Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89849.t1 | XP_003611940.1 | 97.5 | 604 | 13 | 1 | 7 | 610 | 54 | 655 | 0.00E+00 | 1199.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89849.t1 | F4JQH3 | 69.5 | 606 | 167 | 3 | 7 | 610 | 54 | 643 | 1.1e-253 | 877.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89849.t1 | G7KC66 | 97.5 | 604 | 13 | 1 | 7 | 610 | 54 | 655 | 0.0e+00 | 1199.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene89849 | MS.gene035805 | PPI |
| MS.gene89849 | MS.gene050876 | PPI |
| MS.gene89849 | MS.gene064542 | PPI |
| MS.gene89849 | MS.gene29338 | PPI |
| MS.gene89849 | MS.gene066565 | PPI |
| MS.gene89849 | MS.gene072472 | PPI |
| MS.gene89849 | MS.gene73119 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89849.t1 | MTR_5g019600 | 97.517 | 604 | 13 | 1 | 7 | 610 | 54 | 655 | 0.0 | 1224 |
| MS.gene89849.t1 | MTR_5g019600 | 96.560 | 407 | 12 | 1 | 7 | 413 | 54 | 458 | 0.0 | 805 |
| MS.gene89849.t1 | MTR_7g113480 | 42.787 | 610 | 304 | 8 | 8 | 608 | 135 | 708 | 2.19e-161 | 479 |
| MS.gene89849.t1 | MTR_7g113480 | 42.984 | 563 | 276 | 8 | 8 | 561 | 135 | 661 | 6.61e-147 | 440 |
| MS.gene89849.t1 | MTR_7g113480 | 42.133 | 572 | 288 | 8 | 44 | 608 | 9 | 544 | 2.38e-146 | 434 |
| MS.gene89849.t1 | MTR_7g113480 | 42.190 | 557 | 279 | 8 | 59 | 608 | 11 | 531 | 1.00e-140 | 420 |
| MS.gene89849.t1 | MTR_7g113480 | 43.609 | 532 | 255 | 9 | 8 | 530 | 135 | 630 | 2.13e-137 | 416 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89849.t1 | AT4G36760 | 69.472 | 606 | 167 | 3 | 7 | 610 | 54 | 643 | 0.0 | 895 |
| MS.gene89849.t1 | AT4G36760 | 69.486 | 603 | 166 | 3 | 7 | 607 | 54 | 640 | 0.0 | 891 |
| MS.gene89849.t1 | AT4G36760 | 69.256 | 605 | 168 | 3 | 7 | 609 | 54 | 642 | 0.0 | 890 |
| MS.gene89849.t1 | AT3G05350 | 43.393 | 613 | 299 | 11 | 8 | 609 | 133 | 708 | 1.32e-165 | 489 |
Find 136 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCAAGTGTAGAGATATTT+TGG | 0.152849 | 5.3:-11231969 | MS.gene89849:CDS |
| TTTACCATTTACACTCTTAT+TGG | 0.154825 | 5.3:+11235363 | None:intergenic |
| GGCTCTTCCAAAAGCTTTAA+AGG | 0.165533 | 5.3:-11235227 | MS.gene89849:intron |
| GCTGATACAAAATTTAATTT+TGG | 0.178763 | 5.3:-11232311 | MS.gene89849:CDS |
| GAGCGACCTGCAAACTTTAA+TGG | 0.207735 | 5.3:+11236303 | None:intergenic |
| TCTTGTTTGGCTGGATAATA+AGG | 0.224940 | 5.3:-11234826 | MS.gene89849:intron |
| TCAATCAACTTTGTTTGATA+TGG | 0.227519 | 5.3:+11232040 | None:intergenic |
| AAAATTTGGTTGATGAAGTA+TGG | 0.246379 | 5.3:-11236368 | MS.gene89849:CDS |
| ACCCCAATTGCTGCATCTTT+TGG | 0.266572 | 5.3:+11236477 | None:intergenic |
| GATACAACCTTTAAAGCTTT+TGG | 0.273131 | 5.3:+11235220 | None:intergenic |
| TACTATGAGGATGGAGCATT+TGG | 0.273192 | 5.3:-11232368 | MS.gene89849:CDS |
| GTGCAGATGCAGGATATTTA+TGG | 0.289913 | 5.3:-11234645 | MS.gene89849:intron |
| CCAAAGCAATATGACCCTTT+AGG | 0.294717 | 5.3:+11232978 | None:intergenic |
| CCAGGTTAAAACTCATTTAG+AGG | 0.309613 | 5.3:-11235527 | MS.gene89849:intron |
| GAAACCAATAAGAGTGTAAA+TGG | 0.328917 | 5.3:-11235367 | MS.gene89849:CDS |
| CACATAAACGAAGGCAGAAT+TGG | 0.330665 | 5.3:+11235978 | None:intergenic |
| ATTACACGAACAGTTCATTT+CGG | 0.335748 | 5.3:-11233136 | MS.gene89849:CDS |
| TTACACGAACAGTTCATTTC+GGG | 0.342191 | 5.3:-11233135 | MS.gene89849:CDS |
| CTTCTGGATTTAGAAGGTTC+AGG | 0.349912 | 5.3:+11232017 | None:intergenic |
| CGAATTCCTTTGTGGAACTA+TGG | 0.353081 | 5.3:-11232790 | MS.gene89849:CDS |
| TGCTGCAAGACAACTGCATC+AGG | 0.354118 | 5.3:+11235259 | None:intergenic |
| CTAAAGGGTCATATTGCTTT+GGG | 0.355941 | 5.3:-11232977 | MS.gene89849:CDS |
| GTAATACCATTTGTTCCATT+AGG | 0.358872 | 5.3:+11232941 | None:intergenic |
| CTTGTAGAACCCAGTGGAAT+TGG | 0.359955 | 5.3:-11234898 | MS.gene89849:intron |
| ATGGAACTGGTCACGGTATT+GGG | 0.360466 | 5.3:-11232753 | MS.gene89849:CDS |
| CTGTTGTGCAATATCTTGTT+TGG | 0.362186 | 5.3:-11234839 | MS.gene89849:CDS |
| AAAAGAGTAGCAACCTCATA+TGG | 0.364377 | 5.3:-11235327 | MS.gene89849:CDS |
| AAGACCCTGCTGTAGATATC+TGG | 0.368193 | 5.3:-11237029 | MS.gene89849:CDS |
| GTACAACCATTAAAGTTTGC+AGG | 0.370964 | 5.3:-11236309 | MS.gene89849:CDS |
| CCTAAAGGGTCATATTGCTT+TGG | 0.371842 | 5.3:-11232978 | MS.gene89849:CDS |
| CAGGATATTTATGGAGCATC+TGG | 0.378525 | 5.3:-11234636 | MS.gene89849:CDS |
| GGAAATGCTAGGTTTCCTAA+TGG | 0.379128 | 5.3:-11232956 | MS.gene89849:CDS |
| TTGCCAAAAGATGCAGCAAT+TGG | 0.381447 | 5.3:-11236480 | MS.gene89849:CDS |
| TTCTTTCTCGAATTCCTTTG+TGG | 0.385407 | 5.3:-11232798 | MS.gene89849:CDS |
| CTATACCTTCATGGACATTC+AGG | 0.387469 | 5.3:+11232725 | None:intergenic |
| CATGGAACTGGTCACGGTAT+TGG | 0.388080 | 5.3:-11232754 | MS.gene89849:CDS |
| TAATGAATAATAGCTGCGTT+TGG | 0.393082 | 5.3:+11233383 | None:intergenic |
| ATCTCTACACTTGGAATGAT+AGG | 0.403975 | 5.3:+11231976 | None:intergenic |
| TGGAGCATTTGGGATAAGAT+TGG | 0.408521 | 5.3:-11232357 | MS.gene89849:CDS |
| CAATTCTGCCTTCGTTTATG+TGG | 0.417617 | 5.3:-11235977 | MS.gene89849:CDS |
| TGCCAAAAGATGCAGCAATT+GGG | 0.422496 | 5.3:-11236479 | MS.gene89849:CDS |
| GTTAAGAAAGGCCCATGTTC+GGG | 0.423445 | 5.3:-11234871 | MS.gene89849:CDS |
| ATAGTTCAACTATACCTTCA+TGG | 0.424811 | 5.3:+11232716 | None:intergenic |
| AACTGCATCAGGGTTCAGTT+TGG | 0.431252 | 5.3:+11235270 | None:intergenic |
| CAATTGATACTGCTCAAAGA+TGG | 0.432499 | 5.3:-11236437 | MS.gene89849:CDS |
| AGTCACCTCAGTCAATTTCA+AGG | 0.442633 | 5.3:+11233992 | None:intergenic |
| TGTGCAATATCTTGTTTGGC+TGG | 0.445934 | 5.3:-11234835 | MS.gene89849:CDS |
| CTTAACCCATCCAATTCCAC+TGG | 0.446232 | 5.3:+11234888 | None:intergenic |
| TACACTCTTATTGGTTTCAC+CGG | 0.447047 | 5.3:+11235372 | None:intergenic |
| GAACTTGGTGCAGGTCCTAA+AGG | 0.448968 | 5.3:-11232993 | MS.gene89849:intron |
