AlfalfaGEDB | MS.gene90771

M. sativa cultivar XinJiangDaYe / MS.gene90771

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02701.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90771.t1	XP_003628883.1	64.9	339	5	2	1	226	1	338	1.20E-109	406

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90771.t1	Q9LSL6	32.1	330	88	11	4	226	16	316	2.7e-30	133.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90771.t1	G7LIJ3	64.9	339	5	2	1	226	1	338	8.3e-110	406.0

TFs/TRs:

Gene ID	Type	Classification
MS.gene90771.t1	TF	C2C2-Dof

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050398	MS.gene90771	0.80333	3.67E-49	-1.69E-46
MS.gene054011	MS.gene90771	0.801602	8.33E-49	-1.69E-46
MS.gene054012	MS.gene90771	0.804984	1.66E-49	-1.69E-46
MS.gene054013	MS.gene90771	0.802389	5.74E-49	-1.69E-46
MS.gene057754	MS.gene90771	0.805197	1.50E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90771.t1	MTR_8g068210	96.875	128	3	1	99	226	212	338	5.63e-86	258
MS.gene90771.t1	MTR_8g068210	90.000	110	6	1	1	105	1	110	5.75e-68	212
MS.gene90771.t1	MTR_2g096740	61.176	85	30	1	21	102	51	135	9.79e-33	120
MS.gene90771.t1	MTR_2g096740	61.176	85	30	1	21	102	66	150	1.02e-32	120
MS.gene90771.t1	MTR_5g031440	94.118	51	3	0	32	82	43	93	2.54e-32	120
MS.gene90771.t1	MTR_5g031440	46.617	133	42	8	100	226	227	336	1.82e-20	88.2
MS.gene90771.t1	MTR_7g024670	50.450	111	44	2	8	107	43	153	5.65e-32	120
MS.gene90771.t1	MTR_4g063780	77.273	66	12	1	31	93	74	139	1.36e-31	118
MS.gene90771.t1	MTR_8g479350	72.464	69	18	1	32	99	68	136	3.50e-31	117
MS.gene90771.t1	MTR_4g088580	76.190	63	12	1	33	92	56	118	8.12e-31	117
MS.gene90771.t1	MTR_3g077750	36.239	218	100	8	21	216	50	250	9.38e-31	115
MS.gene90771.t1	MTR_8g027295	62.353	85	29	2	21	104	15	97	1.61e-30	114
MS.gene90771.t1	MTR_4g461080	82.143	56	10	0	28	83	25	80	5.73e-30	112
MS.gene90771.t1	MTR_3g091820	71.212	66	19	0	21	86	32	97	5.96e-30	113
MS.gene90771.t1	MTR_2g093220	66.234	77	23	1	13	86	18	94	5.96e-30	113
MS.gene90771.t1	MTR_1g077600	71.212	66	19	0	21	86	32	97	1.20e-29	111
MS.gene90771.t1	MTR_1g077600	71.212	66	19	0	21	86	32	97	1.33e-29	112
MS.gene90771.t1	MTR_2g014060	75.806	62	15	0	22	83	15	76	2.01e-29	112
MS.gene90771.t1	MTR_3g090430	68.116	69	22	0	20	88	39	107	2.71e-29	112
MS.gene90771.t1	MTR_4g022370	74.138	58	15	0	29	86	79	136	3.23e-29	112
MS.gene90771.t1	MTR_7g059400	72.881	59	16	0	28	86	72	130	1.44e-28	110
MS.gene90771.t1	MTR_1g056810	75.862	58	14	0	29	86	9	66	1.79e-28	108
MS.gene90771.t1	MTR_4g109980	82.692	52	9	0	31	82	39	90	3.34e-28	108
