AlfalfaGEDB | MS.gene90770

M. sativa cultivar XinJiangDaYe / MS.gene90770

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02701.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90770.t1	XP_003628883.1	97.3	339	7	2	1	338	1	338	1.10E-185	659.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90770.t1	Q9LSL6	37.0	338	173	12	4	338	16	316	2.8e-39	164.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90770.t1	G7LIJ3	97.3	339	7	2	1	338	1	338	8.2e-186	659.1

TFs/TRs:

Gene ID	Type	Classification
MS.gene90770.t1	TF	C2C2-Dof

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050398	MS.gene90770	0.803122	4.05E-49	-1.69E-46
MS.gene054010	MS.gene90770	0.803856	2.85E-49	-1.69E-46
MS.gene054011	MS.gene90770	0.807891	4.05E-50	-1.69E-46
MS.gene054012	MS.gene90770	0.810714	1.00E-50	-1.69E-46
MS.gene054013	MS.gene90770	0.808385	3.18E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90770.t1	MTR_8g068210	97.345	339	7	2	1	338	1	338	0.0	678
MS.gene90770.t1	MTR_5g031440	50.592	338	92	16	32	338	43	336	8.20e-77	239
MS.gene90770.t1	MTR_2g096740	51.181	127	50	4	12	127	40	165	3.02e-32	122
MS.gene90770.t1	MTR_2g096740	52.066	121	48	3	16	127	61	180	5.27e-32	122
MS.gene90770.t1	MTR_4g088580	68.493	73	23	0	33	105	56	128	1.08e-31	122
MS.gene90770.t1	MTR_8g479350	66.667	78	25	1	32	108	68	145	5.00e-31	120
MS.gene90770.t1	MTR_4g063780	77.273	66	12	1	31	93	74	139	1.30e-30	119
MS.gene90770.t1	MTR_7g024670	53.535	99	36	1	8	96	43	141	3.71e-30	118
MS.gene90770.t1	MTR_4g461080	43.529	170	74	6	28	187	25	182	1.31e-29	114
MS.gene90770.t1	MTR_3g091820	71.212	66	19	0	21	86	32	97	4.80e-29	114
MS.gene90770.t1	MTR_2g093220	66.234	77	23	1	13	86	18	94	4.91e-29	113
MS.gene90770.t1	MTR_8g027295	70.000	70	19	1	21	90	15	82	6.40e-29	112
MS.gene90770.t1	MTR_1g077600	71.212	66	19	0	21	86	32	97	8.47e-29	112
MS.gene90770.t1	MTR_1g077600	71.212	66	19	0	21	86	32	97	9.10e-29	112
MS.gene90770.t1	MTR_2g014060	75.806	62	15	0	22	83	15	76	1.76e-28	113
MS.gene90770.t1	MTR_3g077750	69.355	62	19	0	21	82	50	111	2.84e-28	112
MS.gene90770.t1	MTR_4g022370	74.138	58	15	0	29	86	79	136	2.85e-28	113
MS.gene90770.t1	MTR_3g090430	68.116	69	22	0	20	88	39	107	3.12e-28	112
MS.gene90770.t1	MTR_7g059400	72.881	59	16	0	28	86	72	130	9.93e-28	111
MS.gene90770.t1	MTR_1g056810	75.862	58	14	0	29	86	9	66	2.43e-27	108
MS.gene90770.t1	MTR_4g109980	82.692	52	9	0	31	82	39	90	2.56e-27	109
MS.gene90770.t1	MTR_2g014170	84.000	50	8	0	31	80	44	93	1.48e-26	107