| AATGAATAATAGCTGCGTTT+GGG | 0.451012 | 5.3:+11233384 | None:intergenic |
| AAAACTCATTTAGAGGAGAA+TGG | 0.451265 | 5.3:-11235520 | MS.gene89849:CDS |
| CAAAGGATGAAGCACTGCTT+TGG | 0.456478 | 5.3:-11237122 | MS.gene89849:CDS |
| TCGGCACATGTTTCTGCCTC+TGG | 0.458639 | 5.3:+11233356 | None:intergenic |
| AACAACAACTTAGTGATAAG+TGG | 0.460533 | 5.3:-11237071 | MS.gene89849:CDS |
| ATAGCAAATGCGTGAACAAC+AGG | 0.460986 | 5.3:+11236009 | None:intergenic |
| CAGCAATTGGGGTTGACCCT+TGG | 0.465455 | 5.3:-11236467 | MS.gene89849:CDS |
| GGTTAAGAAAGGCCCATGTT+CGG | 0.468542 | 5.3:-11234872 | MS.gene89849:CDS |
| AGGTTTCCTAATGGAACAAA+TGG | 0.472207 | 5.3:-11232947 | MS.gene89849:intron |
| CAGCCGCACCATCCCGAACA+TGG | 0.478470 | 5.3:+11234859 | None:intergenic |
| CTTGATTATCGACATGGAAC+TGG | 0.480163 | 5.3:-11232766 | MS.gene89849:CDS |
| AACTTGGTGCAGGTCCTAAA+GGG | 0.480493 | 5.3:-11232992 | MS.gene89849:intron |
| TTCCCTACTATTTCCTCAGT+AGG | 0.480887 | 5.3:-11233407 | MS.gene89849:CDS |
| TGTCTTGCAGCAATCACCTC+TGG | 0.487228 | 5.3:-11235248 | MS.gene89849:CDS |
| TTCCAGAAAACAGCAAAAGT+TGG | 0.487964 | 5.3:-11236403 | MS.gene89849:CDS |
| GTAAATGGTAAACATCAAAC+AGG | 0.490262 | 5.3:-11235352 | MS.gene89849:CDS |
| GGGCCTACTGAGGAAATAGT+AGG | 0.492174 | 5.3:+11233404 | None:intergenic |
| GTCATCCAATACAGGTTGCT+TGG | 0.492637 | 5.3:-11236068 | MS.gene89849:intron |
| ACTATGAGGATGGAGCATTT+GGG | 0.498108 | 5.3:-11232367 | MS.gene89849:CDS |
| AGAGCATAACAGCATGAAGC+TGG | 0.501145 | 5.3:+11235298 | None:intergenic |
| TAGAACCCAGTGGAATTGGA+TGG | 0.510762 | 5.3:-11234894 | MS.gene89849:CDS |
| AACACAGCTCACACAGCTAC+AGG | 0.512117 | 5.3:+11231896 | None:intergenic |
| AATTGATACTGCTCAAAGAT+GGG | 0.512479 | 5.3:-11236436 | MS.gene89849:CDS |
| AACTTCAGCTAGACTAGCCT+TGG | 0.515371 | 5.3:+11235417 | None:intergenic |
| CAGCATTAATTTCTGCTGGT+GGG | 0.521307 | 5.3:+11236337 | None:intergenic |
| TTTAGAACCTGGTTACTATG+AGG | 0.522358 | 5.3:-11232381 | MS.gene89849:intron |
| AAGCTGGATCAGCCCATATG+AGG | 0.522455 | 5.3:+11235314 | None:intergenic |
| GCCATCCAGATATCTACAGC+AGG | 0.525920 | 5.3:+11237024 | None:intergenic |
| GGCCCATGTTCGGGATGGTG+CGG | 0.526551 | 5.3:-11234862 | MS.gene89849:CDS |
| ACGGCAGCATTAATTTCTGC+TGG | 0.531402 | 5.3:+11236333 | None:intergenic |
| GCAGCATTAATTTCTGCTGG+TGG | 0.534061 | 5.3:+11236336 | None:intergenic |
| GCTTGGCTGTATAATATTCG+TGG | 0.537072 | 5.3:-11236051 | MS.gene89849:CDS |
| AAGCAATCTGAAAACTTCTC+CGG | 0.538312 | 5.3:-11235391 | MS.gene89849:CDS |
| GCCAAAAGATGCAGCAATTG+GGG | 0.538426 | 5.3:-11236478 | MS.gene89849:CDS |
| GAACCTGGTTACTATGAGGA+TGG | 0.541055 | 5.3:-11232377 | MS.gene89849:CDS |
| TTTGAGAAATAAGCTTGCAC+AGG | 0.543705 | 5.3:-11236259 | MS.gene89849:CDS |
| CAAGCGAAAGGTGTCTATTG+AGG | 0.547410 | 5.3:-11235953 | MS.gene89849:intron |
| AGCCAAAATATCTCTACACT+TGG | 0.549514 | 5.3:+11231967 | None:intergenic |
| GAAGCACTGCTTTGGACCGA+TGG | 0.555358 | 5.3:-11237114 | MS.gene89849:CDS |
| GGAATTGGATGGGTTAAGAA+AGG | 0.557161 | 5.3:-11234883 | MS.gene89849:CDS |
| TTCGAGAAAGAATATCAAGT+TGG | 0.559945 | 5.3:+11232809 | None:intergenic |
| CGTTTATGTGGACAAGCGAA+AGG | 0.561686 | 5.3:-11235965 | MS.gene89849:CDS |
| AAAGAGTAGCAACCTCATAT+GGG | 0.572636 | 5.3:-11235326 | MS.gene89849:CDS |
| ATTCTGAAACTGATTAAATG+AGG | 0.576925 | 5.3:+11232593 | None:intergenic |
| AGCCGCACCATCCCGAACAT+GGG | 0.579490 | 5.3:+11234860 | None:intergenic |
| TATCGTTCGAGCATATTACC+TGG | 0.581427 | 5.3:-11232274 | MS.gene89849:CDS |
| ATATTGCTTTGGGAAATGCT+AGG | 0.581518 | 5.3:-11232967 | MS.gene89849:CDS |
| TATCGACATGGAACTGGTCA+CGG | 0.586824 | 5.3:-11232760 | MS.gene89849:CDS |
| TGATTCCGTGTCTACTGCCA+AGG | 0.589506 | 5.3:-11235434 | MS.gene89849:CDS |
| GGAATTTCGAGCATCAAAAG+AGG | 0.590019 | 5.3:-11233952 | MS.gene89849:intron |
| AGAACCCAGTGGAATTGGAT+GGG | 0.592752 | 5.3:-11234893 | MS.gene89849:CDS |
| ACTAGCCTTGGCAGTAGACA+CGG | 0.596955 | 5.3:+11235429 | None:intergenic |
| GGCCTACTGAGGAAATAGTA+GGG | 0.603464 | 5.3:+11233405 | None:intergenic |
| TAATATTCGTGGAAAAGATG+TGG | 0.605682 | 5.3:-11236040 | MS.gene89849:CDS |
| GACTGTAAGTGACAAGCTTG+AGG | 0.605740 | 5.3:-11233973 | MS.gene89849:CDS |
| TCACACAGCTACAGGTTCTG+TGG | 0.607304 | 5.3:+11231904 | None:intergenic |
| CTAACCGTCGGTAACAGTCA+TGG | 0.608781 | 5.3:+11232547 | None:intergenic |
| CCCTGCTGTAGATATCTGGA+TGG | 0.608782 | 5.3:-11237025 | MS.gene89849:CDS |
| GTGTGTTTGTAGTATCTGGA+TGG | 0.612730 | 5.3:-11233169 | MS.gene89849:intron |
| CTGCAGAAAATAACGTCCAT+CGG | 0.614375 | 5.3:+11237098 | None:intergenic |
| TTAACCCATCCAATTCCACT+GGG | 0.614706 | 5.3:+11234889 | None:intergenic |
| ATCGTTCGAGCATATTACCT+GGG | 0.623211 | 5.3:-11232273 | MS.gene89849:intron |
| TACAGAAGTAAGCGTAGATG+CGG | 0.623527 | 5.3:-11235479 | MS.gene89849:CDS |
| TATGGTCTTGATTATCGACA+TGG | 0.627608 | 5.3:-11232772 | MS.gene89849:CDS |
| AGGTTTGGCACTCATAACAA+AGG | 0.630909 | 5.3:-11237139 | MS.gene89849:CDS |
| TCCTACCTGAATGTCCATGA+AGG | 0.631448 | 5.3:-11232730 | MS.gene89849:intron |
| GCTCCATCCTCATAGTAACC+AGG | 0.632228 | 5.3:+11232374 | None:intergenic |
| TGGATGAAGCTGAAAATGCA+TGG | 0.635806 | 5.3:-11231937 | MS.gene89849:CDS |
| AGAAAGGCCCATGTTCGGGA+TGG | 0.637022 | 5.3:-11234867 | MS.gene89849:CDS |
| TATTATTCATTATTCTCCAG+AGG | 0.637238 | 5.3:-11233372 | MS.gene89849:CDS |
| TAACAGTGGATGCATTCCAT+AGG | 0.638303 | 5.3:+11237243 | None:intergenic |
| ACAGTCATGGAAGCTTGCAA+TGG | 0.640918 | 5.3:+11232560 | None:intergenic |
| TATCAATTGAAATGCACCAA+GGG | 0.647183 | 5.3:+11236451 | None:intergenic |
| CTTGCACAGGAGCATGCTCG+AGG | 0.658974 | 5.3:-11236246 | MS.gene89849:CDS |
| CCATCCAGATATCTACAGCA+GGG | 0.663537 | 5.3:+11237025 | None:intergenic |
| TCGCTTGTCCACATAAACGA+AGG | 0.666922 | 5.3:+11235969 | None:intergenic |
