Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90567.t1 | RHN73990.1 | 92.5 | 517 | 39 | 0 | 1 | 517 | 1 | 517 | 1.10E-291 | 1011.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90567.t1 | Q9LMA1 | 42.6 | 514 | 282 | 9 | 4 | 511 | 12 | 518 | 1.4e-114 | 414.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90567.t1 | A0A396J7C8 | 92.5 | 517 | 39 | 0 | 1 | 517 | 1 | 517 | 7.6e-292 | 1011.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050128 | MS.gene90567 | 0.853551 | 2.22E-61 | -1.69E-46 |
| MS.gene050581 | MS.gene90567 | 0.804403 | 2.20E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene90567 | 0.821832 | 3.27E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene90567 | 0.803413 | 3.53E-49 | -1.69E-46 |
| MS.gene05858 | MS.gene90567 | 0.82147 | 3.97E-53 | -1.69E-46 |
| MS.gene060005 | MS.gene90567 | 0.80583 | 1.10E-49 | -1.69E-46 |
| MS.gene060495 | MS.gene90567 | 0.809941 | 1.47E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90567.t1 | MTR_2g450310 | 92.276 | 479 | 37 | 0 | 1 | 479 | 1 | 479 | 0.0 | 905 |
| MS.gene90567.t1 | MTR_2g450510 | 78.077 | 520 | 109 | 2 | 1 | 517 | 1 | 518 | 0.0 | 842 |
| MS.gene90567.t1 | MTR_4g124800 | 41.365 | 498 | 267 | 11 | 27 | 511 | 36 | 521 | 2.13e-124 | 374 |
| MS.gene90567.t1 | MTR_2g044140 | 40.351 | 513 | 295 | 8 | 4 | 511 | 13 | 519 | 4.04e-124 | 373 |
| MS.gene90567.t1 | MTR_2g043850 | 41.131 | 513 | 291 | 8 | 4 | 511 | 13 | 519 | 1.89e-123 | 372 |
| MS.gene90567.t1 | MTR_2g020630 | 38.178 | 516 | 294 | 8 | 1 | 511 | 10 | 505 | 1.59e-122 | 369 |
| MS.gene90567.t1 | MTR_1308s0010 | 76.879 | 173 | 40 | 0 | 227 | 399 | 1 | 173 | 8.00e-91 | 275 |
| MS.gene90567.t1 | MTR_1088s0010 | 82.993 | 147 | 25 | 0 | 1 | 147 | 1 | 147 | 3.49e-87 | 265 |
| MS.gene90567.t1 | MTR_6g037690 | 48.408 | 157 | 66 | 2 | 369 | 511 | 157 | 312 | 4.30e-43 | 156 |
| MS.gene90567.t1 | MTR_1372s0010 | 82.278 | 79 | 14 | 0 | 147 | 225 | 1 | 79 | 3.26e-40 | 140 |
| MS.gene90567.t1 | MTR_1g069275 | 26.133 | 375 | 211 | 18 | 7 | 376 | 27 | 340 | 4.07e-17 | 84.0 |
| MS.gene90567.t1 | MTR_7g107710 | 25.587 | 383 | 207 | 19 | 2 | 374 | 3 | 317 | 1.11e-15 | 79.3 |
| MS.gene90567.t1 | MTR_8g037880 | 25.692 | 253 | 131 | 7 | 4 | 232 | 3 | 222 | 2.74e-15 | 78.6 |
| MS.gene90567.t1 | MTR_8g037910 | 25.692 | 253 | 130 | 7 | 4 | 232 | 3 | 221 | 5.60e-15 | 75.5 |
| MS.gene90567.t1 | MTR_8g037910 | 25.692 | 253 | 130 | 7 | 4 | 232 | 3 | 221 | 7.86e-15 | 77.0 |
| MS.gene90567.t1 | MTR_8g037910 | 25.692 | 253 | 130 | 7 | 4 | 232 | 3 | 221 | 8.01e-15 | 75.9 |
| MS.gene90567.t1 | MTR_4g051642 | 24.607 | 382 | 217 | 16 | 1 | 376 | 3 | 319 | 1.79e-14 | 75.9 |
| MS.gene90567.t1 | MTR_1g011630 | 26.455 | 378 | 203 | 18 | 7 | 376 | 18 | 328 | 4.44e-14 | 74.7 |
| MS.gene90567.t1 | MTR_7g099330 | 25.199 | 377 | 210 | 19 | 6 | 376 | 25 | 335 | 6.86e-14 | 73.9 |
| MS.gene90567.t1 | MTR_8g432640 | 25.849 | 383 | 205 | 18 | 2 | 374 | 3 | 316 | 2.94e-13 | 71.6 |
| MS.gene90567.t1 | MTR_3g109520 | 26.053 | 380 | 208 | 17 | 6 | 376 | 40 | 355 | 5.98e-13 | 71.2 |
| MS.gene90567.t1 | MTR_5g033260 | 24.611 | 386 | 206 | 16 | 2 | 374 | 3 | 316 | 1.47e-12 | 69.7 |
| MS.gene90567.t1 | MTR_1g008380 | 25.333 | 375 | 214 | 19 | 7 | 376 | 44 | 357 | 7.53e-12 | 67.8 |
| MS.gene90567.t1 | MTR_3g437580 | 27.165 | 254 | 132 | 11 | 3 | 229 | 11 | 238 | 8.36e-12 | 67.0 |
| MS.gene90567.t1 | MTR_3g437580 | 27.165 | 254 | 132 | 11 | 3 | 229 | 11 | 238 | 1.02e-11 | 67.4 |
| MS.gene90567.t1 | MTR_7g107690 | 26.724 | 232 | 133 | 10 | 1 | 228 | 1 | 199 | 6.98e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90567.t1 | AT1G19250 | 42.389 | 519 | 278 | 11 | 4 | 512 | 12 | 519 | 7.38e-137 | 406 |
| MS.gene90567.t1 | AT5G45180 | 38.431 | 497 | 249 | 13 | 4 | 492 | 12 | 459 | 1.54e-108 | 331 |
| MS.gene90567.t1 | AT4G28720 | 26.720 | 378 | 210 | 19 | 6 | 376 | 26 | 343 | 1.08e-16 | 82.8 |
| MS.gene90567.t1 | AT1G62560 | 26.772 | 254 | 127 | 9 | 3 | 229 | 11 | 232 | 3.60e-15 | 77.8 |
| MS.gene90567.t1 | AT1G62560 | 26.772 | 254 | 127 | 9 | 3 | 229 | 11 | 232 | 3.78e-15 | 78.2 |
| MS.gene90567.t1 | AT4G32540 | 26.190 | 378 | 206 | 19 | 7 | 376 | 23 | 335 | 1.09e-14 | 76.6 |
| MS.gene90567.t1 | AT1G48910 | 25.661 | 378 | 214 | 16 | 1 | 374 | 1 | 315 | 1.29e-14 | 75.9 |
| MS.gene90567.t1 | AT5G11320 | 25.326 | 383 | 199 | 17 | 7 | 376 | 19 | 327 | 6.71e-14 | 73.9 |
| MS.gene90567.t1 | AT5G11320 | 25.326 | 383 | 199 | 17 | 7 | 376 | 19 | 327 | 1.09e-13 | 73.2 |
| MS.gene90567.t1 | AT5G07800 | 26.154 | 260 | 128 | 9 | 3 | 229 | 14 | 242 | 1.61e-13 | 73.2 |
| MS.gene90567.t1 | AT5G43890 | 25.867 | 375 | 215 | 18 | 7 | 376 | 27 | 343 | 1.62e-13 | 72.8 |
| MS.gene90567.t1 | AT4G32540 | 27.823 | 248 | 133 | 12 | 7 | 251 | 23 | 227 | 1.65e-13 | 72.8 |
| MS.gene90567.t1 | AT1G04610 | 26.075 | 372 | 219 | 15 | 7 | 376 | 39 | 356 | 4.09e-13 | 71.6 |
| MS.gene90567.t1 | AT1G65860 | 23.622 | 254 | 134 | 7 | 3 | 229 | 11 | 231 | 4.38e-13 | 71.6 |
| MS.gene90567.t1 | AT1G62620 | 25.896 | 251 | 132 | 8 | 5 | 229 | 13 | 235 | 5.73e-13 | 71.2 |
