AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072472


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072472.t1 MTR_7g113480 91.725 713 39 2 528 1220 1 713 0.0 1332
MS.gene072472.t1 MTR_7g113480 91.390 662 37 2 528 1169 1 662 0.0 1228
MS.gene072472.t1 MTR_7g113480 91.429 630 34 2 528 1137 1 630 0.0 1165
MS.gene072472.t1 MTR_7g113480 96.357 549 20 0 672 1220 1 549 0.0 1107
MS.gene072472.t1 MTR_7g113470 99.620 527 2 0 1 527 1 527 0.0 1063
MS.gene072472.t1 MTR_7g113480 96.154 520 20 0 701 1220 17 536 0.0 1046
MS.gene072472.t1 MTR_7g067470 97.723 527 12 0 1 527 1 527 0.0 1041
MS.gene072472.t1 MTR_5g019600 41.150 661 323 12 609 1215 5 653 6.27e-156 482
MS.gene072472.t1 MTR_5g087560 36.031 519 321 6 6 516 11 526 4.83e-93 310
MS.gene072472.t1 MTR_8g088270 35.424 542 316 11 1 516 1 534 5.95e-86 290
MS.gene072472.t1 MTR_3g109925 34.816 517 318 7 14 517 20 530 7.54e-81 275
MS.gene072472.t1 MTR_3g086330 33.714 525 328 10 6 517 14 531 2.07e-78 269
MS.gene072472.t1 MTR_5g019600 35.699 465 234 11 609 1019 5 458 6.82e-76 259
MS.gene072472.t1 MTR_3g109925 31.961 510 285 7 14 517 20 473 4.18e-65 229
MS.gene072472.t1 MTR_2g013540 29.699 532 352 12 6 523 7 530 1.50e-59 215
MS.gene072472.t1 MTR_7g406870 29.903 515 339 8 26 524 25 533 2.71e-58 211
MS.gene072472.t1 MTR_6g032870 28.715 498 342 8 30 520 33 524 1.25e-48 182
MS.gene072472.t1 MTR_1g030650 28.112 498 345 8 30 520 36 527 1.97e-48 182
MS.gene072472.t1 MTR_7g406870 28.297 417 279 7 116 516 1 413 9.06e-38 147
MS.gene072472.t1 MTR_8g105970 31.757 296 175 9 189 478 75 349 2.36e-33 133
MS.gene072472.t1 MTR_3g465910 84.337 83 10 1 379 458 453 535 2.02e-32 134
MS.gene072472.t1 MTR_2g013540 25.781 384 268 8 154 523 1 381 2.03e-28 119
MS.gene072472.t1 MTR_3g466600 88.235 51 6 0 431 481 1 51 2.01e-23 95.1
MS.gene072472.t1 MTR_3g465900 76.786 56 12 1 483 537 1 56 2.40e-18 85.5
MS.gene072472.t1 MTR_1g090140 24.429 569 325 22 16 525 40 562 3.69e-14 77.4
MS.gene072472.t1 MTR_8g017080 24.015 533 326 17 16 502 41 540 5.77e-13 73.6
MS.gene072472.t1 MTR_1g090130 23.310 562 340 20 16 525 40 562 6.18e-13 73.6
MS.gene072472.t1 MTR_0991s0010 37.273 110 63 2 26 131 65 172 1.84e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072472.t1 AT3G05350 68.696 690 191 4 544 1215 25 707 0.0 983
MS.gene072472.t1 AT5G20890 88.235 527 62 0 1 527 1 527 0.0 932
MS.gene072472.t1 AT4G36760 39.970 658 323 10 609 1215 5 641 4.60e-161 495
MS.gene072472.t1 AT4G36760 39.970 658 323 10 609 1215 5 641 9.86e-161 494
MS.gene072472.t1 AT4G36760 39.970 658 323 10 609 1215 5 641 1.12e-160 494
MS.gene072472.t1 AT3G20050 35.294 527 310 9 14 516 15 534 2.28e-90 303
MS.gene072472.t1 AT3G11830 36.031 519 321 6 6 516 11 526 2.34e-89 300
MS.gene072472.t1 AT3G11830 35.838 519 320 7 6 516 11 524 4.79e-87 293
MS.gene072472.t1 AT3G18190 35.397 517 315 8 14 517 24 534 5.55e-84 285
MS.gene072472.t1 AT1G24510 33.207 527 322 11 8 517 18 531 1.08e-77 267
MS.gene072472.t1 AT1G24510 32.845 478 293 10 57 517 12 478 4.79e-67 235
MS.gene072472.t1 AT1G24510 31.965 463 293 8 69 517 1 455 6.35e-62 219
MS.gene072472.t1 AT3G02530 30.309 518 331 11 27 524 26 533 1.47e-58 212
MS.gene072472.t1 AT5G16070 31.286 521 321 15 27 524 26 532 3.25e-58 211
MS.gene072472.t1 AT5G26360 29.135 532 355 10 6 523 7 530 9.69e-55 201
MS.gene072472.t1 AT3G03960 29.116 498 340 9 30 520 39 530 3.69e-48 181
MS.gene072472.t1 AT3G23990 24.820 556 331 20 16 521 39 557 1.90e-16 84.7
MS.gene072472.t1 AT2G33210 24.643 560 329 23 16 522 40 559 2.23e-16 84.7
MS.gene072472.t1 AT2G33210 23.551 552 340 20 16 522 40 554 4.33e-15 80.5

Find 281 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCAATAAATTATTCTTAT+TGG 0.138070 7.3:-3533954 MS.gene072472:CDS
CTGCTGCCCTTGCTCAGTTC+TGG 0.152105 7.3:-3534566 MS.gene072472:CDS
GAGAAACAGGGGAGGATTTC+TGG 0.159854 7.3:+3535407 None:intergenic
AGGAGGTTTGTTATGTTTAT+TGG 0.178219 7.3:+3537521 None:intergenic
ATCATCAGTGAAACAGTTTA+AGG 0.178580 7.3:-3530953 None:intergenic
TCCTTTGCCATTACCATTTC+AGG 0.181073 7.3:+3540240 None:intergenic
ATCCAATAAGAATAATTTAT+TGG 0.200077 7.3:+3533952 None:intergenic
TGCACTCTAACAGGCTTATT+TGG 0.207462 7.3:+3536328 None:intergenic
CATTTGCACGATCCTTTCTT+TGG 0.216716 7.3:-3533570 MS.gene072472:CDS
CTTGTCTTGTGAGAGAATTT+TGG 0.234265 7.3:+3542971 None:intergenic
CTCAAAACAAGCTGGTTTCT+TGG 0.256747 7.3:-3534466 MS.gene072472:CDS
CGACGGAGGGCGGTGAGTTT+GGG 0.259327 7.3:+3537402 None:intergenic
CTTTGCATTCTCTATGCGTT+TGG 0.270372 7.3:+3541703 None:intergenic
ATTACACGGACAGTTCATTT+TGG 0.274255 7.3:-3533896 MS.gene072472:CDS
TGCTGCCCTTGCTCAGTTCT+GGG 0.276895 7.3:-3534565 MS.gene072472:CDS
ACGACGGAGGGCGGTGAGTT+TGG 0.277564 7.3:+3537401 None:intergenic
GAATGCAAGATTGTCATTTA+AGG 0.279658 7.3:-3535348 MS.gene072472:intron
TTTATTCTTGACAAGAAAAT+TGG 0.289639 7.3:-3541737 MS.gene072472:CDS
CAAATCTTGTGGATGAAATA+TGG 0.290355 7.3:-3536372 MS.gene072472:CDS
