AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29338

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29338.t1 MTR_7g113480 91.725 713 39 2 528 1220 1 713 0.0 1332
MS.gene29338.t1 MTR_7g113480 91.390 662 37 2 528 1169 1 662 0.0 1228
MS.gene29338.t1 MTR_7g113480 91.429 630 34 2 528 1137 1 630 0.0 1165
MS.gene29338.t1 MTR_7g113480 96.357 549 20 0 672 1220 1 549 0.0 1107
MS.gene29338.t1 MTR_7g113470 99.431 527 3 0 1 527 1 527 0.0 1060
MS.gene29338.t1 MTR_7g113480 96.154 520 20 0 701 1220 17 536 0.0 1046
MS.gene29338.t1 MTR_7g067470 97.533 527 13 0 1 527 1 527 0.0 1038
MS.gene29338.t1 MTR_5g019600 41.150 661 323 12 609 1215 5 653 6.40e-156 482
MS.gene29338.t1 MTR_5g087560 36.031 519 321 6 6 516 11 526 3.61e-93 311
MS.gene29338.t1 MTR_8g088270 35.424 542 316 11 1 516 1 534 2.82e-86 291
MS.gene29338.t1 MTR_3g109925 34.816 517 318 7 14 517 20 530 8.92e-81 275
MS.gene29338.t1 MTR_3g086330 33.525 522 333 8 6 517 14 531 1.11e-78 270
MS.gene29338.t1 MTR_5g019600 35.699 465 234 11 609 1019 5 458 8.30e-76 259
MS.gene29338.t1 MTR_3g109925 31.961 510 285 7 14 517 20 473 5.02e-65 229
MS.gene29338.t1 MTR_2g013540 29.699 532 352 12 6 523 7 530 1.16e-59 216
MS.gene29338.t1 MTR_7g406870 29.903 515 339 8 26 524 25 533 1.61e-58 211
MS.gene29338.t1 MTR_6g032870 28.715 498 342 8 30 520 33 524 1.13e-48 182
MS.gene29338.t1 MTR_1g030650 28.112 498 345 8 30 520 36 527 1.56e-48 182
MS.gene29338.t1 MTR_7g406870 28.297 417 279 7 116 516 1 413 5.56e-38 148
MS.gene29338.t1 MTR_8g105970 31.757 296 175 9 189 478 75 349 2.23e-33 133
MS.gene29338.t1 MTR_3g465910 84.337 83 10 1 379 458 453 535 2.02e-32 134
MS.gene29338.t1 MTR_2g013540 25.781 384 268 8 154 523 1 381 1.37e-28 120
MS.gene29338.t1 MTR_3g466600 88.235 51 6 0 431 481 1 51 2.01e-23 95.1
MS.gene29338.t1 MTR_3g465900 76.786 56 12 1 483 537 1 56 2.43e-18 85.5
MS.gene29338.t1 MTR_1g090140 24.429 569 325 22 16 525 40 562 6.81e-14 76.6
MS.gene29338.t1 MTR_8g017080 24.015 533 326 17 16 502 41 540 1.04e-12 72.8
MS.gene29338.t1 MTR_1g090130 23.310 562 340 20 16 525 40 562 1.07e-12 72.8
MS.gene29338.t1 MTR_0991s0010 37.273 110 63 2 26 131 65 172 1.84e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29338.t1 AT3G05350 68.696 690 191 4 544 1215 25 707 0.0 983
MS.gene29338.t1 AT5G20890 88.046 527 63 0 1 527 1 527 0.0 929
MS.gene29338.t1 AT4G36760 39.970 658 323 10 609 1215 5 641 4.60e-161 495
MS.gene29338.t1 AT4G36760 39.970 658 323 10 609 1215 5 641 1.11e-160 494
MS.gene29338.t1 AT4G36760 39.970 658 323 10 609 1215 5 641 1.23e-160 494
MS.gene29338.t1 AT3G20050 35.294 527 310 9 14 516 15 534 1.15e-90 303
MS.gene29338.t1 AT3G11830 36.031 519 321 6 6 516 11 526 1.62e-89 300
MS.gene29338.t1 AT3G11830 35.838 519 320 7 6 516 11 524 2.53e-87 294
MS.gene29338.t1 AT3G18190 35.397 517 315 8 14 517 24 534 6.07e-84 284
MS.gene29338.t1 AT1G24510 33.015 524 327 9 8 517 18 531 5.90e-78 268
MS.gene29338.t1 AT1G24510 32.632 475 298 8 57 517 12 478 2.51e-67 236
MS.gene29338.t1 AT1G24510 31.965 463 293 8 69 517 1 455 3.47e-62 220
MS.gene29338.t1 AT3G02530 30.309 518 331 11 27 524 26 533 9.75e-59 212
MS.gene29338.t1 AT5G16070 31.094 521 322 15 27 524 26 532 4.04e-58 211
MS.gene29338.t1 AT5G26360 29.135 532 355 11 6 523 7 530 8.18e-55 201
MS.gene29338.t1 AT3G03960 29.116 498 340 9 30 520 39 530 2.79e-48 182
MS.gene29338.t1 AT3G23990 24.820 556 331 20 16 521 39 557 3.03e-16 84.3
MS.gene29338.t1 AT2G33210 24.643 560 329 23 16 522 40 559 3.29e-16 84.0
MS.gene29338.t1 AT2G33210 23.551 552 340 20 16 522 40 554 4.40e-15 80.5

Find 283 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCAATAAATTATTCTTAT+TGG 0.138070 7.2:-3765270 MS.gene29338:CDS
CTGCTGCCCTTGCTCAGTTC+TGG 0.152105 7.2:-3765882 MS.gene29338:CDS
GAGAAACAGGGGAGGATTTC+TGG 0.171633 7.2:+3766723 None:intergenic
AGGAGGTTTGTTATGTTTAT+TGG 0.178219 7.2:+3768833 None:intergenic
ATCATCAGTGAAACAGTTTA+AGG 0.178580 7.2:-3762269 None:intergenic
TCCTTTGCCATTACCATTTC+AGG 0.181073 7.2:+3771542 None:intergenic
ATCCAATAAGAATAATTTAT+TGG 0.200077 7.2:+3765268 None:intergenic
TGCACTCTAACAGGCTTATT+TGG 0.207462 7.2:+3767644 None:intergenic
CATTTGCACGATCCTTTCTT+TGG 0.216716 7.2:-3764886 MS.gene29338:CDS
CTTGTCTTGTGAGAGAATTT+TGG 0.234265 7.2:+3774272 None:intergenic
CTCAAAACAAGCTGGTTTCT+TGG 0.256747 7.2:-3765782 MS.gene29338:CDS
CGACGGAGGGCGGTGAGTTT+GGG 0.259327 7.2:+3768714 None:intergenic
CTTTGCATTCTCTATGCGTT+TGG 0.270372 7.2:+3773004 None:intergenic
ATTACACGGACAGTTCATTT+TGG 0.274255 7.2:-3765212 MS.gene29338:CDS
TGCTGCCCTTGCTCAGTTCT+GGG 0.276895 7.2:-3765881 MS.gene29338:CDS
ACGACGGAGGGCGGTGAGTT+TGG 0.277564 7.2:+3768713 None:intergenic
TTTATTCTTGACAAGAAAAT+TGG 0.289639 7.2:-3773038 MS.gene29338:CDS
CAAATCTTGTGGATGAAATA+TGG 0.290355 7.2:-3767688 MS.gene29338:CDS
ACAACTACCACTCAGTAGTA+TGG 0.292302 7.2:-3763145 MS.gene29338:CDS
CAGCACGAGGTGCCGCCCTT+TGG 0.301925 7.2:-3766892 MS.gene29338:CDS
