG 0.317937 8.3:-27278677 None:intergenic
TCGTGAATCTTGCACGAATC+AGG 0.322522 8.3:-27279297 None:intergenic
CACTCCTTGCACATCCAAAA+TGG 0.332252 8.3:-27277338 None:intergenic
AGCTGAAAGTTCCTCTTGTT+TGG 0.342344 8.3:-27280216 None:intergenic
AGCATGCAACTATGAGGATT+TGG 0.371147 8.3:+27279053 MS.gene89606:CDS
TGCTCTCGAGCAAGAACTTA+TGG 0.372939 8.3:+27279635 MS.gene89606:CDS
CTTCAGTGGAGGAAAGAGTT+TGG 0.374187 8.3:+27276942 MS.gene89606:CDS
CATAAACTCTTGAGCAGAAA+TGG 0.374213 8.3:-27279499 None:intergenic
GGAAAGCCAGTCTTCCAAAA+TGG 0.382371 8.3:+27278663 MS.gene89606:intron
TTAAGCATTTCTTCCTTCTC+AGG 0.391104 8.3:-27279591 None:intergenic
TGATAGTCATCATGCTTCTC+AGG 0.395171 8.3:-27276102 None:intergenic
ATTCCGTCAGGCTCTTGTAT+TGG 0.414478 8.3:+27276068 MS.gene89606:CDS
TTATTTCAAGCAATTTGCTT+TGG 0.415607 8.3:-27278001 None:intergenic
AGGCTGCATGCGTTCTGATA+AGG 0.418194 8.3:+27278192 MS.gene89606:CDS
GGCTGCATGCGTTCTGATAA+GGG 0.425044 8.3:+27278193 MS.gene89606:CDS
TATTATCCTCATGGAAATCA+TGG 0.437496 8.3:+27277130 MS.gene89606:CDS
GATGATGAACATGCGATTCA+AGG 0.442324 8.3:-27277791 None:intergenic
GAAGGATCCAGAAATAATTA+GGG 0.448453 8.3:+27278222 MS.gene89606:CDS
TTGGCATCAGTGAGCCTCTT+CGG 0.449322 8.3:-27279402 None:intergenic
AAATGGTAGGGTTGGTCAAA+TGG 0.453415 8.3:-27279482 None:intergenic
ATTATTTCTGGATCCTTCCA+TGG 0.464756 8.3:-27278217 None:intergenic
AGCTGAAGTAGAAGCTTTGA+CGG 0.469996 8.3:+27279272 MS.gene89606:intron
ATGACTATCATATGCTGCTC+AGG 0.472164 8.3:+27276115 MS.gene89606:CDS
CCCAACCTCTCAATGTAGAT+TGG 0.474017 8.3:-27277172 None:intergenic
TGGCCTTTGATAGGCTTTGG+AGG 0.476483 8.3:+27280184 MS.gene89606:intron
ACCAATCTACATTGAGAGGT+TGG 0.483076 8.3:+27277171 MS.gene89606:CDS
AGCAGAATTTGAGTAGAAGT+TGG 0.488453 8.3:-27279421 None:intergenic
TACTCAAATTCTGCTTACTC+TGG 0.489933 8.3:+27279429 MS.gene89606:CDS
TTGCGGTGGTCTTTGGGTCA+AGG 0.499119 8.3:-27277861 None:intergenic
GAGTAGGCGTAGCAGTAGTA+AGG 0.500105 8.3:+27275987 MS.gene89606:CDS
CGGCATGATGGCCTTTGTGA+TGG 0.502527 8.3:+27279344 MS.gene89606:CDS
CACTTGCATGCCACCTGAGA+AGG 0.503791 8.3:+27279578 MS.gene89606:CDS
TATGTGTTTCTTTGCAGCAA+TGG 0.513172 8.3:-27277302 None:intergenic
ACTTGTACCTGCGCAGATCA+AGG 0.515493 8.3:+27278169 MS.gene89606:CDS
AAGTCATTTGCAGTACCAAA+AGG 0.515742 8.3:+27279120 MS.gene89606:CDS
TTTGCAGCAATGGTACAAGC+TGG 0.516118 8.3:-27277292 None:intergenic
AATCATGGAGTAGATAAAGA+AGG 0.519269 8.3:+27277145 MS.gene89606:CDS
CGCATGTTCATCATCAATGC+AGG 0.520480 8.3:+27277799 MS.gene89606:CDS
TTTCAAATTTCCTTGCCCTA+AGG 0.522123 8.3:-27276887 None:intergenic
CCAATCTACATTGAGAGGTT+GGG 0.522995 8.3:+27277172 MS.gene89606:CDS
ATGGTGAACACAAAACTTCA+AGG 0.523618 8.3:+27278493 MS.gene89606:CDS
TGTTGTGACTTGCAACAACT+TGG 0.531481 8.3:-27277209 None:intergenic
AGCCGTTGATGAATTCCGTC+AGG 0.535707 8.3:+27276056 MS.gene89606:CDS
TATGAAGCGCATGGCTGAGT+TGG 0.536946 8.3:+27279527 MS.gene89606:CDS
GCAGCCTCCTTGATCTGCGC+AGG 0.537415 8.3:-27278176 None:intergenic
TGAACAGATTCCTTAGGGCA+AGG 0.538766 8.3:+27276877 MS.gene89606:intron
GTGTTGCAATATTATCCTCA+TGG 0.540758 8.3:+27277121 MS.gene89606:CDS
AGAACTTCAACAAACAAGCC+AGG 0.542596 8.3:+27277591 MS.gene89606:CDS
GTCAAAAGCATGCAACTATG+AGG 0.543345 8.3:+27279047 MS.gene89606:CDS
AAGGCGTGTGATAAGCTCCC+TGG 0.544648 8.3:-27277609 None:intergenic
CTTCTCAGGTGGCATGCAAG+TGG 0.545083 8.3:-27279577 None:intergenic
GCTGAGTTGGAAGATAAAAT+GGG 0.546715 8.3:+27279540 MS.gene89606:CDS
AGAACTTATGGCAACCAAGA+AGG 0.546748 8.3:+27279647 MS.gene89606:CDS
GGCATGATGGCCTTTGTGAT+GGG 0.550235 8.3:+27279345 MS.gene89606:CDS
TTGAGCAGAAATGGTAGGGT+TGG 0.551013 8.3:-27279490 None:intergenic
TTCTCTCAAATTCCTTGACA+TGG 0.551480 8.3:-27277252 None:intergenic
TACGCCTACTCCTCCTTGTG+AGG 0.554578 8.3:-27275975 None:intergenic
TGGAACTGATACCATTGTTG+AGG 0.564713 8.3:+27276962 MS.gene89606:CDS
TGCGTTCTGATAAGGGTCCA+TGG 0.566595 8.3:+27278200 MS.gene89606:CDS
TGTGACTTGCAACAACTTGG+TGG 0.568028 8.3:-27277206 None:intergenic
AACTCTTGAGCAGAAATGGT+AGG 0.570416 8.3:-27279495 None:intergenic
CAAAACTTCAAGGAAAATTG+AGG 0.571777 8.3:+27278503 MS.gene89606:CDS
TTCTGATAAGGGTCCATGGA+AGG 0.576550 8.3:+27278204 MS.gene89606:CDS
AGCATTTCTTCCTTCTCAGG+TGG 0.579838 8.3:-27279588 None:intergenic
CTTGACAAGATTGACCGTGT+TGG 0.581194 8.3:+27275925 MS.gene89606:CDS
ACTCTTGAGCAGAAATGGTA+GGG 0.581478 8.3:-27279494 None:intergenic
ATTCCCTCACAAGGAGGAGT+AGG 0.584210 8.3:+27275971 MS.gene89606:CDS
GATAGTCATCATGCTTCTCA+GGG 0.586148 8.3:-27276101 None:intergenic
CATCACAAAGGCCATCATGC+CGG 0.586671 8.3:-27279343 None:intergenic
TAAAACTGCTTGGCAGATGG+TGG 0.588527 8.3:+27279089 MS.gene89606:CDS