MS.gene90770.t1	MTR_8g015840	69.492	59	18	0	28	86	16	74	3.68e-26	103
MS.gene90770.t1	MTR_2g059540	80.392	51	10	0	30	80	29	79	7.01e-26	103
MS.gene90770.t1	MTR_8g079060	72.727	55	15	0	32	86	29	83	1.35e-25	102
MS.gene90770.t1	MTR_2g013370	65.079	63	21	1	26	88	40	101	1.21e-24	101
MS.gene90770.t1	MTR_7g010950	57.692	78	32	1	7	83	109	186	1.38e-24	104
MS.gene90770.t1	MTR_4g082060	51.190	84	41	0	7	90	97	180	2.71e-24	103
MS.gene90770.t1	MTR_2g016030	53.846	78	36	0	32	109	47	124	4.56e-24	97.1
MS.gene90770.t1	MTR_7g086780	55.000	80	30	1	14	87	75	154	8.75e-24	101
MS.gene90770.t1	MTR_6g027460	57.534	73	25	1	21	87	79	151	9.28e-24	100
MS.gene90770.t1	MTR_4g089095	68.421	57	17	1	32	88	16	71	9.94e-24	98.6
MS.gene90770.t1	MTR_4g089095	68.421	57	17	1	32	88	50	105	1.05e-23	99.4
MS.gene90770.t1	MTR_6g027450	56.164	73	26	1	21	87	72	144	1.52e-23	99.4
MS.gene90770.t1	MTR_8g044220	46.914	81	43	0	6	86	92	172	8.32e-23	99.0
MS.gene90770.t1	MTR_6g012450	45.631	103	50	3	7	104	112	213	1.23e-22	98.6
MS.gene90770.t1	MTR_5g041530	56.757	74	31	1	14	87	122	194	1.46e-22	97.4
MS.gene90770.t1	MTR_3g435480	50.602	83	35	1	9	85	107	189	2.35e-22	97.8
MS.gene90770.t1	MTR_5g041420	55.714	70	31	0	14	83	120	189	1.89e-21	93.6
MS.gene90770.t1	MTR_5g041380	46.914	81	35	1	13	85	100	180	5.87e-19	87.0
MS.gene90770.t1	MTR_5g041400	46.067	89	38	2	5	85	86	172	7.97e-19	86.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90770.t1	AT5G65590	37.571	354	149	14	4	338	16	316	4.42e-57	187
MS.gene90770.t1	AT5G60200	47.899	119	52	2	14	122	35	153	1.08e-31	120
MS.gene90770.t1	AT1G51700	59.756	82	32	1	28	109	29	109	3.85e-31	116
MS.gene90770.t1	AT2G37590	76.667	60	14	0	29	88	86	145	1.36e-30	119
MS.gene90770.t1	AT2G28810	58.242	91	27	2	4	83	38	128	1.22e-29	115
MS.gene90770.t1	AT5G60850	60.000	80	32	0	31	110	50	129	1.31e-29	115
MS.gene90770.t1	AT3G45610	60.759	79	30	1	8	86	17	94	1.54e-29	114
MS.gene90770.t1	AT2G28810	58.242	91	27	2	4	83	55	145	1.64e-29	116
MS.gene90770.t1	AT3G52440	59.551	89	29	1	29	110	22	110	2.53e-29	113
MS.gene90770.t1	AT3G55370	68.116	69	22	0	29	97	73	141	2.58e-29	115
MS.gene90770.t1	AT1G07640	81.818	55	10	0	32	86	21	75	2.80e-29	114
MS.gene90770.t1	AT3G55370	68.116	69	22	0	29	97	73	141	3.42e-29	115
MS.gene90770.t1	AT3G55370	68.116	69	22	0	29	97	118	186	3.67e-29	115
MS.gene90770.t1	AT1G07640	81.818	55	10	0	32	86	77	131	3.81e-29	114
MS.gene90770.t1	AT2G28510	54.000	100	41	1	31	130	47	141	4.84e-29	113
MS.gene90770.t1	AT3G52440	59.551	89	29	1	29	110	41	129	4.85e-29	113