CACTCTTTCTCTCTAGTTGT+TGG 0.302750 7.2:+3765185 None:intergenic
GAGCGTTTGGCTCTGGTAAC+TGG 0.312271 7.2:-3772729 MS.gene29338:CDS
ATGGCCTTTGCTAGAGAAAC+AGG 0.313957 7.2:+3766710 None:intergenic
GTGCATGACCTAAAGTATTC+TGG 0.318859 7.2:-3767626 MS.gene29338:CDS
CTCCAGGCTTCTTTATAATC+TGG 0.321069 7.2:+3773328 None:intergenic
CGATCCTTTCTTTGGAAAGT+TGG 0.321545 7.2:-3764878 MS.gene29338:CDS
TCTGTCGCATGCAGCTTTAT+AGG 0.322788 7.2:+3766832 None:intergenic
TCGTGTTCGTGTTGACTCTA+TGG 0.326461 7.2:-3772928 MS.gene29338:CDS
GTTGAGACACCAAATCGTTT+TGG 0.335447 7.2:-3763832 MS.gene29338:CDS
TCCACAGGTTTCACCATTGC+TGG 0.345962 7.2:-3762333 MS.gene29338:intron
CATCTAAACCAGAATACTTT+AGG 0.348338 7.2:+3767618 None:intergenic
TTTAGGTCATGCACTCTAAC+AGG 0.349127 7.2:+3767635 None:intergenic
GCTCTGCTCGCCAATGGCTT+TGG 0.349972 7.2:-3762307 MS.gene29338:CDS
TTTGCATTCTCTATGCGTTT+GGG 0.352812 7.2:+3773005 None:intergenic
GTACTACAACTCTCTGGTTC+TGG 0.354412 7.2:+3765299 None:intergenic
CAGCAGTACATCCCTCATTC+TGG 0.365145 7.2:+3771372 None:intergenic
TCTGAGGTCTGAACTTGTTC+AGG 0.366333 7.2:-3767576 MS.gene29338:CDS
GGTAGAAGACAATACATATC+TGG 0.367129 7.2:-3768603 MS.gene29338:CDS
TAAACTGTTTCACTGATGAT+AGG 0.369163 7.2:+3762272 None:intergenic
TGACTTCCTCCAAAACGATT+TGG 0.369310 7.2:+3763823 None:intergenic
GCATAACTTGCAGATAAAAT+TGG 0.370195 7.2:-3763210 MS.gene29338:intron
TGAGATTGAGATTGAGATTG+AGG 0.373122 7.2:+3768871 None:intergenic
AGATGCTGTAATGAGATTAA+AGG 0.378997 7.2:-3774226 MS.gene29338:intron
CATCCCATGACTATAATTGC+AGG 0.379746 7.2:-3774581 MS.gene29338:CDS
GAGGATTTCTGGACGGCAAT+GGG 0.380484 7.2:+3766734 None:intergenic
CCCTTGCTCAGTTCTGGGAT+TGG 0.382341 7.2:-3765876 MS.gene29338:CDS
AAATTATTCTTATTGGATAG+TGG 0.384241 7.2:-3765263 MS.gene29338:CDS
TCTTGATCAGGCAGTCTTCC+CGG 0.384970 7.2:-3764936 MS.gene29338:CDS
GGCCATGGCTATTGCTGACT+TGG 0.384996 7.2:-3774852 MS.gene29338:CDS
AAGACCATGCTTTCGGCATT+CGG 0.388615 7.2:-3764611 MS.gene29338:CDS
GGTTGGAGACATGGTTGAAC+GGG 0.390613 7.2:-3770764 MS.gene29338:CDS
ATTCTGTCTTCTCTCCTCCT+TGG 0.391078 7.2:+3770643 None:intergenic
ATCCATTCCCTTTGGGCCTA+AGG 0.391153 7.2:+3774820 None:intergenic
CAAAACCAGGGGTATCTTCC+GGG 0.391835 7.2:+3764918 None:intergenic
GCTTACATACGTGCCCATTC+AGG 0.392351 7.2:-3763782 MS.gene29338:intron
TTATGATATCATCAACTCTA+AGG 0.402837 7.2:+3770674 None:intergenic
CAAGGTATCAGTTACCGTTA+TGG 0.404564 7.2:-3764690 MS.gene29338:CDS
TGAGTGGCTCAATGAGGTTT+TGG 0.404752 7.2:-3768331 MS.gene29338:CDS
TCTCTCTCCTTTCTCTTCGC+TGG 0.406197 7.2:+3774898 None:intergenic
AGCAGGGTGTTGCTTGGAGG+CGG 0.406361 7.2:-3771569 MS.gene29338:CDS
GCATTATCAGCAATGGTTGT+TGG 0.407647 7.2:+3771440 None:intergenic
GATCCTTTCTTTGGAAAGTT+GGG 0.415093 7.2:-3764877 MS.gene29338:CDS
CATTGCTGATAATGCTGGTT+TGG 0.419056 7.2:-3771432 MS.gene29338:CDS
AACTACCTCTGTTGTTGTAT+TGG 0.419643 7.2:-3774651 MS.gene29338:CDS
CATAGAGAATGCAAAGATAC+TGG 0.422234 7.2:-3772997 MS.gene29338:CDS
CTTATTGAAGAGATTATGAT+TGG 0.428527 7.2:-3772648 MS.gene29338:CDS
GAGATTGAGGAAGGAGGAGG+AGG 0.429171 7.2:+3768884 None:intergenic
TATTATGAAGACCATGCTTT+CGG 0.430181 7.2:-3764618 MS.gene29338:CDS
ATCAAATATGCATACACAAC+AGG 0.436777 7.2:+3767257 None:intergenic
TGCTTTCGGCATTCGGATTG+AGG 0.439904 7.2:-3764604 MS.gene29338:intron
TTCTGGTGTTGCAATGGGGC+AGG 0.444806 7.2:-3772604 MS.gene29338:CDS
CTATGTTTGCTTTCTTCAAG+TGG 0.444865 7.2:+3767171 None:intergenic
CTTCACCTTGTCTGTGTCCA+TGG 0.445280 7.2:+3772962 None:intergenic
ACAGACAAGGTGAAGATATA+CGG 0.446868 7.2:-3772954 MS.gene29338:CDS
CTCATGCGTGCTGGAAATCC+AGG 0.447160 7.2:-3768369 MS.gene29338:CDS
TATTTGATTGTGGAGATTGA+TGG 0.448485 7.2:-3767242 MS.gene29338:CDS
AGAAGCAACTGAACTCCAAT+TGG 0.450371 7.2:-3768395 MS.gene29338:CDS
TGGAGGCGGGTGGCCTGAAA+TGG 0.452003 7.2:-3771555 MS.gene29338:CDS
AGGGATAATGTAAGCGTCAA+TGG 0.452562 7.2:+3768668 None:intergenic
TGAGGAAGGAGGAGGAGGAG+TGG 0.455539 7.2:+3768889 None:intergenic
GAATGCAAGATTGTCATCTA+AGG 0.456689 7.2:-3766664 MS.gene29338:intron
CTCTGGTGAGCGTCTTGAGA+AGG 0.456914 7.2:+3768648 None:intergenic
GAGGAGCTCTTTGCTGATGC+GGG 0.457731 7.2:-3772789 MS.gene29338:CDS
GCATCAGCAAAGAGCTCCTC+TGG 0.457957 7.2:+3772792 None:intergenic
TAGTCCTTGCAATGTTCATC+AGG 0.458776 7.2:+3774304 None:intergenic
TAGTGTATGATAGCACCATT+TGG 0.458901 7.2:+3765326 None:intergenic
ACAGTGCTGAGTTGATTTCT+CGG 0.458993 7.2:-3771409 MS.gene29338:CDS
ATTGAGATTGAGATTGAGGA+AGG 0.459521 7.2:+3768875 None:intergenic
GCTGGAATTGATGTCATCTC+TGG 0.462467 7.2:-3771353 MS.gene29338:CDS
TGCGGAAATGGAACTGGAAG+AGG 0.463316 7.2:+3768788 None:intergenic
CAGCCATTGGCATACCTGAA+TGG 0.464361 7.2:+3763768 None:intergenic
GTCAATGGAGACATCTGGTT+TGG 0.465101 7.2:+3768683 None:intergenic
GGAAAGTTGGGCTTGACTAC+AGG 0.465682 7.2:-3764865 MS.gene29338:CDS
GGTGAGTTTGGGGTCGGAGT+CGG 0.466526 7.2:+3768725 None:intergenic
GCAGGGTGTTGCTTGGAGGC+GGG 0.468045 7.2:-3771568 MS.gene29338:CDS
AGGAGGAGGAGTGGATTGAG+AGG 0.470274 7.2:+3768898 None:intergenic