ACAACTACCACTCAGTAGTA+TGG 0.292302 7.3:-3531829 MS.gene072472:CDS
CAGCACGAGGTGCCGCCCTT+TGG 0.301925 7.3:-3535576 MS.gene072472:CDS
CACTCTTTCTCTCTAGTTGT+TGG 0.302750 7.3:+3533869 None:intergenic
GAGCGTTTGGCTCTGGTAAC+TGG 0.312271 7.3:-3541428 MS.gene072472:CDS
ATGGCCTTTGCTAGAGAAAC+AGG 0.313957 7.3:+3535394 None:intergenic
GTGCATGACCTAAAGTATTC+TGG 0.318859 7.3:-3536310 MS.gene072472:CDS
CTCCAGGCTTCTTTATAATC+TGG 0.321069 7.3:+3542027 None:intergenic
CGATCCTTTCTTTGGAAAGT+TGG 0.321545 7.3:-3533562 MS.gene072472:CDS
TCTGTCGCATGCAGCTTTAT+AGG 0.322788 7.3:+3535516 None:intergenic
TCGTGTTCGTGTTGACTCTA+TGG 0.326461 7.3:-3541627 MS.gene072472:CDS
GTTGAGACACCAAATCGTTT+TGG 0.335447 7.3:-3532516 MS.gene072472:CDS
TCCACAGGTTTCACCATTGC+TGG 0.345962 7.3:-3531017 MS.gene072472:intron
CATCTAAACCAGAATACTTT+AGG 0.348338 7.3:+3536302 None:intergenic
TTTAGGTCATGCACTCTAAC+AGG 0.349127 7.3:+3536319 None:intergenic
GCTCTGCTCGCCAATGGCTT+TGG 0.349972 7.3:-3530991 MS.gene072472:CDS
TTTGCATTCTCTATGCGTTT+GGG 0.352812 7.3:+3541704 None:intergenic
GTACTACAACTCTCTGGTTC+TGG 0.354412 7.3:+3533983 None:intergenic
CAGCAGTACATCCCTCATTC+TGG 0.365145 7.3:+3540070 None:intergenic
TCTGAGGTCTGAACTTGTTC+AGG 0.366333 7.3:-3536260 MS.gene072472:CDS
GGTAGAAGACAATACATATC+TGG 0.367129 7.3:-3537291 MS.gene072472:CDS
TAAACTGTTTCACTGATGAT+AGG 0.369163 7.3:+3530956 None:intergenic
TGACTTCCTCCAAAACGATT+TGG 0.369310 7.3:+3532507 None:intergenic
GCATAACTTGCAGATAAAAT+TGG 0.370195 7.3:-3531894 MS.gene072472:intron
TGAGATTGAGATTGAGATTG+AGG 0.373122 7.3:+3537559 None:intergenic
AGATGCTGTAATGAGATTAA+AGG 0.378997 7.3:-3542925 MS.gene072472:intron
CATCCCATGACTATAATTGC+AGG 0.379746 7.3:-3543280 MS.gene072472:CDS
CCCTTGCTCAGTTCTGGGAT+TGG 0.382341 7.3:-3534560 MS.gene072472:CDS
AAATTATTCTTATTGGATAG+TGG 0.384241 7.3:-3533947 MS.gene072472:CDS
TCTTGATCAGGCAGTCTTCC+CGG 0.384970 7.3:-3533620 MS.gene072472:CDS
GGCCATGGCTATTGCTGACT+TGG 0.384996 7.3:-3543551 MS.gene072472:CDS
AAGACCATGCTTTCGGCATT+CGG 0.388615 7.3:-3533295 MS.gene072472:CDS
GGTTGGAGACATGGTTGAAC+GGG 0.390613 7.3:-3539462 MS.gene072472:CDS
ATTCTGTCTTCTCTCCTCCT+TGG 0.391078 7.3:+3539341 None:intergenic
ATCCATTCCCTTTGGGCCTA+AGG 0.391153 7.3:+3543519 None:intergenic
CAAAACCAGGGGTATCTTCC+GGG 0.391835 7.3:+3533602 None:intergenic
GCTTACATACGTGCCCATTC+AGG 0.392351 7.3:-3532466 MS.gene072472:intron
TTATGATATCATCAACTCTA+AGG 0.402837 7.3:+3539372 None:intergenic
CAAGGTATCAGTTACCGTTA+TGG 0.404564 7.3:-3533374 MS.gene072472:CDS
GAGGATTTCTGGACAGCAAT+GGG 0.404605 7.3:+3535418 None:intergenic
TGAGTGGCTCAATGAGGTTT+TGG 0.404752 7.3:-3537019 MS.gene072472:CDS
TCTCTCTCCTTTCTCTTCGC+TGG 0.406197 7.3:+3543597 None:intergenic
AGCAGGGTGTTGCTTGGAGG+CGG 0.406361 7.3:-3540267 MS.gene072472:CDS
GCATTATCAGCAATGGTTGT+TGG 0.407647 7.3:+3540138 None:intergenic
GATCCTTTCTTTGGAAAGTT+GGG 0.415093 7.3:-3533561 MS.gene072472:CDS
CATTGCTGATAATGCTGGTT+TGG 0.419056 7.3:-3540130 MS.gene072472:CDS
AACTACCTCTGTTGTTGTAT+TGG 0.419643 7.3:-3543350 MS.gene072472:CDS
CATAGAGAATGCAAAGATAC+TGG 0.422234 7.3:-3541696 MS.gene072472:CDS
CTTATTGAAGAGATTATGAT+TGG 0.428527 7.3:-3541347 MS.gene072472:CDS
GAGATTGAGGAAGGAGGAGG+AGG 0.429171 7.3:+3537572 None:intergenic
TATTATGAAGACCATGCTTT+CGG 0.430181 7.3:-3533302 MS.gene072472:CDS
ATCAAATATGCATACACAAC+AGG 0.436777 7.3:+3535941 None:intergenic
TGCTTTCGGCATTCGGATTG+AGG 0.439904 7.3:-3533288 MS.gene072472:intron
TTCTGGTGTTGCAATGGGGC+AGG 0.444806 7.3:-3541303 MS.gene072472:CDS
CTATGTTTGCTTTCTTCAAG+TGG 0.444865 7.3:+3535855 None:intergenic
CTTCACCTTGTCTGTGTCCA+TGG 0.445280 7.3:+3541661 None:intergenic
ACAGACAAGGTGAAGATATA+CGG 0.446868 7.3:-3541653 MS.gene072472:CDS
CTCATGCGTGCTGGAAATCC+AGG 0.447160 7.3:-3537057 MS.gene072472:CDS
TATTTGATTGTGGAGATTGA+TGG 0.448485 7.3:-3535926 MS.gene072472:CDS
AGAAGCAACTGAACTCCAAT+TGG 0.450371 7.3:-3537083 MS.gene072472:CDS
TGGAGGCGGGTGGCCTGAAA+TGG 0.452003 7.3:-3540253 MS.gene072472:CDS
AGGGATAATGTAAGCGTCAA+TGG 0.452562 7.3:+3537356 None:intergenic
TGAGGAAGGAGGAGGAGGAG+TGG 0.455539 7.3:+3537577 None:intergenic
CTCTGGTGAGCGTCTTGAGA+AGG 0.456914 7.3:+3537336 None:intergenic
GAGGAGCTCTTTGCTGATGC+GGG 0.457731 7.3:-3541488 MS.gene072472:CDS
GCATCAGCAAAGAGCTCCTC+TGG 0.457957 7.3:+3541491 None:intergenic
TAGTCCTTGCAATGTTCATC+AGG 0.458776 7.3:+3543003 None:intergenic
TAGTGTATGATAGCACCATT+TGG 0.458901 7.3:+3534010 None:intergenic
ACAGTGCTGAGTTGATTTCT+CGG 0.458993 7.3:-3540107 MS.gene072472:CDS
ATTGAGATTGAGATTGAGGA+AGG 0.459521 7.3:+3537563 None:intergenic
GCTGGAATTGATGTCATCTC+TGG 0.462467 7.3:-3540051 MS.gene072472:CDS
TGCGGAAATGGAACTGGAAG+AGG 0.463316 7.3:+3537476 None:intergenic
CAGCCATTGGCATACCTGAA+TGG 0.464361 7.3:+3532452 None:intergenic
GTCAATGGAGACATCTGGTT+TGG 0.465101 7.3:+3537371 None:intergenic
GGAAAGTTGGGCTTGACTAC+AGG 0.465682 7.3:-3533549 MS.gene072472:CDS
GGTGAGTTTGGGGTCGGAGT+CGG 0.466526 7.3:+3537413 None:intergenic
GCAGGGTGTTGCTTGGAGGC+GGG 0.468045 7.3:-3540266 MS.gene072472:CDS