MS.gene90771.t1	MTR_2g014170	84.000	50	8	0	31	80	44	93	1.51e-27	107
MS.gene90771.t1	MTR_8g015840	70.000	60	18	0	32	91	20	79	4.84e-27	103
MS.gene90771.t1	MTR_2g059540	80.392	51	10	0	30	80	29	79	6.40e-27	102
MS.gene90771.t1	MTR_8g079060	55.556	81	32	1	32	108	29	109	1.40e-26	102
MS.gene90771.t1	MTR_7g010950	49.057	106	50	3	7	108	109	214	2.75e-25	103
MS.gene90771.t1	MTR_2g013370	65.079	63	21	1	26	88	40	101	2.82e-25	100
MS.gene90771.t1	MTR_4g082060	51.190	84	41	0	7	90	97	180	4.15e-25	102
MS.gene90771.t1	MTR_6g027460	57.534	73	25	1	21	87	79	151	1.65e-24	99.8
MS.gene90771.t1	MTR_7g086780	55.000	80	30	1	14	87	75	154	1.88e-24	100
MS.gene90771.t1	MTR_4g089095	68.421	57	17	1	32	88	50	105	2.08e-24	98.6
MS.gene90771.t1	MTR_4g089095	68.421	57	17	1	32	88	16	71	2.12e-24	97.8
MS.gene90771.t1	MTR_6g027450	56.164	73	26	1	21	87	72	144	3.41e-24	98.6
MS.gene90771.t1	MTR_2g016030	60.317	63	25	0	32	94	47	109	7.20e-24	93.6
MS.gene90771.t1	MTR_8g044220	46.914	81	43	0	6	86	92	172	2.44e-23	97.4
MS.gene90771.t1	MTR_5g041530	56.757	74	31	1	14	87	122	194	4.02e-23	96.3
MS.gene90771.t1	MTR_3g435480	50.602	83	35	1	9	85	107	189	4.21e-23	97.1
MS.gene90771.t1	MTR_6g012450	51.899	79	37	1	7	85	112	189	9.58e-23	95.9
MS.gene90771.t1	MTR_5g041420	53.247	77	35	1	14	90	120	195	6.32e-22	92.0
MS.gene90771.t1	MTR_5g041400	44.444	99	45	2	5	95	86	182	8.59e-20	86.7
MS.gene90771.t1	MTR_5g041380	42.000	100	43	2	7	92	88	186	1.20e-19	86.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90771.t1	AT1G51700	44.966	149	66	5	32	175	33	170	2.55e-34	121
MS.gene90771.t1	AT5G65590	60.000	95	32	3	4	98	16	104	4.58e-33	121
MS.gene90771.t1	AT5G65590	37.795	127	53	6	100	226	216	316	2.88e-14	70.9
MS.gene90771.t1	AT5G60200	61.446	83	30	1	14	94	35	117	2.32e-32	118
MS.gene90771.t1	AT2G37590	76.667	60	14	0	29	88	86	145	1.74e-31	117
MS.gene90771.t1	AT4G38000	37.566	189	60	4	31	165	40	224	1.04e-30	114
MS.gene90771.t1	AT2G28810	58.242	91	27	2	4	83	38	128	1.19e-30	115
MS.gene90771.t1	AT2G28810	58.242	91	27	2	4	83	55	145	1.55e-30	115
MS.gene90771.t1	AT3G45610	60.759	79	30	1	8	86	17	94	1.65e-30	113
MS.gene90771.t1	AT3G55370	74.603	63	16	0	29	91	73	135	2.38e-30	114
MS.gene90771.t1	AT1G07640	81.818	55	10	0	32	86	21	75	2.61e-30	113
MS.gene90771.t1	AT3G55370	74.603	63	16	0	29	91	73	135	2.76e-30	115
MS.gene90771.t1	AT2G28510	59.524	84	34	0	31	114	47	130	3.48e-30	113
MS.gene90771.t1	AT3G55370	68.116	69	22	0	29	97	118	186	3.58e-30	115
MS.gene90771.t1	AT5G60850	69.697	66	20	0	31	96	50	115	3.73e-30	114
MS.gene90771.t1	AT1G07640	81.818	55	10	0	32	86	77	131	3.76e-30	114