| MS.gene90567.t1 | AT1G62620 | 25.896 | 251 | 132 | 8 | 5 | 229 | 13 | 235 | 7.70e-13 | 70.9 |
| MS.gene90567.t1 | AT1G63370 | 25.498 | 251 | 133 | 8 | 5 | 229 | 13 | 235 | 2.04e-12 | 68.9 |
| MS.gene90567.t1 | AT1G63370 | 25.498 | 251 | 133 | 8 | 5 | 229 | 13 | 235 | 2.83e-12 | 69.3 |
| MS.gene90567.t1 | AT4G13260 | 23.906 | 297 | 172 | 12 | 7 | 288 | 30 | 287 | 3.70e-12 | 67.8 |
| MS.gene90567.t1 | AT1G21430 | 26.005 | 373 | 209 | 17 | 5 | 374 | 9 | 317 | 4.20e-12 | 68.6 |
| MS.gene90567.t1 | AT4G13260 | 23.906 | 297 | 172 | 12 | 7 | 288 | 30 | 287 | 9.75e-12 | 67.4 |
Find 94 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCTATCATTGCCAATTT+TGG | 0.050890 | 2.1:+41391676 | None:intergenic |
| TCTCCTAGATTTCAACATTT+TGG | 0.064568 | 2.1:-41392764 | MS.gene90567:CDS |
| TTGAACTGTCAATGTAATTT+TGG | 0.131877 | 2.1:+41392208 | None:intergenic |
| AATAACTACATCTGTTTCTA+AGG | 0.224263 | 2.1:+41392290 | None:intergenic |
| CCCGGAGAACACTTCCTTCT+TGG | 0.233331 | 2.1:-41392685 | MS.gene90567:CDS |
| TGGAGAAGGATGTTAAATTA+TGG | 0.235292 | 2.1:-41391555 | MS.gene90567:CDS |
| ACACTTCCTTCTTGGCCTTT+TGG | 0.237410 | 2.1:-41392677 | MS.gene90567:CDS |
| CCCAAGGAAAATCTGAAAAT+TGG | 0.266448 | 2.1:+41396021 | None:intergenic |
| AGGTAAGGTTATGCATTCTA+TGG | 0.272924 | 2.1:-41393053 | MS.gene90567:CDS |
| GAAAATTGGTATGCTTGTTT+TGG | 0.274150 | 2.1:+41396035 | None:intergenic |
| ACATCCTCGCATCCCAAAAT+TGG | 0.284230 | 2.1:-41391689 | MS.gene90567:CDS |
| GAAATATCTGCATGTCAAAT+TGG | 0.294249 | 2.1:-41392426 | MS.gene90567:CDS |
| TACCTTTGTTGAGAAATTCT+TGG | 0.304695 | 2.1:+41395773 | None:intergenic |
| GAATCTTATGTAAGGAATAA+TGG | 0.308729 | 2.1:+41395923 | None:intergenic |
| ATATGAAGTCATGGGAATTA+TGG | 0.316758 | 2.1:-41395854 | MS.gene90567:CDS |
| GCGGAGCTATTTGAACCATA+TGG | 0.339270 | 2.1:-41391403 | MS.gene90567:CDS |
| AAAATTACATTGACAGTTCA+AGG | 0.349499 | 2.1:-41392206 | MS.gene90567:CDS |
| TCTTGAAGAAAACTATGATT+AGG | 0.356221 | 2.1:+41392447 | None:intergenic |
| CTTTGCATTGGGAAATATAG+TGG | 0.362241 | 2.1:-41393127 | MS.gene90567:CDS |
| ACCATTTGCATCTGCGCATT+CGG | 0.365561 | 2.1:+41392934 | None:intergenic |
| GAAACCAGCGCGCAGTTCTA+TGG | 0.366149 | 2.1:+41392785 | None:intergenic |
| ATTCTTGCCACAGGATATAA+AGG | 0.366577 | 2.1:-41392270 | MS.gene90567:CDS |
| AATAAGAGAGTTACAGTAGT+AGG | 0.371604 | 2.1:-41392986 | MS.gene90567:CDS |
| AGTGGTAATGGATGTCCTTT+TGG | 0.374311 | 2.1:-41395831 | MS.gene90567:CDS |
| TGCAAATATGCTCTACAGAT+TGG | 0.376558 | 2.1:-41396140 | MS.gene90567:CDS |
| GGGAGGAACTCTGGAATGTT+TGG | 0.377591 | 2.1:+41393100 | None:intergenic |
| TGCCCAAAATGTTGAAATCT+AGG | 0.386822 | 2.1:+41392761 | None:intergenic |
| GTTATTGATATTGATTATGT+TGG | 0.393997 | 2.1:-41395891 | MS.gene90567:CDS |
| GGAGAAGGATGTTAAATTAT+GGG | 0.394999 | 2.1:-41391554 | MS.gene90567:CDS |
| TTGGAATTGAATCTTATGTA+AGG | 0.401516 | 2.1:+41395915 | None:intergenic |
| GCCAAGAAGGAAGTGTTCTC+CGG | 0.407386 | 2.1:+41392684 | None:intergenic |
| TTCTATGGATTACTCTTCCT+TGG | 0.411045 | 2.1:-41393038 | MS.gene90567:CDS |
| TGGTGATTTCTTTATCATGA+TGG | 0.414917 | 2.1:+41392362 | None:intergenic |
| AAGTTGCCACTGAAGAAGTA+TGG | 0.417922 | 2.1:-41392477 | MS.gene90567:CDS |
| GTTCAAGGATTTCTCTCTAT+AGG | 0.419814 | 2.1:-41392191 | MS.gene90567:intron |
| TCTAGAACTTGCTTATTACT+TGG | 0.420077 | 2.1:+41395975 | None:intergenic |
| CGGAGCTATTTGAACCATAT+GGG | 0.422701 | 2.1:-41391402 | MS.gene90567:CDS |
| TTGTTGAAACATATCTGAAA+TGG | 0.425780 | 2.1:-41392500 | MS.gene90567:CDS |
| AGCTTTAGCTTCTGCAAAGA+AGG | 0.428456 | 2.1:-41392339 | MS.gene90567:CDS |
| TTATAATCAGTGGGCCCATA+TGG | 0.433595 | 2.1:+41391388 | None:intergenic |
| GCATTGTTACTTGTGGCATA+TGG | 0.438868 | 2.1:-41391486 | MS.gene90567:CDS |
| ATAATCAATATCAATAACTT+TGG | 0.441168 | 2.1:+41395896 | None:intergenic |
| ATGATGGTGTTGGAGGACTA+TGG | 0.447006 | 2.1:-41396091 | MS.gene90567:CDS |
| AGTTTGTTATTCTTTGCATT+GGG | 0.451815 | 2.1:-41393138 | MS.gene90567:CDS |
| GAGTTTGTTATTCTTTGCAT+TGG | 0.462117 | 2.1:-41393139 | MS.gene90567:CDS |
| TGTAATATGCCATGTTCCCT+TGG | 0.468200 | 2.1:+41395806 | None:intergenic |
| TGGGAATTATGGAGTGGTAA+TGG | 0.469776 | 2.1:-41395843 | MS.gene90567:CDS |
| CCAGAGTTCCTCCCTGGAAA+AGG | 0.479687 | 2.1:-41393091 | MS.gene90567:CDS |
| TATGGGCCCACTGATTATAA+TGG | 0.482729 | 2.1:-41391385 | MS.gene90567:CDS |
| GGCCACCTTACTATCACCAT+TGG | 0.485362 | 2.1:-41392656 | MS.gene90567:intron |
| TTGGTCACCTTTATATCCTG+TGG | 0.488352 | 2.1:+41392263 | None:intergenic |
| TCTTACCAATGGTGATAGTA+AGG | 0.489855 | 2.1:+41392651 | None:intergenic |
| AGAGTTGCAATTGTTGGTGC+AGG | 0.491948 | 2.1:-41396182 | MS.gene90567:CDS |
| AACATTCCAGAGTTCCTCCC+TGG | 0.496220 | 2.1:-41393097 | MS.gene90567:CDS |
| TCATCAGCTTCATATACAAC+AGG | 0.497177 | 2.1:+41396110 | None:intergenic |
| AACAAGACCATTATAATCAG+TGG | 0.502752 | 2.1:+41391378 | None:intergenic |
| ATCCCAAAATTGGCAATGAT+AGG | 0.503683 | 2.1:-41391679 | MS.gene90567:CDS |
| AGAGTTACAGTAGTAGGCTC+AGG | 0.504894 | 2.1:-41392980 | MS.gene90567:CDS |
| AAAAGACCCTTCTTTCTCCT+CGG | 0.506769 | 2.1:+41391427 | None:intergenic |