| GCTGCAAGACAACTGCATCA+GGG | 0.675527 | 5.3:+11235260 | None:intergenic |
| AAACTTTAATGGTTGTACAA+CGG | 0.675692 | 5.3:+11236314 | None:intergenic |
| TCAAGACCATAGTTCCACAA+AGG | 0.676845 | 5.3:+11232784 | None:intergenic |
| GCTTCCATGACTGTTACCGA+CGG | 0.680223 | 5.3:-11232551 | MS.gene89849:intron |
| AGCTGCGTTTGGGCCTACTG+AGG | 0.684660 | 5.3:+11233394 | None:intergenic |
| TTATTGCTTGTAGAACCCAG+TGG | 0.696732 | 5.3:-11234904 | MS.gene89849:intron |
| GAAGTCCTTGAAATTGACTG+AGG | 0.707917 | 5.3:-11233997 | MS.gene89849:CDS |
| ACCTTCATGGACATTCAGGT+AGG | 0.711577 | 5.3:+11232729 | None:intergenic |
| GTATCAATTGAAATGCACCA+AGG | 0.717415 | 5.3:+11236450 | None:intergenic |
| GAATGTGCTTGTTATCAACG+AGG | 0.829617 | 5.3:-11232333 | MS.gene89849:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTATATACATATACAA+GGG | + | chr5.3:11233418-11233437 | None:intergenic | 10.0% |
| !! | TGTATATAATATAGTAAAAA+TGG | - | chr5.3:11233425-11233444 | MS.gene89849:CDS | 10.0% |
| !!! | AAAAAAAAAAAAGCTTTAAA+AGG | + | chr5.3:11233042-11233061 | None:intergenic | 10.0% |
| !! | AAAATTAAAGATAAAACAAG+AGG | - | chr5.3:11232357-11232376 | MS.gene89849:CDS | 15.0% |
| !! | CGATTATACTTATATTTATT+TGG | - | chr5.3:11236718-11236737 | MS.gene89849:intron | 15.0% |
| !! | CTAGTAAAATAAATTGAAAA+TGG | + | chr5.3:11236675-11236694 | None:intergenic | 15.0% |
| !! | CTATATTATATACATATACA+AGG | + | chr5.3:11233419-11233438 | None:intergenic | 15.0% |
| !! | TGTGAAAATTAAGAAAAAAT+TGG | - | chr5.3:11234834-11234853 | MS.gene89849:CDS | 15.0% |
| !!! | AAAATTTATCTTTTTGATTC+TGG | - | chr5.3:11235824-11235843 | MS.gene89849:intron | 15.0% |
| !!! | ATTTTTTCTTAATTTTCACA+AGG | + | chr5.3:11234834-11234853 | None:intergenic | 15.0% |
| !!! | CTGATTTTTTTTTTTTGTAT+CGG | - | chr5.3:11232604-11232623 | MS.gene89849:intron | 15.0% |
| !!! | TGTTCATTTTCTTATTAAAA+TGG | - | chr5.3:11231977-11231996 | MS.gene89849:CDS | 15.0% |
| !!! | TTTATTTGGTTTTTATTCAT+TGG | - | chr5.3:11236732-11236751 | MS.gene89849:intron | 15.0% |
| !!! | TTTATTTTTACCTTTCTTAA+TGG | - | chr5.3:11234987-11235006 | MS.gene89849:intron | 15.0% |
| !! | AAACTGAAGTTTATTTACTT+GGG | - | chr5.3:11233488-11233507 | MS.gene89849:intron | 20.0% |
| !! | AATTGAAAAACAAAACTGTA+AGG | + | chr5.3:11232990-11233009 | None:intergenic | 20.0% |
| !! | ATAGAATCAAAATAAGGAAT+AGG | + | chr5.3:11236463-11236482 | None:intergenic | 20.0% |
| !! | ATTGAAAAACAAAACTGTAA+GGG | + | chr5.3:11232989-11233008 | None:intergenic | 20.0% |
| !! | ATTTACTTAGCTATGATAAT+TGG | - | chr5.3:11236080-11236099 | MS.gene89849:intron | 20.0% |
| !! | CAATACTAAAGACAAAATTT+AGG | - | chr5.3:11232204-11232223 | MS.gene89849:intron | 20.0% |
| !! | CAATTATCAATATACAAAAC+TGG | + | chr5.3:11235952-11235971 | None:intergenic | 20.0% |
| !! | CGAAAAATAGAATCAAAATA+AGG | + | chr5.3:11236469-11236488 | None:intergenic | 20.0% |
| !! | CGAAATTATATGTCAAAATA+GGG | - | chr5.3:11232448-11232467 | MS.gene89849:intron | 20.0% |
| !! | CTATTATTCTTGTATATCTA+AGG | + | chr5.3:11233270-11233289 | None:intergenic | 20.0% |
| !! | CTTAGATATACAAGAATAAT+AGG | - | chr5.3:11233268-11233287 | MS.gene89849:intron | 20.0% |
| !! | GAACTATGATAAAAATTCTT+TGG | - | chr5.3:11233355-11233374 | MS.gene89849:CDS | 20.0% |
| !! | TAAACTGAAGTTTATTTACT+TGG | - | chr5.3:11233487-11233506 | MS.gene89849:intron | 20.0% |
| !! | TATAAATGACATTTGATTGT+TGG | - | chr5.3:11233966-11233985 | MS.gene89849:CDS | 20.0% |
| !! | TATCATAGCTAAGTAAATAA+AGG | + | chr5.3:11236078-11236097 | None:intergenic | 20.0% |
| !! | TCCAAAGATAATATACTTAA+GGG | + | chr5.3:11234111-11234130 | None:intergenic | 20.0% |
| !! | TTAAAAAAATAAAGATCCCA+CGG | + | chr5.3:11236937-11236956 | None:intergenic | 20.0% |
| !! | TTCAATTACATTCATACATA+TGG | - | chr5.3:11234049-11234068 | MS.gene89849:intron | 20.0% |
| !! | TTCATGAAAAGATTTATAGT+GGG | + | chr5.3:11234916-11234935 | None:intergenic | 20.0% |
| !! | TTCCAAAGATAATATACTTA+AGG | + | chr5.3:11234112-11234131 | None:intergenic | 20.0% |
| !! | TTTCATGAAAAGATTTATAG+TGG | + | chr5.3:11234917-11234936 | None:intergenic | 20.0% |
| !!! | AAATTTAATTTTGGCGATAA+AGG | - | chr5.3:11236842-11236861 | MS.gene89849:intron | 20.0% |
| !!! | AATATAAATTTTCAGCTTTC+TGG | + | chr5.3:11235355-11235374 | None:intergenic | 20.0% |
| !!! | ATATAAATTTTCAGCTTTCT+GGG | + | chr5.3:11235354-11235373 | None:intergenic | 20.0% |
| !!! | ATTCTCATTTTGAATTGAAT+TGG | + | chr5.3:11236501-11236520 | None:intergenic | 20.0% |
| !!! | CAATCAAATGTCATTTATAA+AGG | + | chr5.3:11233965-11233984 | None:intergenic | 20.0% |
| !!! | CAGTTTTGTATATTGATAAT+TGG | - | chr5.3:11235950-11235969 | MS.gene89849:intron | 20.0% |
| !!! | CATATTTTATTTTCTTGATG+AGG | - | chr5.3:11234368-11234387 | MS.gene89849:intron | 20.0% |
| !!! | GCTGATACAAAATTTAATTT+TGG | - | chr5.3:11236833-11236852 | MS.gene89849:intron | 20.0% |
| !!! | TCAAAAAGATAAATTTTGTC+TGG | + | chr5.3:11235821-11235840 | None:intergenic | 20.0% |
| !!! | TCTTCAGTGTAAATTTTTTT+GGG | - | chr5.3:11236236-11236255 | MS.gene89849:CDS | 20.0% |
| !!! | TTACAGTTTTGTTTTTCAAT+TGG | - | chr5.3:11232989-11233008 | MS.gene89849:intron | 20.0% |
| ! | AAACTTTAATGGTTGTACAA+CGG | + | chr5.3:11232833-11232852 | None:intergenic | 25.0% |
| ! | AAAGATAAAACAAGAGGATT+TGG | - | chr5.3:11232363-11232382 | MS.gene89849:CDS | 25.0% |
| ! | AATGTTATGTTATAGCATAG+CGG | + | chr5.3:11236995-11237014 | None:intergenic | 25.0% |
| ! | ATTGAACTCACTAAAATATG+AGG | + | chr5.3:11234689-11234708 | None:intergenic | 25.0% |
| ! | CAACAAGAAAGACAAAATTT+AGG | - | chr5.3:11232234-11232253 | MS.gene89849:intron | 25.0% |
| ! | CTAAACAAAAGTTAATACAC+AGG | + | chr5.3:11236907-11236926 | None:intergenic | 25.0% |
| ! | GCGAAATTATATGTCAAAAT+AGG | - | chr5.3:11232447-11232466 | MS.gene89849:intron | 25.0% |
