Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90752.t1 | XP_003615541.2 | 51.1 | 350 | 88 | 8 | 1 | 269 | 66 | 413 | 1.90E-72 | 282.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90752.t1 | Q8GY84 | 43.6 | 280 | 106 | 4 | 44 | 273 | 153 | 430 | 2.4e-44 | 180.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90752.t1 | G7KE08 | 51.1 | 350 | 88 | 8 | 1 | 269 | 66 | 413 | 1.3e-72 | 282.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049669 | MS.gene90752 | 0.810794 | 9.66E-51 | -1.69E-46 |
| MS.gene052333 | MS.gene90752 | 0.815495 | 8.98E-52 | -1.69E-46 |
| MS.gene053166 | MS.gene90752 | 0.803944 | 2.74E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene90752 | 0.815674 | 8.19E-52 | -1.69E-46 |
| MS.gene055367 | MS.gene90752 | 0.809159 | 2.17E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene90752 | 0.828172 | 1.04E-54 | -1.69E-46 |
| MS.gene057026 | MS.gene90752 | 0.801406 | 9.14E-49 | -1.69E-46 |
| MS.gene057156 | MS.gene90752 | -0.810277 | 1.25E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90752.t1 | MTR_5g069330 | 51.143 | 350 | 88 | 8 | 1 | 269 | 66 | 413 | 1.48e-97 | 293 |
| MS.gene90752.t1 | MTR_5g069330 | 51.143 | 350 | 88 | 8 | 1 | 269 | 62 | 409 | 1.73e-97 | 293 |
| MS.gene90752.t1 | MTR_1g009617 | 47.059 | 306 | 83 | 11 | 3 | 269 | 43 | 308 | 8.70e-65 | 208 |
| MS.gene90752.t1 | MTR_7g056830 | 43.213 | 361 | 115 | 10 | 1 | 274 | 68 | 425 | 1.15e-64 | 209 |
| MS.gene90752.t1 | MTR_6g082080 | 44.606 | 343 | 104 | 9 | 1 | 260 | 68 | 407 | 1.75e-64 | 209 |
| MS.gene90752.t1 | MTR_1g022305 | 51.639 | 244 | 100 | 6 | 38 | 269 | 113 | 350 | 5.72e-64 | 208 |
| MS.gene90752.t1 | MTR_1g023070 | 75.385 | 130 | 30 | 2 | 142 | 269 | 38 | 167 | 1.43e-60 | 190 |
| MS.gene90752.t1 | MTR_1g023070 | 73.109 | 119 | 30 | 2 | 142 | 258 | 38 | 156 | 6.05e-53 | 172 |
| MS.gene90752.t1 | MTR_2g066050 | 30.040 | 253 | 124 | 5 | 55 | 254 | 195 | 447 | 9.80e-22 | 95.1 |
| MS.gene90752.t1 | MTR_3g049990 | 24.101 | 278 | 147 | 7 | 38 | 254 | 280 | 554 | 2.45e-16 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90752.t1 | AT5G60990 | 38.525 | 366 | 131 | 9 | 1 | 274 | 68 | 431 | 1.27e-56 | 189 |
| MS.gene90752.t1 | AT1G16280 | 32.129 | 249 | 116 | 4 | 59 | 254 | 205 | 453 | 4.86e-27 | 110 |
| MS.gene90752.t1 | AT5G26742 | 25.417 | 240 | 127 | 6 | 45 | 232 | 147 | 386 | 1.45e-14 | 73.9 |
Find 70 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAATCGCCGCTCTTCATT+TGG | 0.204553 | 1.3:+1584492 | None:intergenic |
| GAAGATCTAGGTTCTCAATT+TGG | 0.278693 | 1.3:-1587109 | MS.gene90752:intron |
| ACAAAGGAAATGACATTAAC+TGG | 0.304562 | 1.3:+1584519 | None:intergenic |
| GCCTTGAATGCGTTCAAGTC+TGG | 0.319856 | 1.3:-1584746 | MS.gene90752:CDS |
| TGAATCGCCGCTCTTCATTT+GGG | 0.343585 | 1.3:+1584493 | None:intergenic |
| ACAAAAGCAAAGAAAGGGTT+AGG | 0.363682 | 1.3:+1587276 | None:intergenic |
| TGTGTCCGGAATAGAATATT+TGG | 0.366385 | 1.3:+1585556 | None:intergenic |
| CGTTGTAGTACAACCTTCTC+TGG | 0.373023 | 1.3:+1582789 | None:intergenic |
| TTGTAGTGAGTTAGCTAGTA+AGG | 0.375561 | 1.3:-1584705 | MS.gene90752:CDS |
| CCCAGACTTGAACGCATTCA+AGG | 0.380609 | 1.3:+1584745 | None:intergenic |
| CATCTTACGTTTGGATCATA+AGG | 0.382752 | 1.3:+1584638 | None:intergenic |
| TATGTGTTTAAGACTTGTAC+AGG | 0.397671 | 1.3:+1586833 | None:intergenic |
| GTAATAAGTAAGTACTTTGT+GGG | 0.398926 | 1.3:+1587246 | None:intergenic |
| TTCTCTGGAAAATATCCTTC+GGG | 0.405386 | 1.3:+1582804 | None:intergenic |
| GTATACCATTGATGTTCTTC+CGG | 0.409653 | 1.3:+1584967 | None:intergenic |
| GCTGTTGAAGGATCGCGTTC+AGG | 0.412450 | 1.3:-1586645 | MS.gene90752:CDS |
| CCTTGCTGCTGCAGTGTGTC+CGG | 0.418156 | 1.3:+1585542 | None:intergenic |
| AATTTGGTCTCAAGGTTGCT+CGG | 0.423455 | 1.3:-1587093 | MS.gene90752:CDS |
| ATCGTCCAAATATTCTATTC+CGG | 0.423833 | 1.3:-1585561 | MS.gene90752:CDS |
| CTTTATGCAAGTTTATCATA+AGG | 0.432547 | 1.3:-1585516 | MS.gene90752:intron |
| AGATATTCCACCGGTAGATA+TGG | 0.440626 | 1.3:-1584678 | MS.gene90752:CDS |
| TTCATCTAAAATGACAGATA+AGG | 0.440863 | 1.3:-1586567 | MS.gene90752:intron |
| CTTCTCTGGAAAATATCCTT+CGG | 0.445786 | 1.3:+1582803 | None:intergenic |
| CAAGAGCAAGAGAAAATCCT+TGG | 0.448775 | 1.3:+1586802 | None:intergenic |
| AAAAGCAAAACTTCCTCAAA+TGG | 0.452304 | 1.3:+1584312 | None:intergenic |
| CCTTGAATGCGTTCAAGTCT+GGG | 0.463606 | 1.3:-1584745 | MS.gene90752:CDS |
| AGGATATTTAGTAGAAGAAG+AGG | 0.463912 | 1.3:-1583923 | MS.gene90752:intron |
| AGGAAATGAAAGAATCCGTT+TGG | 0.464624 | 1.3:-1583954 | MS.gene90752:CDS |
| TGACGCACATCTGCTGTTGA+AGG | 0.467236 | 1.3:-1586657 | MS.gene90752:CDS |
| AGGTTCTCAATTTGGTCTCA+AGG | 0.478670 | 1.3:-1587101 | MS.gene90752:CDS |
| GAGAGCACAAAAGCAAAGAA+AGG | 0.481989 | 1.3:+1587270 | None:intergenic |
| ATTTGGTCTCAAGGTTGCTC+GGG | 0.489772 | 1.3:-1587092 | MS.gene90752:intron |
| ATTGTATACTGCACCATTTG+AGG | 0.495188 | 1.3:-1584325 | MS.gene90752:CDS |
| GCAAAGAAAGGGTTAGGGTT+GGG | 0.503249 | 1.3:+1587282 | None:intergenic |
| GGTTGGGTCCAGCTTCTAAG+AGG | 0.510367 | 1.3:+1587298 | None:intergenic |
| AGAATGATAGAGAAACATAT+AGG | 0.512066 | 1.3:-1584471 | MS.gene90752:intron |
| TTGCAGGCCCTCTTAGAAGC+TGG | 0.514332 | 1.3:-1587306 | MS.gene90752:intron |