| CTAGAAAATGTGCTAACCAT+TGG | 0.509768 | 2.1:+41391611 | None:intergenic |
| CATGTTCCCTTGGAGCCAAA+AGG | 0.521090 | 2.1:+41395816 | None:intergenic |
| GTGATAGTAAGGTGGCCAAA+AGG | 0.527800 | 2.1:+41392662 | None:intergenic |
| GATGTAGTTATTCTTGCCAC+AGG | 0.531258 | 2.1:-41392279 | MS.gene90567:CDS |
| CTGATGAAGATATGAAGTCA+TGG | 0.535713 | 2.1:-41395863 | MS.gene90567:CDS |
| TATGAAGCTGATGATGGTGT+TGG | 0.543117 | 2.1:-41396101 | MS.gene90567:CDS |
| AGGTGGCCAAAAGGCCAAGA+AGG | 0.545267 | 2.1:+41392671 | None:intergenic |
| CCAAGAAGGAAGTGTTCTCC+GGG | 0.546254 | 2.1:+41392685 | None:intergenic |
| ATAACTACATCTGTTTCTAA+GGG | 0.546830 | 2.1:+41392291 | None:intergenic |
| GCCGAATGCGCAGATGCAAA+TGG | 0.549258 | 2.1:-41392935 | MS.gene90567:intron |
| GTGTAATCCGAGGAGAAAGA+AGG | 0.551929 | 2.1:-41391434 | MS.gene90567:CDS |
| TCTTTGCAGAAGCTAAAGCT+TGG | 0.562474 | 2.1:+41392342 | None:intergenic |
| GTTGTATATGAAGCTGATGA+TGG | 0.564559 | 2.1:-41396107 | MS.gene90567:CDS |
| GAAGCTGATGATGGTGTTGG+AGG | 0.565452 | 2.1:-41396098 | MS.gene90567:CDS |
| ATTGCCTAGTATAAAAGAGA+TGG | 0.565732 | 2.1:-41391575 | MS.gene90567:CDS |
| TACCAAGAATTTCTCAACAA+AGG | 0.578314 | 2.1:-41395775 | MS.gene90567:intron |
| TGATGAAGATATGAAGTCAT+GGG | 0.593792 | 2.1:-41395862 | MS.gene90567:CDS |
| GGCAATGATAGGATATGCTG+AGG | 0.603017 | 2.1:-41391668 | MS.gene90567:CDS |
| AGATCATGCATTGTTACTTG+TGG | 0.603581 | 2.1:-41391493 | MS.gene90567:CDS |
| GTTCTATGGATAATCGTGCA+AGG | 0.619433 | 2.1:+41392799 | None:intergenic |
| GAGCATATTTGCAAGCAAGT+AGG | 0.621227 | 2.1:+41396150 | None:intergenic |
| TTCTATGGATAATCGTGCAA+GGG | 0.621581 | 2.1:+41392800 | None:intergenic |
| ATTGTTGGTGCAGGAATCAG+TGG | 0.624826 | 2.1:-41396173 | MS.gene90567:CDS |
| TTATCCATAGAACTGCGCGC+TGG | 0.626391 | 2.1:-41392789 | MS.gene90567:CDS |
| ACAAGACCATTATAATCAGT+GGG | 0.632491 | 2.1:+41391379 | None:intergenic |
| TAGTATAAAAGAGATGGAGA+AGG | 0.639486 | 2.1:-41391569 | MS.gene90567:CDS |
| TGTAATCCGAGGAGAAAGAA+GGG | 0.645189 | 2.1:-41391433 | MS.gene90567:CDS |
| ACTAGTCCATACTTCTTCAG+TGG | 0.645916 | 2.1:+41392471 | None:intergenic |
| GAGACATGAAGTGTAATCCG+AGG | 0.647245 | 2.1:-41391444 | MS.gene90567:CDS |
| CTAATGAAATGAGATGCCAA+TGG | 0.660576 | 2.1:-41391627 | MS.gene90567:CDS |
| TACCAATGGTGATAGTAAGG+TGG | 0.665277 | 2.1:+41392654 | None:intergenic |
| AAGTCATGGGAATTATGGAG+TGG | 0.671476 | 2.1:-41395849 | MS.gene90567:CDS |
| GGGAACATGGCATATTACAG+TGG | 0.699925 | 2.1:-41395802 | MS.gene90567:CDS |
| GCAATGATAGGATATGCTGA+GGG | 0.702690 | 2.1:-41391667 | MS.gene90567:CDS |
| ATGGTGTTGGAGGACTATGG+AGG | 0.798552 | 2.1:-41396088 | MS.gene90567:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACCAAAAATTAATATATT+CGG | + | chr2.1:41393804-41393823 | None:intergenic | 10.0% |
| !!! | AAAAATCTAAAATAAACATA+AGG | - | chr2.1:41394200-41394219 | MS.gene90567:intron | 10.0% |
| !!! | AAAATCTAAAATAAACATAA+GGG | - | chr2.1:41394201-41394220 | MS.gene90567:intron | 10.0% |
| !!! | ATATTAAAATTGTGTTTTTA+TGG | - | chr2.1:41392157-41392176 | MS.gene90567:intron | 10.0% |
| !!! | TTAAAACTTTTAAAACATAA+CGG | + | chr2.1:41393871-41393890 | None:intergenic | 10.0% |
| !!! | TTAAAATTTTTAAAACGTAA+GGG | + | chr2.1:41393900-41393919 | None:intergenic | 10.0% |
| !!! | TTCTCAATTTTTTTATAATA+AGG | - | chr2.1:41392706-41392725 | MS.gene90567:CDS | 10.0% |
| !!! | TTTGTATCAAATTTTTAAAT+TGG | - | chr2.1:41392369-41392388 | MS.gene90567:CDS | 10.0% |
| !! | AAAAAAAATTTCAGGATAAT+TGG | + | chr2.1:41392211-41392230 | None:intergenic | 15.0% |
| !! | AAAAAAATTTCAGGATAATT+GGG | + | chr2.1:41392210-41392229 | None:intergenic | 15.0% |
| !! | AATTGAGAAAATTATCAAAT+TGG | + | chr2.1:41392695-41392714 | None:intergenic | 15.0% |
| !! | ACATTAAAAAAATTATACTC+CGG | + | chr2.1:41393295-41393314 | None:intergenic | 15.0% |
| !! | ACTCTATTAATAACTTAAAA+TGG | + | chr2.1:41392636-41392655 | None:intergenic | 15.0% |
| !! | ATAATCAATATCAATAACTT+TGG | + | chr2.1:41391667-41391686 | None:intergenic | 15.0% |
| !! | GAAAATTGTACATTTAATAT+AGG | + | chr2.1:41392925-41392944 | None:intergenic | 15.0% |
| !! | TCTTACAAAAACAAATAAAT+TGG | + | chr2.1:41394972-41394991 | None:intergenic | 15.0% |
| !! | TTAAAACCTAAAATACATAA+TGG | + | chr2.1:41393842-41393861 | None:intergenic | 15.0% |
| !! | TTGACAAGAAATAATATTTA+GGG | - | chr2.1:41392239-41392258 | MS.gene90567:CDS | 15.0% |
| !! | TTTGACAAGAAATAATATTT+AGG | - | chr2.1:41392238-41392257 | MS.gene90567:CDS | 15.0% |
| !!! | AATATTCCAGAAAATTTTAT+TGG | - | chr2.1:41396044-41396063 | MS.gene90567:CDS | 15.0% |
| !!! | AGATTTTTTAGATTTTAAGT+TGG | + | chr2.1:41394188-41394207 | None:intergenic | 15.0% |
| !!! | AGTTAAATTTGCTTATATTT+AGG | - | chr2.1:41393268-41393287 | MS.gene90567:intron | 15.0% |
| !!! | ATAAGCAAATTTAACTTTTT+AGG | + | chr2.1:41393264-41393283 | None:intergenic | 15.0% |
| !!! | ATTGCTTTAAAAAAAATTTC+AGG | + | chr2.1:41392219-41392238 | None:intergenic | 15.0% |
| !!! | CTTAAAATTTTTAAAACGTA+AGG | + | chr2.1:41393901-41393920 | None:intergenic | 15.0% |
| !!! | TATGTTTTATATGTATTTGT+AGG | + | chr2.1:41395453-41395472 | None:intergenic | 15.0% |