MS.gene90771.t1	AT3G52440	74.603	63	16	0	29	91	22	84	4.07e-30	112
MS.gene90771.t1	AT1G07640	81.818	55	10	0	32	86	85	139	5.00e-30	114
MS.gene90771.t1	AT3G52440	74.603	63	16	0	29	91	41	103	5.63e-30	112
MS.gene90771.t1	AT3G21270	84.615	52	8	0	32	83	29	80	6.65e-30	110
MS.gene90771.t1	AT5G02460	75.862	58	14	0	29	86	92	149	1.85e-29	113
MS.gene90771.t1	AT1G21340	63.889	72	26	0	30	101	36	107	2.49e-29	110
MS.gene90771.t1	AT3G50410	71.429	63	17	1	24	86	23	84	1.60e-28	108
MS.gene90771.t1	AT4G24060	69.697	66	20	0	21	86	42	107	1.91e-28	110
MS.gene90771.t1	AT1G28310	75.439	57	14	0	32	88	27	83	2.58e-28	108
MS.gene90771.t1	AT3G61850	77.419	62	11	1	32	93	62	120	3.39e-28	108
MS.gene90771.t1	AT3G61850	77.419	62	11	1	32	93	62	120	3.39e-28	108
MS.gene90771.t1	AT3G61850	77.419	62	11	1	32	93	74	132	3.76e-28	108
MS.gene90771.t1	AT1G28310	75.439	57	14	0	32	88	51	107	3.92e-28	108
MS.gene90771.t1	AT4G21050	74.545	55	14	0	34	88	26	80	4.51e-28	106
MS.gene90771.t1	AT3G61850	77.419	62	11	1	32	93	62	120	5.40e-28	108
MS.gene90771.t1	AT3G61850	77.419	62	11	1	32	93	74	132	6.30e-28	108
MS.gene90771.t1	AT5G66940	53.571	84	36	2	25	106	26	108	1.72e-27	105
MS.gene90771.t1	AT4G00940	66.667	66	22	0	22	87	58	123	4.45e-27	105
MS.gene90771.t1	AT4G00940	66.667	66	22	0	22	87	58	123	4.45e-27	105
MS.gene90771.t1	AT4G00940	66.667	66	22	0	22	87	58	123	4.45e-27	105
MS.gene90771.t1	AT5G62940	82.000	50	9	0	33	82	74	123	6.98e-27	106
MS.gene90771.t1	AT1G64620	70.492	61	18	0	21	81	38	98	2.09e-26	104
MS.gene90771.t1	AT2G46590	73.333	60	14	1	20	79	58	115	1.33e-25	102
MS.gene90771.t1	AT2G46590	73.333	60	14	1	20	79	70	127	1.40e-25	102
MS.gene90771.t1	AT4G21040	64.062	64	23	0	34	97	27	90	2.69e-24	96.7
MS.gene90771.t1	AT2G34140	51.220	82	38	1	6	85	30	111	8.42e-24	94.0
MS.gene90771.t1	AT3G47500	40.000	130	70	3	13	141	91	213	3.17e-23	97.1
MS.gene90771.t1	AT4G21080	73.077	52	14	0	34	85	27	78	6.65e-23	93.6
MS.gene90771.t1	AT5G39660	42.857	105	53	2	9	113	116	213	6.84e-23	96.3
MS.gene90771.t1	AT5G39660	42.857	105	53	2	9	113	116	213	6.84e-23	96.3
MS.gene90771.t1	AT5G39660	42.857	105	53	2	9	113	116	213	6.84e-23	96.3
MS.gene90771.t1	AT1G29160	66.667	54	18	0	32	85	62	115	7.68e-23	91.7
MS.gene90771.t1	AT5G62430	56.716	67	29	0	19	85	41	107	1.26e-22	93.6
MS.gene90771.t1	AT1G26790	57.143	70	28	1	18	85	95	164	1.29e-22	94.7
MS.gene90771.t1	AT1G47655	71.429	49	14	0	32	80	29	77	1.29e-22	91.7
MS.gene90771.t1	AT1G69570	66.667	54	18	0	32	85	132	185	1.30e-22	95.1
MS.gene90771.t1	AT4G21030	51.515	66	29	2	34	97	23	87	1.38e-13	67.4