| TCTTGCTAGTTTAAAACACC+TGG | 0.529822 | 1.3:-1586784 | MS.gene90752:intron |
| AAAGAATCCGTTTGGAAGAG+TGG | 0.531587 | 1.3:-1583946 | MS.gene90752:CDS |
| AGAAATGTTCTCCGCTCACT+AGG | 0.532344 | 1.3:+1586593 | None:intergenic |
| ATTATATGTACCGCGTGGGA+TGG | 0.545664 | 1.3:-1584548 | MS.gene90752:CDS |
| ATATCCTCCACTCTTCCAAA+CGG | 0.553619 | 1.3:+1583939 | None:intergenic |
| TGTAGTGAGTTAGCTAGTAA+GGG | 0.553873 | 1.3:-1584704 | MS.gene90752:CDS |
| AGAGCACAAAAGCAAAGAAA+GGG | 0.555986 | 1.3:+1587271 | None:intergenic |
| AGCAAAGAAAGGGTTAGGGT+TGG | 0.563651 | 1.3:+1587281 | None:intergenic |
| ACTACAACGACTAAATCAAT+CGG | 0.565111 | 1.3:-1582775 | None:intergenic |
| CAGTTAATCACCATATCTAC+CGG | 0.568504 | 1.3:+1584668 | None:intergenic |
| AATGACCGGAAGAACATCAA+TGG | 0.568972 | 1.3:-1584972 | MS.gene90752:intron |
| TTTGGAAGGGCGTGTTAGTG+AGG | 0.569331 | 1.3:-1584292 | MS.gene90752:CDS |
| TACGAGTGATTCCTAGTGAG+CGG | 0.571900 | 1.3:-1586604 | MS.gene90752:CDS |
| TACATTCTCACTGAAATGAC+CGG | 0.572514 | 1.3:-1584986 | MS.gene90752:CDS |
| GTTGGGTCCAGCTTCTAAGA+GGG | 0.582327 | 1.3:+1587299 | None:intergenic |
| AAGAGCAAGAGAAAATCCTT+GGG | 0.587885 | 1.3:+1586803 | None:intergenic |
| CAAAAGCAAAGAAAGGGTTA+GGG | 0.603059 | 1.3:+1587277 | None:intergenic |
| ATGTGTTTAAGACTTGTACA+GGG | 0.603608 | 1.3:+1586834 | None:intergenic |
| GAATCTGATTGGAAGCCCGA+AGG | 0.635733 | 1.3:-1582819 | MS.gene90752:intron |
| TGTGTTTAAGACTTGTACAG+GGG | 0.637010 | 1.3:+1586835 | None:intergenic |
| TCAAATGGTGCAGTATACAA+TGG | 0.641695 | 1.3:+1584327 | None:intergenic |
| CTTGAATGCGTTCAAGTCTG+GGG | 0.643789 | 1.3:-1584744 | MS.gene90752:CDS |
| CAGGATTATATGTACCGCGT+GGG | 0.652371 | 1.3:-1584552 | MS.gene90752:CDS |
| CTCTTCATTTGGGATCACAA+AGG | 0.656014 | 1.3:+1584503 | None:intergenic |
| TACTAGCTAACTCACTACAA+AGG | 0.661290 | 1.3:+1584708 | None:intergenic |
| GAATCCGTTTGGAAGAGTGG+AGG | 0.665590 | 1.3:-1583943 | MS.gene90752:CDS |
| TAAGGGACTAGATATTCCAC+CGG | 0.666766 | 1.3:-1584687 | MS.gene90752:CDS |
| CCGGACACACTGCAGCAGCA+AGG | 0.669147 | 1.3:-1585542 | MS.gene90752:CDS |
| AAACACATACAACACACCCA+AGG | 0.675985 | 1.3:-1586819 | MS.gene90752:CDS |
| TTAATCACCATATCTACCGG+TGG | 0.691482 | 1.3:+1584671 | None:intergenic |
| TTGTGATCCCAAATGAAGAG+CGG | 0.693482 | 1.3:-1584500 | MS.gene90752:CDS |
| ACAGGATTATATGTACCGCG+TGG | 0.696590 | 1.3:-1584553 | MS.gene90752:intron |
| CTGGAGCAATCCATCCCACG+CGG | 0.776648 | 1.3:+1584538 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATATAATAATTTTTTAT+AGG | - | chr1.3:1586554-1586573 | MS.gene90752:intron | 0.0% |
| !! | AATATAAAAAGAATATTACA+AGG | - | chr1.3:1583341-1583360 | MS.gene90752:intron | 10.0% |
| !! | AATTGTGATTATATTATTAT+TGG | - | chr1.3:1587259-1587278 | MS.gene90752:intron | 10.0% |
| !! | TAAATCATTGAATATAAAAT+TGG | + | chr1.3:1585969-1585988 | None:intergenic | 10.0% |
| !! | TAGCAAATATTATATTAATA+TGG | - | chr1.3:1587823-1587842 | MS.gene90752:intron | 10.0% |
| !!! | AAAATTTATATTTTCTTCTT+TGG | + | chr1.3:1587974-1587993 | None:intergenic | 10.0% |
| !!! | AAATTTACAGTTTTAATAAT+AGG | - | chr1.3:1585213-1585232 | MS.gene90752:intron | 10.0% |
| !!! | ATATTCTTTTTTTATGTTTA+TGG | + | chr1.3:1583320-1583339 | None:intergenic | 10.0% |
| !!! | ATGAATTGTTATTATATTAT+TGG | - | chr1.3:1588417-1588436 | MS.gene90752:intron | 10.0% |
| !!! | TAAAAAATTTCATTAGTTTT+GGG | - | chr1.3:1586240-1586259 | MS.gene90752:intron | 10.0% |
| !!! | TTAAAAAATTTCATTAGTTT+TGG | - | chr1.3:1586239-1586258 | MS.gene90752:intron | 10.0% |
| !! | AAAAAAATTGTAAATAGCAT+CGG | + | chr1.3:1585737-1585756 | None:intergenic | 15.0% |
| !! | AAATAAAAAATTAGAAGTCA+TGG | + | chr1.3:1584462-1584481 | None:intergenic | 15.0% |
| !! | AACAAATATTAATCTTTCAA+AGG | + | chr1.3:1585352-1585371 | None:intergenic | 15.0% |
| !! | ACAAATATTAATCTTTCAAA+GGG | + | chr1.3:1585351-1585370 | None:intergenic | 15.0% |
| !! | AGTAAAATAAAAAAACTTAG+CGG | - | chr1.3:1583634-1583653 | MS.gene90752:intron | 15.0% |
| !! | ATAAATGGAAGTTAATAAAA+TGG | - | chr1.3:1585495-1585514 | MS.gene90752:intron | 15.0% |
| !! | ATATAATAATAATAAGTTGC+TGG | - | chr1.3:1583736-1583755 | MS.gene90752:intron | 15.0% |
| !! | GTTATAAATACTAGAATAAT+AGG | + | chr1.3:1585054-1585073 | None:intergenic | 15.0% |
| !! | TATAATAATAATAAGTTGCT+GGG | - | chr1.3:1583737-1583756 | MS.gene90752:intron | 15.0% |
| !! | TGGTTTATATACATTAAAAT+GGG | - | chr1.3:1585627-1585646 | MS.gene90752:intron | 15.0% |
| !! | TTGGTTTATATACATTAAAA+TGG | - | chr1.3:1585626-1585645 | MS.gene90752:intron | 15.0% |
| !!! | AAAAAAAGTTTTTGTTGAAA+CGG | - | chr1.3:1588034-1588053 | MS.gene90752:intron | 15.0% |
| !!! | AAAACTTTTCTATGTAAAAA+TGG | + | chr1.3:1587151-1587170 | None:intergenic | 15.0% |
| !!! | AAAATTTGTTATACTTTAGT+TGG | - | chr1.3:1587873-1587892 | MS.gene90752:intron | 15.0% |
| !!! | AATTCAACATTATTTTGATA+AGG | + | chr1.3:1585857-1585876 | None:intergenic | 15.0% |
| !!! | ATAAAATTCTTTGGAAAAAA+AGG | + | chr1.3:1584283-1584302 | None:intergenic | 15.0% |
| !!! | ATTCATTTTTATCTAGTTAT+CGG | + | chr1.3:1588383-1588402 | None:intergenic | 15.0% |
| !!! | TCAACAAAAACTTTTTTTTA+GGG | + | chr1.3:1588032-1588051 | None:intergenic | 15.0% |
