Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055533.t1 | XP_013461663.1 | 94 | 331 | 14 | 3 | 1 | 326 | 1 | 330 | 3.80E-138 | 501.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055533.t1 | Q93W88 | 51.6 | 188 | 62 | 2 | 138 | 325 | 127 | 285 | 8.3e-41 | 169.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055533.t1 | A0A072V2W2 | 94.0 | 331 | 14 | 3 | 1 | 326 | 1 | 330 | 2.7e-138 | 501.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene055533.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050464 | MS.gene055533 | 0.802894 | 4.52E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene055533 | 0.810104 | 1.36E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene055533 | 0.803795 | 2.94E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene055533 | 0.825647 | 4.18E-54 | -1.69E-46 |
| MS.gene055533 | MS.gene056330 | -0.801128 | 1.04E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene056612 | 0.814116 | 1.81E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene057146 | 0.814684 | 1.36E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene057927 | 0.800601 | 1.34E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene058660 | 0.822772 | 1.98E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene059597 | 0.804452 | 2.15E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene061041 | 0.819878 | 9.21E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene061049 | 0.816111 | 6.54E-52 | -1.69E-46 |
| MS.gene055533 | MS.gene061659 | 0.840623 | 7.78E-58 | -1.69E-46 |
| MS.gene055533 | MS.gene061679 | 0.820466 | 6.76E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene061788 | 0.811594 | 6.48E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene06255 | 0.981223 | 4.54E-152 | -1.69E-46 |
| MS.gene055533 | MS.gene062942 | 0.80867 | 2.76E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene06407 | 0.810615 | 1.06E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene065137 | 0.825862 | 3.72E-54 | -1.69E-46 |
| MS.gene055533 | MS.gene065138 | 0.828484 | 8.76E-55 | -1.69E-46 |
| MS.gene055533 | MS.gene066053 | 0.827751 | 1.32E-54 | -1.69E-46 |
| MS.gene055533 | MS.gene066937 | -0.81432 | 1.64E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene06973 | 0.802813 | 4.69E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene070491 | 0.810847 | 9.40E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene07114 | 0.804594 | 2.00E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene071294 | 0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene055533 | MS.gene071613 | 0.811673 | 6.22E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene072888 | 0.807136 | 5.86E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene07619 | 0.813218 | 2.86E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene07625 | 0.811255 | 7.67E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene07904 | 0.832993 | 6.88E-56 | -1.69E-46 |
| MS.gene055533 | MS.gene08571 | -0.807342 | 5.30E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene08664 | 0.823087 | 1.67E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene08665 | 0.812952 | 3.27E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene20275 | 0.802023 | 6.83E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene20612 | 0.802085 | 6.63E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene20931 | 0.800161 | 1.64E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene22206 | 0.82171 | 3.49E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene22209 | 0.82761 | 1.42E-54 | -1.69E-46 |
| MS.gene055533 | MS.gene22222 | 0.806975 | 6.34E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene23002 | 0.806359 | 8.55E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene23368 | 0.809403 | 1.93E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene23369 | 0.808837 | 2.55E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene23923 | 0.81309 | 3.05E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene24158 | 0.811428 | 7.03E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene25139 | 0.819198 | 1.32E-52 | -1.69E-46 |
| MS.gene055533 | MS.gene27498 | 0.801144 | 1.03E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene27725 | 0.805848 | 1.10E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene28067 | 0.812579 | 3.95E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene28160 | 0.814907 | 1.21E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene29105 | 0.801093 | 1.06E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene30518 | -0.800169 | 1.63E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene30519 | -0.801932 | 7.13E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene30520 | -0.802309 | 5.96E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene32635 | 0.800557 | 1.36E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene32705 | 0.808104 | 3.65E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene32707 | 0.821902 | 3.15E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene33187 | 0.838205 | 3.30E-57 | -1.69E-46 |