AGGAGGAGGAGTGGATTGAG+AGG 0.470274 7.3:+3537586 None:intergenic
ACCTCTGTTGTTGTATTGGC+TGG 0.470611 7.3:-3543346 MS.gene072472:CDS
AGCACGCATGAGAATCCAAT+TGG 0.472766 7.3:+3537068 None:intergenic
AACCCTGAGTCTGTTAAGCT+TGG 0.475389 7.3:-3541380 MS.gene072472:CDS
CTCAGACTGTCAATGACAGC+AGG 0.476182 7.3:-3540284 MS.gene072472:CDS
AGGTCTGAACTTGTTCAGGC+TGG 0.477425 7.3:-3536256 MS.gene072472:CDS
GCTAAAGTTGCTGAGATTGA+AGG 0.478957 7.3:-3541605 MS.gene072472:CDS
TCACTAGTAGTAGGTACTCC+TGG 0.480886 7.3:+3537039 None:intergenic
TGCCCAAGCTTAACAGACTC+AGG 0.481251 7.3:+3541377 None:intergenic
GAGTTCATCGCTGAATGTTA+CGG 0.481317 7.3:-3537312 MS.gene072472:CDS
GGCAAAGGAAATTGATGCAT+TGG 0.483080 7.3:-3540226 MS.gene072472:CDS
CAGAATGAGGGATGTACTGC+TGG 0.484170 7.3:-3540069 MS.gene072472:CDS
GAAGGAGAAAATGAAAGAAA+AGG 0.485024 7.3:-3541576 MS.gene072472:CDS
AAAGTTCAAGATGATGAAGT+TGG 0.486158 7.3:-3543379 MS.gene072472:CDS
ACAGGCTTATTTGGAGGCTC+CGG 0.487763 7.3:+3536337 None:intergenic
AGCCATTGGCATACCTGAAT+GGG 0.488613 7.3:+3532453 None:intergenic
CCGCGCTGAGCACCAGAATG+AGG 0.489347 7.3:-3540082 MS.gene072472:CDS
AAGCCCAACTTTCCAAAGAA+AGG 0.493763 7.3:+3533558 None:intergenic
AATTGGATTCTCATGCGTGC+TGG 0.493816 7.3:-3537066 MS.gene072472:CDS
GAAAAGGTGAACAAGATCAT+AGG 0.494619 7.3:-3541560 MS.gene072472:CDS
TGGATGGCTCTGCTCGCCAA+TGG 0.496777 7.3:-3530997 MS.gene072472:CDS
GGGTCATATAGCTCTTGATC+AGG 0.501429 7.3:-3533632 MS.gene072472:CDS
TACCTTAGGCCCAAAGGGAA+TGG 0.504259 7.3:-3543521 MS.gene072472:CDS
TCGGATACAATCGAATTGTA+TGG 0.504696 7.3:+3535824 None:intergenic
ACCCTGAGTCTGTTAAGCTT+GGG 0.506927 7.3:-3541379 MS.gene072472:CDS
TGGTATTGAGCGTTTGGCTC+TGG 0.508693 7.3:-3541435 MS.gene072472:CDS
CTTGACAAGAAAATTGGTCT+CGG 0.509152 7.3:-3541731 MS.gene072472:CDS
GAAACCTGCAATTATAGTCA+TGG 0.510564 7.3:+3543276 None:intergenic
TAAGCGTCAATGGAGACATC+TGG 0.510688 7.3:+3537366 None:intergenic
GGCATCATGCAATGACCTCT+CGG 0.511037 7.3:+3540320 None:intergenic
GTCCAGATTATAAAGAAGCC+TGG 0.511659 7.3:-3542029 MS.gene072472:CDS
ACAAAACCAGGGGTATCTTC+CGG 0.511682 7.3:+3533601 None:intergenic
CATTAGTGACAGTAACTTCA+CGG 0.513830 7.3:+3543470 None:intergenic
TGAGTGTGCTCGTAGTGCTT+TGG 0.514026 7.3:-3543242 MS.gene072472:CDS
TCGACGAGGACTTTAGCAGC+TGG 0.514395 7.3:+3543409 None:intergenic
AATTGCGTGGTTGTTGAACT+TGG 0.515023 7.3:-3536200 MS.gene072472:intron
ATTCAGCGATGAACTCGCTC+TGG 0.515881 7.3:+3537319 None:intergenic
TTCTGTTGATATCCTATCGT+TGG 0.516333 7.3:+3534521 None:intergenic
TTGAGCCACTCACTAGTAGT+AGG 0.517366 7.3:+3537030 None:intergenic
ACAACCATTGCTGATAATGC+TGG 0.517593 7.3:-3540135 MS.gene072472:CDS
AACGGTAACTGATACCTTGA+GGG 0.519014 7.3:+3533378 None:intergenic
AGGAAATTGATGCATTGGCC+AGG 0.519392 7.3:-3540221 MS.gene072472:CDS
GGTTCAGGTTCCGGTCCAAA+TGG 0.521296 7.3:-3534025 MS.gene072472:intron
AGTATGATACCTGCAAAACT+CGG 0.521542 7.3:+3533840 None:intergenic
GGAGGATTTCTGGACAGCAA+TGG 0.521613 7.3:+3535417 None:intergenic
ATTGAGATTGAGGAAGGAGG+AGG 0.522372 7.3:+3537569 None:intergenic
CAACTACCACTCAGTAGTAT+GGG 0.524098 7.3:-3531828 MS.gene072472:CDS
GACAGCAGGGTGTTGCTTGG+AGG 0.524224 7.3:-3540270 MS.gene072472:CDS
GATGAAGCCAGCGAAGAGAA+AGG 0.524809 7.3:-3543604 MS.gene072472:CDS
CCACTCAGTAGTATGGGAAA+AGG 0.525510 7.3:-3531822 MS.gene072472:intron
CAGGTTTCACCATTGCTGGA+TGG 0.525995 7.3:-3531013 MS.gene072472:CDS
TTTGTACAATTCAAATCTTG+TGG 0.526383 7.3:-3536383 MS.gene072472:CDS
GAGTTTCGCTCAAAACAAGC+TGG 0.527663 7.3:-3534474 MS.gene072472:CDS
ACGAGGTGCCGCCCTTTGGT+TGG 0.529461 7.3:-3535572 MS.gene072472:CDS
CGCGCTGAGCACCAGAATGA+GGG 0.529599 7.3:-3540081 MS.gene072472:CDS
AATGCATCCAGCACAAAACC+AGG 0.530179 7.3:+3533589 None:intergenic
ACTCTAACAGGCTTATTTGG+AGG 0.530606 7.3:+3536331 None:intergenic
AGAAAGCAAACATAGAGATC+AGG 0.530867 7.3:-3535847 MS.gene072472:CDS
GAGCACACTCAGCCGCCATT+CGG 0.530966 7.3:+3543254 None:intergenic
TTGGCGCCAGGTGCTAGAGT+TGG 0.531454 7.3:-3537000 MS.gene072472:CDS
CTTCTGGTAGGTTGGAGACA+TGG 0.533014 7.3:-3539471 MS.gene072472:intron
GACTTGGTTAAGACTACCTT+AGG 0.535018 7.3:-3543535 MS.gene072472:CDS
GTCTTCCCGGAAGATACCCC+TGG 0.535450 7.3:-3533607 MS.gene072472:CDS
GAGATTGAGATTGAGGAAGG+AGG 0.538408 7.3:+3537566 None:intergenic
CGGGTGGCCTGAAATGGTAA+TGG 0.539649 7.3:-3540247 MS.gene072472:CDS
ATAGGAACTGGGCATGGTGT+AGG 0.540303 7.3:-3533425 MS.gene072472:intron
AGTGGTGCTCAATATGTTGA+TGG 0.542016 7.3:-3533929 MS.gene072472:CDS
AATTTGACCCCTCTAGTGAA+TGG 0.542154 7.3:-3533350 MS.gene072472:CDS
GGGTGTTGCTTGGAGGCGGG+TGG 0.542712 7.3:-3540263 MS.gene072472:CDS
GCATACACAACAGGTGAATG+TGG 0.543084 7.3:+3535950 None:intergenic
TGTACAAATAAACGAGCTCA+TGG 0.543589 7.3:+3536398 None:intergenic
TGAAGCATTCAAAGTCAAGC+AGG 0.543590 7.3:-3539432 MS.gene072472:CDS
AGAGGAAGTATCCAACCAAA+GGG 0.548045 7.3:+3535561 None:intergenic
TCCACAGTACTACAACTCTC+TGG 0.548101 7.3:+3533977 None:intergenic
CGACGAGGACTTTAGCAGCT+GGG 0.549343 7.3:+3543410 None:intergenic