| !!! | TGTAACATATTTATTTTATC+TGG | - | chr1.3:1588241-1588260 | MS.gene90752:intron | 15.0% |
| !!! | TGTTTGTATTTTATTTATGT+AGG | - | chr1.3:1588487-1588506 | MS.gene90752:intron | 15.0% |
| !!! | TTCAACAAAAACTTTTTTTT+AGG | + | chr1.3:1588033-1588052 | None:intergenic | 15.0% |
| !!! | TTTAATACTGAATATGATTT+TGG | - | chr1.3:1586114-1586133 | MS.gene90752:intron | 15.0% |
| !!! | TTTATATTCTTTTTTTATGG+TGG | + | chr1.3:1583386-1583405 | None:intergenic | 15.0% |
| !!! | TTTTGATTAGTATTAATAAG+TGG | - | chr1.3:1585442-1585461 | MS.gene90752:intron | 15.0% |
| !!! | TTTTTACAAAAGATAGAAAA+GGG | - | chr1.3:1583489-1583508 | MS.gene90752:intron | 15.0% |
| !!! | TTTTTTACAAAAGATAGAAA+AGG | - | chr1.3:1583488-1583507 | MS.gene90752:intron | 15.0% |
| !! | AAGTTAATAAAATGGATGTT+AGG | - | chr1.3:1585503-1585522 | MS.gene90752:intron | 20.0% |
| !! | AATGTTAGTGATTAGTATTT+AGG | - | chr1.3:1588062-1588081 | MS.gene90752:intron | 20.0% |
| !! | AGTTAATAAAATGGATGTTA+GGG | - | chr1.3:1585504-1585523 | MS.gene90752:intron | 20.0% |
| !! | ATACTAATCACTAACATTAT+TGG | + | chr1.3:1588060-1588079 | None:intergenic | 20.0% |
| !! | ATATTCAATGATTTAACACA+TGG | - | chr1.3:1585974-1585993 | MS.gene90752:intron | 20.0% |
| !! | ATCACAAAATAGATAACTTT+AGG | - | chr1.3:1583555-1583574 | MS.gene90752:intron | 20.0% |
| !! | ATGTAAAAATGGAAATAAAC+AGG | + | chr1.3:1587140-1587159 | None:intergenic | 20.0% |
| !! | ATTATTTATGATTGCATTGA+TGG | - | chr1.3:1586284-1586303 | MS.gene90752:intron | 20.0% |
| !! | ATTGAATACTTCTAACAAAT+TGG | - | chr1.3:1586192-1586211 | MS.gene90752:intron | 20.0% |
| !! | ATTGTCAAAACGATTAATTA+AGG | + | chr1.3:1583439-1583458 | None:intergenic | 20.0% |
| !! | CAAATATTAATCTTTCAAAG+GGG | + | chr1.3:1585350-1585369 | None:intergenic | 20.0% |
| !! | GAAGAAATTAATTATAACAC+AGG | + | chr1.3:1586501-1586520 | None:intergenic | 20.0% |
| !! | GATAATGACATAAAATTCTT+TGG | + | chr1.3:1584292-1584311 | None:intergenic | 20.0% |
| !! | GTAAAATAAAAAAACTTAGC+GGG | - | chr1.3:1583635-1583654 | MS.gene90752:intron | 20.0% |
| !! | GTATTTAATCATGTTACTAT+TGG | - | chr1.3:1587630-1587649 | MS.gene90752:intron | 20.0% |
| !! | TATGCATTAATTCATAGATT+AGG | - | chr1.3:1583813-1583832 | MS.gene90752:intron | 20.0% |
| !! | TCACAAAATAGATAACTTTA+GGG | - | chr1.3:1583556-1583575 | MS.gene90752:intron | 20.0% |
| !! | TGACTCATATACTAATAATT+GGG | + | chr1.3:1586460-1586479 | None:intergenic | 20.0% |
| !! | TGATTGTTTGTTTAAGAAAA+AGG | + | chr1.3:1584171-1584190 | None:intergenic | 20.0% |
| !! | TTAAACAAACAATCAAACTA+GGG | - | chr1.3:1584176-1584195 | MS.gene90752:intron | 20.0% |
| !! | TTATGAACTTGTAAACATTA+CGG | + | chr1.3:1585312-1585331 | None:intergenic | 20.0% |
| !! | TTTATTTCAAAGCAGATAAA+TGG | - | chr1.3:1585480-1585499 | MS.gene90752:intron | 20.0% |
| !!! | AAAATTTTTGATAAAAAGCG+TGG | - | chr1.3:1583043-1583062 | MS.gene90752:intron | 20.0% |
| !!! | AATATTTGTTACACTTTAGT+TGG | - | chr1.3:1585362-1585381 | MS.gene90752:intron | 20.0% |
| !!! | AATTTTAAACATCTTTCATG+AGG | - | chr1.3:1585687-1585706 | MS.gene90752:intron | 20.0% |
| !!! | AATTTTCAGTTGTAGTAATA+TGG | - | chr1.3:1587725-1587744 | MS.gene90752:intron | 20.0% |
| !!! | ACAAGAATGATTGATTTAAT+CGG | + | chr1.3:1587450-1587469 | None:intergenic | 20.0% |
| !!! | ACATATTTATTTTATCTGGA+TGG | - | chr1.3:1588245-1588264 | MS.gene90752:intron | 20.0% |
| !!! | GTACAAGTATTACTTTTTTT+AGG | - | chr1.3:1586977-1586996 | MS.gene90752:intron | 20.0% |
| !!! | TGAAAATGAAATGATGTTTT+GGG | - | chr1.3:1587941-1587960 | MS.gene90752:intron | 20.0% |
| !!! | TGTTTGTATTTTATTTGTGT+AGG | - | chr1.3:1587363-1587382 | MS.gene90752:intron | 20.0% |
| !!! | TTCTTTTTTTATGTTTATGG+TGG | + | chr1.3:1583317-1583336 | None:intergenic | 20.0% |
| !!! | TTGAAAATGAAATGATGTTT+TGG | - | chr1.3:1587940-1587959 | MS.gene90752:intron | 20.0% |
| !!! | TTGCATCTTTTTTTTTTTTG+TGG | + | chr1.3:1583266-1583285 | None:intergenic | 20.0% |
| !!! | TTGTAATACATTTTTATGCA+AGG | - | chr1.3:1585147-1585166 | MS.gene90752:intron | 20.0% |
| !!! | TTTTCAACATTCCTAAATTT+AGG | + | chr1.3:1587927-1587946 | None:intergenic | 20.0% |
| !!! | TTTTGTTCTTTATATATTGC+AGG | - | chr1.3:1584015-1584034 | MS.gene90752:intron | 20.0% |
| !!! | TTTTTATTTCTTACTCTTCA+AGG | - | chr1.3:1584473-1584492 | MS.gene90752:CDS | 20.0% |
| !!! | TTTTTATTTTATCGTGCTAT+TGG | + | chr1.3:1583771-1583790 | None:intergenic | 20.0% |
| ! | AAATGTTAAGATAGCATATC+TGG | + | chr1.3:1584873-1584892 | None:intergenic | 25.0% |
| ! | ACAACACTTACAATAATAAG+AGG | + | chr1.3:1584403-1584422 | None:intergenic | 25.0% |
| ! | ACAATGCATAATAATATGCA+AGG | - | chr1.3:1583218-1583237 | MS.gene90752:intron | 25.0% |
| ! | ACTCCAATGAACATAAATTA+TGG | - | chr1.3:1587555-1587574 | MS.gene90752:intron | 25.0% |
| ! | AGAATGATAGAGAAACATAT+AGG | - | chr1.3:1586866-1586885 | MS.gene90752:intron | 25.0% |
| ! | AGTAATAAGTAAGTACTTTG+TGG | + | chr1.3:1584095-1584114 | None:intergenic | 25.0% |
| ! | AGTGTACATATTATTTCATC+CGG | - | chr1.3:1585654-1585673 | MS.gene90752:intron | 25.0% |
| ! | ATTGTATTATTGTATGTCTC+TGG | + | chr1.3:1586038-1586057 | None:intergenic | 25.0% |
| ! | ATTGTTATAATTGATGAGTC+CGG | - | chr1.3:1587199-1587218 | MS.gene90752:intron | 25.0% |