| MS.gene055533 | MS.gene33855 | 0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene34191 | 0.809031 | 2.31E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene34231 | 0.802937 | 4.43E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene34272 | 0.809896 | 1.51E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene34454 | 0.802978 | 4.34E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene34456 | 0.802051 | 6.74E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene36648 | 0.814281 | 1.67E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene37910 | 0.803187 | 3.93E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene39360 | 0.803015 | 4.26E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene41435 | 0.802273 | 6.07E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene41654 | 0.960817 | 5.48E-119 | -1.69E-46 |
| MS.gene055533 | MS.gene42080 | -0.800618 | 1.32E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene42667 | 0.811102 | 8.28E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene43403 | 0.813984 | 1.94E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene46942 | 0.831536 | 1.58E-55 | -1.69E-46 |
| MS.gene055533 | MS.gene47396 | 0.802692 | 4.97E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene48278 | 0.801919 | 7.17E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene48301 | 0.80177 | 7.70E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene48355 | 0.809411 | 1.92E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene50068 | -0.802822 | 4.67E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene50731 | 0.804323 | 2.28E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene51540 | 0.815853 | 7.47E-52 | -1.69E-46 |
| MS.gene055533 | MS.gene52238 | 0.807635 | 4.59E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene53556 | 0.81095 | 8.93E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene54317 | 0.821182 | 4.63E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene55937 | 0.802679 | 5.00E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene57299 | 0.810639 | 1.04E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene58160 | 0.825055 | 5.78E-54 | -1.69E-46 |
| MS.gene055533 | MS.gene58162 | 0.815353 | 9.65E-52 | -1.69E-46 |
| MS.gene055533 | MS.gene59648 | 0.803266 | 3.78E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene59950 | 0.818223 | 2.19E-52 | -1.69E-46 |
| MS.gene055533 | MS.gene60296 | 0.851498 | 8.54E-61 | -1.69E-46 |
| MS.gene055533 | MS.gene61507 | 0.802332 | 5.90E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene61958 | 0.813015 | 3.17E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene62419 | 0.817735 | 2.83E-52 | -1.69E-46 |
| MS.gene055533 | MS.gene62420 | 0.801479 | 8.83E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene65851 | 0.811893 | 5.57E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene66260 | 0.826497 | 2.63E-54 | -1.69E-46 |
| MS.gene055533 | MS.gene66262 | 0.832584 | 8.69E-56 | -1.69E-46 |
| MS.gene055533 | MS.gene67066 | 0.813686 | 2.26E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene69489 | 0.812759 | 3.61E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene70064 | -0.801364 | 9.32E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene70304 | 0.805538 | 1.27E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene71330 | 0.831582 | 1.54E-55 | -1.69E-46 |
| MS.gene055533 | MS.gene71829 | 0.802875 | 4.56E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene72242 | 0.801249 | 9.84E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene75021 | 0.827692 | 1.36E-54 | -1.69E-46 |
| MS.gene055533 | MS.gene76306 | 0.806668 | 7.36E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene78200 | 0.803812 | 2.92E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene78431 | 0.812878 | 3.40E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene79179 | 0.8173 | 3.54E-52 | -1.69E-46 |
| MS.gene055533 | MS.gene79479 | 0.801674 | 8.05E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene79482 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene80178 | 0.818749 | 1.67E-52 | -1.69E-46 |
| MS.gene055533 | MS.gene83767 | 0.805077 | 1.59E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene84154 | 0.803787 | 2.95E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene84200 | 0.82131 | 4.32E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene85449 | 0.809768 | 1.61E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene87268 | 0.81122 | 7.81E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene87280 | 0.830493 | 2.85E-55 | -1.69E-46 |
| MS.gene055533 | MS.gene88870 | 0.800531 | 1.38E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene89652 | 0.812243 | 4.68E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene90567 | 0.803413 | 3.53E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene91325 | 0.803768 | 2.98E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene91509 | 0.810962 | 8.88E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene92773 | 0.800402 | 1.47E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene92871 | 0.808948 | 2.41E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene95123 | 0.809833 | 1.56E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene95197 | 0.800939 | 1.14E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene95570 | 0.806566 | 7.73E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene98523 | 0.81234 | 4.45E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene99819 | 0.830662 | 2.59E-55 | -1.69E-46 |
| MS.gene055533 | MS.gene99877 | 0.813764 | 2.17E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055533.t1 | MTR_3g498825 | 96.375 | 331 | 6 | 3 | 1 | 326 | 1 | 330 | 0.0 | 651 |
| MS.gene055533.t1 | MTR_8g099880 | 56.105 | 344 | 114 | 12 | 1 | 325 | 1 | 326 | 3.49e-101 | 300 |