TGTATTGCTATCTGCAACAG+AGG 0.550363 7.3:-3539408 MS.gene072472:CDS
AAGACTACCTTAGGCCCAAA+GGG 0.550690 7.3:-3543526 MS.gene072472:CDS
GACGGAGGGCGGTGAGTTTG+GGG 0.551049 7.3:+3537403 None:intergenic
AATGACAGCAGGGTGTTGCT+TGG 0.551264 7.3:-3540273 MS.gene072472:CDS
AGAGGAGCTCTTTGCTGATG+CGG 0.551374 7.3:-3541489 MS.gene072472:CDS
ATGAAATATGGAAAGAAGCT+AGG 0.553831 7.3:-3536360 MS.gene072472:CDS
CAATCATGCCATTCACTAGA+GGG 0.554387 7.3:+3533342 None:intergenic
GCCAATCCCAGAACTGAGCA+AGG 0.554706 7.3:+3534559 None:intergenic
GATTGTTAAGAATGAATATG+AGG 0.555225 7.3:-3537650 MS.gene072472:intron
TGAGATTGAAGGAGCCGAGA+AGG 0.556086 7.3:-3541594 MS.gene072472:CDS
TGCTTTGGTAGAGAAGGTTG+TGG 0.556420 7.3:-3543227 MS.gene072472:CDS
GTGGACAACAAAGGAGATGC+TGG 0.557280 7.3:-3543208 MS.gene072472:intron
TCTGGTGAGCGTCTTGAGAA+GGG 0.558557 7.3:+3537337 None:intergenic
CGATTCAAATGTTACTGAAG+AGG 0.559280 7.3:-3535885 MS.gene072472:CDS
GAGTGTTGTTCCAAAGCCAT+TGG 0.559693 7.3:+3530981 None:intergenic
GGAGGAGGAGTGGATTGAGA+GGG 0.564135 7.3:+3537587 None:intergenic
GCATGGTCTTCATAATAGCC+AGG 0.566782 7.3:+3533308 None:intergenic
AGCTGGGTTATCAATGTGAA+GGG 0.569702 7.3:+3543426 None:intergenic
CAAGATGATGAAGTTGGCGA+TGG 0.570613 7.3:-3543373 MS.gene072472:CDS
TCGTAGTGCTTTGGTAGAGA+AGG 0.572237 7.3:-3543233 MS.gene072472:CDS
AAACCTGCAATTATAGTCAT+GGG 0.572960 7.3:+3543277 None:intergenic
TATCGACAACAGAGATCGAT+TGG 0.575433 7.3:-3531856 MS.gene072472:CDS
GCCTGAAATGGTAATGGCAA+AGG 0.576296 7.3:-3540241 MS.gene072472:CDS
CAGCTGGGTTATCAATGTGA+AGG 0.577404 7.3:+3543425 None:intergenic
TGAAGAGATTATGATTGGTG+AGG 0.578048 7.3:-3541342 MS.gene072472:CDS
CTCCCCTGTTTCTCTAGCAA+AGG 0.578494 7.3:-3535398 MS.gene072472:CDS
AATATGGAAAGAAGCTAGGC+CGG 0.579709 7.3:-3536356 MS.gene072472:CDS
AACAGACTCAGGGTTGTCAA+AGG 0.580150 7.3:+3541388 None:intergenic
CGAGCAGAGCCATCCAGCAA+TGG 0.581491 7.3:+3531004 None:intergenic
GAGTCTATCAGTGATCCTCC+AGG 0.581503 7.3:+3542011 None:intergenic
GAGGGGTCAAATTTCCATAA+CGG 0.581522 7.3:+3533360 None:intergenic
TTCAAATGTTACTGAAGAGG+TGG 0.581975 7.3:-3535882 MS.gene072472:CDS
CAAAATTCTCTCACAAGACA+AGG 0.582057 7.3:-3542970 MS.gene072472:CDS
GTATGATACCTGCAAAACTC+GGG 0.582642 7.3:+3533841 None:intergenic
GGAAGAGGTGCAATTGCGGA+TGG 0.583401 7.3:+3537491 None:intergenic
GCATTGGCCAGGAAAACTCC+AGG 0.585369 7.3:-3540210 MS.gene072472:CDS
AATGTTCATGAAGGCCCTCA+AGG 0.587601 7.3:-3533392 MS.gene072472:CDS
TCCCACAAAGCAATGACCAT+TGG 0.589423 7.3:-3543640 None:intergenic
TCTTTCAGTTTGGCAGCACG+AGG 0.589915 7.3:-3535589 MS.gene072472:intron
AGGTTGGAGACATGGTTGAA+CGG 0.592539 7.3:-3539463 MS.gene072472:CDS
TTTGGAGGAAGTCAATACCT+AGG 0.593416 7.3:-3532498 MS.gene072472:CDS
CTGTCATCTATATAGGAACT+GGG 0.594643 7.3:-3533436 MS.gene072472:intron
GTGAACAAGATCATAGGTCA+TGG 0.596754 7.3:-3541554 MS.gene072472:CDS
TAAGACTACCTTAGGCCCAA+AGG 0.597137 7.3:-3543527 MS.gene072472:CDS
GGGGTCGGAGTCGGAATCTG+CGG 0.599428 7.3:+3537422 None:intergenic
TATGATAGCACCATTTGGAC+CGG 0.600597 7.3:+3534015 None:intergenic
GAAGTTACTGTCACTAATGA+CGG 0.601731 7.3:-3543466 MS.gene072472:CDS
ATATCATAACTTGTGCTCCA+AGG 0.603826 7.3:-3539358 MS.gene072472:CDS
ATCTATATAGGAACTGGGCA+TGG 0.605092 7.3:-3533431 MS.gene072472:intron
ATGGCACGACTGACATTACA+CGG 0.605881 7.3:-3533910 MS.gene072472:CDS
CAGAGGAAGTATCCAACCAA+AGG 0.606761 7.3:+3535560 None:intergenic
CAAACCAGCATTATCAGCAA+TGG 0.610258 7.3:+3540131 None:intergenic
CAATCCGAATGCCGAAAGCA+TGG 0.612301 7.3:+3533291 None:intergenic
ACAATCATGCCATTCACTAG+AGG 0.615289 7.3:+3533341 None:intergenic
GGAGAAGAGACGACGGAGGG+CGG 0.615870 7.3:+3537392 None:intergenic
CACTGCCATGGACACAGACA+AGG 0.617081 7.3:-3541666 MS.gene072472:CDS
ACTGGTTGCAAACACTGCCA+TGG 0.617479 7.3:-3541678 MS.gene072472:CDS
AATTGCAGGTTTCCGAATGG+CGG 0.618540 7.3:-3543266 MS.gene072472:CDS
AAACATAAAACTGAGAGCAA+AGG 0.618764 7.3:-3535472 MS.gene072472:CDS
AATGGCTTTGGAACAACACT+CGG 0.619733 7.3:-3530979 MS.gene072472:CDS
TGGCCTTTGCTAGAGAAACA+GGG 0.621317 7.3:+3535395 None:intergenic
GAGGGCGGTGAGTTTGGGGT+CGG 0.624003 7.3:+3537407 None:intergenic
TCAATGCCAACTCTAGCACC+TGG 0.624673 7.3:+3536994 None:intergenic
CGGAGTCGGAATCTGCGGAA+CGG 0.626583 7.3:+3537427 None:intergenic
GTTGGAGACATGGTTGAACG+GGG 0.628503 7.3:-3539461 MS.gene072472:CDS
CAATTGCGGATGGAGAAGAA+AGG 0.628660 7.3:+3537501 None:intergenic
TGTGTATGCATATTTGATTG+TGG 0.629245 7.3:-3535936 MS.gene072472:CDS
CAGACCTGATGAACATTGCA+AGG 0.630815 7.3:-3543007 MS.gene072472:CDS
ACCAGAGAGTTGTAGTACTG+TGG 0.631950 7.3:-3533978 MS.gene072472:CDS
AACCAAGTCAGCAATAGCCA+TGG 0.632695 7.3:+3543549 None:intergenic
GGCCTTTGCTAGAGAAACAG+GGG 0.632956 7.3:+3535396 None:intergenic
GAGAAGGTTGTGGACAACAA+AGG 0.635725 7.3:-3543217 MS.gene072472:CDS
GCCCAAGCTTAACAGACTCA+GGG 0.636349 7.3:+3541378 None:intergenic
CATACACAACAGGTGAATGT+GGG 0.637275 7.3:+3535951 None:intergenic
TAACGGTAACTGATACCTTG+AGG 0.638013 7.3:+3533377 None:intergenic