| ! | GTTAAAGATCTTTGTATCTT+CGG | - | chr5.3:11233548-11233567 | MS.gene89849:intron | 25.0% |
| ! | TAAATCCAGAAGAGAAAAAT+TGG | - | chr5.3:11237138-11237157 | MS.gene89849:CDS | 25.0% |
| ! | TATTATTCATTATTCTCCAG+AGG | - | chr5.3:11235772-11235791 | MS.gene89849:intron | 25.0% |
| ! | TATTCATCATGTTAGAGTTT+AGG | + | chr5.3:11234803-11234822 | None:intergenic | 25.0% |
| ! | TCCCTTAAGTATATTATCTT+TGG | - | chr5.3:11234107-11234126 | MS.gene89849:intron | 25.0% |
| ! | TTAAGAAAAAATTGGCAAAC+TGG | - | chr5.3:11234842-11234861 | MS.gene89849:CDS | 25.0% |
| ! | TTCTTATTAAAATGGCATTC+AGG | - | chr5.3:11231985-11232004 | MS.gene89849:CDS | 25.0% |
| ! | TTGAAAAACAAAACTGTAAG+GGG | + | chr5.3:11232988-11233007 | None:intergenic | 25.0% |
| ! | TTTAAAAGGATGAACATTTG+AGG | + | chr5.3:11233028-11233047 | None:intergenic | 25.0% |
| ! | TTTACCATTTACACTCTTAT+TGG | + | chr5.3:11233784-11233803 | None:intergenic | 25.0% |
| !! | ATATTAGCAGAGTATTTCTT+TGG | - | chr5.3:11233526-11233545 | MS.gene89849:intron | 25.0% |
| !! | ATCTTCGGATTGTATTATTT+TGG | - | chr5.3:11233563-11233582 | MS.gene89849:intron | 25.0% |
| !! | ATTACATGAAAGATTTTCCA+AGG | + | chr5.3:11235053-11235072 | None:intergenic | 25.0% |
| !! | ATTAGTGAAACTTACTCTTT+TGG | - | chr5.3:11235907-11235926 | MS.gene89849:intron | 25.0% |
| !! | GTCATTTATAAAGGAGTATA+AGG | + | chr5.3:11233956-11233975 | None:intergenic | 25.0% |
| !! | TCAATCAACTTTGTTTGATA+TGG | + | chr5.3:11237107-11237126 | None:intergenic | 25.0% |
| !! | TGGTTTTTATTCATTGGAAT+TGG | - | chr5.3:11236738-11236757 | MS.gene89849:intron | 25.0% |
| !! | TTACATGAAAGATTTTCCAA+GGG | + | chr5.3:11235052-11235071 | None:intergenic | 25.0% |
| !! | TTTTCAAATGCTTATTTCAG+AGG | + | chr5.3:11235315-11235334 | None:intergenic | 25.0% |
| !! | TTTTCTGTTTTCCTTTGAAT+CGG | - | chr5.3:11234419-11234438 | MS.gene89849:intron | 25.0% |
| !!! | AAAATTTGGTTGATGAAGTA+TGG | - | chr5.3:11232776-11232795 | MS.gene89849:CDS | 25.0% |
| !!! | ATTCTGAAACTGATTAAATG+AGG | + | chr5.3:11236554-11236573 | None:intergenic | 25.0% |
| !!! | CAACCAAATTTTTTGTTGTT+TGG | + | chr5.3:11232768-11232787 | None:intergenic | 25.0% |
| !!! | CATTGGACATTTTGAAATAA+AGG | + | chr5.3:11233294-11233313 | None:intergenic | 25.0% |
| !!! | CTCTTCAGTGTAAATTTTTT+TGG | - | chr5.3:11236235-11236254 | MS.gene89849:CDS | 25.0% |
| !!! | TGAAAATTGTGTTTTTTTCC+AGG | - | chr5.3:11233599-11233618 | MS.gene89849:intron | 25.0% |
| !!! | TTTGTTTAGTTTTTTTCCGT+GGG | - | chr5.3:11236918-11236937 | MS.gene89849:intron | 25.0% |
| !!! | TTTTATCATAGTTCTATTGC+CGG | + | chr5.3:11233349-11233368 | None:intergenic | 25.0% |
| !!! | TTTTGTTTAGTTTTTTTCCG+TGG | - | chr5.3:11236917-11236936 | MS.gene89849:intron | 25.0% |
| AAAACTCATTTAGAGGAGAA+TGG | - | chr5.3:11233624-11233643 | MS.gene89849:intron | 30.0% | |
| AAACAAGGATAAGCTATTTG+TGG | + | chr5.3:11232295-11232314 | None:intergenic | 30.0% | |
| AAATTATACAGCAAGATCTG+AGG | - | chr5.3:11234444-11234463 | MS.gene89849:intron | 30.0% | |
| AACAACAACTTAGTGATAAG+TGG | - | chr5.3:11232073-11232092 | MS.gene89849:intron | 30.0% | |
| AATGAATAATAGCTGCGTTT+GGG | + | chr5.3:11235763-11235782 | None:intergenic | 30.0% | |
| AATTGATACTGCTCAAAGAT+GGG | - | chr5.3:11232708-11232727 | MS.gene89849:intron | 30.0% | |
| ACAATAGAAATGAAGTTGCA+AGG | - | chr5.3:11235579-11235598 | MS.gene89849:intron | 30.0% | |
| ACACAAAGTATGAGATTTAG+AGG | + | chr5.3:11232959-11232978 | None:intergenic | 30.0% | |
| ACCAATGAAAACTTCATTTG+TGG | - | chr5.3:11233458-11233477 | MS.gene89849:intron | 30.0% | |
| AGCTCTACTAATTCATAAGT+GGG | - | chr5.3:11234642-11234661 | MS.gene89849:CDS | 30.0% | |
| ATAGTTCAACTATACCTTCA+TGG | + | chr5.3:11236431-11236450 | None:intergenic | 30.0% | |
| ATTACACGAACAGTTCATTT+CGG | - | chr5.3:11236008-11236027 | MS.gene89849:CDS | 30.0% | |
| ATTTCAGAGGCTAAAATCTT+TGG | + | chr5.3:11235302-11235321 | None:intergenic | 30.0% | |
| CAAAAGTTAATACACAGGTT+AGG | + | chr5.3:11236902-11236921 | None:intergenic | 30.0% | |
| CAATATCTAATACTAACCGT+CGG | + | chr5.3:11236612-11236631 | None:intergenic | 30.0% | |
| CGGTTAATGATGCAAAATAT+TGG | - | chr5.3:11234470-11234489 | MS.gene89849:intron | 30.0% | |
| CTCAAAGAAATATGAATGCA+TGG | - | chr5.3:11235619-11235638 | MS.gene89849:intron | 30.0% | |
| GGTCCAAACAACAAAAAATT+TGG | - | chr5.3:11232762-11232781 | MS.gene89849:CDS | 30.0% | |
| GTAAATGGTAAACATCAAAC+AGG | - | chr5.3:11233792-11233811 | MS.gene89849:intron | 30.0% | |
| GTAATACCATTTGTTCCATT+AGG | + | chr5.3:11236206-11236225 | None:intergenic | 30.0% | |
| TAATATCACAAAACATGTGC+AGG | - | chr5.3:11236527-11236546 | MS.gene89849:intron | 30.0% | |
| TAATATTCGTGGAAAAGATG+TGG | - | chr5.3:11233104-11233123 | MS.gene89849:CDS | 30.0% | |
| TAATGAATAATAGCTGCGTT+TGG | + | chr5.3:11235764-11235783 | None:intergenic | 30.0% | |
| TATACGATGAATTGTGAATC+TGG | - | chr5.3:11231935-11231954 | MS.gene89849:CDS | 30.0% | |
| TATCAATTGAAATGCACCAA+GGG | + | chr5.3:11232696-11232715 | None:intergenic | 30.0% | |
| TCTAGTATGCTTGAGAAAAT+GGG | + | chr5.3:11235517-11235536 | None:intergenic | 30.0% | |
| TGGATAATAAGGTTTGCATT+TGG | - | chr5.3:11234329-11234348 | MS.gene89849:intron | 30.0% | |
| TTAAAACATCCTTGCTTGAT+AGG | - | chr5.3:11234017-11234036 | MS.gene89849:intron | 30.0% | |
| TTCGAGAAAGAATATCAAGT+TGG | + | chr5.3:11236338-11236357 | None:intergenic | 30.0% | |
| TTCTAGTATGCTTGAGAAAA+TGG | + | chr5.3:11235518-11235537 | None:intergenic | 30.0% | |
| TTTACCTTTCTTAATGGTGA+TGG | - | chr5.3:11234993-11235012 | MS.gene89849:intron | 30.0% | |
| TTTGGAAGAGAACTATAGAA+AGG | - | chr5.3:11232381-11232400 | MS.gene89849:intron | 30.0% | |
| ! | AAACAAATTTGGAGCTAATG+AGG | + | chr5.3:11233230-11233249 | None:intergenic | 30.0% |