| !!! | TTCATATTTCATTTTCTTTT+TGG | - | chr2.1:41391852-41391871 | MS.gene90567:intron | 15.0% |
| !!! | TTCTTTTACTTTATCAAAAA+AGG | + | chr2.1:41395174-41395193 | None:intergenic | 15.0% |
| !!! | TTGAAACTTTTAAAACATAA+GGG | - | chr2.1:41394132-41394151 | MS.gene90567:intron | 15.0% |
| !!! | TTTTTTGATAAAGTAAAAGA+AGG | - | chr2.1:41395173-41395192 | MS.gene90567:intron | 15.0% |
| !! | AAATATGTAAACCACTAAAT+TGG | + | chr2.1:41395780-41395799 | None:intergenic | 20.0% |
| !! | AAATTCTCTATACTAATCTA+TGG | - | chr2.1:41395826-41395845 | MS.gene90567:CDS | 20.0% |
| !! | AGAAACATTAGAGATAAATA+AGG | - | chr2.1:41391938-41391957 | MS.gene90567:intron | 20.0% |
| !! | CAAATCATACATAAGAAAAT+AGG | + | chr2.1:41395428-41395447 | None:intergenic | 20.0% |
| !! | GAAACATTAGAGATAAATAA+GGG | - | chr2.1:41391939-41391958 | MS.gene90567:intron | 20.0% |
| !! | TTGAAATATTAATAGAGTCA+AGG | + | chr2.1:41395593-41395612 | None:intergenic | 20.0% |
| !! | TTTCATAATTACAAATGTGT+TGG | - | chr2.1:41391879-41391898 | MS.gene90567:intron | 20.0% |
| !!! | AATTTAAGATTAGCTTACAA+AGG | + | chr2.1:41395567-41395586 | None:intergenic | 20.0% |
| !!! | AGTCAAATTTGCTTATATTT+AGG | + | chr2.1:41393171-41393190 | None:intergenic | 20.0% |
| !!! | ATGTATTTTAGGTTTTAAGT+TGG | - | chr2.1:41393844-41393863 | MS.gene90567:intron | 20.0% |
| !!! | ATGTTTTAAAAGTTTCAAGT+TGG | + | chr2.1:41394130-41394149 | None:intergenic | 20.0% |
| !!! | CAATTTCACAATTTTAACAA+AGG | - | chr2.1:41392132-41392151 | MS.gene90567:intron | 20.0% |
| !!! | CTATTTTCTTATGTATGATT+TGG | - | chr2.1:41395426-41395445 | MS.gene90567:intron | 20.0% |
| !!! | CTCTAGTAAAACTATATTTT+GGG | + | chr2.1:41392012-41392031 | None:intergenic | 20.0% |
| !!! | CTTGAAACTTTTAAAACATA+AGG | - | chr2.1:41394131-41394150 | MS.gene90567:intron | 20.0% |
| !!! | GTTATTGATATTGATTATGT+TGG | - | chr2.1:41391669-41391688 | MS.gene90567:CDS | 20.0% |
| !!! | TAACCAAAAATTGACTTTTT+AGG | - | chr2.1:41393354-41393373 | MS.gene90567:intron | 20.0% |
| !!! | TAAGCAAAAATTCACTTTTT+AGG | + | chr2.1:41393442-41393461 | None:intergenic | 20.0% |
| !!! | TATAAGCAAATTTGACTTTT+TGG | - | chr2.1:41393174-41393193 | MS.gene90567:intron | 20.0% |
| !!! | TCAATGTAATTTTGGAATAT+TGG | + | chr2.1:41395347-41395366 | None:intergenic | 20.0% |
| !!! | TCTCTAGTAAAACTATATTT+TGG | + | chr2.1:41392013-41392032 | None:intergenic | 20.0% |
| !!! | TGAATATGCTTTTAAGTTTT+TGG | + | chr2.1:41395319-41395338 | None:intergenic | 20.0% |
| !!! | TTGAAACTTTTAAGACATAA+AGG | - | chr2.1:41394161-41394180 | MS.gene90567:intron | 20.0% |
| !!! | TTTATTTTAGATAGAAGAGA+TGG | - | chr2.1:41392970-41392989 | MS.gene90567:CDS | 20.0% |
| !!! | TTTGATCCATTATGTATTTT+AGG | - | chr2.1:41393833-41393852 | MS.gene90567:intron | 20.0% |
| !!! | TTTTTGGTTATAATAATGAC+CGG | + | chr2.1:41393344-41393363 | None:intergenic | 20.0% |
| ! | AAAAATTAATATATTCGGCG+GGG | + | chr2.1:41393799-41393818 | None:intergenic | 25.0% |
| ! | AAGAGTTTACAAGGATATAT+TGG | + | chr2.1:41394259-41394278 | None:intergenic | 25.0% |
| ! | ACAAAACATCTAATAGAGTT+GGG | + | chr2.1:41392458-41392477 | None:intergenic | 25.0% |
| ! | ACAAAGTTAAAGAGTTTACA+AGG | + | chr2.1:41394268-41394287 | None:intergenic | 25.0% |
| ! | ACTTTATCAAAAAAGGAATC+AGG | + | chr2.1:41395167-41395186 | None:intergenic | 25.0% |
| ! | AGAGATAAATAAGGGAAATA+TGG | - | chr2.1:41391947-41391966 | MS.gene90567:intron | 25.0% |
| ! | AGTTTCTAAATTTCTGTCTT+TGG | - | chr2.1:41393007-41393026 | MS.gene90567:CDS | 25.0% |
| ! | ATAGTATTGTTGTAATGCAA+AGG | + | chr2.1:41394361-41394380 | None:intergenic | 25.0% |
| ! | ATTATCAACAAATCACAATG+TGG | + | chr2.1:41393136-41393155 | None:intergenic | 25.0% |
| ! | CAAAAATTAATATATTCGGC+GGG | + | chr2.1:41393800-41393819 | None:intergenic | 25.0% |
| ! | CATCTAATAAATGAAGTATG+TGG | - | chr2.1:41393379-41393398 | MS.gene90567:intron | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | - | chr2.1:41393200-41393219 | MS.gene90567:intron | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | + | chr2.1:41393219-41393200 | None:intergenic | 25.0% |
| ! | CCAAAAATTAATATATTCGG+CGG | + | chr2.1:41393801-41393820 | None:intergenic | 25.0% |
| ! | CTTTATCAAAAAAGGAATCA+GGG | + | chr2.1:41395166-41395185 | None:intergenic | 25.0% |
| ! | GAATCTTATGTAAGGAATAA+TGG | + | chr2.1:41391640-41391659 | None:intergenic | 25.0% |
| ! | GACTGAATATTTACAAAAAC+AGG | - | chr2.1:41394387-41394406 | MS.gene90567:intron | 25.0% |
| ! | GAGCTATACTATTAAGAAAA+GGG | - | chr2.1:41392828-41392847 | MS.gene90567:intron | 25.0% |
| ! | TAAAGATTAACATGCTATCA+TGG | - | chr2.1:41394322-41394341 | MS.gene90567:intron | 25.0% |
| ! | TACAAAACATCTAATAGAGT+TGG | + | chr2.1:41392459-41392478 | None:intergenic | 25.0% |
| ! | TAGTATTGTTGTAATGCAAA+GGG | + | chr2.1:41394360-41394379 | None:intergenic | 25.0% |
| ! | TCTTGAAGAAAACTATGATT+AGG | + | chr2.1:41395116-41395135 | None:intergenic | 25.0% |
| ! | TGAGCTATACTATTAAGAAA+AGG | - | chr2.1:41392827-41392846 | MS.gene90567:intron | 25.0% |
| ! | TGTAGCAAAAACATAGATAA+AGG | + | chr2.1:41395659-41395678 | None:intergenic | 25.0% |