| MS.gene055533.t1 | MTR_1g017350 | 49.708 | 171 | 69 | 4 | 82 | 238 | 181 | 348 | 5.10e-43 | 153 |
| MS.gene055533.t1 | MTR_1g017350 | 49.708 | 171 | 69 | 4 | 82 | 238 | 181 | 348 | 5.91e-43 | 153 |
| MS.gene055533.t1 | MTR_7g053410 | 48.259 | 201 | 76 | 4 | 38 | 218 | 196 | 388 | 1.90e-42 | 154 |
| MS.gene055533.t1 | MTR_3g116770 | 63.200 | 125 | 30 | 1 | 111 | 219 | 139 | 263 | 2.19e-42 | 151 |
| MS.gene055533.t1 | MTR_3g116770 | 63.200 | 125 | 30 | 1 | 111 | 219 | 139 | 263 | 2.26e-42 | 151 |
| MS.gene055533.t1 | MTR_7g053410 | 48.259 | 201 | 76 | 4 | 38 | 218 | 196 | 388 | 2.99e-42 | 153 |
| MS.gene055533.t1 | MTR_1g017350 | 50.299 | 167 | 66 | 4 | 82 | 234 | 181 | 344 | 3.17e-42 | 151 |
| MS.gene055533.t1 | MTR_1g017350 | 50.299 | 167 | 66 | 4 | 82 | 234 | 181 | 344 | 4.28e-42 | 151 |
| MS.gene055533.t1 | MTR_8g065740 | 69.091 | 110 | 31 | 1 | 113 | 219 | 268 | 377 | 4.94e-42 | 152 |
| MS.gene055533.t1 | MTR_8g012290 | 62.500 | 136 | 40 | 4 | 109 | 236 | 245 | 377 | 4.97e-42 | 152 |
| MS.gene055533.t1 | MTR_8g012290 | 62.500 | 136 | 40 | 4 | 109 | 236 | 245 | 377 | 5.60e-42 | 152 |
| MS.gene055533.t1 | MTR_5g037250 | 61.475 | 122 | 45 | 2 | 98 | 218 | 63 | 183 | 1.34e-41 | 145 |
| MS.gene055533.t1 | MTR_5g048860 | 56.738 | 141 | 49 | 2 | 91 | 219 | 297 | 437 | 1.18e-40 | 149 |
| MS.gene055533.t1 | MTR_4g070320 | 70.642 | 109 | 28 | 3 | 113 | 219 | 109 | 215 | 7.30e-40 | 143 |
| MS.gene055533.t1 | MTR_8g062240 | 86.667 | 75 | 10 | 0 | 144 | 218 | 148 | 222 | 2.51e-39 | 140 |
| MS.gene055533.t1 | MTR_1g059270 | 65.217 | 92 | 29 | 1 | 144 | 235 | 157 | 245 | 8.12e-36 | 130 |
| MS.gene055533.t1 | MTR_1g059270 | 55.652 | 115 | 42 | 2 | 144 | 252 | 157 | 268 | 9.74e-36 | 132 |
| MS.gene055533.t1 | MTR_7g092510 | 69.663 | 89 | 24 | 1 | 144 | 232 | 170 | 255 | 5.75e-35 | 130 |
| MS.gene055533.t1 | MTR_6g084120 | 50.000 | 124 | 33 | 5 | 112 | 231 | 134 | 232 | 2.28e-26 | 105 |
| MS.gene055533.t1 | MTR_4g088710 | 83.051 | 59 | 3 | 2 | 275 | 326 | 9 | 67 | 1.68e-24 | 94.7 |
| MS.gene055533.t1 | MTR_4g131160 | 41.722 | 151 | 71 | 4 | 147 | 293 | 196 | 333 | 2.46e-23 | 99.8 |
| MS.gene055533.t1 | MTR_4g131160 | 41.722 | 151 | 71 | 4 | 147 | 293 | 199 | 336 | 2.74e-23 | 99.8 |
| MS.gene055533.t1 | MTR_1g080890 | 47.619 | 105 | 54 | 1 | 136 | 240 | 182 | 285 | 1.40e-21 | 94.4 |
| MS.gene055533.t1 | MTR_4g033295 | 60.000 | 65 | 26 | 0 | 147 | 211 | 118 | 182 | 7.71e-18 | 80.5 |
| MS.gene055533.t1 | MTR_4g033295 | 58.209 | 67 | 27 | 1 | 147 | 212 | 118 | 184 | 1.28e-17 | 79.7 |
| MS.gene055533.t1 | MTR_4g065870 | 61.538 | 65 | 25 | 0 | 147 | 211 | 355 | 419 | 5.20e-17 | 81.6 |
| MS.gene055533.t1 | MTR_4g065870 | 61.290 | 62 | 24 | 0 | 147 | 208 | 355 | 416 | 2.62e-16 | 79.3 |
| MS.gene055533.t1 | MTR_1g052470 | 50.633 | 79 | 39 | 0 | 147 | 225 | 298 | 376 | 5.31e-16 | 78.6 |
| MS.gene055533.t1 | MTR_1g069155 | 40.187 | 107 | 62 | 2 | 116 | 221 | 285 | 390 | 7.19e-16 | 78.6 |
| MS.gene055533.t1 | MTR_2g098310 | 55.224 | 67 | 30 | 0 | 145 | 211 | 330 | 396 | 1.09e-15 | 77.8 |
| MS.gene055533.t1 | MTR_1g070870 | 40.909 | 132 | 72 | 2 | 110 | 236 | 78 | 208 | 1.66e-15 | 75.9 |
| MS.gene055533.t1 | MTR_2g098310 | 56.061 | 66 | 29 | 0 | 145 | 210 | 330 | 395 | 3.65e-15 | 76.3 |
| MS.gene055533.t1 | MTR_7g092540 | 49.367 | 79 | 40 | 0 | 135 | 213 | 231 | 309 | 3.76e-15 | 75.5 |
| MS.gene055533.t1 | MTR_1g070870 | 48.980 | 98 | 49 | 1 | 139 | 236 | 115 | 211 | 4.74e-15 | 74.7 |
| MS.gene055533.t1 | MTR_7g092540 | 50.000 | 76 | 38 | 0 | 135 | 210 | 231 | 306 | 6.50e-15 | 74.3 |
| MS.gene055533.t1 | MTR_1g084980 | 37.273 | 110 | 64 | 3 | 107 | 212 | 418 | 526 | 8.55e-15 | 75.5 |
| MS.gene055533.t1 | MTR_3g028520 | 53.846 | 65 | 30 | 0 | 147 | 211 | 322 | 386 | 3.57e-14 | 73.2 |
| MS.gene055533.t1 | MTR_3g027650 | 53.846 | 65 | 30 | 0 | 147 | 211 | 322 | 386 | 3.57e-14 | 73.2 |
| MS.gene055533.t1 | MTR_3g027650 | 54.839 | 62 | 28 | 0 | 147 | 208 | 322 | 383 | 1.61e-13 | 71.2 |
| MS.gene055533.t1 | MTR_7g099540 | 48.611 | 72 | 36 | 1 | 150 | 221 | 255 | 325 | 3.34e-13 | 70.5 |
| MS.gene055533.t1 | MTR_8g036235 | 49.231 | 65 | 33 | 0 | 147 | 211 | 316 | 380 | 1.86e-12 | 67.8 |
| MS.gene055533.t1 | MTR_5g017040 | 37.391 | 115 | 67 | 3 | 112 | 222 | 67 | 180 | 1.91e-12 | 67.8 |
| MS.gene055533.t1 | MTR_3g449770 | 47.945 | 73 | 36 | 2 | 149 | 221 | 311 | 381 | 3.33e-12 | 67.4 |
| MS.gene055533.t1 | MTR_1g018090 | 52.308 | 65 | 30 | 1 | 147 | 211 | 274 | 337 | 7.45e-12 | 65.9 |
| MS.gene055533.t1 | MTR_1g019240 | 39.130 | 92 | 54 | 2 | 149 | 239 | 87 | 177 | 7.62e-12 | 65.1 |
| MS.gene055533.t1 | MTR_1g116790 | 50.000 | 64 | 32 | 0 | 147 | 210 | 265 | 328 | 1.63e-11 | 64.7 |
| MS.gene055533.t1 | MTR_2g098310 | 42.857 | 98 | 48 | 3 | 145 | 235 | 330 | 426 | 3.32e-11 | 64.3 |
| MS.gene055533.t1 | MTR_3g103030 | 53.125 | 64 | 29 | 1 | 148 | 211 | 230 | 292 | 4.70e-11 | 63.2 |
| MS.gene055533.t1 | MTR_7g099540 | 44.872 | 78 | 36 | 2 | 150 | 221 | 255 | 331 | 5.60e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055533.t1 | AT5G50915 | 47.619 | 252 | 82 | 9 | 75 | 325 | 83 | 285 | 4.68e-61 | 197 |
| MS.gene055533.t1 | AT5G50915 | 47.619 | 252 | 82 | 9 | 75 | 325 | 83 | 285 | 4.68e-61 | 197 |
| MS.gene055533.t1 | AT5G50915 | 50.472 | 212 | 65 | 5 | 75 | 286 | 83 | 254 | 1.17e-58 | 190 |
| MS.gene055533.t1 | AT5G50915 | 50.472 | 212 | 65 | 5 | 75 | 286 | 83 | 254 | 1.17e-58 | 190 |