MS.gene90770.t1	AT1G07640	81.818	55	10	0	32	86	85	139	5.06e-29	114
MS.gene90770.t1	AT3G21270	84.615	52	8	0	32	83	29	80	7.95e-29	110
MS.gene90770.t1	AT5G02460	75.862	58	14	0	29	86	92	149	1.70e-28	114
MS.gene90770.t1	AT4G24060	57.778	90	38	0	21	110	42	131	2.66e-28	112
MS.gene90770.t1	AT5G66940	46.512	129	49	5	25	153	26	134	3.69e-28	109
MS.gene90770.t1	AT1G21340	70.968	62	18	0	30	91	36	97	7.99e-28	109
MS.gene90770.t1	AT3G50410	71.429	63	17	1	24	86	23	84	1.05e-27	109
MS.gene90770.t1	AT1G28310	75.439	57	14	0	32	88	27	83	2.35e-27	109
MS.gene90770.t1	AT4G38000	78.571	56	12	0	31	86	40	95	2.77e-27	107
MS.gene90770.t1	AT3G61850	69.863	73	18	2	21	93	52	120	3.14e-27	108
MS.gene90770.t1	AT3G61850	69.863	73	18	2	21	93	52	120	3.14e-27	108
MS.gene90770.t1	AT1G28310	75.439	57	14	0	32	88	51	107	3.38e-27	109
MS.gene90770.t1	AT3G61850	67.105	76	21	2	18	93	61	132	4.08e-27	108
MS.gene90770.t1	AT4G21050	74.545	55	14	0	34	88	26	80	4.65e-27	106
MS.gene90770.t1	AT3G61850	67.105	76	21	2	18	93	49	120	5.04e-27	108
MS.gene90770.t1	AT3G61850	67.105	76	21	2	18	93	61	132	6.27e-27	108
MS.gene90770.t1	AT5G62940	82.000	50	9	0	33	82	74	123	5.57e-26	107
MS.gene90770.t1	AT4G00940	66.667	66	22	0	22	87	58	123	6.49e-26	105
MS.gene90770.t1	AT4G00940	66.667	66	22	0	22	87	58	123	6.49e-26	105
MS.gene90770.t1	AT4G00940	66.667	66	22	0	22	87	58	123	6.49e-26	105
MS.gene90770.t1	AT1G64620	70.492	61	18	0	21	81	38	98	1.60e-25	105
MS.gene90770.t1	AT2G46590	73.333	60	14	1	20	79	58	115	9.88e-25	103
MS.gene90770.t1	AT2G46590	73.333	60	14	1	20	79	70	127	1.11e-24	103
MS.gene90770.t1	AT4G21040	64.062	64	23	0	34	97	27	90	1.71e-23	97.4
MS.gene90770.t1	AT5G62430	41.818	110	64	0	2	111	24	133	4.44e-23	97.8
MS.gene90770.t1	AT2G34140	57.143	70	28	1	18	85	42	111	9.52e-23	93.6
MS.gene90770.t1	AT3G47500	54.930	71	32	0	13	83	91	161	1.77e-22	98.2
MS.gene90770.t1	AT5G39660	53.086	81	35	2	7	85	112	191	4.03e-22	97.1
MS.gene90770.t1	AT5G39660	53.086	81	35	2	7	85	112	191	4.03e-22	97.1
MS.gene90770.t1	AT5G39660	53.086	81	35	2	7	85	112	191	4.03e-22	97.1
MS.gene90770.t1	AT4G21080	73.077	52	14	0	34	85	27	78	4.77e-22	94.0
MS.gene90770.t1	AT1G26790	57.143	70	28	1	18	85	95	164	5.27e-22	95.9
MS.gene90770.t1	AT1G29160	66.667	54	18	0	32	85	62	115	5.45e-22	91.7
MS.gene90770.t1	AT1G47655	71.429	49	14	0	32	80	29	77	8.31e-22	92.0
MS.gene90770.t1	AT1G69570	66.667	54	18	0	32	85	132	185	1.04e-21	95.5
MS.gene90770.t1	AT4G21030	51.515	66	29	2	34	97	23	87	3.91e-13	67.8