CTATGAGGATTTGGTCCCTG+TGG 0.588688 8.3:+27279062 MS.gene89606:CDS
TCAAATTCTGCTTACTCTGG+TGG 0.589670 8.3:+27279432 MS.gene89606:CDS
GTTTCGTGTCATTCTCACCA+TGG 0.593462 8.3:-27279376 None:intergenic
TGATAAAACTGCTTGGCAGA+TGG 0.595650 8.3:+27279086 MS.gene89606:CDS
TGCTTGAAATAATTGATGCA+AGG 0.608642 8.3:+27278012 MS.gene89606:CDS
ACGCCTACTCCTCCTTGTGA+GGG 0.609402 8.3:-27275974 None:intergenic
CGTTGAAGAGAAAACTTCTG+AGG 0.611677 8.3:+27278533 MS.gene89606:CDS
TGTCACCGTCGATCTTCTGA+AGG 0.615112 8.3:-27277628 None:intergenic
CTGTGGCTGATAAAACTGCT+TGG 0.615485 8.3:+27279079 MS.gene89606:CDS
TGACACGAAACATGCCGAAG+AGG 0.616405 8.3:+27279388 MS.gene89606:CDS
ATATATCAAATACCATGTCA+AGG 0.616755 8.3:+27277240 MS.gene89606:CDS
GAAGACCAATCTACATTGAG+AGG 0.617413 8.3:+27277167 MS.gene89606:CDS
TGTGGTCTGACATGCTTCAG+TGG 0.619871 8.3:+27276928 MS.gene89606:CDS
GAACTTCAACAAACAAGCCA+GGG 0.620221 8.3:+27277592 MS.gene89606:CDS
GGATTCACTTGCCAAACAAG+AGG 0.623906 8.3:+27280205 MS.gene89606:CDS
ATTGTCTACTGTCTATGCCA+AGG 0.624072 8.3:+27278705 MS.gene89606:CDS
TTGATAAATCAAAGCAAATG+TGG 0.624613 8.3:+27276910 MS.gene89606:CDS
TGCTGAGGGATTCCCTCACA+AGG 0.625632 8.3:+27275962 MS.gene89606:CDS
AAGCCAGTCTTCCAAAATGG+AGG 0.631378 8.3:+27278666 MS.gene89606:CDS
TCTGATATTCAATCTCCCAA+AGG 0.637824 8.3:+27275814 MS.gene89606:CDS
GTTCTGGATTCAGAATGTTG+TGG 0.644706 8.3:+27277821 MS.gene89606:CDS
AGCCTGACGGAATTCATCAA+CGG 0.645047 8.3:-27276058 None:intergenic
GGTTATGTCAGTTGAAATCG+AGG 0.645910 8.3:+27276008 MS.gene89606:CDS
TCCTTGCACATCCAAAATGG+TGG 0.658644 8.3:-27277335 None:intergenic
GTTGTTGCAAGTCACAACAA+TGG 0.663408 8.3:+27277213 MS.gene89606:CDS
ATATATATATACCTCAACAA+TGG 0.671566 8.3:-27276973 None:intergenic
CATCCAATACAAGAGCCTGA+CGG 0.672464 8.3:-27276071 None:intergenic
ACACGCCTTCAGAAGATCGA+CGG 0.680558 8.3:+27277623 MS.gene89606:CDS
TCTACTCCATGATTTCCATG+AGG 0.681506 8.3:-27277136 None:intergenic
GGTTATGAGTCCCATCACAA+AGG 0.686118 8.3:-27279355 None:intergenic
AACTTGCAGATGGTTCAGAA+TGG 0.686577 8.3:+27278474 MS.gene89606:intron
CTTTCAAATCATCAGCGTCG+CGG 0.688219 8.3:-27276035 None:intergenic
TATGACTGTTATGAAGCGCA+TGG 0.688361 8.3:+27279518 MS.gene89606:CDS
TGTACCTGCGCAGATCAAGG+AGG 0.734452 8.3:+27278172 MS.gene89606:CDS
TGAGGGATTCCCTCACAAGG+AGG 0.739739 8.3:+27275965 MS.gene89606:CDS
GGTCTGACATGCTTCAGTGG+AGG 0.751603 8.3:+27276931 MS.gene89606:CDS
TGTGATGGGACTCATAACCA+TGG 0.770040 8.3:+27279359 MS.gene89606:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATATATACTAACAAAA+TGG - chr8.3:27280159-27280178 None:intergenic 10.0%
!! TTAAAAAAAAAACAGATAAA+AGG - chr8.3:27278598-27278617 None:intergenic 10.0%
!! TTAGTATATATAATAATGTT+TGG + chr8.3:27280164-27280183 MS.gene89606:intron 10.0%
!!! ATATAACATATAGTTTTTAT+TGG - chr8.3:27278838-27278857 None:intergenic 10.0%
!! AAAAAAGTAATACATGTATT+TGG + chr8.3:27278761-27278780 MS.gene89606:intron 15.0%
!! AAAATCATATTAGAAGTTAA+TGG - chr8.3:27279684-27279703 None:intergenic 15.0%
!! ATATGAAGAAAAAAAAAACT+GGG - chr8.3:27277042-27277061 None:intergenic 15.0%
!! TAATGTTCAAAATATTAGAT+AGG - chr8.3:27279205-27279224 None:intergenic 15.0%
!! TAGTCATATTAAAATATGAT+TGG + chr8.3:27280036-27280055 MS.gene89606:intron 15.0%
!! TATATGAAGAAAAAAAAAAC+TGG - chr8.3:27277043-27277062 None:intergenic 15.0%
!! TTAAAATAGATATTTGTGTA+AGG + chr8.3:27276647-27276666 MS.gene89606:intron 15.0%
!!! AAATATTGTTTTAATGTTAC+AGG + chr8.3:27277562-27277581 MS.gene89606:intron 15.0%
!!! AATATAAAGATTTTGTTAAG+AGG - chr8.3:27275877-27275896 None:intergenic 15.0%
!!! AATATTGTTTTAATGTTACA+GGG + chr8.3:27277563-27277582 MS.gene89606:intron 15.0%
!!! AATTTTATGATATTACAACT+CGG - chr8.3:27277754-27277773 None:intergenic 15.0%
!!! ATATTTTCCCTAATATTTTT+TGG + chr8.3:27276263-27276282 MS.gene89606:intron 15.0%
!!! ATTTGTTAATAAGTTGAAAA+TGG + chr8.3:27276206-27276225 MS.gene89606:intron 15.0%
!!! TTTTATGCAAATAAATATTG+TGG + chr8.3:27277721-27277740 MS.gene89606:intron 15.0%
!! AATTGAACTTATAATTCATC+AGG + chr8.3:27277962-27277981 MS.gene89606:intron 20.0%
!! ATATATAACACCATTATCAA+CGG - chr8.3:27278453-27278472 None:intergenic 20.0%
!! ATATATATATACCTCAACAA+TGG - chr8.3:27276976-27276995 None:intergenic 20.0%
!! ATTCAAAATCCTAGAATAAA+AGG - chr8.3:27277084-27277103 None:intergenic 20.0%
!! TAGATAAAAATACATACTTC+AGG - chr8.3:27277659-27277678 None:intergenic 20.0%
!! TATGAAGAAAAAAAAAACTG+GGG - chr8.3:27277041-27277060 None:intergenic 20.0%
!! TGAAAATAGTTATGAAATGA+AGG - chr8.3:27278072-27278091 None:intergenic 20.0%
!!! ATATTGTTTTAATGTTACAG+GGG + chr8.3:27277564-27277583 MS.gene89606:intron 20.0%