Find 36 sgRNAs with CRISPR-Local

Find 64 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATCTTAGTGTTTGCATTAA+TGG	0.144786	8.1:-36688562	MS.gene90771:CDS
TGAAGAAGAGTACTTATTAA+TGG	0.299609	8.1:+36689170	None:intergenic
GAATTCTTATTCATCTGTTA+TGG	0.312133	8.1:-36688602	MS.gene90771:CDS
TCAAGATTCTGAAACAAAAT+AGG	0.312862	8.1:+36688709	None:intergenic
GCAAAACATGCAGAAGATAT+TGG	0.321728	8.1:-36689281	MS.gene90771:CDS
CTTTAGGGCAAAGCAGTATA+TGG	0.322395	8.1:+36688463	None:intergenic
AATGGTGATCATGATCAAAA+TGG	0.343971	8.1:-36688544	MS.gene90771:CDS
ATCAAAATGGTAACAACAAT+TGG	0.348472	8.1:-36688531	MS.gene90771:CDS
AACAACAATTGGATTAATAA+TGG	0.366146	8.1:-36688520	MS.gene90771:CDS
GGTGCAAGTGAATGGTTCTT+TGG	0.371222	8.1:-36688628	MS.gene90771:CDS
GAAGCTTCAAATGCAAATCT+TGG	0.372018	8.1:+36688824	None:intergenic
CCTTGTTTGAAGATAATAAC+AGG	0.384597	8.1:-36688783	MS.gene90771:CDS
TAATAATGGTGTTCATGCTT+GGG	0.391047	8.1:-36688506	MS.gene90771:CDS
TTTCAAGTTGGTGGTGGTGC+TGG	0.445544	8.1:-36688667	MS.gene90771:CDS
TGCAGAAGATATTGGACAAA+TGG	0.451403	8.1:-36689273	MS.gene90771:CDS
CTAAGATCAGTAGTTGTTGC+AGG	0.461438	8.1:+36688577	None:intergenic
TTAATAATGGTGTTCATGCT+TGG	0.476692	8.1:-36688507	MS.gene90771:CDS
TTTCTGAAGAAGAACCTTGT+TGG	0.485232	8.1:+36689415	None:intergenic
GAAAAGAAGGTGCAAGTGAA+TGG	0.503466	8.1:-36688636	MS.gene90771:CDS
GTGTTTGGAGAATCACATCT+TGG	0.505256	8.1:+36689354	None:intergenic
TTGCGTAACGTTCCGATAGG+TGG	0.519722	8.1:-36689243	MS.gene90771:CDS
TTCTGAAACAAAATAGGTTG+AGG	0.522960	8.1:+36688715	None:intergenic
TCAGAATCTTGAGATTTCAA+AGG	0.543309	8.1:-36688698	MS.gene90771:CDS
GCTGAGATGTTTCAAGTTGG+TGG	0.546166	8.1:-36688676	MS.gene90771:CDS
GATAATAACAGGAAAGAGAG+TGG	0.551054	8.1:-36688772	MS.gene90771:CDS
CGTAACGTTCCGATAGGTGG+TGG	0.551463	8.1:-36689240	MS.gene90771:CDS
CCTGTTATTATCTTCAAACA+AGG	0.552716	8.1:+36688783	None:intergenic
TTTCTGCAACCACCACCTAT+CGG	0.561402	8.1:+36689231	None:intergenic
GAGATGTTTCAAGTTGGTGG+TGG	0.563036	8.1:-36688673	MS.gene90771:CDS
TACTTATTAATGGCTTGAGA+TGG	0.577342	8.1:+36689180	None:intergenic
AAGGCTGAGATGTTTCAAGT+TGG	0.583200	8.1:-36688679	MS.gene90771:CDS
AATAATGGTGTTCATGCTTG+GGG	0.619834	8.1:-36688505	MS.gene90771:CDS
GCTGGTGATTCAAGAAAAGA+AGG	0.622592	8.1:-36688649	MS.gene90771:CDS
TCGTTGCGTAACGTTCCGAT+AGG	0.633139	8.1:-36689246	MS.gene90771:CDS
AGAAGATATTGGACAAATGG+TGG	0.635966	8.1:-36689270	MS.gene90771:CDS
CAAGATCATGAAAACCAACA+AGG	0.656147	8.1:-36689429	MS.gene90771:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AACAACAATTGGATTAATAA+TGG	-	chr8.1:36689401-36689420	MS.gene90771:CDS	20.0%
!!	AGGATATAATTTAAACCATT+TGG	+	chr8.1:36688932-36688951	None:intergenic	20.0%