| MS.gene055533.t1 | AT1G68920 | 58.389 | 149 | 58 | 2 | 86 | 234 | 243 | 387 | 8.80e-47 | 165 |
| MS.gene055533.t1 | AT1G68920 | 58.389 | 149 | 58 | 2 | 86 | 234 | 243 | 387 | 8.80e-47 | 165 |
| MS.gene055533.t1 | AT1G68920 | 58.389 | 149 | 58 | 2 | 86 | 234 | 243 | 387 | 8.80e-47 | 165 |
| MS.gene055533.t1 | AT1G68920 | 56.209 | 153 | 54 | 2 | 92 | 234 | 237 | 386 | 4.33e-46 | 163 |
| MS.gene055533.t1 | AT1G10120 | 60.976 | 123 | 45 | 1 | 112 | 234 | 171 | 290 | 2.41e-44 | 155 |
| MS.gene055533.t1 | AT1G10120 | 60.976 | 123 | 45 | 1 | 112 | 234 | 171 | 290 | 2.41e-44 | 155 |
| MS.gene055533.t1 | AT1G59640 | 68.966 | 116 | 31 | 2 | 108 | 218 | 92 | 207 | 2.75e-44 | 152 |
| MS.gene055533.t1 | AT3G07340 | 65.079 | 126 | 43 | 1 | 93 | 218 | 205 | 329 | 4.73e-44 | 156 |
| MS.gene055533.t1 | AT3G07340 | 65.079 | 126 | 43 | 1 | 93 | 218 | 205 | 329 | 8.30e-44 | 156 |
| MS.gene055533.t1 | AT1G26260 | 52.353 | 170 | 49 | 4 | 94 | 234 | 90 | 256 | 1.06e-43 | 153 |
| MS.gene055533.t1 | AT1G26260 | 52.353 | 170 | 49 | 4 | 94 | 234 | 119 | 285 | 1.24e-43 | 154 |
| MS.gene055533.t1 | AT1G26260 | 52.353 | 170 | 49 | 4 | 94 | 234 | 141 | 307 | 2.31e-43 | 154 |
| MS.gene055533.t1 | AT1G26260 | 52.353 | 170 | 49 | 4 | 94 | 234 | 141 | 307 | 2.31e-43 | 154 |
| MS.gene055533.t1 | AT1G26260 | 52.353 | 170 | 49 | 4 | 94 | 234 | 141 | 307 | 2.31e-43 | 154 |
| MS.gene055533.t1 | AT1G26260 | 52.353 | 170 | 49 | 4 | 94 | 234 | 141 | 307 | 2.31e-43 | 154 |
| MS.gene055533.t1 | AT1G59640 | 60.140 | 143 | 51 | 3 | 82 | 218 | 65 | 207 | 2.69e-43 | 152 |
| MS.gene055533.t1 | AT5G48560 | 83.146 | 89 | 15 | 0 | 139 | 227 | 293 | 381 | 5.06e-43 | 154 |
| MS.gene055533.t1 | AT5G48560 | 83.146 | 89 | 15 | 0 | 139 | 227 | 293 | 381 | 9.80e-43 | 154 |
| MS.gene055533.t1 | AT3G23690 | 54.194 | 155 | 63 | 3 | 87 | 234 | 126 | 279 | 1.09e-41 | 149 |
| MS.gene055533.t1 | AT4G34530 | 87.179 | 78 | 10 | 0 | 142 | 219 | 167 | 244 | 9.27e-41 | 145 |
| MS.gene055533.t1 | AT5G62610 | 71.910 | 89 | 25 | 0 | 130 | 218 | 136 | 224 | 1.47e-38 | 138 |
| MS.gene055533.t1 | AT5G62610 | 71.910 | 89 | 25 | 0 | 130 | 218 | 136 | 224 | 1.47e-38 | 138 |
| MS.gene055533.t1 | AT4G36540 | 57.143 | 133 | 46 | 3 | 111 | 235 | 97 | 226 | 7.71e-38 | 137 |
| MS.gene055533.t1 | AT4G36540 | 57.143 | 133 | 46 | 3 | 111 | 235 | 97 | 226 | 8.60e-38 | 137 |
| MS.gene055533.t1 | AT2G18300 | 65.000 | 100 | 32 | 1 | 144 | 243 | 182 | 278 | 5.50e-37 | 135 |
| MS.gene055533.t1 | AT2G18300 | 81.579 | 76 | 14 | 0 | 144 | 219 | 182 | 257 | 1.32e-36 | 134 |
| MS.gene055533.t1 | AT2G42300 | 64.583 | 96 | 31 | 1 | 144 | 239 | 182 | 274 | 1.48e-36 | 132 |
| MS.gene055533.t1 | AT1G18400 | 71.264 | 87 | 24 | 1 | 145 | 231 | 143 | 228 | 2.67e-36 | 131 |
| MS.gene055533.t1 | AT2G18300 | 81.579 | 76 | 14 | 0 | 144 | 219 | 182 | 257 | 2.82e-36 | 134 |
| MS.gene055533.t1 | AT3G57800 | 71.111 | 90 | 23 | 1 | 144 | 233 | 201 | 287 | 3.00e-36 | 134 |
| MS.gene055533.t1 | AT1G18400 | 71.264 | 87 | 24 | 1 | 145 | 231 | 143 | 228 | 4.66e-36 | 131 |
| MS.gene055533.t1 | AT1G73830 | 68.478 | 92 | 28 | 1 | 146 | 237 | 146 | 236 | 1.32e-35 | 130 |
| MS.gene055533.t1 | AT2G42300 | 66.304 | 92 | 28 | 1 | 144 | 235 | 182 | 270 | 2.99e-35 | 130 |
| MS.gene055533.t1 | AT1G73830 | 70.930 | 86 | 24 | 1 | 146 | 231 | 146 | 230 | 3.04e-35 | 129 |
| MS.gene055533.t1 | AT1G25330 | 52.518 | 139 | 54 | 4 | 99 | 231 | 51 | 183 | 3.18e-33 | 122 |
| MS.gene055533.t1 | AT3G57800 | 46.043 | 139 | 25 | 2 | 144 | 235 | 201 | 336 | 1.57e-27 | 111 |
| MS.gene055533.t1 | AT2G24260 | 65.753 | 73 | 24 | 1 | 140 | 212 | 28 | 99 | 1.36e-23 | 97.8 |
| MS.gene055533.t1 | AT2G24260 | 65.753 | 73 | 24 | 1 | 140 | 212 | 131 | 202 | 1.16e-22 | 97.1 |
| MS.gene055533.t1 | AT5G58010 | 52.427 | 103 | 38 | 3 | 146 | 244 | 98 | 193 | 3.08e-22 | 95.1 |
| MS.gene055533.t1 | AT4G30980 | 71.212 | 66 | 18 | 1 | 147 | 212 | 130 | 194 | 3.95e-22 | 95.1 |
| MS.gene055533.t1 | AT4G30980 | 71.212 | 66 | 18 | 1 | 147 | 212 | 178 | 242 | 7.02e-22 | 95.1 |
| MS.gene055533.t1 | AT2G42300 | 83.721 | 43 | 7 | 0 | 144 | 186 | 182 | 224 | 1.13e-18 | 84.0 |
| MS.gene055533.t1 | AT2G42300 | 83.721 | 43 | 7 | 0 | 144 | 186 | 182 | 224 | 1.13e-18 | 84.0 |
| MS.gene055533.t1 | AT2G42300 | 83.721 | 43 | 7 | 0 | 144 | 186 | 182 | 224 | 1.25e-18 | 84.0 |
| MS.gene055533.t1 | AT1G35460 | 53.030 | 66 | 31 | 0 | 146 | 211 | 180 | 245 | 3.11e-15 | 74.7 |
| MS.gene055533.t1 | AT4G09180 | 53.731 | 67 | 31 | 0 | 145 | 211 | 182 | 248 | 3.24e-15 | 74.7 |
| MS.gene055533.t1 | AT2G42280 | 54.688 | 64 | 29 | 0 | 147 | 210 | 279 | 342 | 4.88e-15 | 75.5 |
| MS.gene055533.t1 | AT1G51140 | 57.812 | 64 | 27 | 0 | 147 | 210 | 304 | 367 | 7.66e-15 | 75.1 |
| MS.gene055533.t1 | AT2G42280 | 56.061 | 66 | 27 | 1 | 147 | 210 | 279 | 344 | 8.23e-15 | 74.7 |
| MS.gene055533.t1 | AT4G28790 | 35.200 | 125 | 73 | 2 | 98 | 222 | 229 | 345 | 1.23e-14 | 74.7 |
| MS.gene055533.t1 | AT1G09530 | 43.820 | 89 | 46 | 2 | 124 | 212 | 317 | 401 | 2.36e-14 | 73.9 |
| MS.gene055533.t1 | AT1G09530 | 43.820 | 89 | 46 | 2 | 124 | 212 | 317 | 401 | 2.36e-14 | 73.9 |
| MS.gene055533.t1 | AT1G09530 | 43.820 | 89 | 46 | 2 | 124 | 212 | 317 | 401 | 2.36e-14 | 73.9 |
| MS.gene055533.t1 | AT1G09530 | 43.820 | 89 | 46 | 2 | 124 | 212 | 317 | 401 | 2.36e-14 | 73.9 |
| MS.gene055533.t1 | AT1G09530 | 43.820 | 89 | 46 | 2 | 124 | 212 | 317 | 401 | 2.36e-14 | 73.9 |