ACCTCTGTTGTTGTATTGGC+TGG 0.470611 7.2:-3774647 MS.gene29338:CDS
AGCACGCATGAGAATCCAAT+TGG 0.472766 7.2:+3768380 None:intergenic
AACCCTGAGTCTGTTAAGCT+TGG 0.475389 7.2:-3772681 MS.gene29338:CDS
CTCAGACTGTCAATGACAGC+AGG 0.476182 7.2:-3771586 MS.gene29338:CDS
AGGTCTGAACTTGTTCAGGC+TGG 0.477425 7.2:-3767572 MS.gene29338:CDS
GCTAAAGTTGCTGAGATTGA+AGG 0.478957 7.2:-3772906 MS.gene29338:CDS
TCACTAGTAGTAGGTACTCC+TGG 0.480886 7.2:+3768351 None:intergenic
TGCCCAAGCTTAACAGACTC+AGG 0.481251 7.2:+3772678 None:intergenic
GAGTTCATCGCTGAATGTTA+CGG 0.481317 7.2:-3768624 MS.gene29338:CDS
GGCAAAGGAAATTGATGCAT+TGG 0.483080 7.2:-3771528 MS.gene29338:CDS
CAGAATGAGGGATGTACTGC+TGG 0.484170 7.2:-3771371 MS.gene29338:CDS
GAAGGAGAAAATGAAAGAAA+AGG 0.485024 7.2:-3772877 MS.gene29338:CDS
AAAGTTCAAGATGATGAAGT+TGG 0.486158 7.2:-3774680 MS.gene29338:CDS
ACAGGCTTATTTGGAGGCTC+CGG 0.487763 7.2:+3767653 None:intergenic
AGCCATTGGCATACCTGAAT+GGG 0.488613 7.2:+3763769 None:intergenic
CCGCGCTGAGCACCAGAATG+AGG 0.489347 7.2:-3771384 MS.gene29338:CDS
GGAGGATTTCTGGACGGCAA+TGG 0.491023 7.2:+3766733 None:intergenic
AAGCCCAACTTTCCAAAGAA+AGG 0.493763 7.2:+3764874 None:intergenic
AATTGGATTCTCATGCGTGC+TGG 0.493816 7.2:-3768378 MS.gene29338:CDS
GAAAAGGTGAACAAGATCAT+AGG 0.494619 7.2:-3772861 MS.gene29338:CDS
TGGATGGCTCTGCTCGCCAA+TGG 0.496777 7.2:-3762313 MS.gene29338:CDS
GGGTCATATAGCTCTTGATC+AGG 0.501429 7.2:-3764948 MS.gene29338:CDS
TACCTTAGGCCCAAAGGGAA+TGG 0.504259 7.2:-3774822 MS.gene29338:CDS
TCGGATACAATCGAATTGTA+TGG 0.504696 7.2:+3767140 None:intergenic
ACCCTGAGTCTGTTAAGCTT+GGG 0.506927 7.2:-3772680 MS.gene29338:CDS
TGGTATTGAGCGTTTGGCTC+TGG 0.508693 7.2:-3772736 MS.gene29338:CDS
CTTGACAAGAAAATTGGTCT+CGG 0.509152 7.2:-3773032 MS.gene29338:CDS
GAAACCTGCAATTATAGTCA+TGG 0.510564 7.2:+3774577 None:intergenic
TAAGCGTCAATGGAGACATC+TGG 0.510688 7.2:+3768678 None:intergenic
GGCATCATGCAATGACCTCT+CGG 0.511037 7.2:+3771622 None:intergenic
GTCCAGATTATAAAGAAGCC+TGG 0.511659 7.2:-3773330 MS.gene29338:CDS
ACAAAACCAGGGGTATCTTC+CGG 0.511682 7.2:+3764917 None:intergenic
CATTAGTGACAGTAACTTCA+CGG 0.513830 7.2:+3774771 None:intergenic
TGAGTGTGCTCGTAGTGCTT+TGG 0.514026 7.2:-3774543 MS.gene29338:CDS
TCGACGAGGACTTTAGCAGC+TGG 0.514395 7.2:+3774710 None:intergenic
AATTGCGTGGTTGTTGAACT+TGG 0.515023 7.2:-3767516 MS.gene29338:intron
ATTCAGCGATGAACTCGCTC+TGG 0.515881 7.2:+3768631 None:intergenic
TTCTGTTGATATCCTATCGT+TGG 0.516333 7.2:+3765837 None:intergenic
TTGAGCCACTCACTAGTAGT+AGG 0.517366 7.2:+3768342 None:intergenic
ACAACCATTGCTGATAATGC+TGG 0.517593 7.2:-3771437 MS.gene29338:CDS
AACGGTAACTGATACCTTGA+GGG 0.519014 7.2:+3764694 None:intergenic
AGGAAATTGATGCATTGGCC+AGG 0.519392 7.2:-3771523 MS.gene29338:CDS
GGTTCAGGTTCCGGTCCAAA+TGG 0.521296 7.2:-3765341 MS.gene29338:intron
AGTATGATACCTGCAAAACT+CGG 0.521542 7.2:+3765156 None:intergenic
ATTGAGATTGAGGAAGGAGG+AGG 0.522372 7.2:+3768881 None:intergenic
CAACTACCACTCAGTAGTAT+GGG 0.524098 7.2:-3763144 MS.gene29338:CDS
GACAGCAGGGTGTTGCTTGG+AGG 0.524224 7.2:-3771572 MS.gene29338:CDS
GATGAAGCCAGCGAAGAGAA+AGG 0.524809 7.2:-3774905 MS.gene29338:CDS
CCACTCAGTAGTATGGGAAA+AGG 0.525510 7.2:-3763138 MS.gene29338:intron
CAGGTTTCACCATTGCTGGA+TGG 0.525995 7.2:-3762329 MS.gene29338:CDS
TTTGTACAATTCAAATCTTG+TGG 0.526383 7.2:-3767699 MS.gene29338:CDS
GAGTTTCGCTCAAAACAAGC+TGG 0.527663 7.2:-3765790 MS.gene29338:CDS
ACGAGGTGCCGCCCTTTGGT+TGG 0.529461 7.2:-3766888 MS.gene29338:CDS
CGCGCTGAGCACCAGAATGA+GGG 0.529599 7.2:-3771383 MS.gene29338:CDS
AATGCATCCAGCACAAAACC+AGG 0.530179 7.2:+3764905 None:intergenic
ACTCTAACAGGCTTATTTGG+AGG 0.530606 7.2:+3767647 None:intergenic
AGAAAGCAAACATAGAGATC+AGG 0.530867 7.2:-3767163 MS.gene29338:CDS
GAGCACACTCAGCCGCCATT+CGG 0.530966 7.2:+3774555 None:intergenic
TTGGCGCCAGGTGCTAGAGT+TGG 0.531454 7.2:-3768312 MS.gene29338:CDS
CTTCTGGTAGGTTGGAGACA+TGG 0.533014 7.2:-3770773 MS.gene29338:intron
GACTTGGTTAAGACTACCTT+AGG 0.535018 7.2:-3774836 MS.gene29338:CDS
GTCTTCCCGGAAGATACCCC+TGG 0.535450 7.2:-3764923 MS.gene29338:CDS
GAGATTGAGATTGAGGAAGG+AGG 0.538408 7.2:+3768878 None:intergenic
CGGGTGGCCTGAAATGGTAA+TGG 0.539649 7.2:-3771549 MS.gene29338:CDS
ATAGGAACTGGGCATGGTGT+AGG 0.540303 7.2:-3764741 MS.gene29338:intron
AGTGGTGCTCAATATGTTGA+TGG 0.542016 7.2:-3765245 MS.gene29338:CDS
AATTTGACCCCTCTAGTGAA+TGG 0.542154 7.2:-3764666 MS.gene29338:CDS
GGGTGTTGCTTGGAGGCGGG+TGG 0.542712 7.2:-3771565 MS.gene29338:CDS
GCATACACAACAGGTGAATG+TGG 0.543084 7.2:+3767266 None:intergenic
TGTACAAATAAACGAGCTCA+TGG 0.543589 7.2:+3767714 None:intergenic
TGAAGCATTCAAAGTCAAGC+AGG 0.543590 7.2:-3770734 MS.gene29338:CDS
AGGATTTCTGGACGGCAATG+GGG 0.546192 7.2:+3766735 None:intergenic
AGAGGAAGTATCCAACCAAA+GGG 0.548045 7.2:+3766877 None:intergenic
TCCACAGTACTACAACTCTC+TGG 0.548101 7.2:+3765293 None:intergenic
CGACGAGGACTTTAGCAGCT+GGG 0.549343 7.2:+3774711 None:intergenic
TGTATTGCTATCTGCAACAG+AGG 0.550363 7.2:-3770710 MS.gene29338:CDS