!!	GAAAATTGGTTATAGTAAAA+TGG	+	chr8.1:36688840-36688859	None:intergenic	20.0%
!	AATTTAAACCATTTGGATCA+AGG	+	chr8.1:36688925-36688944	None:intergenic	25.0%
!	ATCAAAATGGTAACAACAAT+TGG	-	chr8.1:36689390-36689409	MS.gene90771:CDS	25.0%
!	GAATTCTTATTCATCTGTTA+TGG	-	chr8.1:36689319-36689338	MS.gene90771:CDS	25.0%
!!	TATAACCAATTTTCTTCCAT+TGG	-	chr8.1:36688846-36688865	MS.gene90771:intron	25.0%
!!	TTTTTGTTGATCTGTTATCT+TGG	+	chr8.1:36688532-36688551	None:intergenic	25.0%
!!!	TAAAATGGTTTTGAAGAGAA+GGG	+	chr8.1:36688825-36688844	None:intergenic	25.0%
!!!	TCAAGATTCTGAAACAAAAT+AGG	+	chr8.1:36689215-36689234	None:intergenic	25.0%
!!!	TGAAGAAGAGTACTTATTAA+TGG	+	chr8.1:36688754-36688773	None:intergenic	25.0%
	AAGGGTAATGATAAAGGTAA+GGG	+	chr8.1:36688807-36688826	None:intergenic	30.0%
	AATGGTGATCATGATCAAAA+TGG	-	chr8.1:36689377-36689396	MS.gene90771:CDS	30.0%
	CCTGTTATTATCTTCAAACA+AGG	+	chr8.1:36689141-36689160	None:intergenic	30.0%
	GATCTTAGTGTTTGCATTAA+TGG	-	chr8.1:36689359-36689378	MS.gene90771:CDS	30.0%
	GGAAATGAAAATGCAATTCA+AGG	-	chr8.1:36688988-36689007	MS.gene90771:intron	30.0%
	TAATAATGGTGTTCATGCTT+GGG	-	chr8.1:36689415-36689434	MS.gene90771:CDS	30.0%
	TACTTATTAATGGCTTGAGA+TGG	+	chr8.1:36688744-36688763	None:intergenic	30.0%
	TATCCTTTCTCTTCTTCAAA+TGG	-	chr8.1:36688946-36688965	MS.gene90771:intron	30.0%
	TCAGAATCTTGAGATTTCAA+AGG	-	chr8.1:36689223-36689242	MS.gene90771:CDS	30.0%
	TTAATAATGGTGTTCATGCT+TGG	-	chr8.1:36689414-36689433	MS.gene90771:CDS	30.0%
!	AATGGAGGTGGATTTATTAA+TGG	-	chr8.1:36688964-36688983	MS.gene90771:intron	30.0%
!	CCTTGTTTGAAGATAATAAC+AGG	-	chr8.1:36689138-36689157	MS.gene90771:intron	30.0%
!	GTATTGAATCATTGAGTTGT+AGG	-	chr8.1:36689072-36689091	MS.gene90771:intron	30.0%
!	TAGTAGCAGAATTTTGTGTT+TGG	+	chr8.1:36688585-36688604	None:intergenic	30.0%
!!	TTCTGAAACAAAATAGGTTG+AGG	+	chr8.1:36689209-36689228	None:intergenic	30.0%
!!!	GTAAAATGGTTTTGAAGAGA+AGG	+	chr8.1:36688826-36688845	None:intergenic	30.0%
	AATAATGGTGTTCATGCTTG+GGG	-	chr8.1:36689416-36689435	MS.gene90771:CDS	35.0%
	AGAAGATATTGGACAAATGG+TGG	-	chr8.1:36688651-36688670	MS.gene90771:CDS	35.0%
	CAAGATCATGAAAACCAACA+AGG	-	chr8.1:36688492-36688511	MS.gene90771:CDS	35.0%
	CCAAGATGAAAATCAAGTGA+AGG	+	chr8.1:36688777-36688796	None:intergenic	35.0%
	GAAGAGAAGGGTAATGATAA+AGG	+	chr8.1:36688813-36688832	None:intergenic	35.0%
	GAAGCTTCAAATGCAAATCT+TGG	+	chr8.1:36689100-36689119	None:intergenic	35.0%
	GAAGGGTAATGATAAAGGTA+AGG	+	chr8.1:36688808-36688827	None:intergenic	35.0%
	GATAATAACAGGAAAGAGAG+TGG	-	chr8.1:36689149-36689168	MS.gene90771:intron	35.0%
	GCAAAACATGCAGAAGATAT+TGG	-	chr8.1:36688640-36688659	MS.gene90771:CDS	35.0%