!!! CATAGTTTTAAATTTGGATT+TGG - chr8.3:27280075-27280094 None:intergenic 20.0%
!!! TAGGTTTTAAATTGATGTTA+CGG + chr8.3:27279730-27279749 MS.gene89606:intron 20.0%
!!! TGCAATCATAGTTTTAAATT+TGG - chr8.3:27280081-27280100 None:intergenic 20.0%
!!! TTCTTATTTTTTGTATGTGT+AGG + chr8.3:27278642-27278661 MS.gene89606:intron 20.0%
!!! TTTGATAGTTTTGTTTAATG+TGG + chr8.3:27278897-27278916 MS.gene89606:intron 20.0%
!!! TTTTTTAATGCAGTTTCAAT+GGG + chr8.3:27280378-27280397 MS.gene89606:intron 20.0%
!!! TTTTTTCGTATGTTTTGTTA+CGG - chr8.3:27278747-27278766 None:intergenic 20.0%
!!! TTTTTTTAATGCAGTTTCAA+TGG + chr8.3:27280377-27280396 MS.gene89606:intron 20.0%
! AAAGAAAAAGAAGAAGAAGT+TGG + chr8.3:27280250-27280269 MS.gene89606:CDS 25.0%
! AAATTGTGGATAAACATAAC+AGG + chr8.3:27279017-27279036 MS.gene89606:intron 25.0%
! AATACAGTGTATGTTAACAA+AGG + chr8.3:27276757-27276776 MS.gene89606:intron 25.0%
! AGTATACATAAACACTGATA+CGG + chr8.3:27276476-27276495 MS.gene89606:intron 25.0%
! ATACAGTGTATGTTAACAAA+GGG + chr8.3:27276758-27276777 MS.gene89606:intron 25.0%
! ATATATCAAATACCATGTCA+AGG + chr8.3:27277240-27277259 MS.gene89606:CDS 25.0%
! ATATTAAAATATGATTGGCG+TGG + chr8.3:27280041-27280060 MS.gene89606:intron 25.0%
! ATCATCGCAAAATAAAAAGA+TGG - chr8.3:27278260-27278279 None:intergenic 25.0%
! GAGTATATACTAATATACCT+TGG - chr8.3:27278725-27278744 None:intergenic 25.0%
! GAGTTATTTGTTCAAACATT+TGG + chr8.3:27278572-27278591 MS.gene89606:intron 25.0%
! TATCAACGGAAATCAATAAA+GGG - chr8.3:27278439-27278458 None:intergenic 25.0%
! TCATATTAGAAGTTAATGGT+TGG - chr8.3:27279680-27279699 None:intergenic 25.0%
! TTATCAACGGAAATCAATAA+AGG - chr8.3:27278440-27278459 None:intergenic 25.0%
! TTATCTATAAGCTAACCTAA+AGG + chr8.3:27276405-27276424 MS.gene89606:intron 25.0%
! TTATTGAGCAATATCTACAT+AGG - chr8.3:27276739-27276758 None:intergenic 25.0%
! TTCCGGATACAATAAAATAT+CGG + chr8.3:27278330-27278349 MS.gene89606:intron 25.0%
! TTGATAAATCAAAGCAAATG+TGG + chr8.3:27276910-27276929 MS.gene89606:CDS 25.0%
! TTGTCAAATAGTTACTATAG+CGG + chr8.3:27277496-27277515 MS.gene89606:intron 25.0%
! TTGTCTTCTTTATGATTCAA+TGG - chr8.3:27278923-27278942 None:intergenic 25.0%
! TTTGCTTGTATTTCAAGAAA+TGG + chr8.3:27277925-27277944 MS.gene89606:intron 25.0%
! TTTGGTTAAACAGCTTAATT+AGG + chr8.3:27276342-27276361 MS.gene89606:intron 25.0%
!! AATCTGGATCTTTTAAATTG+TGG - chr8.3:27279885-27279904 None:intergenic 25.0%
!! ATAAAGAAGACAACACATTT+TGG + chr8.3:27278930-27278949 MS.gene89606:intron 25.0%
!! ATCTACATATATGTACCTTT+TGG - chr8.3:27279138-27279157 None:intergenic 25.0%
!! ATTTTTGTGCCTTTTATTCT+AGG + chr8.3:27277072-27277091 MS.gene89606:intron 25.0%
!! TAATAAGTTGAAAATGGTAG+AGG + chr8.3:27276212-27276231 MS.gene89606:intron 25.0%
!! TTATTTCAAGCAATTTGCTT+TGG - chr8.3:27278004-27278023 None:intergenic 25.0%
!!! ACACTATTTTAAGATGTGTT+TGG + chr8.3:27276324-27276343 MS.gene89606:intron 25.0%
!!! TATTTTCAAAAGTGTACTTC+CGG + chr8.3:27278313-27278332 MS.gene89606:intron 25.0%
!!! TGTTTTTTGAGAAAGAGATA+TGG - chr8.3:27275852-27275871 None:intergenic 25.0%
!!! TTATTGATTTCCGTTGATAA+TGG + chr8.3:27278440-27278459 MS.gene89606:intron 25.0%
AAATGAACATGAAAGTTGTG+TGG - chr8.3:27278109-27278128 None:intergenic 30.0%
AAATTGTGGCATAACAATTG+TGG - chr8.3:27279871-27279890 None:intergenic 30.0%
AACCTAAAGGATATTGAAAC+AGG + chr8.3:27276418-27276437 MS.gene89606:intron 30.0%
AAGAAACACATGCAATACAT+AGG - chr8.3:27278979-27278998 None:intergenic 30.0%
AATCATGGAGTAGATAAAGA+AGG + chr8.3:27277145-27277164 MS.gene89606:CDS 30.0%
ACAAATAATCAGTAGCACAT+TGG - chr8.3:27276192-27276211 None:intergenic 30.0%
ATCAACGGAAATCAATAAAG+GGG - chr8.3:27278438-27278457 None:intergenic 30.0%
ATGCGGTACCAAAAAATATT+AGG - chr8.3:27276274-27276293 None:intergenic 30.0%
CAAAACTTCAAGGAAAATTG+AGG + chr8.3:27278503-27278522 MS.gene89606:CDS 30.0%
CTATGTGCAATAAGAGATAA+AGG - chr8.3:27279713-27279732 None:intergenic 30.0%
CTTATAATTCATCAGGTTCT+TGG + chr8.3:27277969-27277988 MS.gene89606:intron 30.0%
CTTTATCTCTTATTGCACAT+AGG + chr8.3:27279711-27279730 MS.gene89606:intron 30.0%
GAAGGATCCAGAAATAATTA+GGG + chr8.3:27278222-27278241 MS.gene89606:CDS 30.0%
GTTATATATGAACTTGCAGA+TGG + chr8.3:27278464-27278483 MS.gene89606:intron 30.0%
TAATTTCAGATGTACACATC+TGG - chr8.3:27278393-27278412 None:intergenic 30.0%
TACTCTTGAGTACAAAATTG+TGG + chr8.3:27279003-27279022 MS.gene89606:intron 30.0%
TATTATCCTCATGGAAATCA+TGG + chr8.3:27277130-27277149 MS.gene89606:CDS 30.0%
TCCGGATACAATAAAATATC+GGG + chr8.3:27278331-27278350 MS.gene89606:intron 30.0%