AAGACTACCTTAGGCCCAAA+GGG 0.550690 7.2:-3774827 MS.gene29338:CDS
GACGGAGGGCGGTGAGTTTG+GGG 0.551049 7.2:+3768715 None:intergenic
AATGACAGCAGGGTGTTGCT+TGG 0.551264 7.2:-3771575 MS.gene29338:CDS
AGAGGAGCTCTTTGCTGATG+CGG 0.551374 7.2:-3772790 MS.gene29338:CDS
ATGAAATATGGAAAGAAGCT+AGG 0.553831 7.2:-3767676 MS.gene29338:CDS
CAATCATGCCATTCACTAGA+GGG 0.554387 7.2:+3764658 None:intergenic
GCCAATCCCAGAACTGAGCA+AGG 0.554706 7.2:+3765875 None:intergenic
GATTGTTAAGAATGAATATG+AGG 0.555225 7.2:-3768962 MS.gene29338:intron
TGAGATTGAAGGAGCCGAGA+AGG 0.556086 7.2:-3772895 MS.gene29338:CDS
TGCTTTGGTAGAGAAGGTTG+TGG 0.556420 7.2:-3774528 MS.gene29338:CDS
GTGGACAACAAAGGAGATGC+TGG 0.557280 7.2:-3774509 MS.gene29338:intron
TCTGGTGAGCGTCTTGAGAA+GGG 0.558557 7.2:+3768649 None:intergenic
CGATTCAAATGTTACTGAAG+AGG 0.559280 7.2:-3767201 MS.gene29338:CDS
GAGTGTTGTTCCAAAGCCAT+TGG 0.559693 7.2:+3762297 None:intergenic
GGAGGAGGAGTGGATTGAGA+GGG 0.564135 7.2:+3768899 None:intergenic
GCATGGTCTTCATAATAGCC+AGG 0.566782 7.2:+3764624 None:intergenic
AGCTGGGTTATCAATGTGAA+GGG 0.569702 7.2:+3774727 None:intergenic
CAAGATGATGAAGTTGGCGA+TGG 0.570613 7.2:-3774674 MS.gene29338:CDS
TCGTAGTGCTTTGGTAGAGA+AGG 0.572237 7.2:-3774534 MS.gene29338:CDS
AAACCTGCAATTATAGTCAT+GGG 0.572960 7.2:+3774578 None:intergenic
AGAGCTCCTCTGGAAAATTG+TGG 0.573386 7.2:+3772802 None:intergenic
TATCGACAACAGAGATCGAT+TGG 0.575433 7.2:-3763172 MS.gene29338:CDS
GCCTGAAATGGTAATGGCAA+AGG 0.576296 7.2:-3771543 MS.gene29338:CDS
CAGCTGGGTTATCAATGTGA+AGG 0.577404 7.2:+3774726 None:intergenic
TGAAGAGATTATGATTGGTG+AGG 0.578048 7.2:-3772643 MS.gene29338:CDS
CTCCCCTGTTTCTCTAGCAA+AGG 0.578494 7.2:-3766714 MS.gene29338:CDS
AATATGGAAAGAAGCTAGGC+CGG 0.579709 7.2:-3767672 MS.gene29338:CDS
AACAGACTCAGGGTTGTCAA+AGG 0.580150 7.2:+3772689 None:intergenic
CGAGCAGAGCCATCCAGCAA+TGG 0.581491 7.2:+3762320 None:intergenic
GAGTCTATCAGTGATCCTCC+AGG 0.581503 7.2:+3773312 None:intergenic
GAGGGGTCAAATTTCCATAA+CGG 0.581522 7.2:+3764676 None:intergenic
TTCAAATGTTACTGAAGAGG+TGG 0.581975 7.2:-3767198 MS.gene29338:CDS
CAAAATTCTCTCACAAGACA+AGG 0.582057 7.2:-3774271 MS.gene29338:CDS
GTATGATACCTGCAAAACTC+GGG 0.582642 7.2:+3765157 None:intergenic
GGAAGAGGTGCAATTGCGGA+TGG 0.583401 7.2:+3768803 None:intergenic
GCATTGGCCAGGAAAACTCC+AGG 0.585369 7.2:-3771512 MS.gene29338:CDS
AATGTTCATGAAGGCCCTCA+AGG 0.587601 7.2:-3764708 MS.gene29338:CDS
TCCCACAAAGCAATGACCAT+TGG 0.589423 7.2:-3774941 None:intergenic
TCTTTCAGTTTGGCAGCACG+AGG 0.589915 7.2:-3766905 MS.gene29338:intron
AGGTTGGAGACATGGTTGAA+CGG 0.592539 7.2:-3770765 MS.gene29338:CDS
TTTGGAGGAAGTCAATACCT+AGG 0.593416 7.2:-3763814 MS.gene29338:CDS
CTGTCATCTATATAGGAACT+GGG 0.594643 7.2:-3764752 MS.gene29338:intron
GTGAACAAGATCATAGGTCA+TGG 0.596754 7.2:-3772855 MS.gene29338:CDS
TAAGACTACCTTAGGCCCAA+AGG 0.597137 7.2:-3774828 MS.gene29338:CDS
GGGGTCGGAGTCGGAATCTG+CGG 0.599428 7.2:+3768734 None:intergenic
TATGATAGCACCATTTGGAC+CGG 0.600597 7.2:+3765331 None:intergenic
GAAGTTACTGTCACTAATGA+CGG 0.601731 7.2:-3774767 MS.gene29338:CDS
ATATCATAACTTGTGCTCCA+AGG 0.603826 7.2:-3770660 MS.gene29338:CDS
ATCTATATAGGAACTGGGCA+TGG 0.605092 7.2:-3764747 MS.gene29338:intron
ATGGCACGACTGACATTACA+CGG 0.605881 7.2:-3765226 MS.gene29338:CDS
CAGAGGAAGTATCCAACCAA+AGG 0.606761 7.2:+3766876 None:intergenic
CAAACCAGCATTATCAGCAA+TGG 0.610258 7.2:+3771433 None:intergenic
CAATCCGAATGCCGAAAGCA+TGG 0.612301 7.2:+3764607 None:intergenic
ACAATCATGCCATTCACTAG+AGG 0.615289 7.2:+3764657 None:intergenic
GGAGAAGAGACGACGGAGGG+CGG 0.615870 7.2:+3768704 None:intergenic
CACTGCCATGGACACAGACA+AGG 0.617081 7.2:-3772967 MS.gene29338:CDS
ACTGGTTGCAAACACTGCCA+TGG 0.617479 7.2:-3772979 MS.gene29338:CDS
AATTGCAGGTTTCCGAATGG+CGG 0.618540 7.2:-3774567 MS.gene29338:CDS
AAACATAAAACTGAGAGCAA+AGG 0.618764 7.2:-3766788 MS.gene29338:CDS
AATGGCTTTGGAACAACACT+CGG 0.619733 7.2:-3762295 MS.gene29338:CDS
TGGCCTTTGCTAGAGAAACA+GGG 0.621317 7.2:+3766711 None:intergenic
GAGGGCGGTGAGTTTGGGGT+CGG 0.624003 7.2:+3768719 None:intergenic
TCAATGCCAACTCTAGCACC+TGG 0.624673 7.2:+3768306 None:intergenic
CGGAGTCGGAATCTGCGGAA+CGG 0.626583 7.2:+3768739 None:intergenic
GTTGGAGACATGGTTGAACG+GGG 0.628503 7.2:-3770763 MS.gene29338:CDS
CAATTGCGGATGGAGAAGAA+AGG 0.628660 7.2:+3768813 None:intergenic
TGTGTATGCATATTTGATTG+TGG 0.629245 7.2:-3767252 MS.gene29338:CDS
CAGACCTGATGAACATTGCA+AGG 0.630815 7.2:-3774308 MS.gene29338:CDS
ACCAGAGAGTTGTAGTACTG+TGG 0.631950 7.2:-3765294 MS.gene29338:CDS
AACCAAGTCAGCAATAGCCA+TGG 0.632695 7.2:+3774850 None:intergenic
GGCCTTTGCTAGAGAAACAG+GGG 0.632956 7.2:+3766712 None:intergenic
GAGAAGGTTGTGGACAACAA+AGG 0.635725 7.2:-3774518 MS.gene29338:CDS
GCCCAAGCTTAACAGACTCA+GGG 0.636349 7.2:+3772679 None:intergenic
CATACACAACAGGTGAATGT+GGG 0.637275 7.2:+3767267 None:intergenic
TAACGGTAACTGATACCTTG+AGG 0.638013 7.2:+3764693 None:intergenic