TATAATTGCAGGTTTCCGAA+TGG 0.638845 7.3:-3543269 MS.gene072472:CDS
TCAGACTGTCAATGACAGCA+GGG 0.640090 7.3:-3540283 MS.gene072472:CDS
TCTCGGCTTCATCAAGAACA+TGG 0.640574 7.3:+3540337 None:intergenic
AACTGGAAGAGGTGCAATTG+CGG 0.640869 7.3:+3537487 None:intergenic
TTGCGGATGGAGAAGAAAGG+AGG 0.641165 7.3:+3537504 None:intergenic
GTTGGGCTTGACTACAGGCA+TGG 0.641820 7.3:-3533544 MS.gene072472:intron
GCTGCATTGAATGTTCATGA+AGG 0.642355 7.3:-3533401 MS.gene072472:CDS
TTTGGAGAAGAGACGACGGA+GGG 0.643472 7.3:+3537389 None:intergenic
CGTCGAAATTGTCATCTCTG+AGG 0.649648 7.3:-3536276 MS.gene072472:CDS
CCGCGCTTGATGAAATTGCG+TGG 0.650905 7.3:-3536213 MS.gene072472:CDS
AGACAGAAATTACCAACGAT+AGG 0.652102 7.3:-3534533 MS.gene072472:CDS
CCTCATTCTGGTGCTCAGCG+CGG 0.652189 7.3:+3540082 None:intergenic
ATGCATCCAGCACAAAACCA+GGG 0.653908 7.3:+3533590 None:intergenic
ATGATTGTTAGCAATGAACC+TGG 0.657588 7.3:-3533326 MS.gene072472:CDS
TACTAGTGAGTGGCTCAATG+AGG 0.661559 7.3:-3537025 MS.gene072472:CDS
CGTTTGGCTCTGGTAACTGG+TGG 0.662358 7.3:-3541425 MS.gene072472:CDS
TGCATCCAGCACAAAACCAG+GGG 0.662714 7.3:+3533591 None:intergenic
TACAATAGCAGCATTAACAG+AGG 0.662984 7.3:+3535543 None:intergenic
ACTAGCTTTGACACGATAAG+CGG 0.665943 7.3:-3534441 MS.gene072472:intron
CCAATCCCAGAACTGAGCAA+GGG 0.665964 7.3:+3534560 None:intergenic
CGGCTTCATCAAGAACATGG+TGG 0.674569 7.3:+3540340 None:intergenic
TTGGAGACATGGTTGAACGG+GGG 0.675738 7.3:-3539460 MS.gene072472:CDS
GGAAGTATCCAACCAAAGGG+CGG 0.677651 7.3:+3535564 None:intergenic
GTTTGGAGAAGAGACGACGG+AGG 0.683087 7.3:+3537388 None:intergenic
TCATAACTTGTGCTCCAAGG+AGG 0.689519 7.3:-3539355 MS.gene072472:CDS
CTGGTTTGGAGAAGAGACGA+CGG 0.689719 7.3:+3537385 None:intergenic
GAGTACCTACTACTAGTGAG+TGG 0.690178 7.3:-3537035 MS.gene072472:CDS
AATCATGCCATTCACTAGAG+GGG 0.692594 7.3:+3533343 None:intergenic
AGGATTTCTGGACAGCAATG+GGG 0.693206 7.3:+3535419 None:intergenic
CCACGCAATTTCATCAAGCG+CGG 0.696747 7.3:+3536213 None:intergenic
CTTTGCTAGAGAAACAGGGG+AGG 0.705484 7.3:+3535399 None:intergenic
AGTCTGAGATAGCACACACA+AGG 0.707210 7.3:+3540299 None:intergenic
GCCAGCCAATACAACAACAG+AGG 0.723732 7.3:+3543345 None:intergenic
ATGTTCTTGATGAAGCCGAG+AGG 0.725787 7.3:-3540335 MS.gene072472:CDS
CAGATTATAAAGAAGCCTGG+AGG 0.728244 7.3:-3542026 MS.gene072472:CDS
GAACTTTAGAAATGTCGACG+AGG 0.762938 7.3:+3543395 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.3 gene 3530955 3543650 3530955 ID=MS.gene072472
chr7.3 mRNA 3530955 3543650 3530955 ID=MS.gene072472.t1;Parent=MS.gene072472
chr7.3 exon 3543209 3543650 3543209 ID=MS.gene072472.t1.exon1;Parent=MS.gene072472.t1
chr7.3 CDS 3543209 3543650 3543209 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3542926 3543041 3542926 ID=MS.gene072472.t1.exon2;Parent=MS.gene072472.t1
chr7.3 CDS 3542926 3543041 3542926 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3541996 3542072 3541996 ID=MS.gene072472.t1.exon3;Parent=MS.gene072472.t1
chr7.3 CDS 3541996 3542072 3541996 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3541275 3541760 3541275 ID=MS.gene072472.t1.exon4;Parent=MS.gene072472.t1
chr7.3 CDS 3541275 3541760 3541275 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3540047 3540362 3540047 ID=MS.gene072472.t1.exon5;Parent=MS.gene072472.t1
chr7.3 CDS 3540047 3540362 3540047 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3539341 3539483 3539341 ID=MS.gene072472.t1.exon6;Parent=MS.gene072472.t1
chr7.3 CDS 3539341 3539483 3539341 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3537263 3537662 3537263 ID=MS.gene072472.t1.exon7;Parent=MS.gene072472.t1
chr7.3 CDS 3537263 3537662 3537263 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3536990 3537109 3536990 ID=MS.gene072472.t1.exon8;Parent=MS.gene072472.t1
chr7.3 CDS 3536990 3537109 3536990 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3536201 3536476 3536201 ID=MS.gene072472.t1.exon9;Parent=MS.gene072472.t1
chr7.3 CDS 3536201 3536476 3536201 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3535815 3535987 3535815 ID=MS.gene072472.t1.exon10;Parent=MS.gene072472.t1
chr7.3 CDS 3535815 3535987 3535815 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3535349 3535603 3535349 ID=MS.gene072472.t1.exon11;Parent=MS.gene072472.t1
chr7.3 CDS 3535349 3535603 3535349 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3534442 3534593 3534442 ID=MS.gene072472.t1.exon12;Parent=MS.gene072472.t1
chr7.3 CDS 3534442 3534593 3534442 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3533850 3534040 3533850 ID=MS.gene072472.t1.exon13;Parent=MS.gene072472.t1
chr7.3 CDS 3533850 3534040 3533850 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3533545 3533653 3533545 ID=MS.gene072472.t1.exon14;Parent=MS.gene072472.t1
chr7.3 CDS 3533545 3533653 3533545 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3533289 3533443 3533289 ID=MS.gene072472.t1.exon15;Parent=MS.gene072472.t1