| ! | TTAAACTCAATATCATGTTG+CGG | + | chr2.1:41393966-41393985 | None:intergenic | 25.0% |
| ! | TTCTCAAATGTTTCTTAGAT+TGG | - | chr2.1:41392430-41392449 | MS.gene90567:CDS | 25.0% |
| ! | TTGGAATTGAATCTTATGTA+AGG | + | chr2.1:41391648-41391667 | None:intergenic | 25.0% |
| ! | TTGTTGAAACATATCTGAAA+TGG | - | chr2.1:41395060-41395079 | MS.gene90567:intron | 25.0% |
| !! | AATTTGCTTATATTTAGGAC+CGG | - | chr2.1:41393273-41393292 | MS.gene90567:intron | 25.0% |
| !! | AATTTGCTTATATTTAGGAC+CGG | + | chr2.1:41393292-41393273 | None:intergenic | 25.0% |
| !! | ATGTCTTAAAAGTTTCAAGT+TGG | + | chr2.1:41394159-41394178 | None:intergenic | 25.0% |
| !! | ATTTTATGGTATCCCTATAA+CGG | + | chr2.1:41392753-41392772 | None:intergenic | 25.0% |
| !! | GAACCTAAAAAGTCAATTTT+TGG | + | chr2.1:41393360-41393379 | None:intergenic | 25.0% |
| !! | GTCTTTTGGATATTATTTAG+TGG | + | chr2.1:41392533-41392552 | None:intergenic | 25.0% |
| !! | GTTAATGACATAATGTCTTT+TGG | + | chr2.1:41392511-41392530 | None:intergenic | 25.0% |
| !! | TAGTGGTTTACATATTTTCT+AGG | - | chr2.1:41395783-41395802 | MS.gene90567:CDS | 25.0% |
| !! | TCTAGAGTAAATCATCAAAT+TGG | - | chr2.1:41392338-41392357 | MS.gene90567:CDS | 25.0% |
| !! | TGATCTCCAATAAAATTTTC+TGG | + | chr2.1:41396053-41396072 | None:intergenic | 25.0% |
| !!! | AAAATTGGTATGCTTGTTTT+GGG | + | chr2.1:41391527-41391546 | None:intergenic | 25.0% |
| !!! | AATAACTACATCTGTTTCTA+AGG | + | chr2.1:41395273-41395292 | None:intergenic | 25.0% |
| !!! | AGTTTGTTATTCTTTGCATT+GGG | - | chr2.1:41394422-41394441 | MS.gene90567:intron | 25.0% |
| !!! | ATAACTACATCTGTTTCTAA+GGG | + | chr2.1:41395272-41395291 | None:intergenic | 25.0% |
| AACAAGACCATTATAATCAG+TGG | + | chr2.1:41396185-41396204 | None:intergenic | 30.0% | |
| AATAAGAGAGTTACAGTAGT+AGG | - | chr2.1:41394574-41394593 | MS.gene90567:intron | 30.0% | |
| AATGCCAACTCATAAAATTC+AGG | + | chr2.1:41393592-41393611 | None:intergenic | 30.0% | |
| ACAAAACAACTAATAGAGTC+AGG | - | chr2.1:41392576-41392595 | MS.gene90567:intron | 30.0% | |
| ACAAGACCATTATAATCAGT+GGG | + | chr2.1:41396184-41396203 | None:intergenic | 30.0% | |
| ACCAGAGAAAAATCTTATTG+TGG | + | chr2.1:41392110-41392129 | None:intergenic | 30.0% | |
| ACTACAATGTATCTTACCAA+TGG | + | chr2.1:41394923-41394942 | None:intergenic | 30.0% | |
| ACTTGACCGATTAAAGATTT+GGG | + | chr2.1:41394064-41394083 | None:intergenic | 30.0% | |
| AGAACCAAATAAGTCTATCA+AGG | + | chr2.1:41393494-41393513 | None:intergenic | 30.0% | |
| AGTACCTTGATAGACTTATT+TGG | - | chr2.1:41393487-41393506 | MS.gene90567:intron | 30.0% | |
| AGTGAAATAATTACTTCCTC+CGG | - | chr2.1:41393322-41393341 | MS.gene90567:intron | 30.0% | |
| ATAGGTGAGAATGAAACAAA+GGG | - | chr2.1:41392302-41392321 | MS.gene90567:CDS | 30.0% | |
| ATATGAAGTCATGGGAATTA+TGG | - | chr2.1:41391706-41391725 | MS.gene90567:intron | 30.0% | |
| ATTGCCTAGTATAAAAGAGA+TGG | - | chr2.1:41395985-41396004 | MS.gene90567:CDS | 30.0% | |
| CAAAACAACTAATAGAGTCA+GGG | - | chr2.1:41392577-41392596 | MS.gene90567:intron | 30.0% | |
| CAAATGACTTACACTTAACT+TGG | + | chr2.1:41392805-41392824 | None:intergenic | 30.0% | |
| CAAGTTAAGTGTAAGTCATT+TGG | - | chr2.1:41392803-41392822 | MS.gene90567:CDS | 30.0% | |
| CATTCAATAAACGATGTATG+TGG | + | chr2.1:41393417-41393436 | None:intergenic | 30.0% | |
| GAAAAAAGAGTTGCAATTGT+TGG | - | chr2.1:41391372-41391391 | MS.gene90567:CDS | 30.0% | |
| GAAATATCTGCATGTCAAAT+TGG | - | chr2.1:41395134-41395153 | MS.gene90567:intron | 30.0% | |
| GATGTATGTGGTTCATATTA+TGG | + | chr2.1:41393227-41393246 | None:intergenic | 30.0% | |
| GGAGAAGGATGTTAAATTAT+GGG | - | chr2.1:41396006-41396025 | MS.gene90567:CDS | 30.0% | |
| TACCAAGAATTTCTCAACAA+AGG | - | chr2.1:41391785-41391804 | MS.gene90567:intron | 30.0% | |
| TACCTTTGTTGAGAAATTCT+TGG | + | chr2.1:41391790-41391809 | None:intergenic | 30.0% | |
| TAGTATAAAAGAGATGGAGA+AGG | - | chr2.1:41395991-41396010 | MS.gene90567:CDS | 30.0% | |
| TATAACAGTGAGTTAATGAC+CGG | - | chr2.1:41393460-41393479 | MS.gene90567:intron | 30.0% | |
| TCATCTGCCACATTAATTTA+TGG | - | chr2.1:41393527-41393546 | MS.gene90567:intron | 30.0% | |
| TGATGAAGATATGAAGTCAT+GGG | - | chr2.1:41391698-41391717 | MS.gene90567:CDS | 30.0% | |
| TGGAGAAGGATGTTAAATTA+TGG | - | chr2.1:41396005-41396024 | MS.gene90567:CDS | 30.0% | |
| TGGTGATTTCTTTATCATGA+TGG | + | chr2.1:41395201-41395220 | None:intergenic | 30.0% | |
| TGTCAACCCAAATCTTTAAT+CGG | - | chr2.1:41394055-41394074 | MS.gene90567:intron | 30.0% | |
| TTAAGACTTAATTGCGTGTT+TGG | + | chr2.1:41394228-41394247 | None:intergenic | 30.0% | |
| TTAATTTATGGTCCAACGAT+TGG | - | chr2.1:41393539-41393558 | MS.gene90567:intron | 30.0% | |
| TTCAATCCATTAACTTCTAC+AGG | - | chr2.1:41394728-41394747 | MS.gene90567:intron | 30.0% | |
| TTTGTTTCATTCTCACCTAT+GGG | + | chr2.1:41392302-41392321 | None:intergenic | 30.0% | |
| ! | ACCAATTTTCAGATTTTCCT+TGG | - | chr2.1:41391538-41391557 | MS.gene90567:CDS | 30.0% |
| ! | ACCACAATAAGATTTTTCTC+TGG | - | chr2.1:41392106-41392125 | MS.gene90567:intron | 30.0% |
| ! | ACTCTAAATTTTCAGAGATG+GGG | - | chr2.1:41395026-41395045 | MS.gene90567:intron | 30.0% |