	TGCAGAAGATATTGGACAAA+TGG	-	chr8.1:36688648-36688667	MS.gene90771:CDS	35.0%
!	AACCAATTTTCTTCCATTGG+TGG	-	chr8.1:36688849-36688868	MS.gene90771:intron	35.0%
!	AGTTTTCACCTTGATCCAAA+TGG	-	chr8.1:36688914-36688933	MS.gene90771:intron	35.0%
!	CATGTTTTGCAGAAATGTCT+TGG	+	chr8.1:36688630-36688649	None:intergenic	35.0%
!	CCTTCACTTGATTTTCATCT+TGG	-	chr8.1:36688774-36688793	MS.gene90771:CDS	35.0%
!	TTTCTGAAGAAGAACCTTGT+TGG	+	chr8.1:36688509-36688528	None:intergenic	35.0%
!!	TTGGTTTTCATGATCTTGTG+TGG	+	chr8.1:36688490-36688509	None:intergenic	35.0%
!!!	TCTTGTGTGGTTTTGTGATT+TGG	+	chr8.1:36688477-36688496	None:intergenic	35.0%
	CCTCCATTTGAAGAAGAGAA+AGG	+	chr8.1:36688952-36688971	None:intergenic	40.0%
	CCTTTCTCTTCTTCAAATGG+AGG	-	chr8.1:36688949-36688968	MS.gene90771:intron	40.0%
	CTAAGATCAGTAGTTGTTGC+AGG	+	chr8.1:36689347-36689366	None:intergenic	40.0%
	CTCCACCAATGGAAGAAAAT+TGG	+	chr8.1:36688854-36688873	None:intergenic	40.0%
	GCTGGTGATTCAAGAAAAGA+AGG	-	chr8.1:36689272-36689291	MS.gene90771:CDS	40.0%
	GTGTTTGGAGAATCACATCT+TGG	+	chr8.1:36688570-36688589	None:intergenic	40.0%
	TGAACTTGAAACTCCACCAA+TGG	+	chr8.1:36688865-36688884	None:intergenic	40.0%
	TTCTCTTCTTCAAATGGAGG+TGG	-	chr8.1:36688952-36688971	MS.gene90771:intron	40.0%
!	AAGGCTGAGATGTTTCAAGT+TGG	-	chr8.1:36689242-36689261	MS.gene90771:CDS	40.0%
!	GAAAAGAAGGTGCAAGTGAA+TGG	-	chr8.1:36689285-36689304	MS.gene90771:CDS	40.0%
!	GGAGGTGGATTTATTAATGG+TGG	-	chr8.1:36688967-36688986	MS.gene90771:intron	40.0%
!	TGGAACTGTTTTGCTTTCTC+AGG	-	chr8.1:36689169-36689188	MS.gene90771:intron	40.0%
	GGTGCAAGTGAATGGTTCTT+TGG	-	chr8.1:36689293-36689312	MS.gene90771:CDS	45.0%
	TTTCTGCAACCACCACCTAT+CGG	+	chr8.1:36688693-36688712	None:intergenic	45.0%
!!	GAGATGTTTCAAGTTGGTGG+TGG	-	chr8.1:36689248-36689267	MS.gene90771:CDS	45.0%
!!	GCTGAGATGTTTCAAGTTGG+TGG	-	chr8.1:36689245-36689264	MS.gene90771:CDS	45.0%
	TCGTTGCGTAACGTTCCGAT+AGG	-	chr8.1:36688675-36688694	MS.gene90771:CDS	50.0%
	TTGCGTAACGTTCCGATAGG+TGG	-	chr8.1:36688678-36688697	MS.gene90771:CDS	50.0%
!!	TTTCAAGTTGGTGGTGGTGC+TGG	-	chr8.1:36689254-36689273	MS.gene90771:CDS	50.0%
	CGTAACGTTCCGATAGGTGG+TGG	-	chr8.1:36688681-36688700	MS.gene90771:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	36688465	36689478	36688465	ID=MS.gene90771
chr8.1	mRNA	36688465	36689478	36688465	ID=MS.gene90771.t1;Parent=MS.gene90771
chr8.1	exon	36689183	36689478	36689183	ID=MS.gene90771.t1.exon1;Parent=MS.gene90771.t1
chr8.1	CDS	36689183	36689478	36689183	ID=cds.MS.gene90771.t1;Parent=MS.gene90771.t1
chr8.1	exon	36688465	36688849	36688465	ID=MS.gene90771.t1.exon2;Parent=MS.gene90771.t1
chr8.1	CDS	36688465	36688849	36688465	ID=cds.MS.gene90771.t1;Parent=MS.gene90771.t1