| ! | CAATTATTAGTATATGAGTC+AGG | - | chr1.3:1586459-1586478 | MS.gene90752:intron | 25.0% |
| ! | CTCCAATGAACATAAATTAT+GGG | - | chr1.3:1587556-1587575 | MS.gene90752:intron | 25.0% |
| ! | CTGACTCATATACTAATAAT+TGG | + | chr1.3:1586461-1586480 | None:intergenic | 25.0% |
| ! | CTTAAACAAACAATCAAACT+AGG | - | chr1.3:1584175-1584194 | MS.gene90752:intron | 25.0% |
| ! | CTTCAAATAGCTATAGAAAT+AGG | + | chr1.3:1584339-1584358 | None:intergenic | 25.0% |
| ! | CTTTATGCAAGTTTATCATA+AGG | - | chr1.3:1585821-1585840 | MS.gene90752:intron | 25.0% |
| ! | GTAATAAGTAAGTACTTTGT+GGG | + | chr1.3:1584094-1584113 | None:intergenic | 25.0% |
| ! | GTAATGTTTACAAGTTCATA+AGG | - | chr1.3:1585311-1585330 | MS.gene90752:intron | 25.0% |
| ! | GTTAATAAAATGGATGTTAG+GGG | - | chr1.3:1585505-1585524 | MS.gene90752:intron | 25.0% |
| !! | ACGTTGAAAATTCTAAAGAA+AGG | - | chr1.3:1585573-1585592 | MS.gene90752:intron | 25.0% |
| !! | AGTATTTTTCTACTTCACAA+AGG | - | chr1.3:1588087-1588106 | MS.gene90752:intron | 25.0% |
| !! | GAAGTGTCATAGTATATAAT+TGG | - | chr1.3:1586955-1586974 | MS.gene90752:intron | 25.0% |
| !! | TATCAAGACTTTAAAAGATG+AGG | + | chr1.3:1588001-1588020 | None:intergenic | 25.0% |
| !! | TTCATCTAAAATGACAGATA+AGG | - | chr1.3:1584770-1584789 | MS.gene90752:intron | 25.0% |
| !! | TTTTTATAGGCAAAGAAACT+TGG | - | chr1.3:1586567-1586586 | MS.gene90752:intron | 25.0% |
| !!! | ATTTCATTCTACTTTTGTTG+AGG | - | chr1.3:1585920-1585939 | MS.gene90752:intron | 25.0% |
| !!! | CATCTTTTTTTTTTTTGTGG+TGG | + | chr1.3:1583263-1583282 | None:intergenic | 25.0% |
| !!! | GAATTTTGAAAATCTAGTCA+AGG | - | chr1.3:1587786-1587805 | MS.gene90752:intron | 25.0% |
| !!! | GTTTTAATGCCTTTTTCTTA+TGG | - | chr1.3:1585384-1585403 | MS.gene90752:intron | 25.0% |
| !!! | TAGTTGCATTTTTTTTGTAG+TGG | + | chr1.3:1583161-1583180 | None:intergenic | 25.0% |
| !!! | TCTTTAAAATGGCAAAGTAA+AGG | + | chr1.3:1586932-1586951 | None:intergenic | 25.0% |
| !!! | TTCCTTTTTATCTAGTTTAC+CGG | + | chr1.3:1587221-1587240 | None:intergenic | 25.0% |
| !!! | TTGGTTTTAATGCTTTCTTA+GGG | - | chr1.3:1587892-1587911 | MS.gene90752:intron | 25.0% |
| !!! | TTTCATTCTACTTTTGTTGA+GGG | - | chr1.3:1585921-1585940 | MS.gene90752:intron | 25.0% |
| AAAAGCAAAACTTCCTCAAA+TGG | + | chr1.3:1587028-1587047 | None:intergenic | 30.0% | |
| AAACAACACTCAGACTATTA+AGG | - | chr1.3:1586159-1586178 | MS.gene90752:intron | 30.0% | |
| AAAGAATATTACAAGGTCTG+AGG | - | chr1.3:1583348-1583367 | MS.gene90752:intron | 30.0% | |
| AAATAAAAAACACGACGTTC+AGG | - | chr1.3:1583782-1583801 | MS.gene90752:intron | 30.0% | |
| AAGAAAGGAAAAGTTTCCTT+AGG | - | chr1.3:1585588-1585607 | MS.gene90752:intron | 30.0% | |
| AAGTAGTCTCTTATCATGAA+TGG | + | chr1.3:1583096-1583115 | None:intergenic | 30.0% | |
| ACAAAGGAAATGACATTAAC+TGG | + | chr1.3:1586821-1586840 | None:intergenic | 30.0% | |
| AGACTACTTAGAATGTGAAA+TGG | - | chr1.3:1583107-1583126 | MS.gene90752:intron | 30.0% | |
| AGGAAATGAAAGAATCTGAT+TGG | - | chr1.3:1588507-1588526 | MS.gene90752:intron | 30.0% | |
| AGGATAAATACTTTGAGCTT+GGG | + | chr1.3:1585094-1585113 | None:intergenic | 30.0% | |
| AGGATATTTAGTAGAAGAAG+AGG | - | chr1.3:1587414-1587433 | MS.gene90752:intron | 30.0% | |
| AGTATTTATCCTACCATTCT+TGG | - | chr1.3:1585102-1585121 | MS.gene90752:intron | 30.0% | |
| ATATTAACCGTGGTTATGAA+CGG | - | chr1.3:1582942-1582961 | MS.gene90752:intron | 30.0% | |
| ATCAAATATTCGACCAAGAA+TGG | + | chr1.3:1585118-1585137 | None:intergenic | 30.0% | |
| ATCGTCCAAATATTCTATTC+CGG | - | chr1.3:1585776-1585795 | MS.gene90752:intron | 30.0% | |
| ATTATATGCAGTACTCTATC+TGG | + | chr1.3:1583723-1583742 | None:intergenic | 30.0% | |
| CAATGAACATAAATTATGGG+TGG | - | chr1.3:1587559-1587578 | MS.gene90752:intron | 30.0% | |
| CACCCATAATTTATGTTCAT+TGG | + | chr1.3:1587561-1587580 | None:intergenic | 30.0% | |
| CCTAATAGTCCATAAGAAAA+AGG | + | chr1.3:1585396-1585415 | None:intergenic | 30.0% | |
| CTAATCAAAATTGTCCTTGT+TGG | + | chr1.3:1585432-1585451 | None:intergenic | 30.0% | |
| CTTCTAACAAATTGGCTATT+TGG | - | chr1.3:1586200-1586219 | MS.gene90752:intron | 30.0% | |
| GACAGATAAGGTAAATATGT+AGG | - | chr1.3:1584782-1584801 | MS.gene90752:intron | 30.0% | |
| GATGCAACTAACTATATACA+AGG | - | chr1.3:1583279-1583298 | MS.gene90752:intron | 30.0% | |
| GATTCCTTAAACACATACTT+TGG | + | chr1.3:1585275-1585294 | None:intergenic | 30.0% | |
| GCTTTGATTCTTAAGAATCT+TGG | - | chr1.3:1586422-1586441 | MS.gene90752:intron | 30.0% | |
| GGATTGATATATATTAACCG+TGG | - | chr1.3:1582932-1582951 | MS.gene90752:intron | 30.0% | |
| GTAATTTCAAGCATCTTTCA+TGG | - | chr1.3:1588272-1588291 | MS.gene90752:intron | 30.0% | |
| TAATGTATATAAACCAACCG+AGG | + | chr1.3:1585623-1585642 | None:intergenic | 30.0% | |
| TACATATTATTTCATCCGGA+GGG | - | chr1.3:1585658-1585677 | MS.gene90752:intron | 30.0% | |
| TAGGATAAATACTTTGAGCT+TGG | + | chr1.3:1585095-1585114 | None:intergenic | 30.0% | |
| TATATAGCACATCTTACGTT+TGG | + | chr1.3:1586711-1586730 | None:intergenic | 30.0% | |
| TATGATGAGTGATTTGAACT+TGG | - | chr1.3:1587303-1587322 | MS.gene90752:CDS | 30.0% | |
| TATGGCATGCATTAAAATAC+AGG | - | chr1.3:1584923-1584942 | MS.gene90752:intron | 30.0% | |