TATAATTGCAGGTTTCCGAA+TGG 0.638845 7.2:-3774570 MS.gene29338:CDS
TCAGACTGTCAATGACAGCA+GGG 0.640090 7.2:-3771585 MS.gene29338:CDS
TCTCGGCTTCATCAAGAACA+TGG 0.640574 7.2:+3771639 None:intergenic
AACTGGAAGAGGTGCAATTG+CGG 0.640869 7.2:+3768799 None:intergenic
TTGCGGATGGAGAAGAAAGG+AGG 0.641165 7.2:+3768816 None:intergenic
GTTGGGCTTGACTACAGGCA+TGG 0.641820 7.2:-3764860 MS.gene29338:intron
GCTGCATTGAATGTTCATGA+AGG 0.642355 7.2:-3764717 MS.gene29338:CDS
TTTGGAGAAGAGACGACGGA+GGG 0.643472 7.2:+3768701 None:intergenic
AACAGGGGAGGATTTCTGGA+CGG 0.648190 7.2:+3766727 None:intergenic
CGTCGAAATTGTCATCTCTG+AGG 0.649648 7.2:-3767592 MS.gene29338:CDS
CCGCGCTTGATGAAATTGCG+TGG 0.650905 7.2:-3767529 MS.gene29338:CDS
AGACAGAAATTACCAACGAT+AGG 0.652102 7.2:-3765849 MS.gene29338:CDS
CCTCATTCTGGTGCTCAGCG+CGG 0.652189 7.2:+3771384 None:intergenic
ATGCATCCAGCACAAAACCA+GGG 0.653908 7.2:+3764906 None:intergenic
ATGATTGTTAGCAATGAACC+TGG 0.657588 7.2:-3764642 MS.gene29338:CDS
TACTAGTGAGTGGCTCAATG+AGG 0.661559 7.2:-3768337 MS.gene29338:CDS
CGTTTGGCTCTGGTAACTGG+TGG 0.662358 7.2:-3772726 MS.gene29338:CDS
TGCATCCAGCACAAAACCAG+GGG 0.662714 7.2:+3764907 None:intergenic
TACAATAGCAGCATTAACAG+AGG 0.662984 7.2:+3766859 None:intergenic
ACTAGCTTTGACACGATAAG+CGG 0.665943 7.2:-3765757 MS.gene29338:intron
CCAATCCCAGAACTGAGCAA+GGG 0.665964 7.2:+3765876 None:intergenic
CGGCTTCATCAAGAACATGG+TGG 0.674569 7.2:+3771642 None:intergenic
TTGGAGACATGGTTGAACGG+GGG 0.675738 7.2:-3770762 MS.gene29338:CDS
GGAAGTATCCAACCAAAGGG+CGG 0.677651 7.2:+3766880 None:intergenic
GTTTGGAGAAGAGACGACGG+AGG 0.683087 7.2:+3768700 None:intergenic
TCATAACTTGTGCTCCAAGG+AGG 0.689519 7.2:-3770657 MS.gene29338:CDS
CTGGTTTGGAGAAGAGACGA+CGG 0.689719 7.2:+3768697 None:intergenic
GAGTACCTACTACTAGTGAG+TGG 0.690178 7.2:-3768347 MS.gene29338:CDS
AATCATGCCATTCACTAGAG+GGG 0.692594 7.2:+3764659 None:intergenic
CCACGCAATTTCATCAAGCG+CGG 0.696747 7.2:+3767529 None:intergenic
CTTTGCTAGAGAAACAGGGG+AGG 0.705484 7.2:+3766715 None:intergenic
AGTCTGAGATAGCACACACA+AGG 0.707210 7.2:+3771601 None:intergenic
GCCAGCCAATACAACAACAG+AGG 0.723732 7.2:+3774646 None:intergenic
ATGTTCTTGATGAAGCCGAG+AGG 0.725787 7.2:-3771637 MS.gene29338:CDS
CAGATTATAAAGAAGCCTGG+AGG 0.728244 7.2:-3773327 MS.gene29338:CDS
GAACTTTAGAAATGTCGACG+AGG 0.762938 7.2:+3774696 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.2 gene 3762271 3774951 3762271 ID=MS.gene29338
chr7.2 mRNA 3762271 3774951 3762271 ID=MS.gene29338.t1;Parent=MS.gene29338
chr7.2 exon 3774510 3774951 3774510 ID=MS.gene29338.t1.exon1;Parent=MS.gene29338.t1
chr7.2 CDS 3774510 3774951 3774510 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3774227 3774342 3774227 ID=MS.gene29338.t1.exon2;Parent=MS.gene29338.t1
chr7.2 CDS 3774227 3774342 3774227 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3773297 3773373 3773297 ID=MS.gene29338.t1.exon3;Parent=MS.gene29338.t1
chr7.2 CDS 3773297 3773373 3773297 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3772576 3773061 3772576 ID=MS.gene29338.t1.exon4;Parent=MS.gene29338.t1
chr7.2 CDS 3772576 3773061 3772576 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3771349 3771664 3771349 ID=MS.gene29338.t1.exon5;Parent=MS.gene29338.t1
chr7.2 CDS 3771349 3771664 3771349 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3770643 3770785 3770643 ID=MS.gene29338.t1.exon6;Parent=MS.gene29338.t1
chr7.2 CDS 3770643 3770785 3770643 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3768575 3768974 3768575 ID=MS.gene29338.t1.exon7;Parent=MS.gene29338.t1
chr7.2 CDS 3768575 3768974 3768575 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3768302 3768421 3768302 ID=MS.gene29338.t1.exon8;Parent=MS.gene29338.t1
chr7.2 CDS 3768302 3768421 3768302 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3767517 3767792 3767517 ID=MS.gene29338.t1.exon9;Parent=MS.gene29338.t1
chr7.2 CDS 3767517 3767792 3767517 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3767131 3767303 3767131 ID=MS.gene29338.t1.exon10;Parent=MS.gene29338.t1
chr7.2 CDS 3767131 3767303 3767131 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3766665 3766919 3766665 ID=MS.gene29338.t1.exon11;Parent=MS.gene29338.t1
chr7.2 CDS 3766665 3766919 3766665 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3765758 3765909 3765758 ID=MS.gene29338.t1.exon12;Parent=MS.gene29338.t1
chr7.2 CDS 3765758 3765909 3765758 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3765166 3765356 3765166 ID=MS.gene29338.t1.exon13;Parent=MS.gene29338.t1
chr7.2 CDS 3765166 3765356 3765166 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3764861 3764969 3764861 ID=MS.gene29338.t1.exon14;Parent=MS.gene29338.t1
chr7.2 CDS 3764861 3764969 3764861 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3764605 3764759 3764605 ID=MS.gene29338.t1.exon15;Parent=MS.gene29338.t1