Find 53 sgRNAs with CRISPR-Local

Find 64 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATCTTAGTGTTTGCATTAA+TGG	0.144786	8.1:-36679132	MS.gene90770:CDS
AATGGAGGTGGATTTATTAA+TGG	0.224509	8.1:-36679528	MS.gene90770:CDS
GAAAATTGGTTATAGTAAAA+TGG	0.242887	8.1:+36679657	None:intergenic
GGATATAAATTTAAACCATT+TGG	0.271968	8.1:+36679564	None:intergenic
CTCCACCAATGGAAGAAAAT+TGG	0.291159	8.1:+36679643	None:intergenic
TGAAGAAGAGTACTTATTAA+TGG	0.299609	8.1:+36679743	None:intergenic
GAATTCTTATTCATCTGTTA+TGG	0.312133	8.1:-36679172	MS.gene90770:CDS
TCAAGATTCTGAAACAAAAT+AGG	0.312862	8.1:+36679279	None:intergenic
GCAAAACATGCAGAAGATAT+TGG	0.321728	8.1:-36679854	MS.gene90770:CDS
CTTTAGGGCAAAGCAGTATA+TGG	0.322395	8.1:+36679033	None:intergenic
GAAGAGAAGGGTAATGATAA+AGG	0.339449	8.1:+36679684	None:intergenic
AATGGTGATCATGATCAAAA+TGG	0.343971	8.1:-36679114	MS.gene90770:CDS
ATCAAAATGGTAACAACAAT+TGG	0.348472	8.1:-36679101	MS.gene90770:CDS
GTATTGAATCATTGAGTTGT+AGG	0.351509	8.1:-36679419	MS.gene90770:CDS
AACAACAATTGGATTAATAA+TGG	0.366146	8.1:-36679090	MS.gene90770:CDS
GGTGCAAGTGAATGGTTCTT+TGG	0.371222	8.1:-36679198	MS.gene90770:CDS
GAAGCTTCAAATGCAAATCT+TGG	0.372018	8.1:+36679394	None:intergenic
TTCTCTTCTTCAAATGGAGG+TGG	0.376995	8.1:-36679540	MS.gene90770:CDS
CCTTGTTTGAAGATAATAAC+AGG	0.384597	8.1:-36679353	MS.gene90770:CDS
TAATAATGGTGTTCATGCTT+GGG	0.391047	8.1:-36679076	MS.gene90770:CDS
TATCCTTTCTCTTCTTCAAA+TGG	0.391979	8.1:-36679546	MS.gene90770:CDS
AATTTAAACCATTTGGATCA+AGG	0.394686	8.1:+36679571	None:intergenic
TTTCAAGTTGGTGGTGGTGC+TGG	0.445544	8.1:-36679237	MS.gene90770:CDS
GAAGGGTAATGATAAAGGTA+AGG	0.450658	8.1:+36679689	None:intergenic
TGCAGAAGATATTGGACAAA+TGG	0.451403	8.1:-36679846	MS.gene90770:CDS
CTAAGATCAGTAGTTGTTGC+AGG	0.461438	8.1:+36679147	None:intergenic
TTAATAATGGTGTTCATGCT+TGG	0.476692	8.1:-36679077	MS.gene90770:CDS
TTTCTGAAGAAGAACCTTGT+TGG	0.485232	8.1:+36679988	None:intergenic
GGAAATGAAAATGCAATTCA+AGG	0.492654	8.1:-36679504	MS.gene90770:CDS
GAAAAGAAGGTGCAAGTGAA+TGG	0.503466	8.1:-36679206	MS.gene90770:CDS
GTGTTTGGAGAATCACATCT+TGG	0.505256	8.1:+36679927	None:intergenic
GGAGGTGGATTTATTAATGG+TGG	0.512038	8.1:-36679525	MS.gene90770:CDS
TTGCGTAACGTTCCGATAGG+TGG	0.519722	8.1:-36679816	MS.gene90770:CDS
TTCTGAAACAAAATAGGTTG+AGG	0.522960	8.1:+36679285	None:intergenic
CCTTTCTCTTCTTCAAATGG+AGG	0.533783	8.1:-36679543	MS.gene90770:CDS
TCAGAATCTTGAGATTTCAA+AGG	0.543309	8.1:-36679268	MS.gene90770:CDS
CCTCCATTTGAAGAAGAGAA+AGG	0.544548	8.1:+36679543	None:intergenic
GCTGAGATGTTTCAAGTTGG+TGG	0.546166	8.1:-36679246	MS.gene90770:CDS
GATAATAACAGGAAAGAGAG+TGG	0.551054	8.1:-36679342	MS.gene90770:CDS
CGTAACGTTCCGATAGGTGG+TGG	0.551463	8.1:-36679813	MS.gene90770:CDS
CCTGTTATTATCTTCAAACA+AGG	0.552716	8.1:+36679353	None:intergenic
TTTCTGCAACCACCACCTAT+CGG	0.561402	8.1:+36679804	None:intergenic
GAGATGTTTCAAGTTGGTGG+TGG	0.563036	8.1:-36679243	MS.gene90770:CDS
AAGGGTAATGATAAAGGTAA+GGG	0.574636	8.1:+36679690	None:intergenic