| TATTTCTTACTCTTCAAGGT+CGG | - | chr1.3:1584477-1584496 | MS.gene90752:CDS | 30.0% | |
| TCAATCAATCAAATCATACC+AGG | + | chr1.3:1584574-1584593 | None:intergenic | 30.0% | |
| TCAGAGAATATGTACAGAAA+AGG | + | chr1.3:1584903-1584922 | None:intergenic | 30.0% | |
| TCTGTACATATTCTCTGATA+TGG | - | chr1.3:1584905-1584924 | MS.gene90752:intron | 30.0% | |
| TGTTAGCAATTTGTAAACCA+AGG | + | chr1.3:1584203-1584222 | None:intergenic | 30.0% | |
| TTAAATAATGCTGCAACTAG+CGG | + | chr1.3:1583015-1583034 | None:intergenic | 30.0% | |
| TTAGAATGTGAAATGGCAAA+TGG | - | chr1.3:1583114-1583133 | MS.gene90752:intron | 30.0% | |
| TTATATGCAGTACTCTATCT+GGG | + | chr1.3:1583722-1583741 | None:intergenic | 30.0% | |
| TTGGGAGACTTTATCAAATT+TGG | + | chr1.3:1585076-1585095 | None:intergenic | 30.0% | |
| TTTATTGGATTGACCAACAT+GGG | - | chr1.3:1583666-1583685 | MS.gene90752:intron | 30.0% | |
| ! | ATGTGTTTAAGACTTGTACA+GGG | + | chr1.3:1584506-1584525 | None:intergenic | 30.0% |
| ! | ATTTGAGGAAGTTTTGCTTT+TGG | - | chr1.3:1587027-1587046 | MS.gene90752:intron | 30.0% |
| ! | GACACTTCTGTTCTTTAAAA+TGG | + | chr1.3:1586943-1586962 | None:intergenic | 30.0% |
| ! | TATGTGTTTAAGACTTGTAC+AGG | + | chr1.3:1584507-1584526 | None:intergenic | 30.0% |
| ! | TTAGGCATATTTCTTGTTGT+CGG | + | chr1.3:1586528-1586547 | None:intergenic | 30.0% |
| ! | TTTAAAATTACACTTCCCTC+CGG | + | chr1.3:1585676-1585695 | None:intergenic | 30.0% |
| ! | TTTTATTGGATTGACCAACA+TGG | - | chr1.3:1583665-1583684 | MS.gene90752:intron | 30.0% |
| !! | ATTTTATCGTGCTATTGGAT+TGG | + | chr1.3:1583766-1583785 | None:intergenic | 30.0% |
| !! | CCTTTTTCTTATGGACTATT+AGG | - | chr1.3:1585393-1585412 | MS.gene90752:intron | 30.0% |
| !! | TTCATTCTACTTTTGTTGAG+GGG | - | chr1.3:1585922-1585941 | MS.gene90752:intron | 30.0% |
| !!! | GTTGGTTTTAATGCTTTCTT+AGG | - | chr1.3:1587891-1587910 | MS.gene90752:intron | 30.0% |
| !!! | TAGCGGGTTCTTAATTTTAT+TGG | - | chr1.3:1583651-1583670 | MS.gene90752:intron | 30.0% |
| AAAAATACCGCTGTCAAGAT+TGG | + | chr1.3:1582805-1582824 | None:intergenic | 35.0% | |
| AAAATACCGCTGTCAAGATT+GGG | + | chr1.3:1582804-1582823 | None:intergenic | 35.0% | |
| AAAGGAAAAGTTTCCTTAGG+TGG | - | chr1.3:1585591-1585610 | MS.gene90752:intron | 35.0% | |
| AAGAGCAAGAGAAAATCCTT+GGG | + | chr1.3:1584537-1584556 | None:intergenic | 35.0% | |
| AATATTCGACCAAGAATGGT+AGG | + | chr1.3:1585114-1585133 | None:intergenic | 35.0% | |
| AATTGCACTCTCATGATTTC+AGG | - | chr1.3:1585239-1585258 | MS.gene90752:intron | 35.0% | |
| AATTGCTCTCATGTGATTTC+AGG | - | chr1.3:1587750-1587769 | MS.gene90752:intron | 35.0% | |
| ACAAAAGCAAAGAAAGGGTT+AGG | + | chr1.3:1584064-1584083 | None:intergenic | 35.0% | |
| AGAGCACAAAAGCAAAGAAA+GGG | + | chr1.3:1584069-1584088 | None:intergenic | 35.0% | |
| AGGAAAAGATGGCAAAGTAA+AGG | + | chr1.3:1586912-1586931 | None:intergenic | 35.0% | |
| AGGAAATGAAAGAATCCGTT+TGG | - | chr1.3:1587383-1587402 | MS.gene90752:intron | 35.0% | |
| AGTTCTCTCTGAATCTTAAG+CGG | + | chr1.3:1583924-1583943 | None:intergenic | 35.0% | |
| ATAATAATATGCAAGGTCCG+GGG | - | chr1.3:1583225-1583244 | MS.gene90752:intron | 35.0% | |
| ATGAAATCATTCACAGACCT+AGG | - | chr1.3:1583845-1583864 | MS.gene90752:intron | 35.0% | |
| ATTGTATACTGCACCATTTG+AGG | - | chr1.3:1587012-1587031 | MS.gene90752:intron | 35.0% | |
| ATTTCTTACTCTTCAAGGTC+GGG | - | chr1.3:1584478-1584497 | MS.gene90752:CDS | 35.0% | |
| CAAAAGCAAAGAAAGGGTTA+GGG | + | chr1.3:1584063-1584082 | None:intergenic | 35.0% | |
| CAGTTAATCACCATATCTAC+CGG | + | chr1.3:1586672-1586691 | None:intergenic | 35.0% | |
| CATAATAATATGCAAGGTCC+GGG | - | chr1.3:1583224-1583243 | MS.gene90752:intron | 35.0% | |
| CATCTTACGTTTGGATCATA+AGG | + | chr1.3:1586702-1586721 | None:intergenic | 35.0% | |
| CCATCCAAAGTATGTGTTTA+AGG | - | chr1.3:1585268-1585287 | MS.gene90752:intron | 35.0% | |
| CCTTAAACACATACTTTGGA+TGG | + | chr1.3:1585271-1585290 | None:intergenic | 35.0% | |
| CTAGGCTTATCTTCTGAATT+GGG | - | chr1.3:1583863-1583882 | MS.gene90752:intron | 35.0% | |
| CTCAGCAATAGTAACAACAA+TGG | + | chr1.3:1585027-1585046 | None:intergenic | 35.0% | |
| CTTGTGAAAAACAACTGTGT+TGG | - | chr1.3:1583892-1583911 | MS.gene90752:intron | 35.0% | |
| GAAATGGCAAATGGAAGTAA+TGG | - | chr1.3:1583123-1583142 | MS.gene90752:intron | 35.0% | |
| GAAGATCTAGGTTCTCAATT+TGG | - | chr1.3:1584228-1584247 | MS.gene90752:intron | 35.0% | |
| GAGTCAGGTAACTTTACTAT+AGG | - | chr1.3:1586474-1586493 | MS.gene90752:intron | 35.0% | |
| GATAGAGAAACATATAGGTG+AGG | - | chr1.3:1586871-1586890 | MS.gene90752:intron | 35.0% | |
| GCATAATAATATGCAAGGTC+CGG | - | chr1.3:1583223-1583242 | MS.gene90752:intron | 35.0% | |
| GGACTAACAGACCTAAATTT+AGG | - | chr1.3:1587913-1587932 | MS.gene90752:intron | 35.0% | |
| GTACATATTATTTCATCCGG+AGG | - | chr1.3:1585657-1585676 | MS.gene90752:intron | 35.0% | |
| GTATACCATTGATGTTCTTC+CGG | + | chr1.3:1586373-1586392 | None:intergenic | 35.0% | |
| GTCCGGTAAACTAGATAAAA+AGG | - | chr1.3:1587216-1587235 | MS.gene90752:intron | 35.0% | |
| GTCTCTTATCATGAATGGAA+AGG | + | chr1.3:1583091-1583110 | None:intergenic | 35.0% | |
| TAAACAAACTAACGAGCTCA+CGG | + | chr1.3:1588178-1588197 | None:intergenic | 35.0% | |