chr7.3 CDS 3533289 3533443 3533289 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3532467 3532559 3532467 ID=MS.gene072472.t1.exon16;Parent=MS.gene072472.t1
chr7.3 CDS 3532467 3532559 3532467 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3531823 3531903 3531823 ID=MS.gene072472.t1.exon17;Parent=MS.gene072472.t1
chr7.3 CDS 3531823 3531903 3531823 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
chr7.3 exon 3530955 3531032 3530955 ID=MS.gene072472.t1.exon18;Parent=MS.gene072472.t1
chr7.3 CDS 3530955 3531032 3530955 ID=cds.MS.gene072472.t1;Parent=MS.gene072472.t1
Gene Sequence

>MS.gene072472

ATGACCATTGGTAATATTTTTAAAGATGAAGCCAGCGAAGAGAAAGGAGAGAGAGCAAGAATGTCATCTTTTGTTGGGGCCATGGCTATTGCTGACTTGGTTAAGACTACCTTAGGCCCAAAGGGAATGGATAAAATTTTGCAGTCAACAGGTAGAGGCCGTGAAGTTACTGTCACTAATGACGGTGCTACAATCTTGAAGTCCCTTCACATTGATAACCCAGCTGCTAAAGTCCTCGTCGACATTTCTAAAGTTCAAGATGATGAAGTTGGCGATGGAACTACCTCTGTTGTTGTATTGGCTGGCGAACTTTTAAGGGAAGCAGAAAAGCTCGTTGCAGCTAAAATTCATCCCATGACTATAATTGCAGGTTTCCGAATGGCGGCTGAGTGTGCTCGTAGTGCTTTGGTAGAGAAGGTTGTGGACAACAAAGGAGATGCTGGTATGCTTACTTTCCCTTTTGCATGTTTCCTTTTGGATTAGGTTTTACCATTGGCTCTGAATACTTTGTTATCATTAGAATTGTTATTATCATTTTGTTTACAGCATGGTTAGATATTAAAGCATTCTTTTGTCGTATCTTATGCATGAACTTACTTGGTTTTGCAGAGAAATTCAGGTCAGACCTGATGAACATTGCAAGGACTACTTTGAGCTCCAAAATTCTCTCACAAGACAAGGAGCATTTTGCTAAATTAGCTGTAGATGCTGTAATGAGATTAAAGGTGAACAGTCACTACCCTACTAATACAGAGTTCCATTTTTGGGGATTTAGCTAATAGTGCATGCATTGTCGCCATGATTTCTCCATAGTGTATGCATTGTTGCCATGTTTTCTCCATTGGTCCAACTGTGGAAAAACTATTGGCTTATTTTTGAGCTTATGCAAATAAATAAGATCTTATGTATTATTTATCCATAAGCTTGTCGAGGTAGTTTATGAAAAAACAGCACATGAAGATACAGTTTTTCGTTAGTGAGAACTTATGAATTAACATAAAAGCTTATTTATTTTCATAAGATATTCTTCATAAGCTATAAAATAAGTCGATCCAAACAGGCCCAAAAATTAGTTACAAATTTGATCTATATACTTTTCTGCATGCTTTGGCTAATAAATACTTTAAATTTTATTTTATTTAGAAGTTTGGTTACAATGTTTTATATGATCCTGTAGTTTATAATCCATTCTTATGATGTGAGTATAACCTTTCAATTTCTTTCCAATCCTTAAAAAACAGTTTTTTGAGTTTTCTAATATAATTTCATGATAGCTTGTTCGAGCCTTGAATGCTCCATAAAAAATATTCACTGAAATAACGGGTTCAACTAGGTTATATTTTTGGCAGGTTATAGCAGTATTTCATTTGTGGGGATGGTTTTTCCTTTTCTCCCTAATGGTTTAAAAGTACACAATGTTCTGGTTTTCATTCTATACAGTTTATTCATTTTTTTGTACTTCTGTGCTAGCGGCCTAGCCATGCATCAGGATTTTTTTTTCTTTCCCATAGTGATCTCTATTATTATGAAATTAACTATATGCATTTTCACATTTTAATTTCCTTTTTTAAATTACAGGGAAGCACAAATTTAGAATCTGTCCAGATTATAAAGAAGCCTGGAGGATCACTGATAGACTCATTTTTAGATGAAGGGTAATATCGCTGAGTAGTTCCACATTTTTTAGTTTGAGTATCAAATGATTCTATTCTATCTTTTTTTAAATCCTGGGGTTTTTCTTTTGTATTGAGTTGCATAGGTAGCCTTCAAGTAACTTGAATAAACTCAAATGATCTCCAACTTCACCACTACCTGTATAATGAACTATTTACATTAGTCTTGGTAAAAAATAATATCTCTGTTTCTAAATTGGATTATACTTTGGTTTAGATTTATTCTTGACAAGAAAATTGGTCTCGGACAACCCAAACGCATAGAGAATGCAAAGATACTGGTTGCAAACACTGCCATGGACACAGACAAGGTGAAGATATACGGAGCTCGTGTTCGTGTTGACTCTATGGCTAAAGTTGCTGAGATTGAAGGAGCCGAGAAGGAGAAAATGAAAGAAAAGGTGAACAAGATCATAGGTCATGGCATCAACTGTTTTGTTAACAGACAATTGATCTACAATTTTCCAGAGGAGCTCTTTGCTGATGCGGGAATACTTGCTATTGAACATGCTGATTTTGATGGTATTGAGCGTTTGGCTCTGGTAACTGGTGGTGAAATCGCGTCAACCTTTGACAACCCTGAGTCTGTTAAGCTTGGGCAGTGTGAACTTATTGAAGAGATTATGATTGGTGAGGATAAATTGATTAAGTTTTCTGGTGTTGCAATGGGGCAGGCATGTACAATAGTTTTGAGAGGTGCTAGGTACTTTTTCTTCTTTTGTTATTTTAAATTCCTTTCTGACGTTCTTTTACATATTCAGGGATTATAATCTTGATACCATATAACTTCAGATCATTTTTCTTTTAGGCTTTGTTTGGAAGGGAGGGCAAGCGAGGTTTTTTTTTTTTTTTTTTTTGGGGGGCGGGGTGAGAAATATAAAGTGGATAAATCTTTCACAATTTTTTGAAAGAGCAATTTTTAGATTGAATTTAAAAAATCCAACACACAGGAAAAAAAAAAAATCCTCCAATACAATTTTTGGGTTCCCCCTAATGAGAGGGATTTTGTATTATGAATTAAAATTAACCCCCAAAGTCCTCTCCTCCGGTCCTCCCAATGTCTTCTATTTTTTCCACTTGCTCCTTCCTATTTTCCTAAACCCTCCTCTCCCCTCCAAACTCCCAAACAAAGCCTAAGGTTTTCTTATTCTAGCAGTATTTGTTTGTAATATTTCACTATTTATTCATGATATTAGTATTTCATAGGAATTGCTTAATACAAATGACCCTTTTATTCAGTTTCAGTTCTGGTTTATTAAAGGTTAATGTATAGGATTCTAATTTTTATTTGTTTGTTTAAAATATTTTATATTTAATAAATTGCAGCTAATAATTATTAAGTCCAATGATTTAACTGGACTGCTGAAATGTTGGATTTTTTTTTTTTTTTGACAAATGCTGGAATGTTGGACATTAATTGCTTTCATGCAAACTTAGTTTATGCCCTTATATTTATGTTGCCCCGCTCCTTACCATTTATTATGCTTCAGTCAGTGCCTTTGAGTGGTACATGTATGGACTTCCTTGTATGTATCAGTAGACAGCTGTTTTTTAACAAATTTGATGGGCAGTTTTTTAGTTGCACTTTCAGCCTTGACGTCTGTTTTTGTGGCAGCCACCATGTTCTTGATGAAGCCGAGAGGTCATTGCATGATGCCTTGTGTGTGCTATCTCAGACTGTCAATGACAGCAGGGTGTTGCTTGGAGGCGGGTGGCCTGAAATGGTAATGGCAAAGGAAATTGATGCATTGGCCAGGAAAACTCCAGGAAAAAAGTCTCTTGCAATGGAGGCATTTTCTCGGGCTCTCTTGGCTATACCAACAACCATTGCTGATAATGCTGGTTTGGACAGTGCTGAGTTGATTTCTCGGCTCCGCGCTGAGCACCAGAATGAGGGATGTACTGCTGGAATTGATGTCATCTCTGGTTCTGTAAGTATAAAACAGATAATTGCGTGGATTTATTTGAGTGTGCATAATTTTGAAACGCTGCATCTTAATATATCATTCCATAATCTTTTTCTTGGTAGAAGTTCTGTTTCTGATCACTGCATTCACTCTGGTCATATCTTAGTAACTTCAGCATATAACATGAAATGTTTAATTAAAATTTGCAACATAAGTTTGTATTTTGTTTCATGGTGTCATTTCTAAATTAGATTGACTCCCTAGTGAACATGGTGGAGTTAGGATGTGTATGATAGGGACTTTGGTATCATGCGGAGCCTAAGTCCCGCATTGAATAATATGAGATGCTTGATGGAGTACCCAAGTGACTTGGTTCTTCGTCTTCTCTCATGACAACCAGATTTTAAGGAGTGCTTGAGTGTGTATCAGTGTGCAATTTATTAACTGAGTAATGAGTACATGTAACAGTGATTTTATTAAGTTCATGTTGTATTTTAAAAACGTATCCTGTAGGCTGCTAGCTCAACTTGGTTCCATTACATTTTCTGTTTGTCTTATATACTTCGACCGGTGTGTACTTCTGGTAGGTTGGAGACATGGTTGAACGGGGGATTTGTGAAGCATTCAAAGTCAAGCAGGCTGTATTGCTATCTGCAACAGAGGCAGCTGAGATGATCCTTAGAGTTGATGATATCATAACTTGTGCTCCAAGGAGGAGAGAAGACAGAATGTAAAATCTAGTGATCATCGAACTTCAGATGGGGAATTCCCGACTTATTCCAAAAATTTGCAATGTGGGTCAGCAACCAAAAGAATCATCATAGAATTGGTGCTCTTAACAGTTTAAATCAAGTGGTCACAATTGAACTTTTTATGTGCTTGTTTAAATTTTGATTATTGTTATGTGCATTTCCAGTTTCACCAAAAATTGGAATTTTGATCATGTCTTTAATGTGTGTATTAGTCTAGCTGCGAATTGGAATCTTACTATCTGAATCCTCAACGGTTGTACTAGGTGTTTAGTTTTGATATATTGTTTGAATGTTAGTGTAAGCTTTTTAAAATATCATATGATGTGCTGTCAAGGATTTAATTTGTTTACGGGGTAAAACTTTTTTATACAGACATTCACTTAAACAGCTAGATTTTTTTTAGAAAAAATCAGCTGGTGTTCCTTATAATAAAAAGGTTTCTTCTAGATAGTTTTTCAGTCCTCACAAGTTTATGTATCTGGAGTTCCTTATATGCTCAAGTCAATTGTCAAACAACTTCTGTCCTGCCATTGAATAACCAATCAGGTTTTACGTCCGAATATCATGACGCATTTGAAATTTATATATATATATATATATATATTAGAAAGCCATAGATCGAGCCTTGTTTCAGTCACACATTAATTTCACCTTGTTATATATACTTAAACAGCATTTACAAATGCATAAATATGCTTATCGGAAAAAAAATGCGTAAATAGATTAACATAGGCCTTAAAAAAAATACTTCCTCCTGTCACTATTATAAGCAAAATTTCACTTTTTAAATACATTGAATAATTTTAATGTATCTAGGGAGTAGAAAATACAATGACTTTAAAATTGAAGAATTAAAATCATAGATTTTTTTTTGGTAGTGCCTGGGGTTTGAATTACAGACTATATATTTTATGCATCGTCCCAACCAACTGAGTTAAGCTCACGGGGACTAAAATCATAGATTTAAAATAGGGTTCCATGGTTCAAAAATGTAAATAAGTTAAAATAGAAAGGAAATTTTTTTAAACCTAAAATATTATTTTAGAACAATAAAAGAAGAAAAAAAAAAAAAAAAAAGAACGCAGTTAAGATGAAATTACAGTTACACAAAACCAAATAAACACAAAAAAAAAATAAAATAAAATAAAAACACTGAACAATACGAGTTAAGATTACCTTCGCTCTTATAACACAAAATTAAGTTTAATGTGGATGAACTGATAAGATTTATTTTTGTACTCGAATAAGATTGTCTTTGGCAATCCGCAAGTCCTAGCTCAACTGACAAAATGCAGAACAGAAATTGTTAGGTTGGATGCTATGACCGGGGTTCGAACCTGGTACCTCCACTTGCGTGTGTGAGTTTATAATGGTTTTGCTATTTCGTCTATCGCGTGTGTGAGTTTATAATGGTTTTGCCATTTCGTCTATCTACGGAAAAAAAAAAAGATTGTCTTTGGCAAACGACAAATTATGTCTAAGCTTAATATCCTTCAACAAAAAAAAAATCCTTCTTGGTTAACAAGAAGTTTATGTACGCAAACGCAACACACTTGGATTAATCTCTGCGCAGACTATATCCAATTTAAAAGAAGGAAAAAAAAAAGTATTTGTTGTATCTGTATTCATTGATTACCTTACCCATTGATTGTTAAGAATGAATATGAGGTCGCTGTCATCATCATCACCTGCAACTGTAACAAAACTCGCCCTCTCAATCCACTCCTCCTCCTCCTTCCTCAATCTCAATCTCAATCTCAATCCATTTTTCAAATCCAATAAACATAACAAACCTCCTTTCTTCTCCATCCGCAATTGCACCTCTTCCAGTTCCATTTCCGCAAAACCATCTTCTCAACTCCGTAAAAACCGTTCCGCAGATTCCGACTCCGACCCCAAACTCACCGCCCTCCGTCGTCTCTTCTCCAAACCAGATGTCTCCATTGACGCTTACATTATCCCTTCTCAAGACGCTCACCAGAGCGAGTTCATCGCTGAATGTTACGGTAGAAGACAATACATATCTGGTTTTACTGGCAGTGCTGGAACTGCTGTTGTTACCAACGATAAAGCCGCTCTTTGGACTGATGGTCGCTACTTTCTCCAGGTTCGTTTTTTTTTTTTTTTTTGAATAAAACACGGACACCTGACTCGACACTGCCACACAGAGTTGTTAATTCATTTCACATTATGATTTCATTCATTGCAGGCAGAGAAGCAACTGAACTCCAATTGGATTCTCATGCGTGCTGGAAATCCAGGAGTACCTACTACTAGTGAGTGGCTCAATGAGGTTTTGGCGCCAGGTGCTAGAGTTGGCATTGATCCTGTTAGTAATTACTAATCACCACGCAACTTAACTCTTATTTTCTACCTTCATTTTACCATTTAGCCTCTCTTTCCAATACTTTCTTTGAATTGACTTATTTGAGCTTATGGTAGTCATAATTGCTTACGACGTGTCCATATACACTGTTTTTCAGCTTATTTCCATAAGCTATTCAGGATAAAGTATATAAACAACTTACAGCTTATATACACACAATCTGACATTATTTTATCTTTTGTTATAGGAATAGATCACACACGAGCATTTATATGATAAGCGTTTGTGCTATAAGCGCTTAATTAAGCTGTTTATACAAGCAGGACCTAAGTAGATTATCTTTTCTAATTGGTAATATCAATCCTAAACATCCTGTTGAAGTGTTCTGTTTGTACTCCTAGTAACCTGAAATCCTAAACCAATTAAAACCATATTTTCTCCCTTTTCCTTGTGTTATTGCATTTTTTTTTTACAGTGCCTGACAGGGTGTTATGTTCTGTATTGTTAAGGAGGCAGTTTCTTTTTACTTCGGATGCTGCTGAAGAACTTAAACATGTTATCTCTAAGAAAAACCATGAGCTCGTTTATTTGTACAATTCAAATCTTGTGGATGAAATATGGAAAGAAGCTAGGCCGGAGCCTCCAAATAAGCCTGTTAGAGTGCATGACCTAAAGTATTCTGGTTTAGATGTTGCGTCGAAATTGTCATCTCTGAGGTCTGAACTTGTTCAGGCTGGTTCATCTGCAATTATTGTCTCCGCGCTTGATGAAATTGCGTGGTTGTTGAACTTGGTAATGCATCTCAACAAACAACACCTTCTTTTAACTTGTTGTACTGACAGATATTTGTATACAATCATATATCCTTGTAAACCATCATTCAGGATCTTATTCAAGTTGCTTGGGTCTAACATGAGTAGTTCATTGATTTCTTTTTCCCCCCCTCTGTTTTTCACTGTTGATGATTTAATCAGTGAGAGTAACTTTTCCCCTTTTTCTTTGAAGAGAGGCAGTGATATCCCACATTCACCTGTTGTGTATGCATATTTGATTGTGGAGATTGATGGAGCTAAGTTATTTATTGACGATTCAAATGTTACTGAAGAGGTGGATGACCACTTGAAGAAAGCAAACATAGAGATCAGGCCATACAATTCGATTGTATCCGAGATTGAAAAGTAATTATGGAAATCTTATTTATTTTTTTATTATTTCACGACCCTTCCATTTTTCATATTTTTTAGTGGAAATGTCCAAGAAGGGTACAGTAGATAGGCCAAAATGTTTTTATTTTTAAAAACAGTAGCTTTCGCTCTTTCGCTTTTTTATGCTTAATTATTTTGTTTGTAAAAGCAGCGCTGTTTGAAACTGAGCTTGATTTTCTTTCAGTTTGGCAGCACGAGGTGCCGCCCTTTGGTTGGATACTTCCTCTGTTAATGCTGCTATTGTAAATGCCTATAAAGCTGCATGCGACAGATGTTATCAGAACTATGAGAGTAAACATAAAACTGAGAGCAAAGGTTTTGACAGATCAATTGCGAACTCAGATGTCCCCATTGCTGTCCAGAAATCCTCCCCTGTTTCTCTAGCAAAGGCCATAAAAAATGAAACGGAGCTGAAAGGAATGCAAGATTGTCATTTAAGGTGACCATAACTTACCTTGACAAGGATTACTCACAATGTTTTTCCATGTTTTGATTTCTATATTTTGATGATCTCTTTTAAGTTGGAGTGATTGTAAATACAGAAACCACAGATTATATAGATGAGCTATGCATTAGACTCTCAGTTTCAGTTATTAAAAAATTGGTATCTGGTTTTGGAAAATTATGACAGAACATGTGGTCAACTAAGCTAACACTTACCTTTTATTTGTCAAAACATCATTTTTCCAGGGTAGGTGGGGGTTTGTTGTCTTCCTTTATTTTGCAAATGGTAGTTGGTTAATATTTGCTTTACCGTTTTAATGAAACACGTTTGTTACATTTAAAAGAGTTACTTAGGGTGTGTTTGGATGGAGGGTTTAGGAGGGGAAGAGAGGGGAGGGCTTACTTTTCTTGTTTAAATTATTGACATTATAAAATGATTTTTAGAAAATTGAATTAACAACATGATAAATGATCATATAATACTTCAAAAACACTTGATTTATTTTATAAAAACATTTTACATTGTTTGTAATTTAAAAAATAAAAGTGAGCCCTCCCCTCCCTCCCCCTCCTAAACCCTCAATCCAAACACACCCTTACTGTTTTGGCTGATAGCTGAATTTTTTCTTCTTTCCCCTGTTGACCATTCATAAACATTTGATAAGAGTGTTTAATCTATGTATAGAAGAGTCCACATTGAAACTTGCTTTTTGTAGTTTATATACAACTGTTTTATCTTATTGTTTGCAGGGATGCTGCTGCCCTTGCTCAGTTCTGGGATTGGCTAGAGACAGAAATTACCAACGATAGGATATCAACAGAAGTAGAAGTTTCAGACAAACTTCTCGAGTTTCGCTCAAAACAAGCTGGTTTCTTGGATACTAGCTTTGACACGATAAGCGGTACTGTAGTACATTGACAAAACTTTTCTATTTTTTCACTCAAAAATTGGCTGAAGAAACATAAAAAGATACAACTATGTCTTTTTTTCGAAAGACTGGCTTAACAGCCAATTATTCCAGGGAATATTACAAAAAAGCATCACATGCTAAAAATATGGACAGTGAATGAAAACAATTTAGTGATTCTGTGTAAAAAAGTTGTAAGAAGTCTATAAAAATATGCTACTGTTATTCCATTATTATGACACATGTTTACCCATAGTTCTGTTCTAGTGTTTTCAGTATCTTCTTACGCGCTTCTTTTATTGTAGCTAAACAGATAGATATTAGATCGACAGATATAACCTTTGGTCCAACTCATCTTCCCCTAGACCTATAATCTATTCATTTTATCGGTTCAGGTTCCGGTCCAAATGGTGCTATCATACACTACAAACCAGAACCAGAGAGTTGTAGTACTGTGGATGCCAATAAATTATTCTTATTGGATAGTGGTGCTCAATATGTTGATGGCACGACTGACATTACACGGACAGTTCATTTTGGCAAGCCAACAACTAGAGAGAAAGAGTGTTTCACCCGAGTTTTGCAGGTATCATACTTTTATAATTTTTCTTGAGTTTCTTGTACAATTTTTTCTGGAGTTGATTTCTTCATTTTGTTCATTAGTTTTCCTTACAAGTCAATCATGCAAATGTATACCTTTTTTTTTTCAATGTTAACACCTGAGTTCTAGCAATCTTACTTTCTTGAATAATTGTTTGTCTCAACACATATCTAATTGCCAGGGTCATATAGCTCTTGATCAGGCAGTCTTCCCGGAAGATACCCCTGGTTTTGTGCTGGATGCATTTGCACGATCCTTTCTTTGGAAAGTTGGGCTTGACTACAGGCATGGTATATTTTTGCTTCCAGTGGTGGGATGTTTTTCATTTACTTATAATCAAAATGAGTTTATTGGTTGACTGAGCATTTGTGCGTAACTGTCATCTATATAGGAACTGGGCATGGTGTAGGAGCTGCATTGAATGTTCATGAAGGCCCTCAAGGTATCAGTTACCGTTATGGAAATTTGACCCCTCTAGTGAATGGCATGATTGTTAGCAATGAACCTGGCTATTATGAAGACCATGCTTTCGGCATTCGGATTGAGGTAATATTCTCTTCAGCTATCTGACATGCTCTGAAATGTTAACTCTGGCTTCCAGTTTTGTTCAACTAGTTTTATTGTGTGTTATTATAGCCATATTTACTTTATCTCCTTCATAAAGCCAATCCTATACACCAATTATATGTGGGAAAAATTCAAGCTGAATTTCTGATTAAATACGAGGTTTTTGAGATCTGTTTAAATTTGATAACTATTTCTAGAGTTCCTCGCTGGTTAATATGCTCGGTTTCAACTTATATGCATGGTTTGAAAAACCTTCCACGAGTCATGAGTGTCTTAAGAGGCTTTCCATGAATTACTTGATTCAATATCTTCATATATTTCAACATTCTTAGTATCACTTATCTGTGAACAGAAGTGCCCAGATACCATCCTACTTGATCACCAAGTTTGTATACGTTGGAAATTCCGCCTTCAATGCGGCCCACAACTAGCTGCCTAATTGAATCATTTGGGTTGCCTTCATCGCAGCCTCCAACACGTTCCTTGTGTTGGGTGTGAAGGGGTAGGTTTAGTCCAACATTGCCTAGAGATATAGCACGTGTAGTGTTTATAAAGAGAGACACCCATCACCTTAAAAGCCGGTTTTGCCCAACCAAAAATTCTGAGAGTATATTACGTTGTTTTTCCTTCTTTTCTGCCAAACTGTGGGGATAATATTTGTCAGTCCTATTATGGATTGCATAATGATGTCAGTATTTTAACTTGCAGAATCTACTGTATGTGAAAAATGTTGAGACACCAAATCGTTTTGGAGGAAGTCAATACCTAGGATTTGAAAAGCTTACATACGTGCCCATTCAGGTATGCCAATGGCTGTCAATCACCCTGGTCCGATATATATTCTGTTAGTGTTTTTTTTCTTTTCTCTGTTTTTTTTTTTTTTTTTTTGCAAAATTAAACCCCTGTTCGTAGTTCAACATGAGGAATTGAGAATGTTTATTGGTTGCAAGTCCTTTTTCTTAAGTAGGGATCTGGGACTGACTTGGTCCAACAGAAGTTCTCTAGGCCCATTTAGAGTGTTTGAAAGAATTTATTTTCCTTATCTTATGACATAAACAATTGTTAGGTATTTGGAAGAGCCTATGAAAATAGCTCGTGATATTGTGTACTTAAGTTGTTTTCAACTTATTAGAACTAATCTATTTTCTGTCTCTACCTCTGAAAGTATTTGAAACTTTACCAATGAAAATTGGATGCTCATTCCATTTTAAAGCATGCTATATTTTAAATATATTTCCAAAGGATCTGATGTGTTACTTTCAGGTTTCATTCAGTCCCCTTAGTTTTTCCTGAAATTTCAGAATGATTTGTTTAAGCCATATATTCTTTCACACACTCATTTGTAACCTGGGCATAACTTGCAGATAAAATTGGTCGCTGTGTCTCTGCTATCGACAACAGAGATCGATTGGCTTAACAACTACCACTCAGTAGTATGGGAAAAGGTATTTTGCTCTGTTTGTTGCATTGCATGCCTTTTTTCTTTCTTTTGATTCTCTTTTTCCCTATCTTTTACACGTCTCCATGAAGTAATAGAAATTCATCTGGATGTGCTTTTGTAACCACCTCCTTATTCTTCCGTTTCTTTAAAATATAAAATTTGATCACACTCTTACTCGGCAATTTAAGATCATCAAAACATCATGTAGTATAATTGCTTTTATCTCCTCCGACCATCCTCTCTCTTTGGCATGTCCATGGAACCACCCTTTACCCCAAATGAACAACAAAAGGGCCCTGCATCGTGCAGTATGGCCATCCCCTGATACGAGATTGGGCTAAGTTCTTCAATTGGGCTCCATAATTCACGACCAAAATGGAGAAGAAGTTTCCTTTTTGGAGGACTGAATACAACCAAGAGTTTTCACCTCTTGCATATGCCAAATTTTAGGATTACTTTTCTATTAGACATTTCTATTTCATGCTAGATTTCCTTTTCTGTTGTTAAATCATTCTTCTCTTATATGCCATGTAACGGTCATAGGCTAGGTGGCACCATGGCAGTATATCCACCTGTGTAGCGGATTATCATGACTATAAACCTTTCGTAGGGCACATAAACTTTTTTCCCTTGTTTTCCCTGCTTCCTTAATTTTTCCCTTGCTCAAAAAGGATTCTTTCATTGCCTTACTCCGAGCTGCTGCTTTTCCTTTTAAAAATAGAAACTCACTAAAAATTTATAATTTGTAATCCTGTATGGTCGATTGTTTTATAACTACTTTGATGCATCCACAGGTTTCACCATTGCTGGATGGCTCTGCTCGCCAATGGCTTTGGAACAACACTCGGCCTATCATCAGTGAAACAGTTTAA

Protein sequence

>MS.gene072472.t1

MTIGNIFKDEASEEKGERARMSSFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIIAGFRMAAECARSALVEKVVDNKGDAEKFRSDLMNIARTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESVQIIKKPGGSLIDSFLDEGFILDKKIGLGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEGAEKEKMKEKVNKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGQCELIEEIMIGEDKLIKFSGVAMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLLGGGWPEMVMAKEIDALARKTPGKKSLAMEAFSRALLAIPTTIADNAGLDSAELISRLRAEHQNEGCTAGIDVISGSVGDMVERGICEAFKVKQAVLLSATEAAEMILRVDDIITCAPRRREDRIMNMRSLSSSSPATVTKLALSIHSSSSFLNLNLNLNPFFKSNKHNKPPFFSIRNCTSSSSISAKPSSQLRKNRSADSDSDPKLTALRRLFSKPDVSIDAYIIPSQDAHQSEFIAECYGRRQYISGFTGSAGTAVAEKQLNSNWILMRAGNPGVPTTSEWLNEVLAPGARVGIDPFLFTSDAAEELKHVISKKNHELVYLYNSNLVDEIWKEARPEPPNKPVRVHDLKYSGLDVASKLSSLRSELVQAGSSAIIVSALDEIAWLLNLRGSDIPHSPVVYAYLIVEIDGAKLFIDDSNVTEEVDDHLKKANIEIRPYNSIVSEIENLAARGAALWLDTSSVNAAIVNAYKAACDRCYQNYESKHKTESKGFDRSIANSDVPIAVQKSSPVSLAKAIKNETELKGMQDCHLRDAAALAQFWDWLETEITNDRISTEVEVSDKLLEFRSKQAGFLDTSFDTISGSGPNGAIIHYKPEPESCSTVDANKLFLLDSGAQYVDGTTDITRTVHFGKPTTREKECFTRVLQGHIALDQAVFPEDTPGFVLDAFARSFLWKVGLDYRHGTGHGVGAALNVHEGPQGISYRYGNLTPLVNGMIVSNEPGYYEDHAFGIRIENLLYVKNVETPNRFGGSQYLGFEKLTYVPIQIKLVAVSLLSTTEIDWLNNYHSVVWEKVSPLLDGSARQWLWNNTRPIISETV