| ! | ATCCTATCATTGCCAATTTT+GGG | + | chr2.1:41395886-41395905 | None:intergenic | 30.0% |
| ! | CAACTCATAAAATTCAGGTT+GGG | + | chr2.1:41393587-41393606 | None:intergenic | 30.0% |
| ! | CACTCTAAATTTTCAGAGAT+GGG | - | chr2.1:41395025-41395044 | MS.gene90567:intron | 30.0% |
| ! | CCAATTTTCAGATTTTCCTT+GGG | - | chr2.1:41391539-41391558 | MS.gene90567:CDS | 30.0% |
| ! | CCGCCGAATATATTAATTTT+TGG | - | chr2.1:41393798-41393817 | MS.gene90567:intron | 30.0% |
| ! | CTCCTAGATTTCAACATTTT+GGG | - | chr2.1:41394797-41394816 | MS.gene90567:intron | 30.0% |
| ! | GAAAATTGGTATGCTTGTTT+TGG | + | chr2.1:41391528-41391547 | None:intergenic | 30.0% |
| ! | TATCCTATCATTGCCAATTT+TGG | + | chr2.1:41395887-41395906 | None:intergenic | 30.0% |
| ! | TCTAGAACTTGCTTATTACT+TGG | + | chr2.1:41391588-41391607 | None:intergenic | 30.0% |
| ! | TCTCCTAGATTTCAACATTT+TGG | - | chr2.1:41394796-41394815 | MS.gene90567:intron | 30.0% |
| ! | TGTGATACGCTTGATTTTAA+GGG | + | chr2.1:41393730-41393749 | None:intergenic | 30.0% |
| ! | TTCTCCATCTCTTTTATACT+AGG | + | chr2.1:41395992-41396011 | None:intergenic | 30.0% |
| ! | TTGTGATACGCTTGATTTTA+AGG | + | chr2.1:41393731-41393750 | None:intergenic | 30.0% |
| !! | GAGTTTGTTATTCTTTGCAT+TGG | - | chr2.1:41394421-41394440 | MS.gene90567:intron | 30.0% |
| !! | GTTTACATATTTTCTAGGAG+TGG | - | chr2.1:41395788-41395807 | MS.gene90567:CDS | 30.0% |
| !! | TGAATTTTATGAGTTGGCAT+TGG | - | chr2.1:41393591-41393610 | MS.gene90567:intron | 30.0% |
| AATCTATGGTAAACCACTAC+AGG | - | chr2.1:41395840-41395859 | MS.gene90567:CDS | 35.0% | |
| ACCTTACCTGTAAAAACTTC+TGG | + | chr2.1:41394496-41394515 | None:intergenic | 35.0% | |
| AGGTAAGGTTATGCATTCTA+TGG | - | chr2.1:41394507-41394526 | MS.gene90567:intron | 35.0% | |
| ATCCCAAAATTGGCAATGAT+AGG | - | chr2.1:41395881-41395900 | MS.gene90567:CDS | 35.0% | |
| ATCTTTAATCGGTCAAGTGA+CGG | - | chr2.1:41394066-41394085 | MS.gene90567:intron | 35.0% | |
| ATTCCAACGTGAATAACGTA+AGG | + | chr2.1:41393930-41393949 | None:intergenic | 35.0% | |
| ATTCTTGCCACAGGATATAA+AGG | - | chr2.1:41395290-41395309 | MS.gene90567:intron | 35.0% | |
| CACTTGACCGATTAAAGATT+TGG | + | chr2.1:41394065-41394084 | None:intergenic | 35.0% | |
| CATAGGTGAGAATGAAACAA+AGG | - | chr2.1:41392301-41392320 | MS.gene90567:CDS | 35.0% | |
| CCAACTCATAAAATTCAGGT+TGG | + | chr2.1:41393588-41393607 | None:intergenic | 35.0% | |
| CCCAAGGAAAATCTGAAAAT+TGG | + | chr2.1:41391542-41391561 | None:intergenic | 35.0% | |
| CCTTACCTGTAAAAACTTCT+GGG | + | chr2.1:41394495-41394514 | None:intergenic | 35.0% | |
| CGTTGGACCATAAATTAATG+TGG | + | chr2.1:41393537-41393556 | None:intergenic | 35.0% | |
| CTAATGAAATGAGATGCCAA+TGG | - | chr2.1:41395933-41395952 | MS.gene90567:CDS | 35.0% | |
| CTAGAAAATGTGCTAACCAT+TGG | + | chr2.1:41395952-41395971 | None:intergenic | 35.0% | |
| CTGATGAAGATATGAAGTCA+TGG | - | chr2.1:41391697-41391716 | MS.gene90567:CDS | 35.0% | |
| CTTTGCATTGGGAAATATAG+TGG | - | chr2.1:41394433-41394452 | MS.gene90567:intron | 35.0% | |
| GATGTATTATTTGCCTGTAG+TGG | + | chr2.1:41395856-41395875 | None:intergenic | 35.0% | |
| GTTCAAGGATTTCTCTCTAT+AGG | - | chr2.1:41395369-41395388 | MS.gene90567:intron | 35.0% | |
| GTTGTATATGAAGCTGATGA+TGG | - | chr2.1:41391453-41391472 | MS.gene90567:CDS | 35.0% | |
| TACAAAGGCAGAGATCAAAT+TGG | + | chr2.1:41395552-41395571 | None:intergenic | 35.0% | |
| TACAGTAGTGACCAATTTAG+TGG | - | chr2.1:41395766-41395785 | MS.gene90567:intron | 35.0% | |
| TCATCAGCTTCATATACAAC+AGG | + | chr2.1:41391453-41391472 | None:intergenic | 35.0% | |
| TCTTACCAATGGTGATAGTA+AGG | + | chr2.1:41394912-41394931 | None:intergenic | 35.0% | |
| TGCAAATATGCTCTACAGAT+TGG | - | chr2.1:41391420-41391439 | MS.gene90567:CDS | 35.0% | |
| TGCCCAAAATGTTGAAATCT+AGG | + | chr2.1:41394802-41394821 | None:intergenic | 35.0% | |
| TTCCAACGTGAATAACGTAA+GGG | + | chr2.1:41393929-41393948 | None:intergenic | 35.0% | |
| TTCTATGGATAATCGTGCAA+GGG | + | chr2.1:41394763-41394782 | None:intergenic | 35.0% | |
| TTGGTTATAATAATGACCGG+AGG | + | chr2.1:41393341-41393360 | None:intergenic | 35.0% | |
| TTGTCAAACGCTTCTCAAAT+TGG | + | chr2.1:41392604-41392623 | None:intergenic | 35.0% | |
| ! | AGATCATGCATTGTTACTTG+TGG | - | chr2.1:41396067-41396086 | MS.gene90567:CDS | 35.0% |
| ! | CCAACCTGAATTTTATGAGT+TGG | - | chr2.1:41393585-41393604 | MS.gene90567:intron | 35.0% |
| ! | CCACTCATAAAATTCAGGTT+GGG | + | chr2.1:41393618-41393637 | None:intergenic | 35.0% |
| ! | CTTTGTTTCATTCTCACCTA+TGG | + | chr2.1:41392303-41392322 | None:intergenic | 35.0% |
| ! | GCACTCTAAATTTTCAGAGA+TGG | - | chr2.1:41395024-41395043 | MS.gene90567:intron | 35.0% |
| ! | GGTGGTTTACTCAAGAATTT+TGG | + | chr2.1:41395531-41395550 | None:intergenic | 35.0% |
| ! | GTTAATGACTCGATGTCTTT+TGG | + | chr2.1:41392547-41392566 | None:intergenic | 35.0% |
| ! | TCTTTTACAGAAGAATCCCA+AGG | + | chr2.1:41391558-41391577 | None:intergenic | 35.0% |
| ! | TGGTTAGCACATTTTCTAGA+TGG | - | chr2.1:41395953-41395972 | MS.gene90567:CDS | 35.0% |