| TAACGATTAAAGGAGTTGGA+AGG | + | chr1.3:1588126-1588145 | None:intergenic | 35.0% | |
| TACATTCTCACTGAAATGAC+CGG | - | chr1.3:1586351-1586370 | MS.gene90752:intron | 35.0% | |
| TACTAGCTAACTCACTACAA+AGG | + | chr1.3:1586632-1586651 | None:intergenic | 35.0% | |
| TAGTTGGAGCTAACGATTAA+AGG | + | chr1.3:1588136-1588155 | None:intergenic | 35.0% | |
| TCAAATGGTGCAGTATACAA+TGG | + | chr1.3:1587013-1587032 | None:intergenic | 35.0% | |
| TGAACATAAATTATGGGTGG+TGG | - | chr1.3:1587562-1587581 | MS.gene90752:intron | 35.0% | |
| TGGCAAAGTAAAGGAAAAGA+TGG | + | chr1.3:1586923-1586942 | None:intergenic | 35.0% | |
| TGGCTAATGCTATAGGAAAA+AGG | + | chr1.3:1584853-1584872 | None:intergenic | 35.0% | |
| TGTAGTGAGTTAGCTAGTAA+GGG | - | chr1.3:1586633-1586652 | MS.gene90752:CDS | 35.0% | |
| TGTGTCCGGAATAGAATATT+TGG | + | chr1.3:1585784-1585803 | None:intergenic | 35.0% | |
| TTAACTCAGTTGCACATGTA+AGG | - | chr1.3:1583590-1583609 | MS.gene90752:intron | 35.0% | |
| TTCATGATTGTGTGATCTAC+AGG | - | chr1.3:1586766-1586785 | MS.gene90752:intron | 35.0% | |
| TTGTAGTGAGTTAGCTAGTA+AGG | - | chr1.3:1586632-1586651 | MS.gene90752:CDS | 35.0% | |
| ! | CTTCTCTGGAAAATATCCTT+CGG | + | chr1.3:1588537-1588556 | None:intergenic | 35.0% |
| ! | GCTAACAACTTTGAAGATCT+AGG | - | chr1.3:1584216-1584235 | MS.gene90752:intron | 35.0% |
| ! | GGTTTGGTAGCTTAATTAGT+TGG | + | chr1.3:1588152-1588171 | None:intergenic | 35.0% |
| ! | TCTTGCTAGTTTAAAACACC+TGG | - | chr1.3:1584553-1584572 | MS.gene90752:intron | 35.0% |
| ! | TGTGTTTAAGACTTGTACAG+GGG | + | chr1.3:1584505-1584524 | None:intergenic | 35.0% |
| ! | TTCTCTGGAAAATATCCTTC+GGG | + | chr1.3:1588536-1588555 | None:intergenic | 35.0% |
| ! | TTTTATGTTTATGGTGGCTG+AGG | + | chr1.3:1583311-1583330 | None:intergenic | 35.0% |
| !! | AAATAGCATCGGTGTACATA+CGG | + | chr1.3:1585726-1585745 | None:intergenic | 35.0% |
| !! | AGGAAGTTTTGCTTTTGGAA+GGG | - | chr1.3:1587032-1587051 | MS.gene90752:intron | 35.0% |
| !!! | CATTTTTTTTGTAGTGGCTG+TGG | + | chr1.3:1583155-1583174 | None:intergenic | 35.0% |
| AAACACATACAACACACCCA+AGG | - | chr1.3:1584518-1584537 | MS.gene90752:CDS | 40.0% | |
| AAAGAATCCGTTTGGAAGAG+TGG | - | chr1.3:1587391-1587410 | MS.gene90752:intron | 40.0% | |
| AACAATCAAACTAGGGACCT+TGG | - | chr1.3:1584183-1584202 | MS.gene90752:intron | 40.0% | |
| AATGACCGGAAGAACATCAA+TGG | - | chr1.3:1586365-1586384 | MS.gene90752:intron | 40.0% | |
| AATTTGGTCTCAAGGTTGCT+CGG | - | chr1.3:1584244-1584263 | MS.gene90752:intron | 40.0% | |
| ACAAGGTAAAGATGACGTGT+TGG | - | chr1.3:1583959-1583978 | MS.gene90752:intron | 40.0% | |
| ACTTCACAAAGGTTTGAACC+CGG | - | chr1.3:1588098-1588117 | MS.gene90752:intron | 40.0% | |
| AGATATTCCACCGGTAGATA+TGG | - | chr1.3:1586659-1586678 | MS.gene90752:CDS | 40.0% | |
| AGGTTCTCAATTTGGTCTCA+AGG | - | chr1.3:1584236-1584255 | MS.gene90752:intron | 40.0% | |
| ATATCCTCCACTCTTCCAAA+CGG | + | chr1.3:1587401-1587420 | None:intergenic | 40.0% | |
| ATCTTTACCTTGTAGCGCAA+GGG | + | chr1.3:1583952-1583971 | None:intergenic | 40.0% | |
| ATGATTCCCAATCTTGACAG+CGG | - | chr1.3:1582795-1582814 | MS.gene90752:CDS | 40.0% | |
| ATGCGAAGAAGCTTTCTGAA+AGG | + | chr1.3:1584949-1584968 | None:intergenic | 40.0% | |
| ATGGTATACACTCAGCATTG+TGG | - | chr1.3:1586384-1586403 | MS.gene90752:intron | 40.0% | |
| ATTGTGGTAAACGCTTCTTC+TGG | - | chr1.3:1586400-1586419 | MS.gene90752:intron | 40.0% | |
| CAAGAGCAAGAGAAAATCCT+TGG | + | chr1.3:1584538-1584557 | None:intergenic | 40.0% | |
| CAATTTCATGCTTCTTGCAC+AGG | - | chr1.3:1586314-1586333 | MS.gene90752:intron | 40.0% | |
| CCAATTCAGAAGATAAGCCT+AGG | + | chr1.3:1583865-1583884 | None:intergenic | 40.0% | |
| CCTAGGCTTATCTTCTGAAT+TGG | - | chr1.3:1583862-1583881 | MS.gene90752:intron | 40.0% | |
| GAAAATACAGCAGACCAACA+AGG | - | chr1.3:1585415-1585434 | MS.gene90752:intron | 40.0% | |
| GAGCTAACGATTAAAGGAGT+TGG | + | chr1.3:1588130-1588149 | None:intergenic | 40.0% | |
| GCATATCTGGCTAATGCTAT+AGG | + | chr1.3:1584860-1584879 | None:intergenic | 40.0% | |
| GGATTGATATACCAAGTCAC+TGG | + | chr1.3:1584362-1584381 | None:intergenic | 40.0% | |
| GTGTTTAAGGAATCCTGTGA+AGG | - | chr1.3:1585281-1585300 | MS.gene90752:intron | 40.0% | |
| TAAGGGACTAGATATTCCAC+CGG | - | chr1.3:1586650-1586669 | MS.gene90752:CDS | 40.0% | |
| TAGCATTCCGTTCATAACCA+CGG | + | chr1.3:1582952-1582971 | None:intergenic | 40.0% | |
| TCATGTATGACCTGCTCAAA+AGG | + | chr1.3:1584663-1584682 | None:intergenic | 40.0% | |
| TGATTCTATCCCAACGAAGT+CGG | - | chr1.3:1585887-1585906 | MS.gene90752:intron | 40.0% | |
| TTAATCACCATATCTACCGG+TGG | + | chr1.3:1586669-1586688 | None:intergenic | 40.0% | |
| TTGTGATCCCAAATGAAGAG+CGG | - | chr1.3:1586837-1586856 | MS.gene90752:CDS | 40.0% | |
| ! | CGAAGGATATTTTCCAGAGA+AGG | - | chr1.3:1588535-1588554 | MS.gene90752:intron | 40.0% |
| ! | CTCTTCATTTGGGATCACAA+AGG | + | chr1.3:1586837-1586856 | None:intergenic | 40.0% |
| ! | GAGAGCACAAAAGCAAAGAA+AGG | + | chr1.3:1584070-1584089 | None:intergenic | 40.0% |
| ! | TACTCTATCTGGGTTTGGTT+GGG | + | chr1.3:1583712-1583731 | None:intergenic | 40.0% |
| !! | AATAGCATCGGTGTACATAC+GGG | + | chr1.3:1585725-1585744 | None:intergenic | 40.0% |