| MS.gene055533.t1 | AT1G09530 | 43.820 | 89 | 46 | 2 | 124 | 212 | 317 | 401 | 2.36e-14 | 73.9 |
| MS.gene055533.t1 | AT4G28800 | 48.611 | 72 | 36 | 1 | 150 | 221 | 252 | 322 | 4.72e-14 | 73.2 |
| MS.gene055533.t1 | AT4G02590 | 40.310 | 129 | 63 | 4 | 109 | 224 | 99 | 226 | 6.19e-14 | 71.6 |
| MS.gene055533.t1 | AT4G02590 | 40.310 | 129 | 63 | 4 | 109 | 224 | 99 | 226 | 6.19e-14 | 71.6 |
| MS.gene055533.t1 | AT4G02590 | 40.310 | 129 | 63 | 4 | 109 | 224 | 36 | 163 | 6.26e-14 | 70.9 |
| MS.gene055533.t1 | AT2G20180 | 52.381 | 63 | 29 | 1 | 150 | 212 | 210 | 271 | 7.04e-14 | 72.4 |
| MS.gene055533.t1 | AT2G20180 | 52.381 | 63 | 29 | 1 | 150 | 212 | 210 | 271 | 7.04e-14 | 72.4 |
| MS.gene055533.t1 | AT2G20180 | 52.381 | 63 | 29 | 1 | 150 | 212 | 210 | 271 | 7.04e-14 | 72.4 |
| MS.gene055533.t1 | AT2G20180 | 52.381 | 63 | 29 | 1 | 150 | 212 | 281 | 342 | 7.97e-14 | 72.4 |
| MS.gene055533.t1 | AT2G20180 | 52.381 | 63 | 29 | 1 | 150 | 212 | 281 | 342 | 7.97e-14 | 72.4 |
| MS.gene055533.t1 | AT2G20180 | 52.381 | 63 | 29 | 1 | 150 | 212 | 281 | 342 | 7.97e-14 | 72.4 |
| MS.gene055533.t1 | AT2G20180 | 52.381 | 63 | 29 | 1 | 150 | 212 | 281 | 342 | 7.97e-14 | 72.4 |
| MS.gene055533.t1 | AT4G28815 | 50.000 | 70 | 33 | 2 | 150 | 218 | 71 | 139 | 9.29e-14 | 70.1 |
| MS.gene055533.t1 | AT4G28815 | 56.897 | 58 | 24 | 1 | 150 | 207 | 147 | 203 | 3.22e-13 | 69.7 |
| MS.gene055533.t1 | AT1G03040 | 53.659 | 82 | 33 | 2 | 147 | 224 | 139 | 219 | 3.71e-13 | 69.3 |
| MS.gene055533.t1 | AT1G03040 | 53.659 | 82 | 33 | 2 | 147 | 224 | 144 | 224 | 4.22e-13 | 69.3 |
| MS.gene055533.t1 | AT1G03040 | 53.659 | 82 | 33 | 2 | 147 | 224 | 144 | 224 | 6.88e-13 | 68.9 |
| MS.gene055533.t1 | AT2G43140 | 53.125 | 64 | 30 | 0 | 147 | 210 | 134 | 197 | 7.74e-13 | 67.0 |
| MS.gene055533.t1 | AT2G43140 | 53.125 | 64 | 30 | 0 | 147 | 210 | 231 | 294 | 7.78e-13 | 68.6 |
| MS.gene055533.t1 | AT4G28800 | 52.459 | 61 | 28 | 1 | 150 | 210 | 264 | 323 | 1.60e-12 | 68.6 |
| MS.gene055533.t1 | AT2G20180 | 51.667 | 60 | 28 | 1 | 150 | 209 | 281 | 339 | 2.12e-12 | 67.4 |
| MS.gene055533.t1 | AT1G27740 | 35.714 | 126 | 68 | 2 | 86 | 211 | 118 | 230 | 2.73e-12 | 66.2 |
| MS.gene055533.t1 | AT4G00050 | 49.275 | 69 | 34 | 1 | 143 | 211 | 101 | 168 | 1.17e-11 | 65.1 |
| MS.gene055533.t1 | AT4G00050 | 49.275 | 69 | 34 | 1 | 143 | 211 | 203 | 270 | 2.01e-11 | 64.7 |
| MS.gene055533.t1 | AT4G00050 | 49.275 | 69 | 34 | 1 | 143 | 211 | 203 | 270 | 2.48e-11 | 64.7 |
| MS.gene055533.t1 | AT1G05805 | 48.438 | 64 | 33 | 0 | 147 | 210 | 283 | 346 | 2.61e-11 | 64.3 |
| MS.gene055533.t1 | AT4G28790 | 33.333 | 117 | 70 | 2 | 98 | 214 | 229 | 337 | 4.23e-11 | 63.5 |
| MS.gene055533.t1 | AT2G14760 | 45.349 | 86 | 42 | 3 | 147 | 228 | 237 | 321 | 5.61e-11 | 63.2 |
Find 64 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAGGGTTAGTATTGTTTC+TGG | 0.191984 | 3.2:-82149779 | None:intergenic |
| TCCACAGTCTTCCATGGTTC+TGG | 0.296713 | 3.2:+82149690 | MS.gene055533:CDS |
| GCAAAAGTTGTGCCTTGTTT+AGG | 0.309108 | 3.2:-82151267 | None:intergenic |
| CTCAGTTATGGTAGTAACTT+TGG | 0.320242 | 3.2:-82149635 | None:intergenic |
| AGCTGCTAATGACTACCTTT+TGG | 0.330118 | 3.2:+82151326 | MS.gene055533:CDS |
| ATGGATTGTAACCAGGTAAC+TGG | 0.332974 | 3.2:+82150850 | MS.gene055533:intron |
| AAAAGATCAGAGAAAGTGTT+TGG | 0.372452 | 3.2:+82150190 | MS.gene055533:CDS |
| GGACGTGGATATAGCCAGTT+GGG | 0.373564 | 3.2:-82150220 | None:intergenic |
| AACTGTGAAGGTGGAGGAGG+AGG | 0.387298 | 3.2:-82149565 | None:intergenic |
| AACAGACCTAGACACTCTTT+TGG | 0.397586 | 3.2:+82151081 | MS.gene055533:CDS |
| GTTCTGGACAAGCTTGAAAA+TGG | 0.416319 | 3.2:+82149706 | MS.gene055533:CDS |
| TGAAACTGTGAAGGTGGAGG+AGG | 0.419275 | 3.2:-82149568 | None:intergenic |
| AGAAGGTTCATTCTCAGTTA+TGG | 0.434337 | 3.2:-82149647 | None:intergenic |
| TTATCAGAAATTAAATAACT+TGG | 0.449559 | 3.2:+82151203 | MS.gene055533:intron |
| TGGCCTGACCCCTTCTTGCT+CGG | 0.454614 | 3.2:-82150241 | None:intergenic |
| GTTCTCCTCTTCTTCTCCGC+AGG | 0.455361 | 3.2:-82149757 | None:intergenic |
| TAGCCACAGCCTTGCTGAAA+GGG | 0.456249 | 3.2:+82150268 | MS.gene055533:CDS |
| GACCCCTTCTTGCTCGGACG+TGG | 0.465774 | 3.2:-82150235 | None:intergenic |
| CGTCCGAGCAAGAAGGGGTC+AGG | 0.472206 | 3.2:+82150238 | MS.gene055533:CDS |
| GAAGATGTTGGTTGGAGTCA+TGG | 0.483883 | 3.2:-82151301 | None:intergenic |
| CAAAAGTTTCTTCATTCACA+TGG | 0.485926 | 3.2:+82151520 | MS.gene055533:CDS |
| GAAGAGAGAAAATAAGTGAA+AGG | 0.496748 | 3.2:+82150663 | MS.gene055533:CDS |
| GACACAGATGATAATGTTGA+TGG | 0.508396 | 3.2:-82151231 | None:intergenic |
| ATTAGCAGCTTGGAAGATGT+TGG | 0.513901 | 3.2:-82151313 | None:intergenic |
| AATATTATTACATGAGAGTG+AGG | 0.517794 | 3.2:-82149796 | None:intergenic |
| TGACAGGATAATGCAGCAGA+AGG | 0.520312 | 3.2:+82150113 | MS.gene055533:intron |
| AAGTTGCAGCAACTTGTGCC+AGG | 0.526665 | 3.2:+82150692 | MS.gene055533:CDS |
| GGGTGAAACTGTGAAGGTGG+AGG | 0.526667 | 3.2:-82149571 | None:intergenic |
| ATAGCCACAGCCTTGCTGAA+AGG | 0.530497 | 3.2:+82150267 | MS.gene055533:CDS |
| ATAGTCCTGCGGAGAAGAAG+AGG | 0.530539 | 3.2:+82149752 | MS.gene055533:CDS |
| ACTTGTGCCAGGCTGTGATA+AGG | 0.531492 | 3.2:+82150703 | MS.gene055533:CDS |
| AAAGGTAGTCATTAGCAGCT+TGG | 0.531755 | 3.2:-82151323 | None:intergenic |
| CCATGGAAGACTGTGGACTA+AGG | 0.533292 | 3.2:-82149684 | None:intergenic |
| CCTTAGTCCACAGTCTTCCA+TGG | 0.535388 | 3.2:+82149684 | MS.gene055533:CDS |
| GCAGCTTGGAAGATGTTGGT+TGG | 0.538644 | 3.2:-82151309 | None:intergenic |