| ! | ACCACAAATGAAGTTTTCAT+TGG | + | chr5.3:11233462-11233481 | None:intergenic | 30.0% |
| ! | ATCTGTTTTCAGCATTTTAG+AGG | - | chr5.3:11235707-11235726 | MS.gene89849:intron | 30.0% |
| ! | ATTAAAATGGCATTCAGGTT+TGG | - | chr5.3:11231990-11232009 | MS.gene89849:CDS | 30.0% |
| ! | CAAATAGCTTATCCTTGTTT+AGG | - | chr5.3:11232295-11232314 | MS.gene89849:CDS | 30.0% |
| ! | CCTACAAGAATTTTCAAAGA+AGG | + | chr5.3:11236312-11236331 | None:intergenic | 30.0% |
| ! | CCTTCTTTGAAAATTCTTGT+AGG | - | chr5.3:11236309-11236328 | MS.gene89849:CDS | 30.0% |
| ! | GAAACCAATAAGAGTGTAAA+TGG | - | chr5.3:11233777-11233796 | MS.gene89849:intron | 30.0% |
| ! | TCACAGAAGTTTTCAAACTA+TGG | - | chr5.3:11235121-11235140 | MS.gene89849:intron | 30.0% |
| ! | TCAGATCTTGCTGTATAATT+TGG | + | chr5.3:11234445-11234464 | None:intergenic | 30.0% |
| ! | TTCAACCAATTTTTCTCTTC+TGG | + | chr5.3:11237146-11237165 | None:intergenic | 30.0% |
| ! | TTCCAAGTGTAGAGATATTT+TGG | - | chr5.3:11237175-11237194 | MS.gene89849:intron | 30.0% |
| ! | TTTTCTCTTCTGGATTTAGA+AGG | + | chr5.3:11237136-11237155 | None:intergenic | 30.0% |
| !! | CAATAGAATGTTGTTTCTCA+TGG | - | chr5.3:11237046-11237065 | MS.gene89849:CDS | 30.0% |
| !! | TTTTGGCAAGTTCTAGTAAA+TGG | + | chr5.3:11232653-11232672 | None:intergenic | 30.0% |
| !!! | CAGTTTTGTTTTTCAATTGG+AGG | - | chr5.3:11232992-11233011 | MS.gene89849:intron | 30.0% |
| !!! | GATACAACCTTTAAAGCTTT+TGG | + | chr5.3:11233927-11233946 | None:intergenic | 30.0% |
| AAAAGAGTAGCAACCTCATA+TGG | - | chr5.3:11233817-11233836 | MS.gene89849:intron | 35.0% | |
| AAAGAGTAGCAACCTCATAT+GGG | - | chr5.3:11233818-11233837 | MS.gene89849:intron | 35.0% | |
| AAAGCAAGTACAAACAACCT+TGG | + | chr5.3:11232327-11232346 | None:intergenic | 35.0% | |
| AACAGTCGGTGAAACAAATT+TGG | + | chr5.3:11233241-11233260 | None:intergenic | 35.0% | |
| AAGCAATCTGAAAACTTCTC+CGG | - | chr5.3:11233753-11233772 | MS.gene89849:intron | 35.0% | |
| ACAACATTGTCTTCATGTCT+AGG | + | chr5.3:11232516-11232535 | None:intergenic | 35.0% | |
| ACATATGGAAGACTGTATGA+AGG | - | chr5.3:11234064-11234083 | MS.gene89849:intron | 35.0% | |
| AGCATTCAGATAAGTAGCAT+TGG | + | chr5.3:11233311-11233330 | None:intergenic | 35.0% | |
| AGCCAAAATATCTCTACACT+TGG | + | chr5.3:11237180-11237199 | None:intergenic | 35.0% | |
| AGGTTTCCTAATGGAACAAA+TGG | - | chr5.3:11236197-11236216 | MS.gene89849:intron | 35.0% | |
| AGTTCAATGTAGACTTACCT+AGG | - | chr5.3:11234701-11234720 | MS.gene89849:intron | 35.0% | |
| ATATCCACTAACACTAACAG+TGG | + | chr5.3:11231918-11231937 | None:intergenic | 35.0% | |
| ATCCAGATACTACAAACACA+CGG | + | chr5.3:11235976-11235995 | None:intergenic | 35.0% | |
| ATCTAAGGAAGACTAACAGT+CGG | + | chr5.3:11233255-11233274 | None:intergenic | 35.0% | |
| ATCTCTACACTTGGAATGAT+AGG | + | chr5.3:11237171-11237190 | None:intergenic | 35.0% | |
| CAATTGATACTGCTCAAAGA+TGG | - | chr5.3:11232707-11232726 | MS.gene89849:intron | 35.0% | |
| CCAGGTTAAAACTCATTTAG+AGG | - | chr5.3:11233617-11233636 | MS.gene89849:intron | 35.0% | |
| CTAAAGGGTCATATTGCTTT+GGG | - | chr5.3:11236167-11236186 | MS.gene89849:intron | 35.0% | |
| CTAAGTTCTCGTGTTTGAAA+TGG | + | chr5.3:11236280-11236299 | None:intergenic | 35.0% | |
| CTAGTATGCTTGAGAAAATG+GGG | + | chr5.3:11235516-11235535 | None:intergenic | 35.0% | |
| CTGTTGTGCAATATCTTGTT+TGG | - | chr5.3:11234305-11234324 | MS.gene89849:intron | 35.0% | |
| GAAAATGGGGTCAAATATGA+CGG | + | chr5.3:11235503-11235522 | None:intergenic | 35.0% | |
| GAAGAGAACTATAGAAAGGT+GGG | - | chr5.3:11232385-11232404 | MS.gene89849:intron | 35.0% | |
| GACAACATTCTTCTGATAGA+AGG | + | chr5.3:11234949-11234968 | None:intergenic | 35.0% | |
| GAGCTCTACTAATTCATAAG+TGG | - | chr5.3:11234641-11234660 | MS.gene89849:CDS | 35.0% | |
| GTACAACCATTAAAGTTTGC+AGG | - | chr5.3:11232835-11232854 | MS.gene89849:intron | 35.0% | |
| GTATCAATTGAAATGCACCA+AGG | + | chr5.3:11232697-11232716 | None:intergenic | 35.0% | |
| GTATCTTAACCTATCAAGCA+AGG | + | chr5.3:11234029-11234048 | None:intergenic | 35.0% | |
| TAAATTCCGCTATGCTTTAG+CGG | - | chr5.3:11236957-11236976 | MS.gene89849:intron | 35.0% | |
| TAGAGAGTGAGTTATTAGCA+TGG | - | chr5.3:11234753-11234772 | MS.gene89849:intron | 35.0% | |
| TAGGACATTTCGTAATTGAG+AGG | + | chr5.3:11234784-11234803 | None:intergenic | 35.0% | |
| TATACATATACAAGGGCAGA+AGG | + | chr5.3:11233411-11233430 | None:intergenic | 35.0% | |
| TATTCGATGTCATCCAATAC+AGG | - | chr5.3:11233068-11233087 | MS.gene89849:intron | 35.0% | |
| TGTTCATGGCATTGTTGATA+TGG | - | chr5.3:11232266-11232285 | MS.gene89849:intron | 35.0% | |
| TTACACGAACAGTTCATTTC+GGG | - | chr5.3:11236009-11236028 | MS.gene89849:CDS | 35.0% | |
| TTAGGAGATGATGTTGTTCA+TGG | - | chr5.3:11232252-11232271 | MS.gene89849:intron | 35.0% | |
| TTCCAGAAAACAGCAAAAGT+TGG | - | chr5.3:11232741-11232760 | MS.gene89849:CDS | 35.0% | |
| TTCTTTCTCGAATTCCTTTG+TGG | - | chr5.3:11236346-11236365 | MS.gene89849:CDS | 35.0% | |
| TTTGAGAAATAAGCTTGCAC+AGG | - | chr5.3:11232885-11232904 | MS.gene89849:intron | 35.0% | |
| ! | AATTTTGTCTGGATCAAGCT+CGG | + | chr5.3:11235810-11235829 | None:intergenic | 35.0% |
| ! | AGAAGTTTTCAAACTATGGC+AGG | - | chr5.3:11235125-11235144 | MS.gene89849:intron | 35.0% |
| ! | GTATAATTTGGCCGATTCAA+AGG | + | chr5.3:11234433-11234452 | None:intergenic | 35.0% |
| ! | TATGGTCTTGATTATCGACA+TGG | - | chr5.3:11236372-11236391 | MS.gene89849:CDS | 35.0% |
| ! | TCTTGTTTGGCTGGATAATA+AGG | - | chr5.3:11234318-11234337 | MS.gene89849:intron | 35.0% |
| ! | TGCTACTTATCTGAATGCTA+TGG | - | chr5.3:11233312-11233331 | MS.gene89849:intron | 35.0% |
| ! | TTTAGAACCTGGTTACTATG+AGG | - | chr5.3:11236763-11236782 | MS.gene89849:intron | 35.0% |