TGCGGTACCAAAAAATATTA+GGG - chr8.3:27276273-27276292 None:intergenic 30.0%
TGCTTGAAATAATTGATGCA+AGG + chr8.3:27278012-27278031 MS.gene89606:CDS 30.0%
TTTGAGTGTCTCATCAAATA+AGG + chr8.3:27276297-27276316 MS.gene89606:intron 30.0%
TTTGTTAGTAAGTTGTCCTA+GGG + chr8.3:27276367-27276386 MS.gene89606:intron 30.0%
! AATAATGTTTGGCCTTTGAT+AGG + chr8.3:27280175-27280194 MS.gene89606:intron 30.0%
! AATGTTTTCCACAAGACTTA+AGG + chr8.3:27277006-27277025 MS.gene89606:intron 30.0%
! AGATTTTCTTTTGAACAAGC+AGG - chr8.3:27276823-27276842 None:intergenic 30.0%
! ATGTTTTCCACAAGACTTAA+GGG + chr8.3:27277007-27277026 MS.gene89606:intron 30.0%
! ATTTGTTAGTAAGTTGTCCT+AGG + chr8.3:27276366-27276385 MS.gene89606:intron 30.0%
! CATTTTGTGCATGAGTAATA+AGG + chr8.3:27276784-27276803 MS.gene89606:intron 30.0%
! GTGTACATCTGAAATTATGT+TGG + chr8.3:27278396-27278415 MS.gene89606:intron 30.0%
! TACATCTGAAATTATGTTGG+AGG + chr8.3:27278399-27278418 MS.gene89606:intron 30.0%
! TCCCGATATTTTATTGTATC+CGG - chr8.3:27278335-27278354 None:intergenic 30.0%
! TTGATGTGAGTATCTTCTTT+TGG + chr8.3:27278857-27278876 MS.gene89606:intron 30.0%
! TTTTCATGAGAAAATGCTAG+CGG - chr8.3:27276623-27276642 None:intergenic 30.0%
! TTTTCTGAACAGATTCCTTA+GGG + chr8.3:27276872-27276891 MS.gene89606:intron 30.0%
! TTTTTCTGAACAGATTCCTT+AGG + chr8.3:27276871-27276890 MS.gene89606:intron 30.0%
!!! ATTCTAGGATTTTGAATTCG+AGG + chr8.3:27277087-27277106 MS.gene89606:intron 30.0%
AAGCTCACCCTAATTATTTC+TGG - chr8.3:27278232-27278251 None:intergenic 35.0%
AAGTCATTTGCAGTACCAAA+AGG + chr8.3:27279120-27279139 MS.gene89606:CDS 35.0%
ACACATGCAATACATAGGAA+TGG - chr8.3:27278974-27278993 None:intergenic 35.0%
ACATGAAAGTTGTGTGGAAT+AGG - chr8.3:27278103-27278122 None:intergenic 35.0%
AGCAGAATTTGAGTAGAAGT+TGG - chr8.3:27279424-27279443 None:intergenic 35.0%
AGCCTGTTTCAATATCCTTT+AGG - chr8.3:27276423-27276442 None:intergenic 35.0%
ATCGTTGAAAAAGATGCTGA+GGG + chr8.3:27275948-27275967 MS.gene89606:CDS 35.0%
ATGAGACACTCAAATACATG+CGG - chr8.3:27276291-27276310 None:intergenic 35.0%
ATGGTGAACACAAAACTTCA+AGG + chr8.3:27278493-27278512 MS.gene89606:CDS 35.0%
CATAAACTCTTGAGCAGAAA+TGG - chr8.3:27279502-27279521 None:intergenic 35.0%
CATATGAAATAGGACACTGA+AGG + chr8.3:27276533-27276552 MS.gene89606:intron 35.0%
CTTCAGTGTCCTATTTCATA+TGG - chr8.3:27276535-27276554 None:intergenic 35.0%
GATCTATGTATCTTCTCACA+TGG - chr8.3:27277891-27277910 None:intergenic 35.0%
GGAAGGATCCAGAAATAATT+AGG + chr8.3:27278221-27278240 MS.gene89606:CDS 35.0%
GTAGTCTAGCCATATGAAAT+AGG + chr8.3:27276523-27276542 MS.gene89606:intron 35.0%
GTGTTGCAATATTATCCTCA+TGG + chr8.3:27277121-27277140 MS.gene89606:CDS 35.0%
GTTGTCTTACTCCTTGTTAA+GGG - chr8.3:27276702-27276721 None:intergenic 35.0%
TAAAAACTCTGGCAATTCAC+TGG - chr8.3:27278143-27278162 None:intergenic 35.0%
TACTCAAATTCTGCTTACTC+TGG + chr8.3:27279429-27279448 MS.gene89606:CDS 35.0%
TATGTGTTTCTTTGCAGCAA+TGG - chr8.3:27277305-27277324 None:intergenic 35.0%
TATTTAACAACACTGCTGCT+TGG - chr8.3:27277397-27277416 None:intergenic 35.0%
TCTGATATTCAATCTCCCAA+AGG + chr8.3:27275814-27275833 MS.gene89606:CDS 35.0%
TCTTTCAACTTCCCTTAACA+AGG + chr8.3:27276688-27276707 MS.gene89606:intron 35.0%
TGGATTGAGATGAAACCTTT+GGG - chr8.3:27275832-27275851 None:intergenic 35.0%
TGTTGTCTTACTCCTTGTTA+AGG - chr8.3:27276703-27276722 None:intergenic 35.0%
TTAAGCATTTCTTCCTTCTC+AGG - chr8.3:27279594-27279613 None:intergenic 35.0%
TTACACGTAGTAAACGATCA+CGG + chr8.3:27279930-27279949 MS.gene89606:intron 35.0%
TTCTCTCAAATTCCTTGACA+TGG - chr8.3:27277255-27277274 None:intergenic 35.0%
TTGAAGTCTTTGCAATTGCA+TGG - chr8.3:27279831-27279850 None:intergenic 35.0%
TTTCAAATTTCCTTGCCCTA+AGG - chr8.3:27276890-27276909 None:intergenic 35.0%
TTTGAACAAGCAGGTTTACT+TGG - chr8.3:27276814-27276833 None:intergenic 35.0%
! AGTGAATTGCCAGAGTTTTT+AGG + chr8.3:27278142-27278161 MS.gene89606:intron 35.0%
! ATCTGAAATTATGTTGGAGG+TGG + chr8.3:27278402-27278421 MS.gene89606:intron 35.0%
! ATGGATTGAGATGAAACCTT+TGG - chr8.3:27275833-27275852 None:intergenic 35.0%
! CACGGTCATTAATTTGAGAT+CGG + chr8.3:27279948-27279967 MS.gene89606:intron 35.0%
! GAAGTTTTCTCTTCAACGAT+AGG - chr8.3:27278531-27278550 None:intergenic 35.0%
! GCTGAGTTGGAAGATAAAAT+GGG + chr8.3:27279540-27279559 MS.gene89606:CDS 35.0%
! TCTTCTCACATGGATTTTTG+CGG - chr8.3:27277881-27277900 None:intergenic 35.0%
! TGTTTTCCACAAGACTTAAG+GGG + chr8.3:27277008-27277027 MS.gene89606:intron 35.0%
! TTTTGAATTCGAGGAACTTG+AGG + chr8.3:27277096-27277115 MS.gene89606:CDS 35.0%
! TTTTGGTACTGCAAATGACT+TGG - chr8.3:27279121-27279140 None:intergenic 35.0%