| TTAATAATATCTTGATGAAG+AGG | 0.545994 | 3.2:-82149592 | None:intergenic |
| AGCAAGGCTGTGGCTATCAG+TGG | 0.554257 | 3.2:-82150261 | None:intergenic |
| TATCCACGTCCGAGCAAGAA+GGG | 0.556525 | 3.2:+82150232 | MS.gene055533:CDS |
| TTGAAGCTGAAGTATCCAAA+AGG | 0.556829 | 3.2:-82151341 | None:intergenic |
| CGGACGTGGATATAGCCAGT+TGG | 0.559837 | 3.2:-82150221 | None:intergenic |
| AATGATGAGTCAACAAGGAA+AGG | 0.563177 | 3.2:-82149517 | None:intergenic |
| ATGAGTCAACAAGGAAAGGA+TGG | 0.563812 | 3.2:-82149513 | None:intergenic |
| ATACCCTTTCAGCAAGGCTG+TGG | 0.565788 | 3.2:-82150271 | None:intergenic |
| TGACCTACCTTATCACAGCC+TGG | 0.577941 | 3.2:-82150710 | None:intergenic |
| GTCTAACCAAAAGAGTGTCT+AGG | 0.588703 | 3.2:-82151087 | None:intergenic |
| TTCAAGCTTGTCCAGAACCA+TGG | 0.592122 | 3.2:-82149701 | None:intergenic |
| GTTGCCATGTCATAGAACAT+AGG | 0.595363 | 3.2:-82151061 | None:intergenic |
| ATATCCACGTCCGAGCAAGA+AGG | 0.602822 | 3.2:+82150231 | MS.gene055533:CDS |
| AGAGGGTGAAACTGTGAAGG+TGG | 0.604355 | 3.2:-82149574 | None:intergenic |
| GTCTTTACAGAATCAAGTAG+AGG | 0.604540 | 3.2:+82150912 | MS.gene055533:CDS |
| GTCATCAAATGTTGTCTCTG+AGG | 0.606377 | 3.2:+82151383 | MS.gene055533:CDS |
| TTGTAACCAGGTAACTGGAA+AGG | 0.609989 | 3.2:+82150855 | MS.gene055533:intron |
| ATATTATTACATGAGAGTGA+GGG | 0.611838 | 3.2:-82149795 | None:intergenic |
| TAATAATATCTTGATGAAGA+GGG | 0.621927 | 3.2:-82149591 | None:intergenic |
| GACGTGGATATAGCCAGTTG+GGG | 0.624086 | 3.2:-82150219 | None:intergenic |
| GACAGGATAATGCAGCAGAA+GGG | 0.624145 | 3.2:+82150114 | MS.gene055533:intron |
| ATCCACGTCCGAGCAAGAAG+GGG | 0.635705 | 3.2:+82150233 | MS.gene055533:CDS |
| TCCAGAACCATGGAAGACTG+TGG | 0.648687 | 3.2:-82149691 | None:intergenic |
| GCATGAATGATGAGTCAACA+AGG | 0.650211 | 3.2:-82149522 | None:intergenic |
| CATTGCAATAGTCCTAAACA+AGG | 0.657273 | 3.2:+82151255 | MS.gene055533:CDS |
| TGAAGAGGGTGAAACTGTGA+AGG | 0.663457 | 3.2:-82149577 | None:intergenic |
| GAATCCTATGTTCTATGACA+TGG | 0.666100 | 3.2:+82151057 | MS.gene055533:CDS |
| GGGAGTATACCCTTTCAGCA+AGG | 0.671165 | 3.2:-82150277 | None:intergenic |
| ACGTGGATATAGCCAGTTGG+GGG | 0.714907 | 3.2:-82150218 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGATTTAATCCTAAAA+TGG | + | chr3.2:82151428-82151447 | MS.gene055533:intron | 15.0% |
| !! | AAAGTGAAATATATTGTATT+GGG | + | chr3.2:82150368-82150387 | MS.gene055533:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr3.2:82150409-82150428 | MS.gene055533:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr3.2:82150408-82150427 | MS.gene055533:intron | 15.0% |
| !! | TTATCAGAAATTAAATAACT+TGG | + | chr3.2:82151203-82151222 | MS.gene055533:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | chr3.2:82150344-82150363 | MS.gene055533:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | chr3.2:82150343-82150362 | MS.gene055533:intron | 15.0% |
| !!! | TTAGGATTAAATCATTTTTT+TGG | - | chr3.2:82151426-82151445 | None:intergenic | 15.0% |
| !! | AAATTGGATGAATTATATTC+AGG | + | chr3.2:82150637-82150656 | MS.gene055533:intron | 20.0% |
| !! | GAAAGTGAAATATATTGTAT+TGG | + | chr3.2:82150367-82150386 | MS.gene055533:intron | 20.0% |
| !! | TAATAATATCTTGATGAAGA+GGG | - | chr3.2:82149594-82149613 | None:intergenic | 20.0% |
| !! | TGTTAGTAATTAAATATGAC+AGG | + | chr3.2:82150097-82150116 | MS.gene055533:intron | 20.0% |
| !! | TGTTGCAAATTGAATTAAAT+TGG | + | chr3.2:82150621-82150640 | MS.gene055533:intron | 20.0% |
| !! | TTAATAATATCTTGATGAAG+AGG | - | chr3.2:82149595-82149614 | None:intergenic | 20.0% |
| !!! | AAAAAATAACATTTTCAGGA+TGG | + | chr3.2:82151478-82151497 | MS.gene055533:intron | 20.0% |
| !!! | AAACTTGTGGATAATTTTTT+TGG | + | chr3.2:82149958-82149977 | MS.gene055533:intron | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | + | chr3.2:82150345-82150364 | MS.gene055533:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | + | chr3.2:82150478-82150497 | MS.gene055533:intron | 20.0% |
| !!! | TGACAAAAAATAACATTTTC+AGG | + | chr3.2:82151474-82151493 | MS.gene055533:intron | 20.0% |
| !!! | TTAGCACTTTTTTTATACTA+TGG | + | chr3.2:82149991-82150010 | MS.gene055533:intron | 20.0% |
| ! | AATATTATTACATGAGAGTG+AGG | - | chr3.2:82149799-82149818 | None:intergenic | 25.0% |
| ! | AGACATGAAGATAACTAAAA+GGG | - | chr3.2:82150592-82150611 | None:intergenic | 25.0% |
| ! | ATATTATTACATGAGAGTGA+GGG | - | chr3.2:82149798-82149817 | None:intergenic | 25.0% |
| ! | TAATCAACTCAATTCATAAC+AGG | - | chr3.2:82150063-82150082 | None:intergenic | 25.0% |
| ! | TATATGATGATTCACATGTT+AGG | + | chr3.2:82151136-82151155 | MS.gene055533:intron | 25.0% |
| !! | ACTAGTATTTTCATTTCATG+TGG | + | chr3.2:82150534-82150553 | MS.gene055533:intron | 25.0% |
| !! | AGAATACTTACATCCATTTT+AGG | - | chr3.2:82151444-82151463 | None:intergenic | 25.0% |
| !! | ATAACTAAAAGGGACATTTT+TGG | - | chr3.2:82150582-82150601 | None:intergenic | 25.0% |
| !! | ATTATTTATGGATTGTAACC+AGG | + | chr3.2:82150843-82150862 | MS.gene055533:intron | 25.0% |
| !! | CCACAAGTTTTCTTAAAATA+AGG | - | chr3.2:82149948-82149967 | None:intergenic | 25.0% |
| !! | CTAGTATTTTCATTTCATGT+GGG | + | chr3.2:82150535-82150554 | MS.gene055533:intron | 25.0% |
| !! | TAGTATTTTCATTTCATGTG+GGG | + | chr3.2:82150536-82150555 | MS.gene055533:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | chr3.2:82150455-82150474 | MS.gene055533:intron | 25.0% |