| ! | TTCTATGGATTACTCTTCCT+TGG | - | chr2.1:41394522-41394541 | MS.gene90567:intron | 35.0% |
| !! | AAAGATTTGGGTTGACAATG+TGG | + | chr2.1:41394052-41394071 | None:intergenic | 35.0% |
| !! | AACATTTTGGGCATTAGTCT+CGG | - | chr2.1:41394809-41394828 | MS.gene90567:intron | 35.0% |
| !! | AAGATTTGGGTTGACAATGT+GGG | + | chr2.1:41394051-41394070 | None:intergenic | 35.0% |
| !! | TTTGTTGATAATACTCCCTC+CGG | - | chr2.1:41393144-41393163 | MS.gene90567:CDS | 35.0% |
| AAAAGACCCTTCTTTCTCCT+CGG | + | chr2.1:41396136-41396155 | None:intergenic | 40.0% | |
| AAAGGCAGAGATCAAATTGG+TGG | + | chr2.1:41395549-41395568 | None:intergenic | 40.0% | |
| AAGTCATGGGAATTATGGAG+TGG | - | chr2.1:41391711-41391730 | MS.gene90567:intron | 40.0% | |
| AAGTTGCCACTGAAGAAGTA+TGG | - | chr2.1:41395083-41395102 | MS.gene90567:intron | 40.0% | |
| ACTAGTCCATACTTCTTCAG+TGG | + | chr2.1:41395092-41395111 | None:intergenic | 40.0% | |
| ATCCCTTACGTTATTCACGT+TGG | - | chr2.1:41393924-41393943 | MS.gene90567:intron | 40.0% | |
| CGGAGCTATTTGAACCATAT+GGG | - | chr2.1:41396158-41396177 | MS.gene90567:CDS | 40.0% | |
| CTCAATATCATGTTGCGGAA+TGG | + | chr2.1:41393961-41393980 | None:intergenic | 40.0% | |
| GACAGCCACTCATAAAATTC+AGG | + | chr2.1:41393623-41393642 | None:intergenic | 40.0% | |
| GAGCATATTTGCAAGCAAGT+AGG | + | chr2.1:41391413-41391432 | None:intergenic | 40.0% | |
| GATGTAGTTATTCTTGCCAC+AGG | - | chr2.1:41395281-41395300 | MS.gene90567:intron | 40.0% | |
| GCAATGATAGGATATGCTGA+GGG | - | chr2.1:41395893-41395912 | MS.gene90567:CDS | 40.0% | |
| GCCACTCATAAAATTCAGGT+TGG | + | chr2.1:41393619-41393638 | None:intergenic | 40.0% | |
| GTGACTCCTGTAGAAGTTAA+TGG | + | chr2.1:41394737-41394756 | None:intergenic | 40.0% | |
| GTGAGAATGAAACAAAGGGA+TGG | - | chr2.1:41392306-41392325 | MS.gene90567:CDS | 40.0% | |
| GTTCTATGGATAATCGTGCA+AGG | + | chr2.1:41394764-41394783 | None:intergenic | 40.0% | |
| TACCAATGGTGATAGTAAGG+TGG | + | chr2.1:41394909-41394928 | None:intergenic | 40.0% | |
| TCTTTGCAGAAGCTAAAGCT+TGG | + | chr2.1:41395221-41395240 | None:intergenic | 40.0% | |
| TGGGAATTATGGAGTGGTAA+TGG | - | chr2.1:41391717-41391736 | MS.gene90567:intron | 40.0% | |
| TGTAATATGCCATGTTCCCT+TGG | + | chr2.1:41391757-41391776 | None:intergenic | 40.0% | |
| TGTAATCCGAGGAGAAAGAA+GGG | - | chr2.1:41396127-41396146 | MS.gene90567:CDS | 40.0% | |
| TTATAATCAGTGGGCCCATA+TGG | + | chr2.1:41396175-41396194 | None:intergenic | 40.0% | |
| TTGGTCACCTTTATATCCTG+TGG | + | chr2.1:41395300-41395319 | None:intergenic | 40.0% | |
| ! | AAAGGCCCAGAAGTTTTTAC+AGG | - | chr2.1:41394487-41394506 | MS.gene90567:intron | 40.0% |
| ! | AGCAGCATTTTCTTTGTCCA+AGG | + | chr2.1:41394542-41394561 | None:intergenic | 40.0% |
| ! | AGCTTTAGCTTCTGCAAAGA+AGG | - | chr2.1:41395221-41395240 | MS.gene90567:intron | 40.0% |
| ! | CCCAACCTGAATTTTATGAG+TGG | - | chr2.1:41393584-41393603 | MS.gene90567:intron | 40.0% |
| ! | CCCAGAAGTTTTTACAGGTA+AGG | - | chr2.1:41394492-41394511 | MS.gene90567:intron | 40.0% |
| ! | GAGAAAGAAGGGTCTTTTTG+CGG | - | chr2.1:41396138-41396157 | MS.gene90567:CDS | 40.0% |
| ! | GCATTGTTACTTGTGGCATA+TGG | - | chr2.1:41396074-41396093 | MS.gene90567:CDS | 40.0% |
| ! | TATGGGCCCACTGATTATAA+TGG | - | chr2.1:41396175-41396194 | MS.gene90567:CDS | 40.0% |
| ! | TGCTTATATTTAGGACCGGA+GGG | + | chr2.1:41393296-41393277 | None:intergenic | 40.0% |
| ! | TTGCTTATATTTAGGACCGG+AGG | + | chr2.1:41393295-41393276 | None:intergenic | 40.0% |
| !! | AGAAGCGTTTGACAAAGACA+TGG | - | chr2.1:41392609-41392628 | MS.gene90567:intron | 40.0% |
| !! | TATGAAGCTGATGATGGTGT+TGG | - | chr2.1:41391459-41391478 | MS.gene90567:CDS | 40.0% |
| !! | TTTGCTCAGACTAGTTTGCT+CGG | - | chr2.1:41393648-41393667 | MS.gene90567:intron | 40.0% |
| !!! | AGTGGTAATGGATGTCCTTT+TGG | - | chr2.1:41391729-41391748 | MS.gene90567:intron | 40.0% |
| !!! | GAACTTTTAGTTCACAAGCC+CGG | - | chr2.1:41394857-41394876 | MS.gene90567:intron | 40.0% |
| !!! | GGTATGCTTGTTTTGGGTTT+TGG | + | chr2.1:41391521-41391540 | None:intergenic | 40.0% |
| AACAGTGAGTTAATGACCGG+AGG | - | chr2.1:41393463-41393482 | MS.gene90567:intron | 45.0% | |
| ACAGTGAGTTAATGACCGGA+GGG | - | chr2.1:41393464-41393483 | MS.gene90567:intron | 45.0% | |
| ACATCCTCGCATCCCAAAAT+TGG | - | chr2.1:41395871-41395890 | MS.gene90567:CDS | 45.0% | |
| ACCATTTGCATCTGCGCATT+CGG | + | chr2.1:41394629-41394648 | None:intergenic | 45.0% | |
| ACGATTGGTGTGGTGCATTA+TGG | - | chr2.1:41393554-41393573 | MS.gene90567:intron | 45.0% | |
| AGAGTTACAGTAGTAGGCTC+AGG | - | chr2.1:41394580-41394599 | MS.gene90567:intron | 45.0% | |
| AGAGTTGCAATTGTTGGTGC+AGG | - | chr2.1:41391378-41391397 | MS.gene90567:CDS | 45.0% | |
| ATTGTTGGTGCAGGAATCAG+TGG | - | chr2.1:41391387-41391406 | MS.gene90567:CDS | 45.0% | |
| GAGACATGAAGTGTAATCCG+AGG | - | chr2.1:41396116-41396135 | MS.gene90567:CDS | 45.0% | |
| GCGGAGCTATTTGAACCATA+TGG | - | chr2.1:41396157-41396176 | MS.gene90567:CDS | 45.0% | |
| GGCAATGATAGGATATGCTG+AGG | - | chr2.1:41395892-41395911 | MS.gene90567:CDS | 45.0% | |
| GGGAACATGGCATATTACAG+TGG | - | chr2.1:41391758-41391777 | MS.gene90567:intron | 45.0% | |