!! ATTATTTCTGGATCCTTCCA+TGG - chr8.3:27278220-27278239 None:intergenic 35.0%
!!! AGTTTTTTTAGTAGCTGAGC+GGG - chr8.3:27278289-27278308 None:intergenic 35.0%
!!! GAGTTTTTTTAGTAGCTGAG+CGG - chr8.3:27278290-27278309 None:intergenic 35.0%
!!! TCTTTTTCAACGATCCAACA+CGG - chr8.3:27275942-27275961 None:intergenic 35.0%
!!! TTTTTTTACAGCACGCAATC+TGG - chr8.3:27279901-27279920 None:intergenic 35.0%
AACTCTTGAGCAGAAATGGT+AGG - chr8.3:27279498-27279517 None:intergenic 40.0%
AACTTGCAGATGGTTCAGAA+TGG + chr8.3:27278474-27278493 MS.gene89606:intron 40.0%
AATCCTCCAAAGCCTATCAA+AGG - chr8.3:27280190-27280209 None:intergenic 40.0%
ACCAATCTACATTGAGAGGT+TGG + chr8.3:27277171-27277190 MS.gene89606:CDS 40.0%
ACTCTTGAGCAGAAATGGTA+GGG - chr8.3:27279497-27279516 None:intergenic 40.0%
AGAACTTATGGCAACCAAGA+AGG + chr8.3:27279647-27279666 MS.gene89606:CDS 40.0%
AGAACTTCAACAAACAAGCC+AGG + chr8.3:27277591-27277610 MS.gene89606:CDS 40.0%
AGCATGCAACTATGAGGATT+TGG + chr8.3:27279053-27279072 MS.gene89606:CDS 40.0%
AGCTGAAAGTTCCTCTTGTT+TGG - chr8.3:27280219-27280238 None:intergenic 40.0%
ATCGGGAAGTTTACTTCTAG+AGG + chr8.3:27278348-27278367 MS.gene89606:intron 40.0%
ATGACTATCATATGCTGCTC+AGG + chr8.3:27276115-27276134 MS.gene89606:CDS 40.0%
ATGGCTAGACTACATCTTTG+AGG - chr8.3:27276516-27276535 None:intergenic 40.0%
ATTGTCTACTGTCTATGCCA+AGG + chr8.3:27278705-27278724 MS.gene89606:CDS 40.0%
CAAGTACCTCCTAAAAACTC+TGG - chr8.3:27278154-27278173 None:intergenic 40.0%
CCAATCTACATTGAGAGGTT+GGG + chr8.3:27277172-27277191 MS.gene89606:CDS 40.0%
CGTTGAAGAGAAAACTTCTG+AGG + chr8.3:27278533-27278552 MS.gene89606:CDS 40.0%
GAACTTCAACAAACAAGCCA+GGG + chr8.3:27277592-27277611 MS.gene89606:CDS 40.0%
GAAGACCAATCTACATTGAG+AGG + chr8.3:27277167-27277186 MS.gene89606:CDS 40.0%
GATAGTCATCATGCTTCTCA+GGG - chr8.3:27276104-27276123 None:intergenic 40.0%
GATCGTTGAAAAAGATGCTG+AGG + chr8.3:27275947-27275966 MS.gene89606:CDS 40.0%
GATGATGAACATGCGATTCA+AGG - chr8.3:27277794-27277813 None:intergenic 40.0%
GCTATAGCAATGTCATGTAG+TGG + chr8.3:27277520-27277539 MS.gene89606:intron 40.0%
GGTTATGTCAGTTGAAATCG+AGG + chr8.3:27276008-27276027 MS.gene89606:CDS 40.0%
GTCCTAGGGAGATTATGTAA+GGG + chr8.3:27276381-27276400 MS.gene89606:intron 40.0%
GTTGTTGCAAGTCACAACAA+TGG + chr8.3:27277213-27277232 MS.gene89606:CDS 40.0%
TATGACTGTTATGAAGCGCA+TGG + chr8.3:27279518-27279537 MS.gene89606:CDS 40.0%
TCAAATTCTGCTTACTCTGG+TGG + chr8.3:27279432-27279451 MS.gene89606:CDS 40.0%
TCTACTCCATGATTTCCATG+AGG - chr8.3:27277139-27277158 None:intergenic 40.0%
TGATAAAACTGCTTGGCAGA+TGG + chr8.3:27279086-27279105 MS.gene89606:CDS 40.0%
TGATAGTCATCATGCTTCTC+AGG - chr8.3:27276105-27276124 None:intergenic 40.0%
TGGAACTGATACCATTGTTG+AGG + chr8.3:27276962-27276981 MS.gene89606:CDS 40.0%
TGTCCTAGGGAGATTATGTA+AGG + chr8.3:27276380-27276399 MS.gene89606:intron 40.0%
TTATGGCAACCAAGAAGGTA+AGG + chr8.3:27279652-27279671 MS.gene89606:intron 40.0%
TTCATCATCAATGCAGGTTC+TGG + chr8.3:27277805-27277824 MS.gene89606:CDS 40.0%
TTGAATCCCCTTAAGTCTTG+TGG - chr8.3:27277017-27277036 None:intergenic 40.0%
! AGCTGAAGTAGAAGCTTTGA+CGG + chr8.3:27279272-27279291 MS.gene89606:intron 40.0%
! AGTGAAAACTGCCTCCATTT+TGG - chr8.3:27278680-27278699 None:intergenic 40.0%
! AGTTGCATGCTTTTGACGAA+GGG - chr8.3:27279044-27279063 None:intergenic 40.0%
! GCAGCAGTGTTGTTAAATAG+CGG + chr8.3:27277398-27277417 MS.gene89606:intron 40.0%
! GGCTGAGTTGGAAGATAAAA+TGG + chr8.3:27279539-27279558 MS.gene89606:CDS 40.0%
! GTCAAAAGCATGCAACTATG+AGG + chr8.3:27279047-27279066 MS.gene89606:CDS 40.0%
! GTGAACTCACAGATTTTCAC+CGG + chr8.3:27279324-27279343 MS.gene89606:CDS 40.0%
! GTTCTGGATTCAGAATGTTG+TGG + chr8.3:27277821-27277840 MS.gene89606:CDS 40.0%
! TAGTTGCATGCTTTTGACGA+AGG - chr8.3:27279045-27279064 None:intergenic 40.0%
! TGTTGTGACTTGCAACAACT+TGG - chr8.3:27277212-27277231 None:intergenic 40.0%
!! AAATGGTAGGGTTGGTCAAA+TGG - chr8.3:27279485-27279504 None:intergenic 40.0%
!! AAGCAGTTTTATCAGCCACA+GGG - chr8.3:27279080-27279099 None:intergenic 40.0%
!! AGATCAAAGCACCACCATTT+TGG + chr8.3:27277324-27277343 MS.gene89606:CDS 40.0%
!! ATGCTAGCGGTTAGTTTGTT+AGG - chr8.3:27276610-27276629 None:intergenic 40.0%
!! GAATTGCCAGAGTTTTTAGG+AGG + chr8.3:27278145-27278164 MS.gene89606:CDS 40.0%
!! TGCTAGCGGTTAGTTTGTTA+GGG - chr8.3:27276609-27276628 None:intergenic 40.0%
!!! GTTTTTTTAGTAGCTGAGCG+GGG - chr8.3:27278288-27278307 None:intergenic 40.0%
AAGCCAGTCTTCCAAAATGG+AGG + chr8.3:27278666-27278685 MS.gene89606:CDS 45.0%
AGCATTTCTTCCTTCTCAGG+TGG - chr8.3:27279591-27279610 None:intergenic 45.0%