TACTTATTAATGGCTTGAGA+TGG	0.577342	8.1:+36679753	None:intergenic
TGAACTTGAAACTCCACCAA+TGG	0.581179	8.1:+36679632	None:intergenic
AAGGCTGAGATGTTTCAAGT+TGG	0.583200	8.1:-36679249	MS.gene90770:CDS
CCAAGATGAAAATCAAGTGA+AGG	0.600819	8.1:+36679720	None:intergenic
AATAATGGTGTTCATGCTTG+GGG	0.619834	8.1:-36679075	MS.gene90770:CDS
GCTGGTGATTCAAGAAAAGA+AGG	0.622592	8.1:-36679219	MS.gene90770:CDS
TCGTTGCGTAACGTTCCGAT+AGG	0.633139	8.1:-36679819	MS.gene90770:CDS
AGAAGATATTGGACAAATGG+TGG	0.635966	8.1:-36679843	MS.gene90770:CDS
CAAGATCATGAAAACCAACA+AGG	0.656147	8.1:-36680002	MS.gene90770:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AACAACAATTGGATTAATAA+TGG	-	chr8.1:36679974-36679993	MS.gene90770:CDS	20.0%
!!	GAAAATTGGTTATAGTAAAA+TGG	+	chr8.1:36679410-36679429	None:intergenic	20.0%
!!	GGATATAAATTTAAACCATT+TGG	+	chr8.1:36679503-36679522	None:intergenic	20.0%
!	AATTTAAACCATTTGGATCA+AGG	+	chr8.1:36679496-36679515	None:intergenic	25.0%
!	ATCAAAATGGTAACAACAAT+TGG	-	chr8.1:36679963-36679982	MS.gene90770:CDS	25.0%
!	GAATTCTTATTCATCTGTTA+TGG	-	chr8.1:36679892-36679911	MS.gene90770:CDS	25.0%
!!	TATAACCAATTTTCTTCCAT+TGG	-	chr8.1:36679416-36679435	MS.gene90770:CDS	25.0%
!!	TTTTTGTTGATCTGTTATCT+TGG	+	chr8.1:36679102-36679121	None:intergenic	25.0%
!!!	TAAAATGGTTTTGAAGAGAA+GGG	+	chr8.1:36679395-36679414	None:intergenic	25.0%
!!!	TCAAGATTCTGAAACAAAAT+AGG	+	chr8.1:36679788-36679807	None:intergenic	25.0%
!!!	TGAAGAAGAGTACTTATTAA+TGG	+	chr8.1:36679324-36679343	None:intergenic	25.0%
	AAGGGTAATGATAAAGGTAA+GGG	+	chr8.1:36679377-36679396	None:intergenic	30.0%
	AATGGTGATCATGATCAAAA+TGG	-	chr8.1:36679950-36679969	MS.gene90770:CDS	30.0%
	CCTGTTATTATCTTCAAACA+AGG	+	chr8.1:36679714-36679733	None:intergenic	30.0%
	GATCTTAGTGTTTGCATTAA+TGG	-	chr8.1:36679932-36679951	MS.gene90770:CDS	30.0%
	GGAAATGAAAATGCAATTCA+AGG	-	chr8.1:36679560-36679579	MS.gene90770:CDS	30.0%
	TAATAATGGTGTTCATGCTT+GGG	-	chr8.1:36679988-36680007	MS.gene90770:CDS	30.0%
	TACTTATTAATGGCTTGAGA+TGG	+	chr8.1:36679314-36679333	None:intergenic	30.0%
	TATCCTTTCTCTTCTTCAAA+TGG	-	chr8.1:36679518-36679537	MS.gene90770:CDS	30.0%
	TCAGAATCTTGAGATTTCAA+AGG	-	chr8.1:36679796-36679815	MS.gene90770:CDS	30.0%
	TTAATAATGGTGTTCATGCT+TGG	-	chr8.1:36679987-36680006	MS.gene90770:CDS	30.0%
!	AATGGAGGTGGATTTATTAA+TGG	-	chr8.1:36679536-36679555	MS.gene90770:CDS	30.0%
!	CCTTGTTTGAAGATAATAAC+AGG	-	chr8.1:36679711-36679730	MS.gene90770:CDS	30.0%
!	GTATTGAATCATTGAGTTGT+AGG	-	chr8.1:36679645-36679664	MS.gene90770:CDS	30.0%
!	TAGTAGCAGAATTTTGTGTT+TGG	+	chr8.1:36679155-36679174	None:intergenic	30.0%
!!	TTCTGAAACAAAATAGGTTG+AGG	+	chr8.1:36679782-36679801	None:intergenic	30.0%
!!!	GTAAAATGGTTTTGAAGAGA+AGG	+	chr8.1:36679396-36679415	None:intergenic	30.0%
	AATAATGGTGTTCATGCTTG+GGG	-	chr8.1:36679989-36680008	MS.gene90770:CDS	35.0%
	AGAAGATATTGGACAAATGG+TGG	-	chr8.1:36679221-36679240	MS.gene90770:CDS	35.0%
	CAAGATCATGAAAACCAACA+AGG	-	chr8.1:36679062-36679081	MS.gene90770:CDS	35.0%