| ! | TTTTCAGCTTCATCCAAATG+TGG | + | chr5.3:11237203-11237222 | None:intergenic | 35.0% |
| !! | ATATTGCTTTGGGAAATGCT+AGG | - | chr5.3:11236177-11236196 | MS.gene89849:intron | 35.0% |
| !! | CCTCTAAATGAGTTTTAACC+TGG | + | chr5.3:11233620-11233639 | None:intergenic | 35.0% |
| !! | TACACTCTTATTGGTTTCAC+CGG | + | chr5.3:11233775-11233794 | None:intergenic | 35.0% |
| !! | TGTCAAAGAAAAAGCACTTG+TGG | - | chr5.3:11235271-11235290 | MS.gene89849:CDS | 35.0% |
| !!! | AGATATTTTGGCTCCACATT+TGG | - | chr5.3:11237187-11237206 | MS.gene89849:intron | 35.0% |
| !!! | CAAAGGTTTCTCCTTTTTTG+TGG | + | chr5.3:11234554-11234573 | None:intergenic | 35.0% |
| !!! | CATGCTTTTTCATGATCTGA+AGG | + | chr5.3:11236038-11236057 | None:intergenic | 35.0% |
| !!! | TGGAATTGGTTTTTAGAACC+TGG | - | chr5.3:11236752-11236771 | MS.gene89849:intron | 35.0% |
| AGGATCCCACTCAATTTGAT+TGG | + | chr5.3:11234669-11234688 | None:intergenic | 40.0% | |
| AGGTTTGGCACTCATAACAA+AGG | - | chr5.3:11232005-11232024 | MS.gene89849:CDS | 40.0% | |
| AGTCACCTCAGTCAATTTCA+AGG | + | chr5.3:11235155-11235174 | None:intergenic | 40.0% | |
| ATAGCAAATGCGTGAACAAC+AGG | + | chr5.3:11233138-11233157 | None:intergenic | 40.0% | |
| ATCGCCATCACCATTAAGAA+AGG | + | chr5.3:11235000-11235019 | None:intergenic | 40.0% | |
| ATCGTTCGAGCATATTACCT+GGG | - | chr5.3:11236871-11236890 | MS.gene89849:intron | 40.0% | |
| ATGGAAGACTGTATGAAGGA+TGG | - | chr5.3:11234068-11234087 | MS.gene89849:intron | 40.0% | |
| CAACACTACTTCTGTTTCCT+AGG | + | chr5.3:11234721-11234740 | None:intergenic | 40.0% | |
| CAATTCTGCCTTCGTTTATG+TGG | - | chr5.3:11233167-11233186 | MS.gene89849:intron | 40.0% | |
| CACATAAACGAAGGCAGAAT+TGG | + | chr5.3:11233169-11233188 | None:intergenic | 40.0% | |
| CAGCATTAATTTCTGCTGGT+GGG | + | chr5.3:11232810-11232829 | None:intergenic | 40.0% | |
| CCAAAGCAATATGACCCTTT+AGG | + | chr5.3:11236169-11236188 | None:intergenic | 40.0% | |
| CCTAAAGGGTCATATTGCTT+TGG | - | chr5.3:11236166-11236185 | MS.gene89849:intron | 40.0% | |
| CCTGAAAATGTTTAGACCCT+TGG | - | chr5.3:11235033-11235052 | MS.gene89849:intron | 40.0% | |
| CGAATTCCTTTGTGGAACTA+TGG | - | chr5.3:11236354-11236373 | MS.gene89849:CDS | 40.0% | |
| CTATACCTTCATGGACATTC+AGG | + | chr5.3:11236422-11236441 | None:intergenic | 40.0% | |
| CTGCAGAAAATAACGTCCAT+CGG | + | chr5.3:11232049-11232068 | None:intergenic | 40.0% | |
| CTTCTGGATTTAGAAGGTTC+AGG | + | chr5.3:11237130-11237149 | None:intergenic | 40.0% | |
| CTTGATTATCGACATGGAAC+TGG | - | chr5.3:11236378-11236397 | MS.gene89849:CDS | 40.0% | |
| GAAGTCCTTGAAATTGACTG+AGG | - | chr5.3:11235147-11235166 | MS.gene89849:intron | 40.0% | |
| GCTTGGCTGTATAATATTCG+TGG | - | chr5.3:11233093-11233112 | MS.gene89849:intron | 40.0% | |
| GGAAATGCTAGGTTTCCTAA+TGG | - | chr5.3:11236188-11236207 | MS.gene89849:intron | 40.0% | |
| GGAAGAGAACTATAGAAAGG+TGG | - | chr5.3:11232384-11232403 | MS.gene89849:intron | 40.0% | |
| GGAATTTCGAGCATCAAAAG+AGG | - | chr5.3:11235192-11235211 | MS.gene89849:intron | 40.0% | |
| GTGCAGATGCAGGATATTTA+TGG | - | chr5.3:11234499-11234518 | MS.gene89849:intron | 40.0% | |
| GTGTGTTTGTAGTATCTGGA+TGG | - | chr5.3:11235975-11235994 | MS.gene89849:CDS | 40.0% | |
| TACAGAAGTAAGCGTAGATG+CGG | - | chr5.3:11233665-11233684 | MS.gene89849:intron | 40.0% | |
| TATAGAAAGGTGGGAAGAGA+AGG | - | chr5.3:11232394-11232413 | MS.gene89849:intron | 40.0% | |
| TATCGTTCGAGCATATTACC+TGG | - | chr5.3:11236870-11236889 | MS.gene89849:intron | 40.0% | |
| TATGCAACAGCTGAAAAGAC+CGG | + | chr5.3:11235420-11235439 | None:intergenic | 40.0% | |
| TCAAGACCATAGTTCCACAA+AGG | + | chr5.3:11236363-11236382 | None:intergenic | 40.0% | |
| TGCCAAAAGATGCAGCAATT+GGG | - | chr5.3:11232665-11232684 | MS.gene89849:intron | 40.0% | |
| TGGATGAAGCTGAAAATGCA+TGG | - | chr5.3:11237207-11237226 | MS.gene89849:intron | 40.0% | |
| TGGGTCCAATCAAATTGAGT+GGG | - | chr5.3:11234661-11234680 | MS.gene89849:intron | 40.0% | |
| TTAACCCATCCAATTCCACT+GGG | + | chr5.3:11234258-11234277 | None:intergenic | 40.0% | |
| TTATTGCTTGTAGAACCCAG+TGG | - | chr5.3:11234240-11234259 | MS.gene89849:intron | 40.0% | |
| TTCCCTACTATTTCCTCAGT+AGG | - | chr5.3:11235737-11235756 | MS.gene89849:intron | 40.0% | |
| TTGCCAAAAGATGCAGCAAT+TGG | - | chr5.3:11232664-11232683 | MS.gene89849:intron | 40.0% | |
| ! | ACTATGAGGATGGAGCATTT+GGG | - | chr5.3:11236777-11236796 | MS.gene89849:intron | 40.0% |
| ! | ACTTTGTTTGATATGGTGCC+TGG | + | chr5.3:11237100-11237119 | None:intergenic | 40.0% |
| ! | CAGGATATTTATGGAGCATC+TGG | - | chr5.3:11234508-11234527 | MS.gene89849:intron | 40.0% |
| ! | CCAAGGGTCTAAACATTTTC+AGG | + | chr5.3:11235036-11235055 | None:intergenic | 40.0% |
| ! | GGCTCTTCCAAAAGCTTTAA+AGG | - | chr5.3:11233917-11233936 | MS.gene89849:intron | 40.0% |
| ! | TACTATGAGGATGGAGCATT+TGG | - | chr5.3:11236776-11236795 | MS.gene89849:intron | 40.0% |
| ! | TGCTATGGCTGTAAAAGTAC+CGG | - | chr5.3:11233327-11233346 | MS.gene89849:CDS | 40.0% |
| ! | TGGAGCATTTGGGATAAGAT+TGG | - | chr5.3:11236787-11236806 | MS.gene89849:intron | 40.0% |
| ! | TGTGCAATATCTTGTTTGGC+TGG | - | chr5.3:11234309-11234328 | MS.gene89849:intron | 40.0% |
| ! | TGTTATAGCATAGCGGAACT+TGG | + | chr5.3:11236988-11237007 | None:intergenic | 40.0% |
| !! | AGCATCTGGATACTTTTTGG+AGG | - | chr5.3:11234522-11234541 | MS.gene89849:intron | 40.0% |
| !! | GAATGTGCTTGTTATCAACG+AGG | - | chr5.3:11236811-11236830 | MS.gene89849:intron | 40.0% |
| !! | GGAATTGGATGGGTTAAGAA+AGG | - | chr5.3:11234261-11234280 | MS.gene89849:intron | 40.0% |
| !! | GTTGCTTGATTTGCTGAACT+TGG | - | chr5.3:11236136-11236155 | MS.gene89849:intron | 40.0% |
| !! | TGGAGCATCTGGATACTTTT+TGG | - | chr5.3:11234519-11234538 | MS.gene89849:intron | 40.0% |