AGCCCTTACATAATCTCCCT+AGG - chr8.3:27276386-27276405 None:intergenic 45.0%
AGCCTGACGGAATTCATCAA+CGG - chr8.3:27276061-27276080 None:intergenic 45.0%
AGGTGAATTGACGAGAACCA+AGG + chr8.3:27276553-27276572 MS.gene89606:intron 45.0%
ATTCCGTCAGGCTCTTGTAT+TGG + chr8.3:27276068-27276087 MS.gene89606:CDS 45.0%
CACTCCTTGCACATCCAAAA+TGG - chr8.3:27277341-27277360 None:intergenic 45.0%
CATCCAATACAAGAGCCTGA+CGG - chr8.3:27276074-27276093 None:intergenic 45.0%
CCCAACCTCTCAATGTAGAT+TGG - chr8.3:27277175-27277194 None:intergenic 45.0%
CGCATGTTCATCATCAATGC+AGG + chr8.3:27277799-27277818 MS.gene89606:CDS 45.0%
CTGTGGCTGATAAAACTGCT+TGG + chr8.3:27279079-27279098 MS.gene89606:CDS 45.0%
CTTCAGTGGAGGAAAGAGTT+TGG + chr8.3:27276942-27276961 MS.gene89606:CDS 45.0%
CTTCTACTTCAGCTGTCAAG+CGG - chr8.3:27279266-27279285 None:intergenic 45.0%
CTTGACAAGATTGACCGTGT+TGG + chr8.3:27275925-27275944 MS.gene89606:CDS 45.0%
CTTTCAAATCATCAGCGTCG+CGG - chr8.3:27276038-27276057 None:intergenic 45.0%
GGAAAGCCAGTCTTCCAAAA+TGG + chr8.3:27278663-27278682 MS.gene89606:intron 45.0%
GGATTCACTTGCCAAACAAG+AGG + chr8.3:27280205-27280224 MS.gene89606:CDS 45.0%
GGTGAATTGACGAGAACCAA+GGG + chr8.3:27276554-27276573 MS.gene89606:intron 45.0%
GGTTATGAGTCCCATCACAA+AGG - chr8.3:27279358-27279377 None:intergenic 45.0%
TAAAACTGCTTGGCAGATGG+TGG + chr8.3:27279089-27279108 MS.gene89606:CDS 45.0%
TAGCAGCGTTATAGCATAGC+AGG + chr8.3:27277424-27277443 MS.gene89606:intron 45.0%
TCCTTGCACATCCAAAATGG+TGG - chr8.3:27277338-27277357 None:intergenic 45.0%
TCGTGAATCTTGCACGAATC+AGG - chr8.3:27279300-27279319 None:intergenic 45.0%
TGAACAGATTCCTTAGGGCA+AGG + chr8.3:27276877-27276896 MS.gene89606:intron 45.0%
TGCTCTCGAGCAAGAACTTA+TGG + chr8.3:27279635-27279654 MS.gene89606:CDS 45.0%
TTCTGATAAGGGTCCATGGA+AGG + chr8.3:27278204-27278223 MS.gene89606:CDS 45.0%
TTGAGCAGAAATGGTAGGGT+TGG - chr8.3:27279493-27279512 None:intergenic 45.0%
TTTGCAGCAATGGTACAAGC+TGG - chr8.3:27277295-27277314 None:intergenic 45.0%
! ACAGATTTTCACCGGCATGA+TGG + chr8.3:27279332-27279351 MS.gene89606:CDS 45.0%
! ACCACCATTTTGGATGTGCA+AGG + chr8.3:27277334-27277353 MS.gene89606:CDS 45.0%
! CATTTTGGATGTGCAAGGAG+TGG + chr8.3:27277339-27277358 MS.gene89606:CDS 45.0%
! GGATTTTTGCGGTGGTCTTT+GGG - chr8.3:27277870-27277889 None:intergenic 45.0%
! GTTGCATGCTTTTGACGAAG+GGG - chr8.3:27279043-27279062 None:intergenic 45.0%
! GTTTCGTGTCATTCTCACCA+TGG - chr8.3:27279379-27279398 None:intergenic 45.0%
! GTTTGGCCTTTGATAGGCTT+TGG + chr8.3:27280181-27280200 MS.gene89606:intron 45.0%
! TCTCACATGGATTTTTGCGG+TGG - chr8.3:27277878-27277897 None:intergenic 45.0%
! TGGATTTTTGCGGTGGTCTT+TGG - chr8.3:27277871-27277890 None:intergenic 45.0%
! TGGTTGGTTCCTTACCTTCT+TGG - chr8.3:27279664-27279683 None:intergenic 45.0%
! TGTGACTTGCAACAACTTGG+TGG - chr8.3:27277209-27277228 None:intergenic 45.0%
! TGTGATGGGACTCATAACCA+TGG + chr8.3:27279359-27279378 MS.gene89606:CDS 45.0%
!! CAAGCAGTTTTATCAGCCAC+AGG - chr8.3:27279081-27279100 None:intergenic 45.0%
!! CTAGCGGTTAGTTTGTTAGG+GGG - chr8.3:27276607-27276626 None:intergenic 45.0%
!! GCTAGCGGTTAGTTTGTTAG+GGG - chr8.3:27276608-27276627 None:intergenic 45.0%
AACCAAGGGTTTGATCACCG+CGG + chr8.3:27276568-27276587 MS.gene89606:intron 50.0%
ACACGCCTTCAGAAGATCGA+CGG + chr8.3:27277623-27277642 MS.gene89606:CDS 50.0%
ACTTGTACCTGCGCAGATCA+AGG + chr8.3:27278169-27278188 MS.gene89606:CDS 50.0%
AGGCTGCATGCGTTCTGATA+AGG + chr8.3:27278192-27278211 MS.gene89606:CDS 50.0%
ATTCCCTCACAAGGAGGAGT+AGG + chr8.3:27275971-27275990 MS.gene89606:CDS 50.0%
CATCACAAAGGCCATCATGC+CGG - chr8.3:27279346-27279365 None:intergenic 50.0%
GAGTAGGCGTAGCAGTAGTA+AGG + chr8.3:27275987-27276006 MS.gene89606:CDS 50.0%
GGCATGATGGCCTTTGTGAT+GGG + chr8.3:27279345-27279364 MS.gene89606:CDS 50.0%
GGCTGCATGCGTTCTGATAA+GGG + chr8.3:27278193-27278212 MS.gene89606:CDS 50.0%
TATGAAGCGCATGGCTGAGT+TGG + chr8.3:27279527-27279546 MS.gene89606:CDS 50.0%
TGACACGAAACATGCCGAAG+AGG + chr8.3:27279388-27279407 MS.gene89606:CDS 50.0%
TGCGTTCTGATAAGGGTCCA+TGG + chr8.3:27278200-27278219 MS.gene89606:CDS 50.0%
TGTCACCGTCGATCTTCTGA+AGG - chr8.3:27277631-27277650 None:intergenic 50.0%
TGTGGTCTGACATGCTTCAG+TGG + chr8.3:27276928-27276947 MS.gene89606:CDS 50.0%
TTGGCATCAGTGAGCCTCTT+CGG - chr8.3:27279405-27279424 None:intergenic 50.0%
! AGCCGTTGATGAATTCCGTC+AGG + chr8.3:27276056-27276075 MS.gene89606:CDS 50.0%
! CTATGAGGATTTGGTCCCTG+TGG + chr8.3:27279062-27279081 MS.gene89606:CDS 50.0%
! TGGCCTTTGATAGGCTTTGG+AGG + chr8.3:27280184-27280203 MS.gene89606:intron 50.0%