| !!! | CCTTATTTTAAGAAAACTTG+TGG | + | chr3.2:82149945-82149964 | MS.gene055533:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr3.2:82150456-82150475 | MS.gene055533:intron | 25.0% |
| !!! | TTTGAGACTTTTAATTGCAT+GGG | - | chr3.2:82150765-82150784 | None:intergenic | 25.0% |
| !!! | TTTTGAGACTTTTAATTGCA+TGG | - | chr3.2:82150766-82150785 | None:intergenic | 25.0% |
| AGAAAATAGGTCAGTTATTC+CGG | + | chr3.2:82150491-82150510 | MS.gene055533:intron | 30.0% | |
| ATCTCTAATTCTTCTGTCAT+AGG | - | chr3.2:82149911-82149930 | None:intergenic | 30.0% | |
| CAAAAGTTTCTTCATTCACA+TGG | + | chr3.2:82151520-82151539 | MS.gene055533:CDS | 30.0% | |
| GAAAAACAAAGAAGATGAGA+AGG | + | chr3.2:82150154-82150173 | MS.gene055533:CDS | 30.0% | |
| GAAGAGAGAAAATAAGTGAA+AGG | + | chr3.2:82150663-82150682 | MS.gene055533:CDS | 30.0% | |
| GAGACATGAAGATAACTAAA+AGG | - | chr3.2:82150593-82150612 | None:intergenic | 30.0% | |
| TCTAGCAGTGATATATATGA+TGG | - | chr3.2:82149842-82149861 | None:intergenic | 30.0% | |
| TTGGAATTGTATCATACAAG+TGG | - | chr3.2:82150563-82150582 | None:intergenic | 30.0% | |
| ! | AGTGATATATATGATGGAGA+TGG | - | chr3.2:82149836-82149855 | None:intergenic | 30.0% |
| ! | CAGCTTCAATTTTTCTACAA+GGG | + | chr3.2:82151355-82151374 | MS.gene055533:CDS | 30.0% |
| ! | TCAGCTTCAATTTTTCTACA+AGG | + | chr3.2:82151354-82151373 | MS.gene055533:CDS | 30.0% |
| !! | AAAAGATCAGAGAAAGTGTT+TGG | + | chr3.2:82150190-82150209 | MS.gene055533:CDS | 30.0% |
| !! | AATATTCTCAAGCTGTTTTG+TGG | + | chr3.2:82150942-82150961 | MS.gene055533:intron | 30.0% |
| AATGATGAGTCAACAAGGAA+AGG | - | chr3.2:82149520-82149539 | None:intergenic | 35.0% | |
| AGAAGGTTCATTCTCAGTTA+TGG | - | chr3.2:82149650-82149669 | None:intergenic | 35.0% | |
| CAAAGTAGGTCAATTAAACC+GGG | - | chr3.2:82150308-82150327 | None:intergenic | 35.0% | |
| CATTGCAATAGTCCTAAACA+AGG | + | chr3.2:82151255-82151274 | MS.gene055533:CDS | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | - | chr3.2:82150309-82150328 | None:intergenic | 35.0% | |
| CTCAGTTATGGTAGTAACTT+TGG | - | chr3.2:82149638-82149657 | None:intergenic | 35.0% | |
| GAAAATAGGTCAGTTATTCC+GGG | + | chr3.2:82150492-82150511 | MS.gene055533:intron | 35.0% | |
| GAATCCTATGTTCTATGACA+TGG | + | chr3.2:82151057-82151076 | MS.gene055533:CDS | 35.0% | |
| GTCTTTACAGAATCAAGTAG+AGG | + | chr3.2:82150912-82150931 | MS.gene055533:CDS | 35.0% | |
| TACTCAGAAAAATAGTCCTG+CGG | + | chr3.2:82149741-82149760 | MS.gene055533:CDS | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | chr3.2:82150322-82150341 | None:intergenic | 35.0% | |
| ! | CAATTTTTCTACAAGGGCAA+AGG | + | chr3.2:82151361-82151380 | MS.gene055533:CDS | 35.0% |
| ! | GACACAGATGATAATGTTGA+TGG | - | chr3.2:82151234-82151253 | None:intergenic | 35.0% |
| ! | TTGAAGCTGAAGTATCCAAA+AGG | - | chr3.2:82151344-82151363 | None:intergenic | 35.0% |
| !! | TTCAGGATGGTAGTCATTTT+TGG | + | chr3.2:82151491-82151510 | MS.gene055533:intron | 35.0% |
| !!! | AGGTTTTTGGTGAAAGAAGA+AGG | - | chr3.2:82149667-82149686 | None:intergenic | 35.0% |
| !!! | TCAGGATGGTAGTCATTTTT+GGG | + | chr3.2:82151492-82151511 | MS.gene055533:intron | 35.0% |
| AAAGGTAGTCATTAGCAGCT+TGG | - | chr3.2:82151326-82151345 | None:intergenic | 40.0% | |
| ACCTTCATGACAGCACATAT+AGG | + | chr3.2:82150739-82150758 | MS.gene055533:intron | 40.0% | |
| ATGAGTCAACAAGGAAAGGA+TGG | - | chr3.2:82149516-82149535 | None:intergenic | 40.0% | |
| ATTAGCAGCTTGGAAGATGT+TGG | - | chr3.2:82151316-82151335 | None:intergenic | 40.0% | |
| CCGGTTTAATTGACCTACTT+TGG | + | chr3.2:82150306-82150325 | MS.gene055533:intron | 40.0% | |
| GCATGAATGATGAGTCAACA+AGG | - | chr3.2:82149525-82149544 | None:intergenic | 40.0% | |
| GTCATCAAATGTTGTCTCTG+AGG | + | chr3.2:82151383-82151402 | MS.gene055533:CDS | 40.0% | |
| GTTGCCATGTCATAGAACAT+AGG | - | chr3.2:82151064-82151083 | None:intergenic | 40.0% | |
| TTGTAACCAGGTAACTGGAA+AGG | + | chr3.2:82150855-82150874 | MS.gene055533:intron | 40.0% | |
| ! | AACAGACCTAGACACTCTTT+TGG | + | chr3.2:82151081-82151100 | MS.gene055533:CDS | 40.0% |
| ! | AGCTGCTAATGACTACCTTT+TGG | + | chr3.2:82151326-82151345 | MS.gene055533:CDS | 40.0% |
| ! | ATGGATTGTAACCAGGTAAC+TGG | + | chr3.2:82150850-82150869 | MS.gene055533:intron | 40.0% |
| ! | GTGAGGGTTAGTATTGTTTC+TGG | - | chr3.2:82149782-82149801 | None:intergenic | 40.0% |
| ! | GTTCTGGACAAGCTTGAAAA+TGG | + | chr3.2:82149706-82149725 | MS.gene055533:CDS | 40.0% |
| !! | AGACTGTGGACTAAGGTTTT+TGG | - | chr3.2:82149680-82149699 | None:intergenic | 40.0% |
| !! | CACTCTTTTGGTTAGACAAG+AGG | + | chr3.2:82151093-82151112 | MS.gene055533:CDS | 40.0% |
| !! | GCAAAAGTTGTGCCTTGTTT+AGG | - | chr3.2:82151270-82151289 | None:intergenic | 40.0% |
| !! | GTCTAACCAAAAGAGTGTCT+AGG | - | chr3.2:82151090-82151109 | None:intergenic | 40.0% |
| !!! | GATGGTAGTCATTTTTGGGA+GGG | + | chr3.2:82151496-82151515 | MS.gene055533:CDS | 40.0% |
| ATAGGTCAGTTATTCCGGGA+CGG | + | chr3.2:82150496-82150515 | MS.gene055533:intron | 45.0% | |
| GACAGGATAATGCAGCAGAA+GGG | + | chr3.2:82150114-82150133 | MS.gene055533:intron | 45.0% | |
| GCCTATATGTGCTGTCATGA+AGG | - | chr3.2:82150743-82150762 | None:intergenic | 45.0% | |
| GTAGGTCAATTAAACCGGGA+CGG | - | chr3.2:82150304-82150323 | None:intergenic | 45.0% | |
| TAAGAGCCTTTCCAGTTACC+TGG | - | chr3.2:82150864-82150883 | None:intergenic | 45.0% | |
| TGAAGAGGGTGAAACTGTGA+AGG | - | chr3.2:82149580-82149599 | None:intergenic | 45.0% | |
| TGACAGGATAATGCAGCAGA+AGG | + | chr3.2:82150113-82150132 | MS.gene055533:intron | 45.0% | |