Gene Sequence

>MS.gene90771

ATGGTGGCACCAAATCACAAAACCACACAAGATCATGAAAACCAACAAGGTTCTTCTTCAGAAACCAAGATAACAGATCAACAAAAAGTTGCAGTAAAATGTCCAAGATGTGATTCTCCAAACACAAAATTCTGCTACTACAACAACTACAGTCTCACTCAACCAAGACATTTCTGCAAAACATGCAGAAGATATTGGACAAATGGTGGATCGTTGCGTAACGTTCCGATAGGTGGTGGTTGCAGAAAGAAACAAAAACTCAAACACTCATCTACACCATCTCAAGCCATTAATAAGTACTCTTCTTCACCTTCACTTGATTTTCATCTTGGTTCTTTACCCTTACCTTTATCATTACCCTTCTCTTCAAAACCATTTTACTATAACCAATTTTCTTCCATTGGTGGAGTTTCAAGTTCAAACACTTGTGTTTCTACTCAAGTGCTTCAAGTTTTCACCTTGATCCAAATGGTTTAAATTATATCCTTTCTCTTCTTCAAATGGAGGTGGATTTATTAATGGTGGAAATGAAAATGCAATTCAAGGAATGAACTTATGAATGTGAGTACTAGTGCTAATAATGCTAATTGCACTAGTCTTGCTTCTAGTATTGAATCATTGAGTTGTAGGAACCAAGATTTGCATTTGAAGCTTCAGCAGCAGAGATTAGCAACCTTGTTTGAAGATAATAACAGGAAAGAGAGTGGAACTGTTTTGCTTTCTCAGGTTAGCATTGAAAAGCCTCAACCTATTTTGTTTCAGAATCTTGAGATTTCAAAGGCTGAGATGTTTCAAGTTGGTGGTGGTGCTGGTGATTCAAGAAAAGAAGGTGCAAGTGAATGGTTCTTTGGTATGAATTCTTATTCATCTGTTATGGCTCCTGCAACAACTACTGATCTTAGTGTTTGCATTAATGGTGATCATGATCAAAATGGTAACAACAATTGGATTAATAATGGTGTTCATGCTTGGGGTGATGTGCAGCAGCAGCAACCATATACTGCTTTGCCCTAA

Protein sequence

>MS.gene90771.t1

MVAPNHKTTQDHENQQGSSSETKITDQQKVAVKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTNGGSLRNVPIGGGCRKKQKLKHSSTPSQAINKNQDLHLKLQQQRLATLFEDNNRKESGTVLLSQVSIEKPQPILFQNLEISKAEMFQVGGGAGDSRKEGASEWFFGMNSYSSVMAPATTTDLSVCINGDHDQNGNNNWINNGVHAWGDVQQQQPYTALP