| !!! | GACCAACTTTTGCTGTTTTC+TGG | + | chr5.3:11232746-11232765 | None:intergenic | 40.0% |
| AACGCATACTAGACAGACCT+GGG | + | chr5.3:11235852-11235871 | None:intergenic | 45.0% | |
| AACTGCATCAGGGTTCAGTT+TGG | + | chr5.3:11233877-11233896 | None:intergenic | 45.0% | |
| AAGACCCTGCTGTAGATATC+TGG | - | chr5.3:11232115-11232134 | MS.gene89849:intron | 45.0% | |
| ACAGTCATGGAAGCTTGCAA+TGG | + | chr5.3:11236587-11236606 | None:intergenic | 45.0% | |
| ACCTTCATGGACATTCAGGT+AGG | + | chr5.3:11236418-11236437 | None:intergenic | 45.0% | |
| ACGGCAGCATTAATTTCTGC+TGG | + | chr5.3:11232814-11232833 | None:intergenic | 45.0% | |
| AGAACCCAGTGGAATTGGAT+GGG | - | chr5.3:11234251-11234270 | MS.gene89849:intron | 45.0% | |
| AGAGCATAACAGCATGAAGC+TGG | + | chr5.3:11233849-11233868 | None:intergenic | 45.0% | |
| ATGGAACTGGTCACGGTATT+GGG | - | chr5.3:11236391-11236410 | MS.gene89849:CDS | 45.0% | |
| ATGTGCGATTCCTGCATGTA+TGG | + | chr5.3:11235464-11235483 | None:intergenic | 45.0% | |
| CATTCTGTGCAAGTAGTGAC+CGG | - | chr5.3:11235398-11235417 | MS.gene89849:CDS | 45.0% | |
| CCATCCAGATATCTACAGCA+GGG | + | chr5.3:11232122-11232141 | None:intergenic | 45.0% | |
| CCTTGGTCAACACCTAAACA+AGG | + | chr5.3:11232310-11232329 | None:intergenic | 45.0% | |
| CGTTTATGTGGACAAGCGAA+AGG | - | chr5.3:11233179-11233198 | MS.gene89849:intron | 45.0% | |
| CTTAACCCATCCAATTCCAC+TGG | + | chr5.3:11234259-11234278 | None:intergenic | 45.0% | |
| CTTGTAGAACCCAGTGGAAT+TGG | - | chr5.3:11234246-11234265 | MS.gene89849:intron | 45.0% | |
| GAACCTGGTTACTATGAGGA+TGG | - | chr5.3:11236767-11236786 | MS.gene89849:intron | 45.0% | |
| GACAAACCGCTAAAGCATAG+CGG | + | chr5.3:11236966-11236985 | None:intergenic | 45.0% | |
| GACTGTAAGTGACAAGCTTG+AGG | - | chr5.3:11235171-11235190 | MS.gene89849:intron | 45.0% | |
| GAGCGACCTGCAAACTTTAA+TGG | + | chr5.3:11232844-11232863 | None:intergenic | 45.0% | |
| GCAGCATTAATTTCTGCTGG+TGG | + | chr5.3:11232811-11232830 | None:intergenic | 45.0% | |
| GCATCCACTGTTAGTGTTAG+TGG | - | chr5.3:11231911-11231930 | MS.gene89849:CDS | 45.0% | |
| GCCAAAAGATGCAGCAATTG+GGG | - | chr5.3:11232666-11232685 | MS.gene89849:intron | 45.0% | |
| GGAGGAGAACACCACAAAAA+AGG | - | chr5.3:11234540-11234559 | MS.gene89849:intron | 45.0% | |
| GGCCTACTGAGGAAATAGTA+GGG | + | chr5.3:11235742-11235761 | None:intergenic | 45.0% | |
| GGTCACTACTTGCACAGAAT+GGG | + | chr5.3:11235399-11235418 | None:intergenic | 45.0% | |
| GGTTAAGAAAGGCCCATGTT+CGG | - | chr5.3:11234272-11234291 | MS.gene89849:intron | 45.0% | |
| GTCATCCAATACAGGTTGCT+TGG | - | chr5.3:11233076-11233095 | MS.gene89849:intron | 45.0% | |
| GTGGGTCCAATCAAATTGAG+TGG | - | chr5.3:11234660-11234679 | MS.gene89849:intron | 45.0% | |
| GTTAAGAAAGGCCCATGTTC+GGG | - | chr5.3:11234273-11234292 | MS.gene89849:intron | 45.0% | |
| TAACGCATACTAGACAGACC+TGG | + | chr5.3:11235853-11235872 | None:intergenic | 45.0% | |
| TACAGCCAAGCAACCTGTAT+TGG | + | chr5.3:11233084-11233103 | None:intergenic | 45.0% | |
| TAGAACCCAGTGGAATTGGA+TGG | - | chr5.3:11234250-11234269 | MS.gene89849:intron | 45.0% | |
| TATCGACATGGAACTGGTCA+CGG | - | chr5.3:11236384-11236403 | MS.gene89849:CDS | 45.0% | |
| TCACGAGAGGATGCTTACAA+AGG | + | chr5.3:11234571-11234590 | None:intergenic | 45.0% | |
| TCCTACCTGAATGTCCATGA+AGG | - | chr5.3:11236414-11236433 | MS.gene89849:CDS | 45.0% | |
| TCGCTTGTCCACATAAACGA+AGG | + | chr5.3:11233178-11233197 | None:intergenic | 45.0% | |
| TTGGTTCAATGTGCAGATGC+AGG | - | chr5.3:11234489-11234508 | MS.gene89849:intron | 45.0% | |
| TTGTTCGATGTTTCTCGTCC+AGG | - | chr5.3:11237079-11237098 | MS.gene89849:CDS | 45.0% | |
| ! | ACCCCAATTGCTGCATCTTT+TGG | + | chr5.3:11232670-11232689 | None:intergenic | 45.0% |
| ! | ACTGGTTTCGTTTGTTAGCC+CGG | - | chr5.3:11234860-11234879 | MS.gene89849:CDS | 45.0% |
| ! | GAAGGATGGCTGACAGTTTT+TGG | - | chr5.3:11234082-11234101 | MS.gene89849:intron | 45.0% |
| ! | TACAGCAAGATCTGAGGTGT+CGG | - | chr5.3:11234450-11234469 | MS.gene89849:intron | 45.0% |
| !! | AAAGCTTTTGGAAGAGCCAG+AGG | + | chr5.3:11233915-11233934 | None:intergenic | 45.0% |
| !! | AACTTCAGCTAGACTAGCCT+TGG | + | chr5.3:11233730-11233749 | None:intergenic | 45.0% |
| !! | AACTTGGTGCAGGTCCTAAA+GGG | - | chr5.3:11236152-11236171 | MS.gene89849:intron | 45.0% |
| !! | ATGTTAGAGAGTGTCACGAG+AGG | + | chr5.3:11234584-11234603 | None:intergenic | 45.0% |
| !! | CAAAGGATGAAGCACTGCTT+TGG | - | chr5.3:11232022-11232041 | MS.gene89849:CDS | 45.0% |
| !! | CAAGCGAAAGGTGTCTATTG+AGG | - | chr5.3:11233191-11233210 | MS.gene89849:intron | 45.0% |
| !! | CCTTGTTTAGGTGTTGACCA+AGG | - | chr5.3:11232307-11232326 | MS.gene89849:CDS | 45.0% |
| !! | CGATGGACGTTATTTTCTGC+AGG | - | chr5.3:11232047-11232066 | MS.gene89849:intron | 45.0% |
| !! | TGATTTGCTGAACTTGGTGC+AGG | - | chr5.3:11236142-11236161 | MS.gene89849:intron | 45.0% |
| !!! | TCTTTTTGATTCTGGAGCCC+AGG | - | chr5.3:11235832-11235851 | MS.gene89849:intron | 45.0% |
| AAGCTGGATCAGCCCATATG+AGG | + | chr5.3:11233833-11233852 | None:intergenic | 50.0% | |
| ACTGTCACAAATGCCAACCC+GGG | + | chr5.3:11234881-11234900 | None:intergenic | 50.0% | |
| CACTGTCACAAATGCCAACC+CGG | + | chr5.3:11234882-11234901 | None:intergenic | 50.0% | |
| CAGACTCTGACCATACATGC+AGG | - | chr5.3:11235451-11235470 | MS.gene89849:CDS | 50.0% | |
| CATGGAACTGGTCACGGTAT+TGG | - | chr5.3:11236390-11236409 | MS.gene89849:CDS | 50.0% | |
| CCCTGCTGTAGATATCTGGA+TGG | - | chr5.3:11232119-11232138 | MS.gene89849:intron | 50.0% | |
| CGGTCACTACTTGCACAGAA+TGG | + | chr5.3:11235400-11235419 | None:intergenic | 50.0% | |
| CTAACCGTCGGTAACAGTCA+TGG | + | chr5.3:11236600-11236619 | None:intergenic | 50.0% | |
| GACCACTCAGCAGCAATTCA+TGG | + | chr5.3:11232557-11232576 | None:intergenic | 50.0% | |