| GTGATAGTAAGGTGGCCAAA+AGG | + | chr2.1:41394901-41394920 | None:intergenic | 45.0% | |
| GTGTAATCCGAGGAGAAAGA+AGG | - | chr2.1:41396126-41396145 | MS.gene90567:CDS | 45.0% | |
| TAATGCACCACACCAATCGT+TGG | + | chr2.1:41393554-41393573 | None:intergenic | 45.0% | |
| TATGACCGACGACCGTTATA+GGG | - | chr2.1:41392738-41392757 | MS.gene90567:CDS | 45.0% | |
| TTATGACCGACGACCGTTAT+AGG | - | chr2.1:41392737-41392756 | MS.gene90567:CDS | 45.0% | |
| TTATGGTCCAACGATTGGTG+TGG | - | chr2.1:41393544-41393563 | MS.gene90567:intron | 45.0% | |
| ! | AAAACTTCTGGGCCTTTTCC+AGG | + | chr2.1:41394484-41394503 | None:intergenic | 45.0% |
| ! | AAACTTCTGGGCCTTTTCCA+GGG | + | chr2.1:41394483-41394502 | None:intergenic | 45.0% |
| ! | ATGATGGTGTTGGAGGACTA+TGG | - | chr2.1:41391469-41391488 | MS.gene90567:CDS | 45.0% |
| !! | ACACTTCCTTCTTGGCCTTT+TGG | - | chr2.1:41394883-41394902 | MS.gene90567:intron | 45.0% |
| !! | ATTTGGGTTGACAATGTGGG+TGG | + | chr2.1:41394048-41394067 | None:intergenic | 45.0% |
| !!! | ATTGCCAATTTTGGGATGCG+AGG | + | chr2.1:41395878-41395897 | None:intergenic | 45.0% |
| !!! | AAGTAAAAAATTTAATTTTA+TGG | + | chr2.1:41392767-41392786 | None:intergenic | 5.0% |
| AACATTCCAGAGTTCCTCCC+TGG | - | chr2.1:41394463-41394482 | MS.gene90567:intron | 50.0% | |
| AGCAACCGAGTTCTCCCTTT+CGG | - | chr2.1:41392269-41392288 | MS.gene90567:CDS | 50.0% | |
| CATGTTCCCTTGGAGCCAAA+AGG | + | chr2.1:41391747-41391766 | None:intergenic | 50.0% | |
| GGCCACCTTACTATCACCAT+TGG | - | chr2.1:41394904-41394923 | MS.gene90567:intron | 50.0% | |
| GGTATCCCTATAACGGTCGT+CGG | + | chr2.1:41392746-41392765 | None:intergenic | 50.0% | |
| GGTGTGGTGCATTATGGCAT+TGG | - | chr2.1:41393560-41393579 | MS.gene90567:intron | 50.0% | |
| TTATCCATAGAACTGCGCGC+TGG | - | chr2.1:41394771-41394790 | MS.gene90567:intron | 50.0% | |
| ! | ATGGTGTTGGAGGACTATGG+AGG | - | chr2.1:41391472-41391491 | MS.gene90567:CDS | 50.0% |
| ! | GTCTATCAAGGTACTCCCTC+CGG | + | chr2.1:41393482-41393501 | None:intergenic | 50.0% |
| !! | CCAAGAAGGAAGTGTTCTCC+GGG | + | chr2.1:41394878-41394897 | None:intergenic | 50.0% |
| !! | GAAGCTGATGATGGTGTTGG+AGG | - | chr2.1:41391462-41391481 | MS.gene90567:CDS | 50.0% |
| !! | GCCAAGAAGGAAGTGTTCTC+CGG | + | chr2.1:41394879-41394898 | None:intergenic | 50.0% |
| !! | GGGAGGAACTCTGGAATGTT+TGG | + | chr2.1:41394463-41394482 | None:intergenic | 50.0% |
| !!! | CTTTTGGCTCCAAGGGAACA+TGG | - | chr2.1:41391745-41391764 | MS.gene90567:intron | 50.0% |
| !!! | GGATGTCCTTTTGGCTCCAA+GGG | - | chr2.1:41391738-41391757 | MS.gene90567:intron | 50.0% |
| !!! | TGGATGTCCTTTTGGCTCCA+AGG | - | chr2.1:41391737-41391756 | MS.gene90567:intron | 50.0% |
| AACCGAGTTCTCCCTTTCGG+TGG | - | chr2.1:41392272-41392291 | MS.gene90567:CDS | 55.0% | |
| AGGTGGCCAAAAGGCCAAGA+AGG | + | chr2.1:41394892-41394911 | None:intergenic | 55.0% | |
| CCAGAGTTCCTCCCTGGAAA+AGG | - | chr2.1:41394469-41394488 | MS.gene90567:intron | 55.0% | |
| CCCGGAGAACACTTCCTTCT+TGG | - | chr2.1:41394875-41394894 | MS.gene90567:intron | 55.0% | |
| CTATGGGAACGCCACCGAAA+GGG | + | chr2.1:41392286-41392305 | None:intergenic | 55.0% | |
| GAAACCAGCGCGCAGTTCTA+TGG | + | chr2.1:41394778-41394797 | None:intergenic | 55.0% | |
| GCCGAATGCGCAGATGCAAA+TGG | - | chr2.1:41394625-41394644 | MS.gene90567:intron | 55.0% | |
| ! | CCTTTTCCAGGGAGGAACTC+TGG | + | chr2.1:41394472-41394491 | None:intergenic | 55.0% |
| ! | TGGGTTGACAATGTGGGTGG+TGG | + | chr2.1:41394045-41394064 | None:intergenic | 55.0% |
| CCTATGGGAACGCCACCGAA+AGG | + | chr2.1:41392287-41392306 | None:intergenic | 60.0% | |
| CCTTTCGGTGGCGTTCCCAT+AGG | - | chr2.1:41392284-41392303 | MS.gene90567:CDS | 60.0% | |
| CGCCACCGAAAGGGAGAACT+CGG | + | chr2.1:41392277-41392296 | None:intergenic | 60.0% | |
| ! | CTTCTGGGCCTTTTCCAGGG+AGG | + | chr2.1:41394480-41394499 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 41391369 | 41396213 | 41391369 | ID=MS.gene90567 |
| chr2.1 | mRNA | 41391369 | 41396213 | 41391369 | ID=MS.gene90567.t1;Parent=MS.gene90567 |
| chr2.1 | exon | 41395776 | 41396213 | 41395776 | ID=MS.gene90567.t1.exon1;Parent=MS.gene90567.t1 |
| chr2.1 | CDS | 41395776 | 41396213 | 41395776 | ID=cds.MS.gene90567.t1;Parent=MS.gene90567.t1 |
| chr2.1 | exon | 41392936 | 41393173 | 41392936 | ID=MS.gene90567.t1.exon2;Parent=MS.gene90567.t1 |
| chr2.1 | CDS | 41392936 | 41393173 | 41392936 | ID=cds.MS.gene90567.t1;Parent=MS.gene90567.t1 |
| chr2.1 | exon | 41392657 | 41392832 | 41392657 | ID=MS.gene90567.t1.exon3;Parent=MS.gene90567.t1 |
| chr2.1 | CDS | 41392657 | 41392832 | 41392657 | ID=cds.MS.gene90567.t1;Parent=MS.gene90567.t1 |
| chr2.1 | exon | 41392192 | 41392541 | 41392192 | ID=MS.gene90567.t1.exon4;Parent=MS.gene90567.t1 |
| chr2.1 | CDS | 41392192 | 41392541 | 41392192 | ID=cds.MS.gene90567.t1;Parent=MS.gene90567.t1 |
| chr2.1 | exon | 41391369 | 41391720 | 41391369 | ID=MS.gene90567.t1.exon5;Parent=MS.gene90567.t1 |
| chr2.1 | CDS | 41391369 | 41391720 | 41391369 | ID=cds.MS.gene90567.t1;Parent=MS.gene90567.t1 |
| Gene Sequence |
| Protein sequence |