chr7.2 CDS 3764605 3764759 3764605 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3763783 3763875 3763783 ID=MS.gene29338.t1.exon16;Parent=MS.gene29338.t1
chr7.2 CDS 3763783 3763875 3763783 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3763139 3763219 3763139 ID=MS.gene29338.t1.exon17;Parent=MS.gene29338.t1
chr7.2 CDS 3763139 3763219 3763139 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
chr7.2 exon 3762271 3762348 3762271 ID=MS.gene29338.t1.exon18;Parent=MS.gene29338.t1
chr7.2 CDS 3762271 3762348 3762271 ID=cds.MS.gene29338.t1;Parent=MS.gene29338.t1
Gene Sequence

>MS.gene29338

ATGACCATTGGTAATATTTTTAAAGATGAAGCCAGCGAAGAGAAAGGAGAGAGAGCAAGAATGTCATCTTTTGTTGGGGCCATGGCTATTGCTGACTTGGTTAAGACTACCTTAGGCCCAAAGGGAATGGATAAAATTTTGCAGTCAACAGGTAGAGGCCGTGAAGTTACTGTCACTAATGACGGTGCTACAATCTTGAAGTCCCTTCACATTGATAACCCAGCTGCTAAAGTCCTCGTCGACATTTCTAAAGTTCAAGATGATGAAGTTGGCGATGGAACTACCTCTGTTGTTGTATTGGCTGGCGAACTTTTAAGGGAAGCAGAAAAGCTCGTTGCAGCTAAAATTCATCCCATGACTATAATTGCAGGTTTCCGAATGGCGGCTGAGTGTGCTCGTAGTGCTTTGGTAGAGAAGGTTGTGGACAACAAAGGAGATGCTGGTATGCTTACTTTCCCTTTTGCATGTTTCCTTTTGGATTAGGTTTTACCATTGGCTCTGAATACTTTGTTATCATTAGAATTGTTATTATCATTTTGTTTACAGCATGGTTAGATATTAAAGCATTCTTTTGTCGTATCTTATGCATGAACTTACTTGGTTTTGCAGAGAAATTCAGGTCAGACCTGATGAACATTGCAAGGACTACTTTGAGCTCCAAAATTCTCTCACAAGACAAGGAGCATTTTGCTAAATTAGCTGTAGATGCTGTAATGAGATTAAAGGTGAACAGTCACTACCCTACTAATACAGAGTTCCATTTTTGGGGATTTAGCTAATAGTGCATGCATTGTCGCCATGATTTCTCCATAGTGTATGCATTGTTGCCATGTTTTCTCCATTGGTCCAACTGTGGAAAAACTATTGGCTTATTTTTGAGCTTATGCAAATAAATAAGATCTTATGTATTATTTATCCATAAGCTTGTCGAGGTAGTTTATGAAAAAACAGCACATGAAGATACAGTTTTTCGTTAGTGAGAACTTATGAATTAACATAAAAGCTTATTTATTTTCATAAGATATTCTTCATAAGCTATAAAATAAGTCGATCCAAACAGGCCCAAAAATTAGTTACAAATTTGATCTATATACTTTTCTGCATGCTTTGGCTAGTAAATACTTTAAATTTTATTTTATTTAGAAGTTTGGTTACAATGTTTTATATGATCCTGTAGTTTATAATCCATTCTTATGATGTGAGTATAACCTTTCAATTTCTTTCCAATCCTTAAAAAACAGTTTTTTGAGTTTTCTAATATAATTTCATGATAGCTTGTTCGAGCCTTGAATGCTCCATAAAAAATATTCACTGAAATAACGGGTTCAACTAGGTTATATTTTTGGCAGGTTATAGCAGTATTTCATTTGTGGGGATGGTTTTTCCTTTTCTCCCTAATGGTTTAAAAGTACACAATGTTCTGGTTTTCATTCTATACAGTTTATTCATTTTTTTGTACTTCTGTGCTAGCGGCCTAGCCATGCATCAGGATTTTTTTTTCTTTCCCATAGTGATCTCTATTATTATGAAATTAACTATATGCATTTTCACATTTTAATTTCCTTTTTTAAATTACAGGGAAGCACAAATTTAGAATCTGTCCAGATTATAAAGAAGCCTGGAGGATCACTGATAGACTCATTTTTAGATGAAGGGTAATATCGCTGAGTAGTTCCACATTTTTTAGTTTGAGTATCAAATGATTCTATTCTATCTTTTTTTAAATCCTGGGGTTTTTCTTTTGTATTGAGTTGCATAGGTAGCCTTCAAGTAACTTGAATAAACTCAAATGATCTCCAACTTCACCACTACCTGTATAATGAACTATTTACATTAGTCTTGGTAAAAAATAATATCTCTGTTTCTAAATTGGATTATACTTTGGTTTAGATTTATTCTTGACAAGAAAATTGGTCTCGGACAACCCAAACGCATAGAGAATGCAAAGATACTGGTTGCAAACACTGCCATGGACACAGACAAGGTGAAGATATACGGAGCTCGTGTTCGTGTTGACTCTATGGCTAAAGTTGCTGAGATTGAAGGAGCCGAGAAGGAGAAAATGAAAGAAAAGGTGAACAAGATCATAGGTCATGGCATCAACTGTTTTGTTAACAGACAATTGATCCACAATTTTCCAGAGGAGCTCTTTGCTGATGCGGGAATACTTGCTATTGAACATGCTGATTTTGATGGTATTGAGCGTTTGGCTCTGGTAACTGGTGGTGAAATCGCGTCAACCTTTGACAACCCTGAGTCTGTTAAGCTTGGGCAGTGTGAACTTATTGAAGAGATTATGATTGGTGAGGATAAATTGATTAAGTTTTCTGGTGTTGCAATGGGGCAGGCATGTACAATAGTTTTGAGAGGTGCTAGGTACTTTTTCTTCTTTTGTTATTTTAAATTCCTTTCTGACGTTCTTTTACATATTCAGGGATTATAATCTTGATACCATATAACTTCAGATCATTTTTCTTTTAGGCTTTGTTTGGAAGGGAGGGCAAGCGAGGTTTTTTTTTTTTTTTTTTTGGGGGGCGGGGTGAGAAATATAAAGTGGATAAATCTTTCACAATTTTTTGAAAGAGCAATTTTTAGATTGAATTTAAAAAATCCAACACACAGGAAAAAAAAAAAAATCCTCCAATACAATTTTTGGGTTCCCCCTAATGAGAGGGATTTTGTATTATGAATTAAAATTAACCCCCAAAGTCCTCTCCTCCGGTCCTCCCAATGTCTTCTATTTTTTCCACTTGCTCCTTCCTATTTTCCTAAACCCTCCTCTCCCCTCCAAACTCCCAAACAAAGCCTAAGGTTTTCTTATTCTAGCAGTATTTGTTTGTAATATTTCACTATTTATTCATGATATTAGTATTTCATAGGAATTGCTTAATACAAATGACCCTTTTATTCAGTTTCAGTTCTGGTTTATTAAAGGTTAATGTATAGGATTCTAATTTTTATTTGTTTGTTTAAAATATTTTATATTTAATAAATTGCAGCTAATAATTATTAAGTCCAATGATTTAACTGGACTGCTGAAATGTTGGATTTTTTTTTTTTTTGACAAATGCTGGAATGTTGGACATTAATTGCTTTCATGCAAACTTAGTTTATGCCCTTATATTTATGTTGCCCCGCTCCTTACCATTTATTATGCTTCAGTCAGTGCCTTTGAGTGGTACATGTATGGACTTCCTTGTATGTATCAGTAGACAGCTGTTTTTTAACAAATTTGATGGGCAGTTTTTTAGTTGCACTTTCAGCCTTGACGTCTGTTTTTGTGGCAGCCACCATGTTCTTGATGAAGCCGAGAGGTCATTGCATGATGCCTTGTGTGTGCTATCTCAGACTGTCAATGACAGCAGGGTGTTGCTTGGAGGCGGGTGGCCTGAAATGGTAATGGCAAAGGAAATTGATGCATTGGCCAGGAAAACTCCAGGAAAAAAGTCTCTTGCAATGGAGGCATTTTCTCGGGCTCTCTTGGCTATACCAACAACCATTGCTGATAATGCTGGTTTGGACAGTGCTGAGTTGATTTCTCGGCTCCGCGCTGAGCACCAGAATGAGGGATGTACTGCTGGAATTGATGTCATCTCTGGTTCTGTAAGTATAAAACAGATAATTGCGTGGATTTATTTGAGTGTGCATAATTTTGAAACGCTGCATCTTAATATATCATTCCATAATCTTTTTCTTGGTAGAAGTTCTGTTTCTGATCACTGCATTCACTCTGGTCATATCTTAGTAACTTCAGCATATAACATGAAATGTTTAATTAAAATTTGCAACATAAGTTTGTATTTTGTTTCATGGTGTCATTTCTAAATTAGATTGACTCCCTAGTGAACATGGTGGAGTTAGGATGTGTATGATAGGGACTTTGGTATCATGCGGAGCCTAAGTCCCGCATTGAATAATATGAGATGCTTGATGGAGTACCCAAGTGACTTGGTTCTTCGTCTTCTCTCATGACAACCAGATTTTAAGGAGTGCTTGAGTGTGTATCAGTGTGCAATTTATTAACTGAGTAATGAGTACATGTAACAGTGATTTTATTAAGTTCATGTTGTATTTTAAAAACGTATCCTGTAGGCTGCTAGCTCAACTTGGTTCCATTACATTTTCTGTTTGTCTTATATACTTCGACCGGTGTGTACTTCTGGTAGGTTGGAGACATGGTTGAACGGGGGATTTGTGAAGCATTCAAAGTCAAGCAGGCTGTATTGCTATCTGCAACAGAGGCAGCTGAGATGATCCTTAGAGTTGATGATATCATAACTTGTGCTCCAAGGAGGAGAGAAGACAGAATGTAAAATCTAGTGATCATCGAACTTCAGATGGGGAATTCCCGACTTATTCCAAAAATTTGCAATGTGGGTCAGCAACCAAAAGAATCATCATAGAATTGGTGCTCTTAACAGTTTAAATCAAGTGGTCACAATTGAACTTTTTATGTGCTTGTTTAAATTTTGATTATTGTTATGTGCATTTCCAGTTTCACCAAAAATTGGAATTTTGATCATGTCTTTAATGTGTGTATTAGTCTAGCTGCGAATTGGAATCTTACTATCTGAATCCTCAACGGTTGTACTAGGTGTTTAGTTTTGATATATTGTTTGAATGTTAGTGTAAGCTTTTTAAAATATCATATGATGTGCTGTCAAGGATTTAATTTGTTTACGGGGTAAAACTTTTTTATACAGACATTCACTTAAACAGCTAGATTTTTTTTAGAAAAAATCAGCTGGTGTTCCTTATAATAAAAAGGTTTCTTCTAGATAGTTTTTCAGTCCTCACAAGTTTATGTATCTGGAGTTCCTTATATGCTCAAGTCAATTGTCAAACAACTTCTGTCCTGCCATTGAATAACCAATCAGGTTTTACGTCCGAATATCATGACGCATTTGAAATTTATATATATATATATATATATTAGAAAGCCATAGATCGAGCCTTGTTTCAGTCACACATTAATTTCACCTTGTTATATATACTTAAACAGCATTTACAAATGCATAAATATGCTTATCGGAAAAAAAATGCGTAAATAGATTAACATAGGCCTTAAAAAAAATACTTCCTCCGGTCACTATTATAAGCAAAATTTCACTTTTTAAATACATTGAATAATTTTAATGTATCTAGGGAGTAGAAAATACAATGACTTTAAAATTGAAGAATTAAAATCATAGATTTTTTTTTGGTAGTGCCTGGGGTTTGAATTACAGACTATATATTTTATGCATCGTCCCAACCAACTGAGTTAAGCTCACGGGGACTAAAATCATAGATTTAAAATAGGGTTCCATGGTTCAAAAATGTAAATAAGTTAAAATAGAAAGGAAATTTTTTTAAACCTAAAATATTATTTTAGAACAATAAAAGAAGAAAAAAAAAAAAAAAAGAACGCAGTTAAGATGAAATTACAGTTACACAAAACCAAATAAACACAAAAAAAAAAATAAAATAAAATAAAAACACTGAACAATACGAGTTAAGATTACCTTCGCTCTTATAACACAAAATTAAGTTTAATGTGGATGAACTGATAAGATTTATTTTTGTACTCGAATAAGATTGTCTTTGGCAATCCGCAAGTCCTAGCTCAACTGACAAAATGCAGAACAGAAATTGTTAGGTTGGATGCTATGACCGGGGTTCGAACCTGGTACCTCCACTTGCGTGTGTGAGTTTATAATGGTTTTGCTATTTCGTCTATCGCGTGTGTGAGTTTATAATGGTTTTGCCATTTCGTCTATCTACGGAAAAAAAAAGATTGTCTTTGGCAAACGACAAATTATGTCTAAGCTTAATATCCTTCAACAAAAAAAAAATCCTTCTTGGTTAACAAGAAGTTTATGTACGCAACACACTTGGATTAATCTCTGCGCAGACTATATCCAATTTAAAAGAAGGAAAAAAAAAAAGTATTTGTTGTATCTGTATTCATTGATTACCTTACCCATTGATTGTTAAGAATGAATATGAGGTCGCTGTCATCATCATCACCTGCAACTGTAACAAAACTCGCCCTCTCAATCCACTCCTCCTCCTCCTTCCTCAATCTCAATCTCAATCTCAATCCATTTTTCAAATCCAATAAACATAACAAACCTCCTTTCTTCTCCATCCGCAATTGCACCTCTTCCAGTTCCATTTCCGCAAAACCATCTTCTCAACTCCGTAAAAACCGTTCCGCAGATTCCGACTCCGACCCCAAACTCACCGCCCTCCGTCGTCTCTTCTCCAAACCAGATGTCTCCATTGACGCTTACATTATCCCTTCTCAAGACGCTCACCAGAGCGAGTTCATCGCTGAATGTTACGGTAGAAGACAATACATATCTGGTTTTACTGGCAGTGCTGGAACTGCTGTTGTTACCAACGATAAAGCCGCTCTTTGGACTGATGGTCGCTACTTTCTCCAGGTTCGTTTTTTTTTTTTTTTTTGAATAAAACACGGACACCTGACTCGACACTGCCACACAGAGTTGTTAATTCATTTCACATTATGATTTCATTCATTGCAGGCAGAGAAGCAACTGAACTCCAATTGGATTCTCATGCGTGCTGGAAATCCAGGAGTACCTACTACTAGTGAGTGGCTCAATGAGGTTTTGGCGCCAGGTGCTAGAGTTGGCATTGATCCTGTTAGTAATTACTAATCACCACGCAACTTAACTCTTATTTTCTACCTTCATTTTACCATTTAGCCTCTCTTTCCAATACTTTGAATTGACTTATTTGAGCTTATGGTAGTCATAATTGCTTACGACGTGTCCATATACACTGTTTTTCAGCTTATTTCCATAAGCTATTCAGGATAAAGTATATAAACAACTTACAGCTTATATACACACAATCTGACATTATTTTATCTTTTGTTATAGGAATAGATCACACACGAGCATTTATATGATAAGCGTTTGTGCTATAAGCGCTTAATTAAGCTGTTTATACAAGCAGGACCTAAGTAGATTATCTTTTCTAATTGGTAATATCAATCCTAAACATCCTGTTGAAGTGTTCTGTTTGTACTCCTAGTAACCTGAAATCCTAAACCAATTAAAACCATATTTTCTCCCTTTTCCTTGTGTTATTGCATTTTTTTTTTACAGTGCCTGACAGGGTGTTATGTTCTGTATTGTTAAGGAGGCAGTTTCTTTTTACTTCGGATGCTGCTGAAGAACTTAAACATGTTATCTCTAAGAAAAACCATGAGCTCGTTTATTTGTACAATTCAAATCTTGTGGATGAAATATGGAAAGAAGCTAGGCCGGAGCCTCCAAATAAGCCTGTTAGAGTGCATGACCTAAAGTATTCTGGTTTAGATGTTGCGTCGAAATTGTCATCTCTGAGGTCTGAACTTGTTCAGGCTGGTTCATCTGCAATTATTGTCTCCGCGCTTGATGAAATTGCGTGGTTGTTGAACTTGGTAATGCATCTCAACAAACAACACCTTCTTTTAACTTGTTGTACTGACAGATATTTGTATACAATCATATATCCTTGTAAACCATCATTCAGGATCTTATTCAAGTTGCTTGGGTCTAACATGAGTAGTTCATTGATTTCTTTTTCCCCCCCTCTGTTTTTCACTGTTGATGATTTAATCAGTGAGAGTAACTTTTCCCCTTTTTCTTTGAAGAGAGGCAGTGATATCCCACATTCACCTGTTGTGTATGCATATTTGATTGTGGAGATTGATGGAGCTAAGTTATTTATTGACGATTCAAATGTTACTGAAGAGGTGGATGACCACTTGAAGAAAGCAAACATAGAGATCAGGCCATACAATTCGATTGTATCCGAGATTGAAAAGTAATTATGGAAATCTTATTTATTTTTTTATTATTTCACGACCCTTCCATTTTTCATATTTTTTAGTGGAAATGTCCAAGAAGGGTACAGTAGATAGGCCAAAATGTTTTTATTTTTAAAAACAGTAGCTTTCGCTCTTTCGCTTTTTTATGCTTAATTATTTTGTTTGTAAAAGCAGCGCTGTTTGAAACTGAGCTTGATTTTCTTTCAGTTTGGCAGCACGAGGTGCCGCCCTTTGGTTGGATACTTCCTCTGTTAATGCTGCTATTGTAAATGCCTATAAAGCTGCATGCGACAGATGTTATCAGAACTATGAGAGTAAACATAAAACTGAGAGCAAAGGTTTTGACAGATCAATTGCGAACTCAGATGTCCCCATTGCCGTCCAGAAATCCTCCCCTGTTTCTCTAGCAAAGGCCATAAAAAATGAAACGGAGCTGAAAGGAATGCAAGATTGTCATCTAAGGTGACCATAACTTACCTTGACAAGGATTACTCACAATGTTTTTCCATGTTTTGATTTCTATATTTTGATGATCTCTTTTAAGTTGGAGTGATTGTAAATACAGAAACCACAGATTATATAGATGAGCTATGCATTAGACTCTCAGTTTCAGTTATTAAAAAATTGGTATCTGGTTTTGGAAAATTATGACAGAACATGTGGTCAACTAAGCTAACACTTACCTTTTATTTGTCAAAACATCATTTTTCCAGGGTAGGTGGGGGTTTGTTGTCTTCCTTTATTTTGCAAATGGTAGTTGGTTAATATTTGCTTTACCGTTTTAATGAAACACGTTTGTTACATTTAAAAGAGTTACTTAGGGTGTGTTTGGATGGAGGGTTTAGGAGGGGAAGAGAGGGGAGGGCTTACTTTTCTTTTTTAAATTATTGACATTATAAAATGATTTTTAGAAAATTGAATTAACAACATGATAAATGATCATATAATACTTCAAAAACACTTGATTTATTTTATAAAAACATTTTACATTGTTTGTAATTTAAAAAATAAAAGTGAGCCCTCCCCTCCCTCCCCCTCCTAAACCCTCAATCCAAACACACCCTTACTGTTTTGGCTGATAGCTGAATTTTTTCTTCTTTCCCCTGTTGACCATTCATAAACATTTGATAAGAGTGTTTAATCTATGTATAGAAGAGTCCACATTGAAACTTGCTTTTTGTAGTTTATATACAACTGTTTTATCTTATTGTTTGCAGGGATGCTGCTGCCCTTGCTCAGTTCTGGGATTGGCTAGAGACAGAAATTACCAACGATAGGATATCAACAGAAGTAGAAGTTTCAGACAAACTTCTCGAGTTTCGCTCAAAACAAGCTGGTTTCTTGGATACTAGCTTTGACACGATAAGCGGTACTGTAGTACATTGACAAAACTTTTCTATTTTTTCACTCAAAAATTGGCTGAAGAAACATAAAAAGATACAACTATGTCTTTTTTTCGAAAGACTGGCTTAACAGCCAATTATTCCAGGGAATATTACAAAAAAGCATCACATGCTAAAAATATGGACAGTGAATGAAAACAATTTAGTGATTCTGTGTAAAAAAGTTGTAAGAAGTCTATAAAAATATGCTACTGTTATTCCATTATTATGACACATGTTTACCCATAGTTCTGTTCTAGTGTTTTCAGTATCTTCTTACGCGCTTCTTTTATTGTAGCTAAACAGATAGATATTAGATCGACAGATATAACCTTTGGTCCAACTCATCTTCCCCTAGACCTATAATCTATTCATTTTATCGGTTCAGGTTCCGGTCCAAATGGTGCTATCATACACTACAAACCAGAACCAGAGAGTTGTAGTACTGTGGATGCCAATAAATTATTCTTATTGGATAGTGGTGCTCAATATGTTGATGGCACGACTGACATTACACGGACAGTTCATTTTGGCAAGCCAACAACTAGAGAGAAAGAGTGTTTCACCCGAGTTTTGCAGGTATCATACTTTTATAATTTTTCTTGAGTTTCTTGTACAATTTTTTCTGGAGTTGATTTCTTCATTTTGTTCATTAGTTTTCCTTACAAGTCAATCATGCAAATGTATACCTTTTTTTTTTCAATGTTAACACCTGAGTTCTAGCAATCTTACTTTCTTGAATAATTGTTTGTCTCAACACATATCTAATTGCCAGGGTCATATAGCTCTTGATCAGGCAGTCTTCCCGGAAGATACCCCTGGTTTTGTGCTGGATGCATTTGCACGATCCTTTCTTTGGAAAGTTGGGCTTGACTACAGGCATGGTATATTTTTGCTTCCAGTGGTGGGATGTTTTTCATTTACTTATAATCAAAATGAGTTTATTGGTTGACTGAGCATTTGTGCGTAACTGTCATCTATATAGGAACTGGGCATGGTGTAGGAGCTGCATTGAATGTTCATGAAGGCCCTCAAGGTATCAGTTACCGTTATGGAAATTTGACCCCTCTAGTGAATGGCATGATTGTTAGCAATGAACCTGGCTATTATGAAGACCATGCTTTCGGCATTCGGATTGAGGTAATATTCTCTTCAGCTATCTGACATGCTCTGAAATGTTAACTCTGGCTTCCAGTTTTGTTCAACTAGTTTTATTGTGTGTTATTATAGCCATATTTACTTTATCTCCTTCATAAAGCCAATCCTATACACCAATTATATGTGGGAAAAATTCAAGCTGAATTTCTGATTAAATACGAGGTTTTTGAGATCTGTTTAAATTTGATAACTATTTCTAGAGTTCCTCGCTGGTTAATATGCTCGGTTTCAACTTATATGCATGGTTTGAAAAACCTTCCACGAGTCATGAGTGTCTTAAGAGGCTTTCCATGAATTACTTGATTCAATATCTTCATATATTTCAACATTCTTAGTATCACTTATCTGTGAACAGAAGTGCCCAGATACCATCCTACTTGATCACCAAGTTTGTATACGTTGGAAATTCCGCCTTCAATGCGGCCCACAACTAGCTGCCTAATTGAATCATTTGGGTTGCCTTCATCGCAGCCTCCAACACGTTCCTTGTGTTGGGTGTGAAGGGGTAGGTTTAGTCCAACATTGCCTAGAGATATAGCACGTGTAGTGTTTATAAAGAGAGACACCCATCACCTTAAAAGCCGGTTTTGCCCAACCAAAAATTCTGAGAGTATATTACGTTGTTTTTCCTTCTTTTCTGCCAAACTGTGGGGATAATATTTGTCAGTCCTATTATGGATTGCATAATGATGTCAGTATTTTAACTTGCAGAATCTACTGTATGTGAAAAATGTTGAGACACCAAATCGTTTTGGAGGAAGTCAATACCTAGGATTTGAAAAGCTTACATACGTGCCCATTCAGGTATGCCAATGGCTGTCAATCACCCTGGTCCGATATATATTCTGTTAGTGTTTTTTTTCTTTTCTCTGTTTTTTTTTTTTTTTTTTTGCAAAATTAAACCCCTGTTCGTAGTTCAACATGAGGAATTGAGAATGTTTATTGGTTGCAAGTCCTTTTTCTTAAGTAGGGATCTGGGACTGACTTGGTCCAACAGAAGTTCTCTAGGCCCATTTAGAGTGTTTGAAAGAATTTATTTTCCTTATCTTATGACATAAACAATTGTTAGGTATTTGGAAGAGCCTATGAAAATAGCTCGTGATATTGTGTACTTAAGTTGTTTTCAACTTATTAGAACTAATCTATTTTCTGTCTCTACCTCTGAAAGTATTTGAAACTTTACCAATGAAAATTGGATGCTCATTCCATTTTAAAGCATGCTATATTTTAAATATATTTCCAAAGGATCTGATGTGTTACTTTCAGGTTTCATTCAGTCCCCTTAGTTTTTCCTGAAATTTCAGAATGATTTGTTTAAGCCATATATTCTTTCACACACTCATTTGTAACCTGGGCATAACTTGCAGATAAAATTGGTCGCTGTGTCTCTGCTATCGACAACAGAGATCGATTGGCTTAACAACTACCACTCAGTAGTATGGGAAAAGGTATTTTGCTCTGTTTGTTGCATTGCATGCCTTTTTTCTTTCTTTTGATTCTCTTTTTCCCTATCTTTTACACGTCTCCATGAAGTAATAGAAATTCATCTGGATGTGCTTTTGTAACCACCTCCTTATTCTTCCGTTTCTTTAAAATATAAAATTTGATCACACTCTTACTCGGCAATTTAAGATCATCAAAACATCATGTAGTATAATTGCTTTTATCTCCTCCGACCATCCTCTCTCTTTGGCATGTCCATGGAACCACCCTTTACCCCAAATGAACAACAAAAGGGCCCTGCATCGTGCAGTATGGCCATCCCCTGATACGAGATTGGGCTAAGTTCTTCAATTGGGCTCCATAATTCACGACCAAAATGGAGAAGAAGTTTCCTTTTTGGAGGACTGAATACAACCAAGAGTTTTCACCTCTTGCATATGCCAAATTTTAGGATTACTTTTCTATTAGACATTTCTATTTCATGCTAGATTTCCTTTTCTGTTGTTAAATCATTCTTCTCTTATATGCCATGTAACGGTCATAGGCTAGGTGGCACCATGGCAGTATATCCACCTGTGTAGCGGATTATCATGACTATAAACCTTTCGTAGGGCACATAAACTTTTTTCCCTTGTTTTCCCTGCTTCCTTAATTTTTCCCTTGCTCAAAAAGGATTCTTTCATTGCCTTACTCCGAGCTGCTGCTTTTCCTTTTAAAAATAGAAACTCACTAAAAATTTATAATTTGTAATCCTGTATGGTCGATTGTTTTATAACTACTTTGATGCATCCACAGGTTTCACCATTGCTGGATGGCTCTGCTCGCCAATGGCTTTGGAACAACACTCGGCCTATCATCAGTGAAACAGTTTAA
Protein sequence

>MS.gene29338.t1

MTIGNIFKDEASEEKGERARMSSFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIIAGFRMAAECARSALVEKVVDNKGDAEKFRSDLMNIARTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESVQIIKKPGGSLIDSFLDEGFILDKKIGLGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEGAEKEKMKEKVNKIIGHGINCFVNRQLIHNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGQCELIEEIMIGEDKLIKFSGVAMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLLGGGWPEMVMAKEIDALARKTPGKKSLAMEAFSRALLAIPTTIADNAGLDSAELISRLRAEHQNEGCTAGIDVISGSVGDMVERGICEAFKVKQAVLLSATEAAEMILRVDDIITCAPRRREDRIMNMRSLSSSSPATVTKLALSIHSSSSFLNLNLNLNPFFKSNKHNKPPFFSIRNCTSSSSISAKPSSQLRKNRSADSDSDPKLTALRRLFSKPDVSIDAYIIPSQDAHQSEFIAECYGRRQYISGFTGSAGTAVAEKQLNSNWILMRAGNPGVPTTSEWLNEVLAPGARVGIDPFLFTSDAAEELKHVISKKNHELVYLYNSNLVDEIWKEARPEPPNKPVRVHDLKYSGLDVASKLSSLRSELVQAGSSAIIVSALDEIAWLLNLRGSDIPHSPVVYAYLIVEIDGAKLFIDDSNVTEEVDDHLKKANIEIRPYNSIVSEIENLAARGAALWLDTSSVNAAIVNAYKAACDRCYQNYESKHKTESKGFDRSIANSDVPIAVQKSSPVSLAKAIKNETELKGMQDCHLRDAAALAQFWDWLETEITNDRISTEVEVSDKLLEFRSKQAGFLDTSFDTISGSGPNGAIIHYKPEPESCSTVDANKLFLLDSGAQYVDGTTDITRTVHFGKPTTREKECFTRVLQGHIALDQAVFPEDTPGFVLDAFARSFLWKVGLDYRHGTGHGVGAALNVHEGPQGISYRYGNLTPLVNGMIVSNEPGYYEDHAFGIRIENLLYVKNVETPNRFGGSQYLGFEKLTYVPIQIKLVAVSLLSTTEIDWLNNYHSVVWEKVSPLLDGSARQWLWNNTRPIISETV