| !! | AGCTCTAAAACGGACAGAAA+TGG | - | chr1.3:1582911-1582930 | MS.gene90752:intron | 40.0% |
| !! | GACTAAACCGAGCTCTAAAA+CGG | - | chr1.3:1582901-1582920 | MS.gene90752:intron | 40.0% |
| !! | GAGGAAGTTTTGCTTTTGGA+AGG | - | chr1.3:1587031-1587050 | MS.gene90752:intron | 40.0% |
| !!! | GTTTTAGAGCTCGGTTTAGT+CGG | + | chr1.3:1582902-1582921 | None:intergenic | 40.0% |
| !!! | TTCTTTTTTTATGGTGGCCG+AGG | + | chr1.3:1583380-1583399 | None:intergenic | 40.0% |
| !!! | TTTCTGTCCGTTTTAGAGCT+CGG | + | chr1.3:1582911-1582930 | None:intergenic | 40.0% |
| AATAATGCTGCAACTAGCGG+TGG | + | chr1.3:1583012-1583031 | None:intergenic | 45.0% | |
| ACAGGATTATATGTACCGCG+TGG | - | chr1.3:1586784-1586803 | MS.gene90752:intron | 45.0% | |
| ACTGAGCATAGTTGCGCTTT+AGG | - | chr1.3:1587100-1587119 | MS.gene90752:CDS | 45.0% | |
| AGAAATGTTCTCCGCTCACT+AGG | + | chr1.3:1584747-1584766 | None:intergenic | 45.0% | |
| AGCAAAGAAAGGGTTAGGGT+TGG | + | chr1.3:1584059-1584078 | None:intergenic | 45.0% | |
| AGGTTGCTGTGAAATCAGAC+TGG | + | chr1.3:1584383-1584402 | None:intergenic | 45.0% | |
| ATTATATGTACCGCGTGGGA+TGG | - | chr1.3:1586789-1586808 | MS.gene90752:CDS | 45.0% | |
| ATTTGGTCTCAAGGTTGCTC+GGG | - | chr1.3:1584245-1584264 | MS.gene90752:intron | 45.0% | |
| CAATGTGAGCTTGACTCAGT+TGG | - | chr1.3:1583190-1583209 | MS.gene90752:intron | 45.0% | |
| CAGGATTATATGTACCGCGT+GGG | - | chr1.3:1586785-1586804 | MS.gene90752:CDS | 45.0% | |
| CATCTTTACCTTGTAGCGCA+AGG | + | chr1.3:1583953-1583972 | None:intergenic | 45.0% | |
| CATTACGGTTGTACCTTCAC+AGG | + | chr1.3:1585297-1585316 | None:intergenic | 45.0% | |
| CCTTGAATGCGTTCAAGTCT+GGG | - | chr1.3:1586592-1586611 | MS.gene90752:CDS | 45.0% | |
| CGTTGTAGTACAACCTTCTC+TGG | + | chr1.3:1588551-1588570 | None:intergenic | 45.0% | |
| CTTCACAAAGGTTTGAACCC+GGG | - | chr1.3:1588099-1588118 | MS.gene90752:intron | 45.0% | |
| CTTGAATGCGTTCAAGTCTG+GGG | - | chr1.3:1586593-1586612 | MS.gene90752:CDS | 45.0% | |
| GAAAACAGACCGAAACCGTA+CGG | - | chr1.3:1582982-1583001 | MS.gene90752:intron | 45.0% | |
| GCAAAGAAAGGGTTAGGGTT+GGG | + | chr1.3:1584058-1584077 | None:intergenic | 45.0% | |
| GCTGTCAAGATTGGGAATCA+TGG | + | chr1.3:1582796-1582815 | None:intergenic | 45.0% | |
| GGCTTATCTTCTGAATTGGG+CGG | - | chr1.3:1583866-1583885 | MS.gene90752:intron | 45.0% | |
| TACGAGTGATTCCTAGTGAG+CGG | - | chr1.3:1584733-1584752 | MS.gene90752:CDS | 45.0% | |
| TCTTTACCTTGTAGCGCAAG+GGG | + | chr1.3:1583951-1583970 | None:intergenic | 45.0% | |
| TGAATCGCCGCTCTTCATTT+GGG | + | chr1.3:1586847-1586866 | None:intergenic | 45.0% | |
| TGCAGTACTCTATCTGGGTT+TGG | + | chr1.3:1583717-1583736 | None:intergenic | 45.0% | |
| TTAAAGGAGTTGGAAGGTCC+CGG | + | chr1.3:1588120-1588139 | None:intergenic | 45.0% | |
| ! | GCTATTTGAAGCCAGTGACT+TGG | - | chr1.3:1584348-1584367 | MS.gene90752:intron | 45.0% |
| ! | GTACGGTTTCGGTCTGTTTT+CGG | + | chr1.3:1582983-1583002 | None:intergenic | 45.0% |
| ! | GTACTCTATCTGGGTTTGGT+TGG | + | chr1.3:1583713-1583732 | None:intergenic | 45.0% |
| ! | TATCTGGGTTTGGTTGGGTT+GGG | + | chr1.3:1583707-1583726 | None:intergenic | 45.0% |
| ! | TCCTTAGGTGGTTTTCTCCT+CGG | - | chr1.3:1585603-1585622 | MS.gene90752:intron | 45.0% |
| !! | TTAGTCGGTGTCGGTTGTTT+CGG | + | chr1.3:1582887-1582906 | None:intergenic | 45.0% |
| !! | TTATTATATTAATAAGAATT+AGG | + | chr1.3:1586546-1586565 | None:intergenic | 5.0% |
| !!! | ATATTTATATTCTTTTTTTA+TGG | + | chr1.3:1583326-1583345 | None:intergenic | 5.0% |
| AAACTAACGAGCTCACGGTG+GGG | + | chr1.3:1588173-1588192 | None:intergenic | 50.0% | |
| ACAAACTAACGAGCTCACGG+TGG | + | chr1.3:1588175-1588194 | None:intergenic | 50.0% | |
| ACCGAGGAGAAAACCACCTA+AGG | + | chr1.3:1585607-1585626 | None:intergenic | 50.0% | |
| ATTGGATCGGACGGTTTGCA+CGG | + | chr1.3:1582857-1582876 | None:intergenic | 50.0% | |
| CAAACTAACGAGCTCACGGT+GGG | + | chr1.3:1588174-1588193 | None:intergenic | 50.0% | |
| CCCAGACTTGAACGCATTCA+AGG | + | chr1.3:1586595-1586614 | None:intergenic | 50.0% | |
| CTGAATCGCCGCTCTTCATT+TGG | + | chr1.3:1586848-1586867 | None:intergenic | 50.0% | |
| GAATCCGTTTGGAAGAGTGG+AGG | - | chr1.3:1587394-1587413 | MS.gene90752:intron | 50.0% | |
| GAATCTGATTGGAAGCCCGA+AGG | - | chr1.3:1588518-1588537 | MS.gene90752:intron | 50.0% | |
| GCCTTGAATGCGTTCAAGTC+TGG | - | chr1.3:1586591-1586610 | MS.gene90752:CDS | 50.0% | |
| GGAATTTCCCAACCACGTTC+TGG | - | chr1.3:1583980-1583999 | MS.gene90752:intron | 50.0% | |
| TAAAGGAGTTGGAAGGTCCC+GGG | + | chr1.3:1588119-1588138 | None:intergenic | 50.0% | |
| TCCCAACGAAGTCGGTCTAA+AGG | - | chr1.3:1585895-1585914 | MS.gene90752:intron | 50.0% | |
| TGACGCACATCTGCTGTTGA+AGG | - | chr1.3:1584680-1584699 | MS.gene90752:CDS | 50.0% | |
| ! | AAGGTCTGAGGTTCGAACCT+CGG | - | chr1.3:1583360-1583379 | MS.gene90752:intron | 50.0% |
| ! | AGCCTTTAGACCGACTTCGT+TGG | + | chr1.3:1585900-1585919 | None:intergenic | 50.0% |
| ! | CTATCTGGGTTTGGTTGGGT+TGG | + | chr1.3:1583708-1583727 | None:intergenic | 50.0% |
| ! | GCCTTTAGACCGACTTCGTT+GGG | + | chr1.3:1585899-1585918 | None:intergenic | 50.0% |
| ! | GTCTTCTCTGCCTTTTGAGC+AGG | - | chr1.3:1584650-1584669 | MS.gene90752:CDS | 50.0% |