!! CGGTTAGTTTGTTAGGGGGA+AGG - chr8.3:27276603-27276622 None:intergenic 50.0%
!! CTGCCTCCATTTTGGAAGAC+TGG - chr8.3:27278672-27278691 None:intergenic 50.0%
AACCGCGGTGATCAAACCCT+TGG - chr8.3:27276573-27276592 None:intergenic 55.0%
AAGGCGTGTGATAAGCTCCC+TGG - chr8.3:27277612-27277631 None:intergenic 55.0%
ACGCCTACTCCTCCTTGTGA+GGG - chr8.3:27275977-27275996 None:intergenic 55.0%
CACTTGCATGCCACCTGAGA+AGG + chr8.3:27279578-27279597 MS.gene89606:CDS 55.0%
CGGCATGATGGCCTTTGTGA+TGG + chr8.3:27279344-27279363 MS.gene89606:CDS 55.0%
CTTCTCAGGTGGCATGCAAG+TGG - chr8.3:27279580-27279599 None:intergenic 55.0%
GGGGAAGGATCTGTTAACCG+CGG - chr8.3:27276588-27276607 None:intergenic 55.0%
GGTCTGACATGCTTCAGTGG+AGG + chr8.3:27276931-27276950 MS.gene89606:CDS 55.0%
TACGCCTACTCCTCCTTGTG+AGG - chr8.3:27275978-27275997 None:intergenic 55.0%
TGAGGGATTCCCTCACAAGG+AGG + chr8.3:27275965-27275984 MS.gene89606:CDS 55.0%
TGCTGAGGGATTCCCTCACA+AGG + chr8.3:27275962-27275981 MS.gene89606:CDS 55.0%
TGTACCTGCGCAGATCAAGG+AGG + chr8.3:27278172-27278191 MS.gene89606:CDS 55.0%
TTGCGGTGGTCTTTGGGTCA+AGG - chr8.3:27277864-27277883 None:intergenic 55.0%
GCAGCCTCCTTGATCTGCGC+AGG - chr8.3:27278179-27278198 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 27275805 27280405 27275805 ID=MS.gene89606
chr8.3 mRNA 27275805 27280405 27275805 ID=MS.gene89606.t1;Parent=MS.gene89606
chr8.3 exon 27275805 27275835 27275805 ID=MS.gene89606.t1.exon1;Parent=MS.gene89606.t1
chr8.3 CDS 27275805 27275835 27275805 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27275923 27276136 27275923 ID=MS.gene89606.t1.exon2;Parent=MS.gene89606.t1
chr8.3 CDS 27275923 27276136 27275923 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27276884 27276983 27276884 ID=MS.gene89606.t1.exon3;Parent=MS.gene89606.t1
chr8.3 CDS 27276884 27276983 27276884 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27277094 27277360 27277094 ID=MS.gene89606.t1.exon4;Parent=MS.gene89606.t1
chr8.3 CDS 27277094 27277360 27277094 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27277584 27277661 27277584 ID=MS.gene89606.t1.exon5;Parent=MS.gene89606.t1
chr8.3 CDS 27277584 27277661 27277584 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27277790 27277891 27277790 ID=MS.gene89606.t1.exon6;Parent=MS.gene89606.t1
chr8.3 CDS 27277790 27277891 27277790 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27277984 27278033 27277984 ID=MS.gene89606.t1.exon7;Parent=MS.gene89606.t1
chr8.3 CDS 27277984 27278033 27277984 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27278144 27278243 27278144 ID=MS.gene89606.t1.exon8;Parent=MS.gene89606.t1
chr8.3 CDS 27278144 27278243 27278144 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27278483 27278554 27278483 ID=MS.gene89606.t1.exon9;Parent=MS.gene89606.t1
chr8.3 CDS 27278483 27278554 27278483 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27278664 27278726 27278664 ID=MS.gene89606.t1.exon10;Parent=MS.gene89606.t1
chr8.3 CDS 27278664 27278726 27278664 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27279039 27279141 27279039 ID=MS.gene89606.t1.exon11;Parent=MS.gene89606.t1
chr8.3 CDS 27279039 27279141 27279039 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27279274 27279668 27279274 ID=MS.gene89606.t1.exon12;Parent=MS.gene89606.t1
chr8.3 CDS 27279274 27279668 27279274 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27280197 27280271 27280197 ID=MS.gene89606.t1.exon13;Parent=MS.gene89606.t1
chr8.3 CDS 27280197 27280271 27280197 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
chr8.3 exon 27280391 27280405 27280391 ID=MS.gene89606.t1.exon14;Parent=MS.gene89606.t1
chr8.3 CDS 27280391 27280405 27280391 ID=cds.MS.gene89606.t1;Parent=MS.gene89606.t1
Gene Sequence

>MS.gene89606

ATGTCTATGTCTGATATTCAATCTCCCAAAGGTTTCATCTCAATCCATATCTCTTTCTCAAAAAACATGCCTCTTAACAAAATCTTTATATTGTATTCATTGTTTGAATATATTGCAGCTCTTGACAAGATTGACCGTGTTGGATCGTTGAAAAAGATGCTGAGGGATTCCCTCACAAGGAGGAGTAGGCGTAGCAGTAGTAAGGTTATGTCAGTTGAAATCGAGGATATCCGCGACGCTGATGATTTGAAAGCCGTTGATGAATTCCGTCAGGCTCTTGTATTGGATGAATTGCTCCCTGAGAAGCATGATGACTATCATATGCTGCTCAGGTCATTTCACTTTTTTTTTTGCTCTCTTTGAAACTGATTATATGTTATCATACCAATGTGCTACTGATTATTTGTTAATAAGTTGAAAATGGTAGAGGTTATTCATCTTTAAGAAATGCTAGCTAAATATTTTCCCTAATATTTTTTGGTACCGCATGTATTTGAGTGTCTCATCAAATAAGGTCAGACACTATTTTAAGATGTGTTTGGTTAAACAGCTTAATTAGGCATTTGTTAGTAAGTTGTCCTAGGGAGATTATGTAAGGGCTTATCTATAAGCTAACCTAAAGGATATTGAAACAGGCTCAAAACATGTGATATCGTGAGTTATTTTTATTAAGTATACATAAACACTGATACGGATGTTTGATTTAATCCTCAAAGATGTAGTCTAGCCATATGAAATAGGACACTGAAGGTGAATTGACGAGAACCAAGGGTTTGATCACCGCGGTTAACAGATCCTTCCCCCTAACAAACTAACCGCTAGCATTTTCTCATGAAAACAAATTAAAATAGATATTTGTGTAAGGAAATGAGACTAAATATGTTCTTTCAACTTCCCTTAACAAGGAGTAAGACAACATAATTTAAAGAAACCTATGTAGATATTGCTCAATAATACAGTGTATGTTAACAAAGGGAAGCATTTTGTGCATGAGTAATAAGGATAACCAAGTAAACCTGCTTGTTCAAAAGAAAATCTATAAGAATATTCTGATATGTCTATTCTTTTTTTCTGAACAGATTCCTTAGGGCAAGGAAATTTGAAATTGATAAATCAAAGCAAATGTGGTCTGACATGCTTCAGTGGAGGAAAGAGTTTGGAACTGATACCATTGTTGAGGTATATATATATGTTCATAAATAATGTTTTCCACAAGACTTAAGGGGATTCAATCCCCAGTTTTTTTTTTCTTCATATATCTATACTTATTTTTGTGCCTTTTATTCTAGGATTTTGAATTCGAGGAACTTGAGGAAGTGTTGCAATATTATCCTCATGGAAATCATGGAGTAGATAAAGAAGGAAGACCAATCTACATTGAGAGGTTGGGACAAGTTGATGCCACCAAGTTGTTGCAAGTCACAACAATGGATCGATATATCAAATACCATGTCAAGGAATTTGAGAGAACATTTGATCTCAAGTTTCCAGCTTGTACCATTGCTGCAAAGAAACACATAGATCAAAGCACCACCATTTTGGATGTGCAAGGAGTGGTATGCAGATATGATATTGATTATTTCTATAAGCCAAGCAGCAGTGTTGTTAAATAGCGGCTATAGCAGCGTTATAGCATAGCAGGATTTGAACAAATTGCTATAGTTCTGCGTTATGCAATTTATTACAAAGTATTGTCAAATAGTTACTATAGCGGTGCTATAGCAATGTCATGTAGTGGAATTTGAACAAAATGCTTAAAATATTGTTTTAATGTTACAGGGGCTTAAGAACTTCAACAAACAAGCCAGGGAGCTTATCACACGCCTTCAGAAGATCGACGGTGACAATTATCCTGAAGTATGTATTTTTATCTAATTTGCTAATTATGATTTCAAAATTTTTTTTGTTGAAATTTTTTTTATGCAAATAAATATTGTGGATTACTACCGAGTTGTAATATCATAAAATTGCTTGATTCACTGCAGACCTTGAATCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGAATGTTGTGGAACACTGTTAAATCTTTCCTTGACCCAAAGACCACCGCAAAAATCCATGTGAGAAGATACATAGATCACATCTTAATAAGTTTTGCTTGTATTTCAAGAAATGGAATTTTGTTTATCTAATTGAACTTATAATTCATCAGGTTCTTGGCAACAAGTACCAAAGCAAATTGCTTGAAATAATTGATGCAAGGTGAATATAATTTATAACATCAAAGTACTTGATTTCCTTCATTTCATAACTATTTTCAATTATTTTCCTATTCCACACAACTTTCATGTTCATTTGTTTTGCTTTGCCAGTGAATTGCCAGAGTTTTTAGGAGGTACTTGTACCTGCGCAGATCAAGGAGGCTGCATGCGTTCTGATAAGGGTCCATGGAAGGATCCAGAAATAATTAGGGTGAGCTTGCAAACCATCTTTTTATTTTGCGATGATTCTCACCCCGCTCAGCTACTAAAAAAACTCACATATTTTCAAAAGTGTACTTCCGGATACAATAAAATATCGGGAAGTTTACTTCTAGAGGACACAAAAGTAGTGTATTTCCAGATGTGTACATCTGAAATTATGTTGGAGGTGGAGAAAATTTTCCCCTTTATTGATTTCCGTTGATAATGGTGTTATATATGAACTTGCAGATGGTTCAGAATGGTGAACACAAAACTTCAAGGAAAATTGAGGCTCCTATCGTTGAAGAGAAAACTTCTGAGGTGTGACATCTTATTTTGAGTTATTTGTTCAAACATTTGGCCTTTTATCTGTTTTTTTTTTAATACTTTTCACTTCTCAAAATCAATTTCTTATTTTTTGTATGTGTAGGAAAGCCAGTCTTCCAAAATGGAGGCAGTTTTCACTGCACAATTGTCTACTGTCTATGCCAAGGTATATTAGTATATACTCCGTAACAAAACATACGAAAAAAGTAATACATGTATTTGGTCTAAATTTAGACATATACATGTACTTGTTGTAATGAATAAAAATATTATTCCAATAAAAACTATATGTTATATTGATGTGAGTATCTTCTTTTGGTATTGTGTGCAATTTATTTTGATAGTTTTGTTTAATGTGGCCATTGAATCATAAAGAAGACAACACATTTTGGATGTTTCATTTTTATATACCATTCCTATGTATTGCATGTGTTTCTTAGCTTACTCTTGAGTACAAAATTGTGGATAAACATAACAGGCCCCTTCGTCAAAAGCATGCAACTATGAGGATTTGGTCCCTGTGGCTGATAAAACTGCTTGGCAGATGGTGGAAAAAACCAAGTCATTTGCAGTACCAAAAGGTACATATATGTAGATATGCATGTCTTTCTTTGTTAGTTAACTCTATTTTACATTATTCTCCTATCTAATATTTTGAACATTACTTCATTTTGTGAACTGAACTGTATGTGTTTTTGCGATCCGCTTGACAGCTGAAGTAGAAGCTTTGACGGTGCCTGATTCGTGCAAGATTCACGAAAAAGTGAACTCACAGATTTTCACCGGCATGATGGCCTTTGTGATGGGACTCATAACCATGGTGAGAATGACACGAAACATGCCGAAGAGGCTCACTGATGCCAACTTCTACTCAAATTCTGCTTACTCTGGTGGTGACTTTAAAAGTGAAGACTCTAGTGACCATTTGACCAACCCTACCATTTCTGCTCAAGAGTTTATGACTGTTATGAAGCGCATGGCTGAGTTGGAAGATAAAATGGGCAACATGAACACAACCACTTGCATGCCACCTGAGAAGGAAGAAATGCTTAATGCTGCTATAAGTCGCGCTGATGCTCTCGAGCAAGAACTTATGGCAACCAAGAAGGTAAGGAACCAACCATTAACTTCTAATATGATTTTTAAGATCCTTTATCTCTTATTGCACATAGGTTTTAAATTGATGTTACGGTCGCTCTAATATTGAATCTTTGATATTGCAAAAAAATATAGACAAATGCAGTTAATGTGATCGCAATTTTAGTCGCCATGCAATTGCAAAGACTTCAAAATTCTTTAAGTTGAGACCACAATTGTTATGCCACAATTTAAAAGATCCAGATTGCGTGCTGTAAAAAAAAACATGTGTTTACACGTAGTAAACGATCACGGTCATTAATTTGAGATCGGACAAATCAAATTACACAATAACAAAATCAACTATAAACAATCTCAGTCGTTAATTTGAGATCAGATAGTCATATTAAAATATGATTGGCGTGGTAAATGCACCAAATCCAAATTTAAAACTATGATTGCACTAAATTATACAATTTTTTTACTATATCATAAAAATAATGTTCAAATATGAAGTGCCATTTTGTTAGTATATATAATAATGTTTGGCCTTTGATAGGCTTTGGAGGATTCACTTGCCAAACAAGAGGAACTTTCAGCTTACATTGAGAAAAAGAAAAAGAAGAAGAAGTTGGTACGTATACTATGCATACTCATATTAATTAATAAACATTGACTTAGCTTAATTATAGTAGTAATTGTTTATTTTATTTAATTTTGTTTGATATATTTTGTATTTTTTTTTTAATGCAGTTTCAATGGGCATGA

Protein sequence

>MS.gene89606.t1

MSMSDIQSPKALDKIDRVGSLKKMLRDSLTRRSRRSSSKVMSVEIEDIRDADDLKAVDEFRQALVLDELLPEKHDDYHMLLRFLRARKFEIDKSKQMWSDMLQWRKEFGTDTIVEDFEFEELEEVLQYYPHGNHGVDKEGRPIYIERLGQVDATKLLQVTTMDRYIKYHVKEFERTFDLKFPACTIAAKKHIDQSTTILDVQGVGLKNFNKQARELITRLQKIDGDNYPETLNRMFIINAGSGFRMLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADQGGCMRSDKGPWKDPEIIRMVQNGEHKTSRKIEAPIVEEKTSEESQSSKMEAVFTAQLSTVYAKAPSSKACNYEDLVPVADKTAWQMVEKTKSFAVPKAEVEALTVPDSCKIHEKVNSQIFTGMMAFVMGLITMVRMTRNMPKRLTDANFYSNSAYSGGDFKSEDSSDHLTNPTISAQEFMTVMKRMAELEDKMGNMNTTTCMPPEKEEMLNAAISRADALEQELMATKKALEDSLAKQEELSAYIEKKKKKKKLFQWA