| GCCATCCAGATATCTACAGC+AGG | + | chr5.3:11232123-11232142 | None:intergenic | 50.0% | |
| GCTCCATCCTCATAGTAACC+AGG | + | chr5.3:11236773-11236792 | None:intergenic | 50.0% | |
| GCTGCAAGACAACTGCATCA+GGG | + | chr5.3:11233887-11233906 | None:intergenic | 50.0% | |
| GCTTCCATGACTGTTACCGA+CGG | - | chr5.3:11236593-11236612 | MS.gene89849:intron | 50.0% | |
| GGCCGTGTGTTTGTAGTATC+TGG | - | chr5.3:11235971-11235990 | MS.gene89849:CDS | 50.0% | |
| GGGCCTACTGAGGAAATAGT+AGG | + | chr5.3:11235743-11235762 | None:intergenic | 50.0% | |
| GTCCATGAATTGCTGCTGAG+TGG | - | chr5.3:11232552-11232571 | MS.gene89849:CDS | 50.0% | |
| TCACACAGCTACAGGTTCTG+TGG | + | chr5.3:11237243-11237262 | None:intergenic | 50.0% | |
| TCAGCAGCAATTCATGGACG+AGG | + | chr5.3:11232551-11232570 | None:intergenic | 50.0% | |
| TGATTCCGTGTCTACTGCCA+AGG | - | chr5.3:11233710-11233729 | MS.gene89849:intron | 50.0% | |
| TGCTGCAAGACAACTGCATC+AGG | + | chr5.3:11233888-11233907 | None:intergenic | 50.0% | |
| TGTCTTGCAGCAATCACCTC+TGG | - | chr5.3:11233896-11233915 | MS.gene89849:intron | 50.0% | |
| ! | CTGGTTTCGTTTGTTAGCCC+GGG | - | chr5.3:11234861-11234880 | MS.gene89849:CDS | 50.0% |
| ! | TTTCGTTTGTTAGCCCGGGT+TGG | - | chr5.3:11234865-11234884 | MS.gene89849:CDS | 50.0% |
| !! | ACTAGCCTTGGCAGTAGACA+CGG | + | chr5.3:11233718-11233737 | None:intergenic | 50.0% |
| !! | GAACTTGGTGCAGGTCCTAA+AGG | - | chr5.3:11236151-11236170 | MS.gene89849:intron | 50.0% |
| !! | GCATTTGGTTCTCGTGTCTC+TGG | - | chr5.3:11234344-11234363 | MS.gene89849:intron | 50.0% |
| ACACAGGTTAGGACTCACCC+AGG | + | chr5.3:11236891-11236910 | None:intergenic | 55.0% | |
| AGAAAGGCCCATGTTCGGGA+TGG | - | chr5.3:11234277-11234296 | MS.gene89849:intron | 55.0% | |
| CAGCAATTGGGGTTGACCCT+TGG | - | chr5.3:11232677-11232696 | MS.gene89849:intron | 55.0% | |
| ! | TCGGCACATGTTTCTGCCTC+TGG | + | chr5.3:11235791-11235810 | None:intergenic | 55.0% |
| !! | CGGGTTGGCATTTGTGACAG+TGG | - | chr5.3:11234880-11234899 | MS.gene89849:CDS | 55.0% |
| !! | GAAGCACTGCTTTGGACCGA+TGG | - | chr5.3:11232030-11232049 | MS.gene89849:CDS | 55.0% |
| AGCCGCACCATCCCGAACAT+GGG | + | chr5.3:11234287-11234306 | None:intergenic | 60.0% | |
| AGCTGCGTTTGGGCCTACTG+AGG | + | chr5.3:11235753-11235772 | None:intergenic | 60.0% | |
| ! | CTTGCACAGGAGCATGCTCG+AGG | - | chr5.3:11232898-11232917 | MS.gene89849:intron | 60.0% |
| CAGCCGCACCATCCCGAACA+TGG | + | chr5.3:11234288-11234307 | None:intergenic | 65.0% | |
| GGCCCATGTTCGGGATGGTG+CGG | - | chr5.3:11234282-11234301 | MS.gene89849:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 11231904 | 11237262 | 11231904 | ID=MS.gene89849 |
| chr5.3 | mRNA | 11231904 | 11237262 | 11231904 | ID=MS.gene89849.t1;Parent=MS.gene89849 |
| chr5.3 | exon | 11237247 | 11237262 | 11237247 | ID=MS.gene89849.t1.exon1;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11237247 | 11237262 | 11237247 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11237020 | 11237159 | 11237020 | ID=MS.gene89849.t1.exon2;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11237020 | 11237159 | 11237020 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11236221 | 11236505 | 11236221 | ID=MS.gene89849.t1.exon3;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11236221 | 11236505 | 11236221 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11235954 | 11236076 | 11235954 | ID=MS.gene89849.t1.exon4;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11235954 | 11236076 | 11235954 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11235228 | 11235545 | 11235228 | ID=MS.gene89849.t1.exon5;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11235228 | 11235545 | 11235228 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11234827 | 11234913 | 11234827 | ID=MS.gene89849.t1.exon6;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11234827 | 11234913 | 11234827 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11234594 | 11234661 | 11234594 | ID=MS.gene89849.t1.exon7;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11234594 | 11234661 | 11234594 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11233953 | 11234019 | 11233953 | ID=MS.gene89849.t1.exon8;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11233953 | 11234019 | 11233953 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11233313 | 11233447 | 11233313 | ID=MS.gene89849.t1.exon9;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11233313 | 11233447 | 11233313 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11233099 | 11233179 | 11233099 | ID=MS.gene89849.t1.exon10;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11233099 | 11233179 | 11233099 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11232948 | 11233002 | 11232948 | ID=MS.gene89849.t1.exon11;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11232948 | 11233002 | 11232948 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11232731 | 11232835 | 11232731 | ID=MS.gene89849.t1.exon12;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11232731 | 11232835 | 11232731 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11232552 | 11232617 | 11232552 | ID=MS.gene89849.t1.exon13;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11232552 | 11232617 | 11232552 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11232274 | 11232398 | 11232274 | ID=MS.gene89849.t1.exon14;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11232274 | 11232398 | 11232274 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| chr5.3 | exon | 11231904 | 11232065 | 11231904 | ID=MS.gene89849.t1.exon15;Parent=MS.gene89849.t1 |
| chr5.3 | CDS | 11231904 | 11232065 | 11231904 | ID=cds.MS.gene89849.t1;Parent=MS.gene89849.t1 |
| Gene Sequence |
| Protein sequence |