	CCAAGATGAAAATCAAGTGA+AGG	+	chr8.1:36679347-36679366	None:intergenic	35.0%
	GAAGAGAAGGGTAATGATAA+AGG	+	chr8.1:36679383-36679402	None:intergenic	35.0%
	GAAGCTTCAAATGCAAATCT+TGG	+	chr8.1:36679673-36679692	None:intergenic	35.0%
	GAAGGGTAATGATAAAGGTA+AGG	+	chr8.1:36679378-36679397	None:intergenic	35.0%
	GATAATAACAGGAAAGAGAG+TGG	-	chr8.1:36679722-36679741	MS.gene90770:CDS	35.0%
	GCAAAACATGCAGAAGATAT+TGG	-	chr8.1:36679210-36679229	MS.gene90770:CDS	35.0%
	TGCAGAAGATATTGGACAAA+TGG	-	chr8.1:36679218-36679237	MS.gene90770:CDS	35.0%
!	AACCAATTTTCTTCCATTGG+TGG	-	chr8.1:36679419-36679438	MS.gene90770:CDS	35.0%
!	AGTTTTCACCTTGATCCAAA+TGG	-	chr8.1:36679485-36679504	MS.gene90770:CDS	35.0%
!	CATGTTTTGCAGAAATGTCT+TGG	+	chr8.1:36679200-36679219	None:intergenic	35.0%
!	CCTTCACTTGATTTTCATCT+TGG	-	chr8.1:36679344-36679363	MS.gene90770:CDS	35.0%
!	TTTCTGAAGAAGAACCTTGT+TGG	+	chr8.1:36679079-36679098	None:intergenic	35.0%
!!	TTGGTTTTCATGATCTTGTG+TGG	+	chr8.1:36679060-36679079	None:intergenic	35.0%
!!!	TCTTGTGTGGTTTTGTGATT+TGG	+	chr8.1:36679047-36679066	None:intergenic	35.0%
	CCTCCATTTGAAGAAGAGAA+AGG	+	chr8.1:36679524-36679543	None:intergenic	40.0%
	CCTTTCTCTTCTTCAAATGG+AGG	-	chr8.1:36679521-36679540	MS.gene90770:CDS	40.0%
	CTAAGATCAGTAGTTGTTGC+AGG	+	chr8.1:36679920-36679939	None:intergenic	40.0%
	CTCCACCAATGGAAGAAAAT+TGG	+	chr8.1:36679424-36679443	None:intergenic	40.0%
	GCTGGTGATTCAAGAAAAGA+AGG	-	chr8.1:36679845-36679864	MS.gene90770:CDS	40.0%
	GTGTTTGGAGAATCACATCT+TGG	+	chr8.1:36679140-36679159	None:intergenic	40.0%
	TGAACTTGAAACTCCACCAA+TGG	+	chr8.1:36679435-36679454	None:intergenic	40.0%
	TTCTCTTCTTCAAATGGAGG+TGG	-	chr8.1:36679524-36679543	MS.gene90770:CDS	40.0%
!	AAGGCTGAGATGTTTCAAGT+TGG	-	chr8.1:36679815-36679834	MS.gene90770:CDS	40.0%
!	GAAAAGAAGGTGCAAGTGAA+TGG	-	chr8.1:36679858-36679877	MS.gene90770:CDS	40.0%
!	GGAGGTGGATTTATTAATGG+TGG	-	chr8.1:36679539-36679558	MS.gene90770:CDS	40.0%
!	TGGAACTGTTTTGCTTTCTC+AGG	-	chr8.1:36679742-36679761	MS.gene90770:CDS	40.0%
	GGTGCAAGTGAATGGTTCTT+TGG	-	chr8.1:36679866-36679885	MS.gene90770:CDS	45.0%
	TTTCTGCAACCACCACCTAT+CGG	+	chr8.1:36679263-36679282	None:intergenic	45.0%
!!	GAGATGTTTCAAGTTGGTGG+TGG	-	chr8.1:36679821-36679840	MS.gene90770:CDS	45.0%
!!	GCTGAGATGTTTCAAGTTGG+TGG	-	chr8.1:36679818-36679837	MS.gene90770:CDS	45.0%
	TCGTTGCGTAACGTTCCGAT+AGG	-	chr8.1:36679245-36679264	MS.gene90770:CDS	50.0%
	TTGCGTAACGTTCCGATAGG+TGG	-	chr8.1:36679248-36679267	MS.gene90770:CDS	50.0%
!!	TTTCAAGTTGGTGGTGGTGC+TGG	-	chr8.1:36679827-36679846	MS.gene90770:CDS	50.0%
	CGTAACGTTCCGATAGGTGG+TGG	-	chr8.1:36679251-36679270	MS.gene90770:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	36679035	36680051	36679035	ID=MS.gene90770
chr8.1	mRNA	36679035	36680051	36679035	ID=MS.gene90770.t1;Parent=MS.gene90770
chr8.1	exon	36679035	36680051	36679035	ID=MS.gene90770.t1.exon1;Parent=MS.gene90770.t1
chr8.1	CDS	36679035	36680051	36679035	ID=cds.MS.gene90770.t1;Parent=MS.gene90770.t1