| TTCAAGCTTGTCCAGAACCA+TGG | - | chr3.2:82149704-82149723 | None:intergenic | 45.0% | |
| ! | GAAGATGTTGGTTGGAGTCA+TGG | - | chr3.2:82151304-82151323 | None:intergenic | 45.0% |
| !!! | GGATGGTAGTCATTTTTGGG+AGG | + | chr3.2:82151495-82151514 | MS.gene055533:intron | 45.0% |
| !! | TCATAAAATATAATTATTTA+TGG | + | chr3.2:82150831-82150850 | MS.gene055533:intron | 5.0% |
| AAGTTGCAGCAACTTGTGCC+AGG | + | chr3.2:82150692-82150711 | MS.gene055533:CDS | 50.0% | |
| ACGTGGATATAGCCAGTTGG+GGG | - | chr3.2:82150221-82150240 | None:intergenic | 50.0% | |
| ACTTGTGCCAGGCTGTGATA+AGG | + | chr3.2:82150703-82150722 | MS.gene055533:CDS | 50.0% | |
| AGAGGGTGAAACTGTGAAGG+TGG | - | chr3.2:82149577-82149596 | None:intergenic | 50.0% | |
| ATACCCTTTCAGCAAGGCTG+TGG | - | chr3.2:82150274-82150293 | None:intergenic | 50.0% | |
| ATAGCCACAGCCTTGCTGAA+AGG | + | chr3.2:82150267-82150286 | MS.gene055533:CDS | 50.0% | |
| ATAGTCCTGCGGAGAAGAAG+AGG | + | chr3.2:82149752-82149771 | MS.gene055533:CDS | 50.0% | |
| ATATCCACGTCCGAGCAAGA+AGG | + | chr3.2:82150231-82150250 | MS.gene055533:CDS | 50.0% | |
| CATGTGTGTGTGTGTGTGCA+TGG | - | chr3.2:82150031-82150050 | None:intergenic | 50.0% | |
| CCTTAGTCCACAGTCTTCCA+TGG | + | chr3.2:82149684-82149703 | MS.gene055533:CDS | 50.0% | |
| GACGTGGATATAGCCAGTTG+GGG | - | chr3.2:82150222-82150241 | None:intergenic | 50.0% | |
| GCAGCTTGGAAGATGTTGGT+TGG | - | chr3.2:82151312-82151331 | None:intergenic | 50.0% | |
| GGACGTGGATATAGCCAGTT+GGG | - | chr3.2:82150223-82150242 | None:intergenic | 50.0% | |
| GTCAATTAAACCGGGACGGA+GGG | - | chr3.2:82150300-82150319 | None:intergenic | 50.0% | |
| TAGCCACAGCCTTGCTGAAA+GGG | + | chr3.2:82150268-82150287 | MS.gene055533:CDS | 50.0% | |
| TATCCACGTCCGAGCAAGAA+GGG | + | chr3.2:82150232-82150251 | MS.gene055533:CDS | 50.0% | |
| TCCACAGTCTTCCATGGTTC+TGG | + | chr3.2:82149690-82149709 | MS.gene055533:CDS | 50.0% | |
| TCCAGAACCATGGAAGACTG+TGG | - | chr3.2:82149694-82149713 | None:intergenic | 50.0% | |
| TGAAACTGTGAAGGTGGAGG+AGG | - | chr3.2:82149571-82149590 | None:intergenic | 50.0% | |
| TGACCTACCTTATCACAGCC+TGG | - | chr3.2:82150713-82150732 | None:intergenic | 50.0% | |
| ! | CCATGGAAGACTGTGGACTA+AGG | - | chr3.2:82149687-82149706 | None:intergenic | 50.0% |
| ! | GGGAGTATACCCTTTCAGCA+AGG | - | chr3.2:82150280-82150299 | None:intergenic | 50.0% |
| AACTGTGAAGGTGGAGGAGG+AGG | - | chr3.2:82149568-82149587 | None:intergenic | 55.0% | |
| AGCAAGGCTGTGGCTATCAG+TGG | - | chr3.2:82150264-82150283 | None:intergenic | 55.0% | |
| ATCCACGTCCGAGCAAGAAG+GGG | + | chr3.2:82150233-82150252 | MS.gene055533:CDS | 55.0% | |
| ATGTACTACTCCCTCCGTCC+CGG | - | chr3.2:82150513-82150532 | None:intergenic | 55.0% | |
| CGGACGTGGATATAGCCAGT+TGG | - | chr3.2:82150224-82150243 | None:intergenic | 55.0% | |
| GGGTGAAACTGTGAAGGTGG+AGG | - | chr3.2:82149574-82149593 | None:intergenic | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | - | chr3.2:82150301-82150320 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr3.2:82150500-82150519 | MS.gene055533:intron | 55.0% | |
| GTGCCAGGCTGTGATAAGGT+AGG | + | chr3.2:82150707-82150726 | MS.gene055533:intron | 55.0% | |
| GTTCTCCTCTTCTTCTCCGC+AGG | - | chr3.2:82149760-82149779 | None:intergenic | 55.0% | |
| TGTTTGGATGAGCCCCCAAC+TGG | + | chr3.2:82150206-82150225 | MS.gene055533:CDS | 55.0% | |
| AGGGTATACTCCCTCCGTCC+CGG | + | chr3.2:82150287-82150306 | MS.gene055533:intron | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr3.2:82150499-82150518 | MS.gene055533:intron | 60.0% | |
| TGGCCTGACCCCTTCTTGCT+CGG | - | chr3.2:82150244-82150263 | None:intergenic | 60.0% | |
| CGTCCGAGCAAGAAGGGGTC+AGG | + | chr3.2:82150238-82150257 | MS.gene055533:CDS | 65.0% | |
| GACCCCTTCTTGCTCGGACG+TGG | - | chr3.2:82150238-82150257 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 82149490 | 82151573 | 82149490 | ID=MS.gene055533 |
| chr3.2 | mRNA | 82149490 | 82151573 | 82149490 | ID=MS.gene055533.t1;Parent=MS.gene055533 |
| chr3.2 | exon | 82149490 | 82149807 | 82149490 | ID=MS.gene055533.t1.exon1;Parent=MS.gene055533.t1 |
| chr3.2 | CDS | 82149490 | 82149807 | 82149490 | ID=cds.MS.gene055533.t1;Parent=MS.gene055533.t1 |
| chr3.2 | exon | 82150119 | 82150289 | 82150119 | ID=MS.gene055533.t1.exon2;Parent=MS.gene055533.t1 |
| chr3.2 | CDS | 82150119 | 82150289 | 82150119 | ID=cds.MS.gene055533.t1;Parent=MS.gene055533.t1 |
| chr3.2 | exon | 82150659 | 82150724 | 82150659 | ID=MS.gene055533.t1.exon3;Parent=MS.gene055533.t1 |
| chr3.2 | CDS | 82150659 | 82150724 | 82150659 | ID=cds.MS.gene055533.t1;Parent=MS.gene055533.t1 |
| chr3.2 | exon | 82150865 | 82150933 | 82150865 | ID=MS.gene055533.t1.exon4;Parent=MS.gene055533.t1 |
| chr3.2 | CDS | 82150865 | 82150933 | 82150865 | ID=cds.MS.gene055533.t1;Parent=MS.gene055533.t1 |
| chr3.2 | exon | 82151031 | 82151114 | 82151031 | ID=MS.gene055533.t1.exon5;Parent=MS.gene055533.t1 |
| chr3.2 | CDS | 82151031 | 82151114 | 82151031 | ID=cds.MS.gene055533.t1;Parent=MS.gene055533.t1 |
| chr3.2 | exon | 82151210 | 82151404 | 82151210 | ID=MS.gene055533.t1.exon6;Parent=MS.gene055533.t1 |
| chr3.2 | CDS | 82151210 | 82151404 | 82151210 | ID=cds.MS.gene055533.t1;Parent=MS.gene055533.t1 |
| chr3.2 | exon | 82151496 | 82151573 | 82151496 | ID=MS.gene055533.t1.exon7;Parent=MS.gene055533.t1 |
| chr3.2 | CDS | 82151496 | 82151573 | 82151496 | ID=cds.MS.gene055533.t1;Parent=MS.gene055533.t1 |
| Gene Sequence |
| Protein sequence |