| ! | GTTGGGTCCAGCTTCTAAGA+GGG | + | chr1.3:1584041-1584060 | None:intergenic | 50.0% |
| ! | TAGGTGGTTTTCTCCTCGGT+TGG | - | chr1.3:1585607-1585626 | MS.gene90752:intron | 50.0% |
| ! | TTTGGAAGGGCGTGTTAGTG+AGG | - | chr1.3:1587045-1587064 | MS.gene90752:intron | 50.0% |
| !! | TAGTCGGTGTCGGTTGTTTC+GGG | + | chr1.3:1582886-1582905 | None:intergenic | 50.0% |
| !! | TTGGTTGGGTTGGGTCGAAT+CGG | + | chr1.3:1583698-1583717 | None:intergenic | 50.0% |
| !! | TTTCGGGTGACGGATTGGAT+CGG | + | chr1.3:1582870-1582889 | None:intergenic | 50.0% |
| AGCCTTGCCAGAACGTGGTT+GGG | + | chr1.3:1583990-1584009 | None:intergenic | 55.0% | |
| CTGATTCCCCTTGCGCTACA+AGG | - | chr1.3:1583942-1583961 | MS.gene90752:CDS | 55.0% | |
| GAATCGGATCGGACCCATGT+TGG | + | chr1.3:1583682-1583701 | None:intergenic | 55.0% | |
| GAGCTCGGTTTAGTCGGTGT+CGG | + | chr1.3:1582896-1582915 | None:intergenic | 55.0% | |
| GCTGTTGAAGGATCGCGTTC+AGG | - | chr1.3:1584692-1584711 | MS.gene90752:CDS | 55.0% | |
| GGTTGGGTCCAGCTTCTAAG+AGG | + | chr1.3:1584042-1584061 | None:intergenic | 55.0% | |
| TTCCCAACCACGTTCTGGCA+AGG | - | chr1.3:1583985-1584004 | MS.gene90752:intron | 55.0% | |
| TTGCAGGCCCTCTTAGAAGC+TGG | - | chr1.3:1584031-1584050 | MS.gene90752:intron | 55.0% | |
| ! | TGGGTTGGGTCGAATCGGAT+CGG | + | chr1.3:1583693-1583712 | None:intergenic | 55.0% |
| !! | GGTTGTTTCGGGTGACGGAT+TGG | + | chr1.3:1582875-1582894 | None:intergenic | 55.0% |
| !! | GTGTCGGTTGTTTCGGGTGA+CGG | + | chr1.3:1582880-1582899 | None:intergenic | 55.0% |
| AACGAGCTCACGGTGGGGTT+TGG | + | chr1.3:1588168-1588187 | None:intergenic | 60.0% | |
| ACTAGCGGTGGACGTCCGTA+CGG | + | chr1.3:1583000-1583019 | None:intergenic | 60.0% | |
| CAACCACGTTCTGGCAAGGC+TGG | - | chr1.3:1583989-1584008 | MS.gene90752:intron | 60.0% | |
| CAGCCTTGCCAGAACGTGGT+TGG | + | chr1.3:1583991-1584010 | None:intergenic | 60.0% | |
| CCTTGCTGCTGCAGTGTGTC+CGG | + | chr1.3:1585798-1585817 | None:intergenic | 60.0% | |
| CTGGAGCAATCCATCCCACG+CGG | + | chr1.3:1586802-1586821 | None:intergenic | 60.0% | |
| GGTGGACGTCCGTACGGTTT+CGG | + | chr1.3:1582994-1583013 | None:intergenic | 60.0% | |
| GGTGGTCAGAGTTCGAACCC+CGG | + | chr1.3:1583245-1583264 | None:intergenic | 60.0% | |
| !! | GGGTGACGGATTGGATCGGA+CGG | + | chr1.3:1582866-1582885 | None:intergenic | 60.0% |
| CCGGACACACTGCAGCAGCA+AGG | - | chr1.3:1585795-1585814 | MS.gene90752:intron | 65.0% | |
| GCTCCAGCCTTGCCAGAACG+TGG | + | chr1.3:1583995-1584014 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 1582776 | 1588583 | 1582776 | ID=MS.gene90752 |
| chr1.3 | mRNA | 1582776 | 1588583 | 1582776 | ID=MS.gene90752.t1;Parent=MS.gene90752 |
| chr1.3 | exon | 1588578 | 1588583 | 1588578 | ID=MS.gene90752.t1.exon1;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1588578 | 1588583 | 1588578 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| chr1.3 | exon | 1587261 | 1587322 | 1587261 | ID=MS.gene90752.t1.exon2;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1587261 | 1587322 | 1587261 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| chr1.3 | exon | 1587093 | 1587127 | 1587093 | ID=MS.gene90752.t1.exon3;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1587093 | 1587127 | 1587093 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| chr1.3 | exon | 1586785 | 1586864 | 1586785 | ID=MS.gene90752.t1.exon4;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1586785 | 1586864 | 1586785 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| chr1.3 | exon | 1586568 | 1586687 | 1586568 | ID=MS.gene90752.t1.exon5;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1586568 | 1586687 | 1586568 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| chr1.3 | exon | 1585517 | 1585591 | 1585517 | ID=MS.gene90752.t1.exon6;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1585517 | 1585591 | 1585517 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| chr1.3 | exon | 1584973 | 1585023 | 1584973 | ID=MS.gene90752.t1.exon7;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1584973 | 1585023 | 1584973 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| chr1.3 | exon | 1584646 | 1584783 | 1584646 | ID=MS.gene90752.t1.exon8;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1584646 | 1584783 | 1584646 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| chr1.3 | exon | 1584472 | 1584571 | 1584472 | ID=MS.gene90752.t1.exon9;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1584472 | 1584571 | 1584472 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| chr1.3 | exon | 1584272 | 1584360 | 1584272 | ID=MS.gene90752.t1.exon10;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1584272 | 1584360 | 1584272 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| chr1.3 | exon | 1583924 | 1583974 | 1583924 | ID=MS.gene90752.t1.exon11;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1583924 | 1583974 | 1583924 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| chr1.3 | exon | 1582776 | 1582826 | 1582776 | ID=MS.gene90752.t1.exon12;Parent=MS.gene90752.t1 |
| chr1.3 | CDS | 1582776 | 1582826 | 1582776 | ID=cds.MS.gene90752.t1;Parent=MS.gene90752.t1 |
| Gene Sequence |
| Protein sequence |