Gene Sequence

>MS.gene90770

ATGGTGGCACCAAATCACAAAACCACACAAGATCATGAAAACCAACAAGGTTCTTCTTCAGAAACCAAGATAACAGATCAACAAAAAGTTGCAGTAAAATGTCCAAGATGTGATTCTCCAAACACAAAATTCTGCTACTACAACAACTACAGTCTCACTCAACCAAGACATTTCTGCAAAACATGCAGAAGATATTGGACAAATGGTGGATCGTTGCGTAACGTTCCGATAGGTGGTGGTTGCAGAAAGAAACAAAAACTCAAACACTCATCTACACCATCTCAAGCCATTAATAAGTACTCTTCTTCACCTTCACTTGATTTTCATCTTGGTTCTTTACCCTTACCTTTATCATTACCCTTCTCTTCAAAACCATTTTACTATAACCAATTTTCTTCCATTGGTGGAGTTTCAAGTTCAAACACTTGTGTTTCTACTACAAGTGCTTCAAGTTTTCACCTTGATCCAAATGGTTTAAATTTATATCCTTTCTCTTCTTCAAATGGAGGTGGATTTATTAATGGTGGAAATGAAAATGCAATTCAAGGAATGAACTTTATGAATGTGAGTACTAGTGCTAATAATGCTAATTGCACTAGTCTTGCTTCTAGTATTGAATCATTGAGTTGTAGGAACCAAGATTTGCATTTGAAGCTTCAGCAGCAGAGATTAGCAACCTTGTTTGAAGATAATAACAGGAAAGAGAGTGGAACTGTTTTGCTTTCTCAGGTTAGCATTGAAAAGCCTCAACCTATTTTGTTTCAGAATCTTGAGATTTCAAAGGCTGAGATGTTTCAAGTTGGTGGTGGTGCTGGTGATTCAAGAAAAGAAGGTGCAAGTGAATGGTTCTTTGGTATGAATTCTTATTCATCTGTTATGGCTCCTGCAACAACTACTGATCTTAGTGTTTGCATTAATGGTGATCATGATCAAAATGGTAACAACAATTGGATTAATAATGGTGTTCATGCTTGGGGTGATGTGCAGCAGCAGCAACCATATACTGCTTTGCCCTAA

Protein sequence

>MS.gene90770.t1

MVAPNHKTTQDHENQQGSSSETKITDQQKVAVKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTNGGSLRNVPIGGGCRKKQKLKHSSTPSQAINKYSSSPSLDFHLGSLPLPLSLPFSSKPFYYNQFSSIGGVSSSNTCVSTTSASSFHLDPNGLNLYPFSSSNGGGFINGGNENAIQGMNFMNVSTSANNANCTSLASSIESLSCRNQDLHLKLQQQRLATLFEDNNRKESGTVLLSQVSIEKPQPILFQNLEISKAEMFQVGGGAGDSRKEGASEWFFGMNSYSSVMAPATTTDLSVCINGDHDQNGNNNWINNGVHAWGDVQQQQPYTALP